Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:31:09 (2425555): wrapper (7.7.26015): starting
16:31:09 (2425555): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 16:31:09] Arguments: --nthreads 8
[2026-03-18 16:31:09] Threads: 8
[2026-03-18 16:31:09] Checking for CVMFS
[2026-03-18 16:31:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 16:31:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 16:31:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 16:31:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 16:31:10] 2.13.3.0 15397 191674 275244 157429 2 654 32365962 32935936 36180 16776704 0 1329195269 99.569 1487014859 35015 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-18 16:31:10] CVMFS is ok
[2026-03-18 16:31:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 16:31:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 16:31:10] Further information can be found at the LHC@home message board.
[2026-03-18 16:31:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 16:31:10] Checking for apptainer binary...
[2026-03-18 16:31:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 16:31:10] Running /usr/bin/apptainer --version
[2026-03-18 16:31:10] apptainer version 1.4.5-2.el9
[2026-03-18 16:31:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 16:31:10] c7-16-8.aglt2.org
[2026-03-18 16:31:10] apptainer works
[2026-03-18 16:31:10] Set ATHENA_PROC_NUMBER=8
[2026-03-18 16:31:10] Set ATHENA_CORE_NUMBER=8
[2026-03-18 16:31:10] Starting ATLAS job with PandaID=7058767090
[2026-03-18 16:31:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:20:06 (2425555): BOINC client no longer exists - exiting
17:20:06 (2425555): timer handler: client dead, exiting
18:11:37 (2792704): wrapper (7.7.26015): starting
18:11:37 (2792704): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 18:11:37] Arguments: --nthreads 8
[2026-03-18 18:11:37] Threads: 8
[2026-03-18 18:11:37] This job has been restarted, cleaning up previous attempt
[2026-03-18 18:11:37] Checking for CVMFS
[2026-03-18 18:11:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 18:11:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 18:11:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 18:11:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 18:11:39] 2.13.3.0 15397 191774 243944 157430 2 647 20446991 32935936 37974 16776704 0 1329758024 99.568 1488288837 34992 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-18 18:11:39] CVMFS is ok
[2026-03-18 18:11:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 18:11:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 18:11:40] Further information can be found at the LHC@home message board.
[2026-03-18 18:11:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 18:11:40] Checking for apptainer binary...
[2026-03-18 18:11:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 18:11:40] Running /usr/bin/apptainer --version
[2026-03-18 18:11:40] apptainer version 1.4.5-2.el9
[2026-03-18 18:11:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 18:11:40] c7-16-8.aglt2.org
[2026-03-18 18:11:40] apptainer works
[2026-03-18 18:11:40] Set ATHENA_PROC_NUMBER=8
[2026-03-18 18:11:40] Set ATHENA_CORE_NUMBER=8
[2026-03-18 18:11:41] Starting ATLAS job with PandaID=7058767090
[2026-03-18 18:11:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 00:37:34]  *** The last 200 lines of the pilot log: ***
[2026-03-19 00:37:34] 2026-03-19 04:36:57,053 | INFO     | fitting pss+swap vs Time
[2026-03-19 00:37:34] 2026-03-19 04:36:57,054 | INFO     | sum of square deviations: 16615428507.755903
