Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:29:20 (1016346): wrapper (7.7.26015): starting
16:29:20 (1016346): wrapper: running run_atlas (--nthreads 3)
[2026-03-19 16:29:20] Arguments: --nthreads 3
[2026-03-19 16:29:20] Threads: 3
[2026-03-19 16:29:20] Checking for CVMFS
[2026-03-19 16:29:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 16:29:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 16:29:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 16:29:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 16:29:43] 2.9.2.0 696138 4255 63768 157458 2 50 19012686 36864000 0 130560 0 1043917 99.972 155050 13858 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-19 16:29:43] CVMFS is ok
[2026-03-19 16:29:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 16:29:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 16:29:43] Further information can be found at the LHC@home message board.
[2026-03-19 16:29:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 16:29:43] Checking for apptainer binary...
[2026-03-19 16:29:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 16:29:43] Running /usr/bin/apptainer --version
[2026-03-19 16:29:43] apptainer version 1.4.1-1.1
[2026-03-19 16:29:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 16:29:44] magicA252a
[2026-03-19 16:29:44] apptainer works
[2026-03-19 16:29:44] Set ATHENA_PROC_NUMBER=3
[2026-03-19 16:29:44] Set ATHENA_CORE_NUMBER=3
[2026-03-19 16:29:44] Starting ATLAS job with PandaID=7043151915
[2026-03-19 16:29:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 17:56:34]  *** The last 200 lines of the pilot log: ***
[2026-03-19 17:56:34] 2026-03-19 16:56:02,670 | INFO     | **************************************
[2026-03-19 17:56:34] 2026-03-19 16:56:02,670 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 17:56:34] 2026-03-19 16:56:02,670 | INFO     | **************************************
[2026-03-19 17:56:34] 2026-03-19 16:56:02,670 | INFO     | 
[2026-03-19 17:56:34] 2026-03-19 16:56:02,670 | INFO     | architecture information:
[2026-03-19 17:56:34] 2026-03-19 16:56:02,671 | INFO     | executing command: cat /etc/os-release
[2026-03-19 17:56:34] 2026-03-19 16:56:02,680 | INFO     | cat /etc/os-release:
[2026-03-19 17:56:34] NAME="CentOS Linux"
[2026-03-19 17:56:34] VERSION="7 (Core)"
[2026-03-19 17:56:34] ID="centos"
[2026-03-19 17:56:34] ID_LIKE="rhel fedora"
[2026-03-19 17:56:34] VERSION_ID="7"
[2026-03-19 17:56:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 17:56:34] ANSI_COLOR="0;31"
[2026-03-19 17:56:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 17:56:34] HOME_URL="https://www.centos.org/"
[2026-03-19 17:56:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 17:56:34] 
[2026-03-19 17:56:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 17:56:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 17:56:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 17:56:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 17:56:34] 
[2026-03-19 17:56:34] 2026-03-19 16:56:02,680 | INFO     | **************************************
[2026-03-19 17:56:34] 2026-03-19 16:56:03,183 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-19 17:56:34] 2026-03-19 16:56:03,198 | INFO     | sufficient remaining disk space (342140911616 B)
[2026-03-19 17:56:34] 2026-03-19 16:56:03,198 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 17:56:34] 2026-03-19 16:56:03,198 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 17:56:34] 2026-03-19 16:56:03,198 | INFO     | update_server=False
[2026-03-19 17:56:34] 2026-03-19 16:56:03,198 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 17:56:34] 2026-03-19 16:56:03,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 17:56:34] 2026-03-19 16:56:03,329 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 17:56:34] 2026-03-19 16:56:03,695 | INFO     | all data control threads have been joined
[2026-03-19 17:56:34] 2026-03-19 16:56:04,136 | INFO     | all job control threads have been joined
[2026-03-19 17:56:34] 2026-03-19 16:56:04,204 | INFO     | [job] retrieve thread has finished
[2026-03-19 17:56:34] 2026-03-19 16:56:04,220 | INFO     | [payload] validate_post thread has finished
[2026-03-19 17:56:34] 2026-03-19 16:56:04,373 | INFO     | [data] copytool_in thread has finished