[2026-03-19 00:37:34] 2026-03-19 04:36:57,097 | INFO     | sum of deviations: 129511743653.98936
[2026-03-19 00:37:34] 2026-03-19 04:36:57,098 | INFO     | mean x: 1773883479.2785146
[2026-03-19 00:37:34] 2026-03-19 04:36:57,098 | INFO     | mean y: 2479588.8381962865
[2026-03-19 00:37:34] 2026-03-19 04:36:57,098 | INFO     | intersect: -13824352643.212044
[2026-03-19 00:37:34] 2026-03-19 04:36:57,098 | INFO     | chi2: 5.206050391497505
[2026-03-19 00:37:34] 2026-03-19 04:36:57,099 | INFO     | sum of square deviations: 15963113417.362913
[2026-03-19 00:37:34] 2026-03-19 04:36:57,135 | INFO     | sum of deviations: 127874480314.00795
[2026-03-19 00:37:34] 2026-03-19 04:36:57,135 | INFO     | mean x: 1773883326.782258
[2026-03-19 00:37:34] 2026-03-19 04:36:57,136 | INFO     | mean y: 2479206.061827957
[2026-03-19 00:37:34] 2026-03-19 04:36:57,136 | INFO     | intersect: -14207431017.544008
[2026-03-19 00:37:34] 2026-03-19 04:36:57,136 | INFO     | chi2: 5.209241425505401
[2026-03-19 00:37:34] 2026-03-19 04:36:57,136 | INFO     | current chi2=5.209241425505401 (change=-0.06129471994946113 %)
[2026-03-19 00:37:34] 2026-03-19 04:36:57,136 | INFO     | right removable region: 371
[2026-03-19 00:37:34] 2026-03-19 04:36:57,137 | INFO     | sum of square deviations: 15963049367.362913
[2026-03-19 00:37:34] 2026-03-19 04:36:57,149 | INFO     | sum of deviations: 12890388924.701561
[2026-03-19 00:37:34] 2026-03-19 04:36:57,149 | INFO     | mean x: 1773883631.782258
[2026-03-19 00:37:34] 2026-03-19 04:36:57,149 | INFO     | mean y: 2506826.7123655914
[2026-03-19 00:37:34] 2026-03-19 04:36:57,149 | INFO     | intersect: -1429929382.3484135
[2026-03-19 00:37:34] 2026-03-19 04:36:57,150 | INFO     | chi2: 1.554839904512195
[2026-03-19 00:37:34] 2026-03-19 04:36:57,150 | INFO     | current chi2=1.554839904512195 (change=70.13398281638703 %)
[2026-03-19 00:37:34] 2026-03-19 04:36:57,163 | INFO     | sum of square deviations: 15327972876.95909
[2026-03-19 00:37:34] 2026-03-19 04:36:57,166 | INFO     | sum of deviations: -52988104027.40601
[2026-03-19 00:37:34] 2026-03-19 04:36:57,166 | INFO     | mean x: 1773883784.2861035
[2026-03-19 00:37:34] 2026-03-19 04:36:57,166 | INFO     | mean y: 2522605.8419618527
[2026-03-19 00:37:34] 2026-03-19 04:36:57,166 | INFO     | intersect: 6134758045.504893
[2026-03-19 00:37:34] 2026-03-19 04:36:57,190 | INFO     | chi2: 0.2927923040982367
[2026-03-19 00:37:34] 2026-03-19 04:36:57,190 | INFO     | current chi2=0.2927923040982367 (change=81.16897416585822 %)
[2026-03-19 00:37:34] 2026-03-19 04:36:57,190 | INFO     | sum of square deviations: 14709988616.621561
[2026-03-19 00:37:34] 2026-03-19 04:36:57,197 | INFO     | sum of deviations: -70189918801.6215
[2026-03-19 00:37:34] 2026-03-19 04:36:57,198 | INFO     | mean x: 1773883936.7872927
[2026-03-19 00:37:34] 2026-03-19 04:36:57,198 | INFO     | mean y: 2526834.2127071824
[2026-03-19 00:37:34] 2026-03-19 04:36:57,198 | INFO     | intersect: 8466759725.998362
[2026-03-19 00:37:34] 2026-03-19 04:36:57,198 | INFO     | chi2: 0.17163847367737595
[2026-03-19 00:37:34] 2026-03-19 04:36:57,199 | INFO     | current chi2=0.17163847367737595 (change=41.37876191589094 %)
[2026-03-19 00:37:34] 2026-03-19 04:36:57,199 | INFO     | sum of square deviations: 14108842003.282953
[2026-03-19 00:37:34] 2026-03-19 04:36:57,235 | INFO     | sum of deviations: -66978083523.81795
[2026-03-19 00:37:34] 2026-03-19 04:36:57,236 | INFO     | mean x: 1773884089.2885153
[2026-03-19 00:37:34] 2026-03-19 04:36:57,236 | INFO     | mean y: 2526009.532212885
[2026-03-19 00:37:34] 2026-03-19 04:36:57,236 | INFO     | intersect: 8423582582.870548
[2026-03-19 00:37:34] 2026-03-19 04:36:57,236 | INFO     | chi2: 0.16141851885074054
[2026-03-19 00:37:34] 2026-03-19 04:36:57,236 | INFO     | current chi2=0.16141851885074054 (change=5.95434963249881 %)
[2026-03-19 00:37:34] 2026-03-19 04:36:57,237 | INFO     | left removable region: 40
[2026-03-19 00:37:34] 2026-03-19 04:36:57,237 | INFO     | sum of square deviations: 11245372434.9849
[2026-03-19 00:37:34] 2026-03-19 04:36:57,258 | INFO     | sum of deviations: -28740682419.35046
[2026-03-19 00:37:34] 2026-03-19 04:36:57,258 | INFO     | mean x: 1773884516.2960725
[2026-03-19 00:37:34] 2026-03-19 04:36:57,258 | INFO     | mean y: 2515818.2688821754
[2026-03-19 00:37:34] 2026-03-19 04:36:57,258 | INFO     | intersect: 4536171935.593998
[2026-03-19 00:37:34] 2026-03-19 04:36:57,259 | INFO     | chi2: 0.10153883212614874
[2026-03-19 00:37:34] 2026-03-19 04:36:57,280 | INFO     | current memory leak: -2.56 B/s (using 331 data points, chi2=0.10)
[2026-03-19 00:37:34] 2026-03-19 04:36:57,282 | INFO     | could have reported an average CPU frequency of 3134 MHz (16 samples)
[2026-03-19 00:37:34] 2026-03-19 04:36:57,282 | INFO     | ..............................
[2026-03-19 00:37:34] 2026-03-19 04:36:57,282 | INFO     | . Timing measurements:
[2026-03-19 00:37:34] 2026-03-19 04:36:57,282 | INFO     | . get job = 0 s
[2026-03-19 00:37:34] 2026-03-19 04:36:57,282 | INFO     | . initial setup = 5 s
[2026-03-19 00:37:34] 2026-03-19 04:36:57,282 | INFO     | . payload setup = 31 s
[2026-03-19 00:37:34] 2026-03-19 04:36:57,282 | INFO     | . stage-in = 0 s
[2026-03-19 00:37:34] 2026-03-19 04:36:57,282 | INFO     | . payload execution = 23007 s
[2026-03-19 00:37:34] 2026-03-19 04:36:57,283 | INFO     | . stage-out = 2 s
[2026-03-19 00:37:34] 2026-03-19 04:36:57,283 | INFO     | . log creation = 0 s
[2026-03-19 00:37:34] 2026-03-19 04:36:57,283 | INFO     | ..............................
[2026-03-19 00:37:34] 2026-03-19 04:36:57,818 | INFO     | 
[2026-03-19 00:37:34] 2026-03-19 04:36:57,818 | INFO     | job summary report
[2026-03-19 00:37:34] 2026-03-19 04:36:57,818 | INFO     | --------------------------------------------------
[2026-03-19 00:37:34] 2026-03-19 04:36:57,819 | INFO     | PanDA job id: 7058767090
[2026-03-19 00:37:34] 2026-03-19 04:36:57,819 | INFO     | task id: 49176756
[2026-03-19 00:37:34] 2026-03-19 04:36:57,819 | INFO     | errors: (none)
[2026-03-19 00:37:34] 2026-03-19 04:36:57,819 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 00:37:34] 2026-03-19 04:36:57,819 | INFO     | pilot state: finished 
[2026-03-19 00:37:34] 2026-03-19 04:36:57,819 | INFO     | transexitcode: 0
[2026-03-19 00:37:34] 2026-03-19 04:36:57,819 | INFO     | exeerrorcode: 0
[2026-03-19 00:37:34] 2026-03-19 04:36:57,819 | INFO     | exeerrordiag: 
[2026-03-19 00:37:34] 2026-03-19 04:36:57,819 | INFO     | exitcode: 0
[2026-03-19 00:37:34] 2026-03-19 04:36:57,819 | INFO     | exitmsg: OK
[2026-03-19 00:37:34] 2026-03-19 04:36:57,819 | INFO     | cpuconsumptiontime: 65816 s
[2026-03-19 00:37:34] 2026-03-19 04:36:57,819 | INFO     | nevents: 400
[2026-03-19 00:37:34] 2026-03-19 04:36:57,819 | INFO     | neventsw: 0
[2026-03-19 00:37:34] 2026-03-19 04:36:57,819 | INFO     | pid: 2807334
[2026-03-19 00:37:34] 2026-03-19 04:36:57,820 | INFO     | pgrp: 2807334
[2026-03-19 00:37:34] 2026-03-19 04:36:57,820 | INFO     | corecount: 8
[2026-03-19 00:37:34] 2026-03-19 04:36:57,820 | INFO     | event service: False