[2026-03-19 17:56:34] 2026-03-19 16:56:04,393 | INFO     | [payload] failed_post thread has finished
[2026-03-19 17:56:34] 2026-03-19 16:56:04,485 | INFO     | all payload control threads have been joined
[2026-03-19 17:56:34] 2026-03-19 16:56:04,499 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 17:56:34] 2026-03-19 16:56:04,701 | INFO     | [data] control thread has finished
[2026-03-19 17:56:34] 2026-03-19 16:56:05,012 | WARNING  | process 1024834 can no longer be monitored (due to stat problems) - aborting
[2026-03-19 17:56:34] 2026-03-19 16:56:05,038 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 17:56:34] 2026-03-19 16:56:05,070 | INFO     | number of running child processes to parent process 1024834: 1
[2026-03-19 17:56:34] 2026-03-19 16:56:05,070 | INFO     | maximum number of monitored processes: 6
[2026-03-19 17:56:34] 2026-03-19 16:56:05,071 | INFO     | aborting job monitoring since job object (job id=7043151915) has expired
[2026-03-19 17:56:34] 2026-03-19 16:56:05,071 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 17:56:34] 2026-03-19 16:56:05,071 | INFO     | will abort loop
[2026-03-19 17:56:34] 2026-03-19 16:56:05,142 | INFO     | [job] control thread has finished
[2026-03-19 17:56:34] 2026-03-19 16:56:05,336 | INFO     | [data] copytool_out thread has finished
[2026-03-19 17:56:34] 2026-03-19 16:56:05,491 | INFO     | [payload] control thread has finished
[2026-03-19 17:56:34] 2026-03-19 16:56:05,494 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 17:56:34] 2026-03-19 16:56:05,672 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 17:56:34] 2026-03-19 16:56:05,678 | INFO     | [job] validate thread has finished
[2026-03-19 17:56:34] 2026-03-19 16:56:05,922 | INFO     | job.realtimelogging is not enabled
[2026-03-19 17:56:34] 2026-03-19 16:56:06,076 | INFO     | [job] job monitor thread has finished
[2026-03-19 17:56:34] 2026-03-19 16:56:06,120 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 17:56:34] 2026-03-19 16:56:06,928 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 17:56:34] 2026-03-19 16:56:07,126 | INFO     | [job] queue monitor thread has finished
[2026-03-19 17:56:34] 2026-03-19 16:56:07,205 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 17:56:34] 2026-03-19 16:56:10,810 | INFO     | [monitor] cgroup control has ended
[2026-03-19 17:56:34] 2026-03-19 16:56:12,406 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140138715985728)>', '<ExcThread(monitor, started 140137837082368)>']
[2026-03-19 17:56:34] 2026-03-19 16:56:17,432 | INFO     | all workflow threads have been joined
[2026-03-19 17:56:34] 2026-03-19 16:56:17,433 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 17:56:34] 2026-03-19 16:56:17,433 | INFO     | traces error code: 0
[2026-03-19 17:56:34] 2026-03-19 16:56:17,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 17:56:34] 2026-03-19 16:56:33,907 | INFO     | PID=1020404 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 17:56:34] 2026-03-19 16:56:33,908 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 17:56:34] 2026-03-19 16:56:33,908 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 17:56:34] 2026-03-19 16:56:33,908 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 17:56:34] 2026-03-19 16:56:33,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 17:56:34] 2026-03-19 16:56:33,908 | CRITICAL | thread 'MainThread' is not alive
[2026-03-19 17:56:34] 2026-03-19 16:56:33,908 | INFO     | [monitor] control thread has ended
[2026-03-19 17:56:34] 2026-03-19 16:56:33,952 [wrapper] ==== pilot stdout END ====
[2026-03-19 17:56:34] 2026-03-19 16:56:33,955 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 17:56:34] 2026-03-19 16:56:33,958 [wrapper] pilotpid: 1020404
[2026-03-19 17:56:34] 2026-03-19 16:56:33,961 [wrapper] Pilot exit status: 0
[2026-03-19 17:56:34] 2026-03-19 16:56:33,969 [wrapper] pandaids: 7043151915
[2026-03-19 17:56:34] 2026-03-19 16:56:33,984 [wrapper] cleanup supervisor_pilot 1030044 1020405
[2026-03-19 17:56:34] 2026-03-19 16:56:33,987 [wrapper] Test setup, not cleaning
[2026-03-19 17:56:34] 2026-03-19 16:56:33,989 [wrapper] apfmon messages muted
[2026-03-19 17:56:34] 2026-03-19 16:56:33,992 [wrapper] ==== wrapper stdout END ====
[2026-03-19 17:56:34] 2026-03-19 16:56:33,994 [wrapper] ==== wrapper stderr END ====