[2026-03-19 00:37:34] 2026-03-19 04:36:57,820 | INFO     | sizes: {0: 2279832, 1: 2280236, 12: 2280236, 23042: 2314760, 23043: 2314759, 23046: 2323813, 23050: 2323997, 23053: 2324191}
[2026-03-19 00:37:34] 2026-03-19 04:36:57,820 | INFO     | --------------------------------------------------
[2026-03-19 00:37:34] 2026-03-19 04:36:57,820 | INFO     | 
[2026-03-19 00:37:34] 2026-03-19 04:36:57,820 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-19 00:37:34] 2026-03-19 04:36:57,982 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,982 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,983 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,983 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,983 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,983 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,983 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,983 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,983 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,983 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,983 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,983 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,983 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,984 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,984 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,984 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,984 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,984 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 00:37:34] 2026-03-19 04:36:57,984 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,984 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 00:37:34] 2026-03-19 04:36:57,984 | INFO     | job 7058767090 has completed (purged errors)
[2026-03-19 00:37:34] 2026-03-19 04:36:57,985 | INFO     | overall cleanup function is called
[2026-03-19 00:37:34] 2026-03-19 04:36:58,439 | INFO     | PID=2801179 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-19 00:37:34] 2026-03-19 04:36:58,440 | INFO     | .. there are 45 such processes running
[2026-03-19 00:37:34] 2026-03-19 04:36:58,993 | INFO     | --- collectZombieJob: --- 10, [2807334]
[2026-03-19 00:37:34] 2026-03-19 04:36:58,993 | INFO     | zombie collector waiting for pid 2807334
[2026-03-19 00:37:34] 2026-03-19 04:36:58,994 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 00:37:34] 2026-03-19 04:36:58,994 | INFO     | collected zombie processes
[2026-03-19 00:37:34] 2026-03-19 04:36:58,994 | INFO     | will attempt to kill all subprocesses of pid=2807334
[2026-03-19 00:37:34] 2026-03-19 04:36:59,819 | INFO     | process IDs to be killed: [2807334] (in reverse order)
[2026-03-19 00:37:34] 2026-03-19 04:37:00,366 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 00:37:34] 2026-03-19 04:37:00,367 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 00:37:34] 2026-03-19 04:37:00,483 | INFO     | did not find any defunct processes belonging to 2807334
[2026-03-19 00:37:34] 2026-03-19 04:37:00,621 | INFO     | did not find any defunct processes belonging to 2807334
[2026-03-19 00:37:34] 2026-03-19 04:37:00,621 | INFO     | ready for new job
[2026-03-19 00:37:34] 2026-03-19 04:37:00,621 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 00:37:34] 2026-03-19 04:37:00,647 | INFO     | **************************************
[2026-03-19 00:37:34] 2026-03-19 04:37:00,647 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 00:37:34] 2026-03-19 04:37:00,648 | INFO     | **************************************