[2026-03-19 17:56:34]  *** Error codes and diagnostics ***
[2026-03-19 17:56:34]     "exeErrorCode": 0,
[2026-03-19 17:56:34]     "exeErrorDiag": "",
[2026-03-19 17:56:34]     "pilotErrorCode": 0,
[2026-03-19 17:56:34]     "pilotErrorDiag": "",
[2026-03-19 17:56:34]  *** Listing of results directory ***
[2026-03-19 17:56:34] total 616544
[2026-03-19 17:56:34] -rw-r--r-- 1 boinc boinc    585013 Mar 12 06:40 pilot3.tar.gz
[2026-03-19 17:56:34] -rwx------ 1 boinc boinc     36322 Mar 12 06:41 runpilot2-wrapper.sh
[2026-03-19 17:56:34] -rw-r--r-- 1 boinc boinc      5111 Mar 12 06:42 queuedata.json
[2026-03-19 17:56:34] -rw-r--r-- 1 boinc boinc       100 Mar 19 16:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 17:56:34] -rwxr-xr-x 1 boinc boinc      7986 Mar 19 16:29 run_atlas
[2026-03-19 17:56:34] -rw-r--r-- 1 boinc boinc       105 Mar 19 16:29 job.xml
[2026-03-19 17:56:34] -rw-r--r-- 2 boinc boinc 443749656 Mar 19 16:29 EVNT.46701403._000882.pool.root.1
[2026-03-19 17:56:34] drwxrwx--x 2 boinc boinc      4096 Mar 19 16:29 shared
[2026-03-19 17:56:34] -rw-r--r-- 2 boinc boinc    597531 Mar 19 16:29 input.tar.gz
[2026-03-19 17:56:34] -rw-r--r-- 2 boinc boinc     15845 Mar 19 16:29 start_atlas.sh
[2026-03-19 17:56:34] -rw-r--r-- 1 boinc boinc         0 Mar 19 16:29 boinc_setup_complete
[2026-03-19 17:56:34] -rw-r--r-- 1 boinc boinc      6199 Mar 19 16:29 init_data.xml
[2026-03-19 17:56:34] -rw-r--r-- 1 boinc boinc         0 Mar 19 16:29 boinc_lockfile
[2026-03-19 17:56:34] -rw-r--r-- 1 boinc boinc      2565 Mar 19 16:29 pandaJob.out
[2026-03-19 17:56:34] -rw------- 1 boinc boinc   1010732 Mar 19 16:29 agis_schedconf.cvmfs.json
[2026-03-19 17:56:34] -rw------- 1 boinc boinc   1511579 Mar 19 16:29 agis_ddmendpoints.agis.ALL.json
[2026-03-19 17:56:34] -rw------- 1 boinc boinc       423 Mar 19 16:30 workernode_map.json
[2026-03-19 17:56:34] drwx------ 5 boinc boinc      4096 Mar 19 16:30 pilot3
[2026-03-19 17:56:34] -rw------- 1 boinc boinc 181584218 Mar 19 17:55 HITS.48955006._044527.pool.root.1
[2026-03-19 17:56:34] -rw-r--r-- 1 boinc boinc       530 Mar 19 17:55 boinc_task_state.xml
[2026-03-19 17:56:34] -rw------- 1 boinc boinc      1018 Mar 19 17:55 memory_monitor_summary.json
[2026-03-19 17:56:34] -rw------- 1 boinc boinc    282794 Mar 19 17:56 log.48955006._044527.job.log.tgz.1
[2026-03-19 17:56:34] -rw------- 1 boinc boinc      6316 Mar 19 17:56 heartbeat.json
[2026-03-19 17:56:34] -rw-r--r-- 1 boinc boinc        27 Mar 19 17:56 wrapper_checkpoint.txt
[2026-03-19 17:56:34] -rw-r--r-- 1 boinc boinc      8192 Mar 19 17:56 boinc_mmap_file
[2026-03-19 17:56:34] -rw------- 1 boinc boinc        95 Mar 19 17:56 pilot_heartbeat.json
[2026-03-19 17:56:34] -rw------- 1 boinc boinc       817 Mar 19 17:56 pilotlog.txt
[2026-03-19 17:56:34] -rw------- 1 boinc boinc    754039 Mar 19 17:56 log.48955006._044527.job.log.1
[2026-03-19 17:56:34] -rw------- 1 boinc boinc       357 Mar 19 17:56 output.list
[2026-03-19 17:56:34] -rw-r--r-- 1 boinc boinc       620 Mar 19 17:56 runtime_log
[2026-03-19 17:56:34] -rw------- 1 boinc boinc   1054720 Mar 19 17:56 result.tar.gz
[2026-03-19 17:56:34] -rw-r--r-- 1 boinc boinc      8916 Mar 19 17:56 runtime_log.err
[2026-03-19 17:56:34] -rw------- 1 boinc boinc       661 Mar 19 17:56 VJ8MDmsynK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYDmLDmmXsaGo.diag
[2026-03-19 17:56:34] -rw-r--r-- 1 boinc boinc     10147 Mar 19 17:56 stderr.txt
[2026-03-19 17:56:34] HITS file was successfully produced:
[2026-03-19 17:56:34] -rw------- 1 boinc boinc 181584218 Mar 19 17:55 shared/HITS.pool.root.1
[2026-03-19 17:56:34]  *** Contents of shared directory: ***
[2026-03-19 17:56:34] total 612324
[2026-03-19 17:56:34] -rw-r--r-- 2 boinc boinc 443749656 Mar 19 16:29 ATLAS.root_0
[2026-03-19 17:56:34] -rw-r--r-- 2 boinc boinc    597531 Mar 19 16:29 input.tar.gz
[2026-03-19 17:56:34] -rw-r--r-- 2 boinc boinc     15845 Mar 19 16:29 start_atlas.sh
[2026-03-19 17:56:34] -rw------- 1 boinc boinc 181584218 Mar 19 17:55 HITS.pool.root.1
[2026-03-19 17:56:34] -rw------- 1 boinc boinc   1054720 Mar 19 17:56 result.tar.gz
17:56:36 (1016346): run_atlas exited; CPU time 14477.727587
17:56:36 (1016346): called boinc_finish(0)

</stderr_txt>
]]>

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