[2026-03-19 00:37:34] 2026-03-19 04:37:00,648 | INFO     | 
[2026-03-19 00:37:34] 2026-03-19 04:37:00,680 | INFO     | architecture information:
[2026-03-19 00:37:34] 2026-03-19 04:37:00,700 | INFO     | executing command: cat /etc/os-release
[2026-03-19 00:37:34] 2026-03-19 04:37:00,818 | INFO     | cat /etc/os-release:
[2026-03-19 00:37:34] NAME="CentOS Linux"
[2026-03-19 00:37:34] VERSION="7 (Core)"
[2026-03-19 00:37:34] ID="centos"
[2026-03-19 00:37:34] ID_LIKE="rhel fedora"
[2026-03-19 00:37:34] VERSION_ID="7"
[2026-03-19 00:37:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 00:37:34] ANSI_COLOR="0;31"
[2026-03-19 00:37:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 00:37:34] HOME_URL="https://www.centos.org/"
[2026-03-19 00:37:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 00:37:34] 
[2026-03-19 00:37:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 00:37:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 00:37:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 00:37:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 00:37:34] 
[2026-03-19 00:37:34] 2026-03-19 04:37:00,818 | INFO     | **************************************
[2026-03-19 00:37:34] 2026-03-19 04:37:01,321 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-19 00:37:34] 2026-03-19 04:37:01,387 | INFO     | sufficient remaining disk space (73862742016 B)
[2026-03-19 00:37:34] 2026-03-19 04:37:01,387 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 00:37:34] 2026-03-19 04:37:01,387 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 00:37:34] 2026-03-19 04:37:01,387 | INFO     | update_server=False
[2026-03-19 00:37:34] 2026-03-19 04:37:01,388 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 00:37:34] 2026-03-19 04:37:01,395 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 00:37:34] 2026-03-19 04:37:01,395 | INFO     | aborting loop
[2026-03-19 00:37:34] 2026-03-19 04:37:01,396 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 00:37:34] 2026-03-19 04:37:01,490 | INFO     | all data control threads have been joined
[2026-03-19 00:37:34] 2026-03-19 04:37:01,743 | INFO     | all payload control threads have been joined
[2026-03-19 00:37:34] 2026-03-19 04:37:02,185 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 00:37:34] 2026-03-19 04:37:02,393 | INFO     | [job] retrieve thread has finished
[2026-03-19 00:37:34] 2026-03-19 04:37:02,401 | INFO     | [job] job monitor thread has finished
[2026-03-19 00:37:34] 2026-03-19 04:37:02,496 | INFO     | [data] control thread has finished
[2026-03-19 00:37:34] 2026-03-19 04:37:02,725 | INFO     | [payload] failed_post thread has finished
[2026-03-19 00:37:34] 2026-03-19 04:37:02,749 | INFO     | [payload] control thread has finished
[2026-03-19 00:37:34] 2026-03-19 04:37:02,847 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 00:37:34] 2026-03-19 04:37:02,900 | INFO     | all job control threads have been joined
[2026-03-19 00:37:34] 2026-03-19 04:37:03,190 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 00:37:34] 2026-03-19 04:37:03,191 | INFO     | [job] validate thread has finished
[2026-03-19 00:37:34] 2026-03-19 04:37:03,194 | INFO     | [data] copytool_in thread has finished
[2026-03-19 00:37:34] 2026-03-19 04:37:03,242 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 00:37:34] 2026-03-19 04:37:03,311 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 00:37:34] 2026-03-19 04:37:03,353 | INFO     | [payload] validate_post thread has finished
[2026-03-19 00:37:34] 2026-03-19 04:37:03,853 | INFO     | [job] queue monitor thread has finished
[2026-03-19 00:37:34] 2026-03-19 04:37:03,906 | INFO     | [job] control thread has finished
[2026-03-19 00:37:34] 2026-03-19 04:37:04,195 | INFO     | [data] copytool_out thread has finished
[2026-03-19 00:37:34] 2026-03-19 04:37:05,405 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 00:37:34] 2026-03-19 04:37:11,755 | INFO     | job.realtimelogging is not enabled
[2026-03-19 00:37:34] 2026-03-19 04:37:12,761 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 00:37:34] 2026-03-19 04:37:13,075 | INFO     | [monitor] cgroup control has ended
[2026-03-19 00:37:34] 2026-03-19 04:37:13,467 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139862787970880)>', '<ExcThread(monitor, started 139862288086784)>']
[2026-03-19 00:37:34] 2026-03-19 04:37:18,493 | INFO     | all workflow threads have been joined
[2026-03-19 00:37:34] 2026-03-19 04:37:18,494 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 00:37:34] 2026-03-19 04:37:18,494 | INFO     | traces error code: 0
[2026-03-19 00:37:34] 2026-03-19 04:37:18,494 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 00:37:34] 2026-03-19 04:37:32,906 | INFO     | PID=2801179 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 00:37:34] 2026-03-19 04:37:32,907 | INFO     | .. there are 45 such processes running
[2026-03-19 00:37:34] 2026-03-19 04:37:32,907 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 00:37:34] 2026-03-19 04:37:32,907 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 00:37:34] 2026-03-19 04:37:32,907 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 00:37:34] 2026-03-19 04:37:32,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 00:37:34] 2026-03-19 04:37:32,907 | INFO     | [monitor] control thread has ended
[2026-03-19 00:37:34] 2026-03-19 04:37:33,410 [wrapper] ==== pilot stdout END ====
[2026-03-19 00:37:34] 2026-03-19 04:37:33,426 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 00:37:34] 2026-03-19 04:37:33,432 [wrapper] pilotpid: 2801179
[2026-03-19 00:37:34] 2026-03-19 04:37:33,437 [wrapper] Pilot exit status: 0
[2026-03-19 00:37:34] 2026-03-19 04:37:33,489 [wrapper] pandaids: 7058767090 7058767090
[2026-03-19 00:37:34] 2026-03-19 04:37:33,632 [wrapper] cleanup supervisor_pilot 4028663 2801180
[2026-03-19 00:37:34] 2026-03-19 04:37:33,652 [wrapper] Test setup, not cleaning
[2026-03-19 00:37:34] 2026-03-19 04:37:33,666 [wrapper] apfmon messages muted
[2026-03-19 00:37:34] 2026-03-19 04:37:33,676 [wrapper] ==== wrapper stdout END ====
[2026-03-19 00:37:34] 2026-03-19 04:37:33,695 [wrapper] ==== wrapper stderr END ====
[2026-03-19 00:37:34]  *** Error codes and diagnostics ***
[2026-03-19 00:37:34]     "exeErrorCode": 0,
[2026-03-19 00:37:34]     "exeErrorDiag": "",
[2026-03-19 00:37:34]     "pilotErrorCode": 0,
[2026-03-19 00:37:34]     "pilotErrorDiag": "",
[2026-03-19 00:37:34]  *** Listing of results directory ***
[2026-03-19 00:37:34] total 663556
[2026-03-19 00:37:34] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-19 00:37:34] -rw-r--r--. 1 boincer umatlas    585013 Mar 18 09:20 pilot3.tar.gz
[2026-03-19 00:37:34] -rwx------. 1 boincer umatlas     36322 Mar 18 09:20 runpilot2-wrapper.sh
[2026-03-19 00:37:34] -rw-r--r--. 1 boincer umatlas      5111 Mar 18 09:22 queuedata.json
[2026-03-19 00:37:34] -rw-r--r--. 1 boincer umatlas       100 Mar 18 16:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 00:37:34] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 18 16:31 run_atlas
[2026-03-19 00:37:34] -rw-r--r--. 1 boincer umatlas       105 Mar 18 16:31 job.xml
[2026-03-19 00:37:34] -rw-r--r--. 3 boincer umatlas 233882186 Mar 18 16:31 EVNT.49135115._000003.pool.root.1
[2026-03-19 00:37:34] -rw-r--r--. 3 boincer umatlas 233882186 Mar 18 16:31 ATLAS.root_0
[2026-03-19 00:37:34] -rw-r--r--. 2 boincer umatlas     15845 Mar 18 16:31 start_atlas.sh
[2026-03-19 00:37:34] drwxrwx--x. 2 boincer umatlas      4096 Mar 18 16:31 shared
[2026-03-19 00:37:34] -rw-r--r--. 2 boincer umatlas    597547 Mar 18 16:31 input.tar.gz
[2026-03-19 00:37:34] -rw-r--r--. 1 boincer umatlas         0 Mar 18 16:31 boinc_lockfile
[2026-03-19 00:37:34] -rw-r--r--. 1 boincer umatlas      2621 Mar 18 18:11 pandaJob.out
[2026-03-19 00:37:34] -rw-------. 1 boincer umatlas        57 Mar 18 18:11 setup.sh.local
[2026-03-19 00:37:34] -rw-------. 1 boincer umatlas   1010366 Mar 18 18:12 agis_schedconf.cvmfs.json
[2026-03-19 00:37:34] -rw-------. 1 boincer umatlas       429 Mar 18 18:12 workernode_map.json
[2026-03-19 00:37:34] -rw-r--r--. 1 boincer umatlas      6947 Mar 19 00:28 init_data.xml
[2026-03-19 00:37:34] -rw-------. 1 boincer umatlas 201126426 Mar 19 00:35 HITS.49176756._000074.pool.root.1
[2026-03-19 00:37:34] -rw-r--r--. 1 boincer umatlas       530 Mar 19 00:36 boinc_task_state.xml
[2026-03-19 00:37:34] -rw-------. 1 boincer umatlas      1043 Mar 19 00:36 memory_monitor_summary.json
[2026-03-19 00:37:34] -rw-------. 1 boincer umatlas        97 Mar 19 00:36 pilot_heartbeat.json
[2026-03-19 00:37:34] -rw-------. 1 boincer umatlas   1511579 Mar 19 00:36 agis_ddmendpoints.agis.ALL.json
[2026-03-19 00:37:34] -rw-------. 1 boincer umatlas    569290 Mar 19 00:36 log.49176756._000074.job.log.tgz.1
[2026-03-19 00:37:34] -rw-------. 1 boincer umatlas      6342 Mar 19 00:36 heartbeat.json
[2026-03-19 00:37:34] -rw-r--r--. 1 boincer umatlas      8192 Mar 19 00:37 boinc_mmap_file
[2026-03-19 00:37:34] -rw-r--r--. 1 boincer umatlas        28 Mar 19 00:37 wrapper_checkpoint.txt
[2026-03-19 00:37:34] -rw-------. 1 boincer umatlas       823 Mar 19 00:37 pilotlog.txt
[2026-03-19 00:37:34] -rw-------. 1 boincer umatlas   2749137 Mar 19 00:37 log.49176756._000074.job.log.1
[2026-03-19 00:37:34] -rw-------. 1 boincer umatlas       357 Mar 19 00:37 output.list
[2026-03-19 00:37:34] -rw-r--r--. 1 boincer umatlas       620 Mar 19 00:37 runtime_log
[2026-03-19 00:37:34] -rw-------. 1 boincer umatlas   3338240 Mar 19 00:37 result.tar.gz
[2026-03-19 00:37:34] -rw-r--r--. 1 boincer umatlas      9422 Mar 19 00:37 runtime_log.err
[2026-03-19 00:37:34] -rw-------. 1 boincer umatlas       787 Mar 19 00:37 REQNDmT05M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmGCzLDmSrbW7m.diag
[2026-03-19 00:37:34] -rw-r--r--. 1 boincer umatlas     23412 Mar 19 00:37 stderr.txt
[2026-03-19 00:37:34] HITS file was successfully produced:
[2026-03-19 00:37:34] -rw-------. 1 boincer umatlas 201126426 Mar 19 00:35 shared/HITS.pool.root.1
[2026-03-19 00:37:34]  *** Contents of shared directory: ***
[2026-03-19 00:37:34] total 428688
[2026-03-19 00:37:34] -rw-r--r--. 3 boincer umatlas 233882186 Mar 18 16:31 ATLAS.root_0
[2026-03-19 00:37:34] -rw-r--r--. 2 boincer umatlas     15845 Mar 18 16:31 start_atlas.sh
[2026-03-19 00:37:34] -rw-r--r--. 2 boincer umatlas    597547 Mar 18 16:31 input.tar.gz
[2026-03-19 00:37:34] -rw-------. 1 boincer umatlas 201126426 Mar 19 00:35 HITS.pool.root.1
[2026-03-19 00:37:34] -rw-------. 1 boincer umatlas   3338240 Mar 19 00:37 result.tar.gz
00:37:35 (2792704): run_atlas exited; CPU time 66834.776642
00:37:35 (2792704): called boinc_finish(0)

</stderr_txt>
]]>

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