Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:18:38 (290783): wrapper (7.7.26015): starting
10:18:38 (290783): wrapper: running run_atlas (--nthreads 3)
[2026-03-20 10:18:38] Arguments: --nthreads 3
[2026-03-20 10:18:38] Threads: 3
[2026-03-20 10:18:38] Checking for CVMFS
[2026-03-20 10:18:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-20 10:18:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-20 10:18:39] Running cvmfs_config stat atlas.cern.ch
[2026-03-20 10:18:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-20 10:18:39] 2.9.2.0 41941 32931 96084 157492 0 50 26590531 36864000 0 130560 0 12851318 99.983 1209164 12313 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-20 10:18:39] CVMFS is ok
[2026-03-20 10:18:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 10:18:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-20 10:18:39] Further information can be found at the LHC@home message board.
[2026-03-20 10:18:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 10:18:39] Checking for apptainer binary...
[2026-03-20 10:18:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-20 10:18:39] Running /usr/bin/apptainer --version
[2026-03-20 10:18:39] apptainer version 1.4.1-1.1
[2026-03-20 10:18:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 10:18:39] thA373
[2026-03-20 10:18:39] apptainer works
[2026-03-20 10:18:39] Set ATHENA_PROC_NUMBER=3
[2026-03-20 10:18:39] Set ATHENA_CORE_NUMBER=3
[2026-03-20 10:18:39] Starting ATLAS job with PandaID=7058687791
[2026-03-20 10:18:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 14:15:32]  *** The last 200 lines of the pilot log: ***
[2026-03-20 14:15:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 14:15:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 14:15:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 14:15:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 14:15:32] 
[2026-03-20 14:15:32] 2026-03-20 13:15:01,835 | INFO     | **************************************
[2026-03-20 14:15:32] 2026-03-20 13:15:02,338 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-20 14:15:32] 2026-03-20 13:15:02,352 | INFO     | sufficient remaining disk space (230518947840 B)
[2026-03-20 14:15:32] 2026-03-20 13:15:02,352 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 14:15:32] 2026-03-20 13:15:02,352 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 14:15:32] 2026-03-20 13:15:02,352 | INFO     | update_server=False
[2026-03-20 14:15:32] 2026-03-20 13:15:02,352 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 14:15:32] 2026-03-20 13:15:02,352 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 14:15:32] 2026-03-20 13:15:02,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 14:15:32] 2026-03-20 13:15:02,354 | INFO     | all job control threads have been joined
[2026-03-20 14:15:32] 2026-03-20 13:15:02,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 14:15:32] 2026-03-20 13:15:02,406 | WARNING  | process 299246 can no longer be monitored (due to stat problems) - aborting
[2026-03-20 14:15:32] 2026-03-20 13:15:02,434 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 14:15:32] 2026-03-20 13:15:02,434 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 14:15:32] 2026-03-20 13:15:02,435 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-20 14:15:32] 2026-03-20 13:15:02,435 | WARNING  | maxPSS not found in memory monitor output
[2026-03-20 14:15:32] 2026-03-20 13:15:02,435 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7058687791/payload.stdout) since it has not been created yet
[2026-03-20 14:15:32] 2026-03-20 13:15:02,435 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-20 14:15:32] 2026-03-20 13:15:02,445 | INFO     | sufficient remaining disk space (230518947840 B)
[2026-03-20 14:15:32] 2026-03-20 13:15:02,445 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-20 14:15:32] 2026-03-20 13:15:02,445 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7058687791/HITS.49178217._000337.pool.root.1 since it does not exist
[2026-03-20 14:15:32] 2026-03-20 13:15:02,482 | INFO     | number of running child processes to parent process 299246: 1
[2026-03-20 14:15:32] 2026-03-20 13:15:02,482 | INFO     | maximum number of monitored processes: 6
[2026-03-20 14:15:32] 2026-03-20 13:15:02,483 | INFO     | aborting job monitoring since job object (job id=7058687791) has expired
[2026-03-20 14:15:32] 2026-03-20 13:15:02,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 14:15:32] 2026-03-20 13:15:02,483 | INFO     | will abort loop
[2026-03-20 14:15:32] 2026-03-20 13:15:02,556 | INFO     | all payload control threads have been joined
[2026-03-20 14:15:32] 2026-03-20 13:15:02,644 | INFO     | all data control threads have been joined
[2026-03-20 14:15:32] 2026-03-20 13:15:03,358 | INFO     | [job] retrieve thread has finished
[2026-03-20 14:15:32] 2026-03-20 13:15:03,358 | INFO     | [job] queue monitor thread has finished
[2026-03-20 14:15:32] 2026-03-20 13:15:03,359 | INFO     | [job] control thread has finished
[2026-03-20 14:15:32] 2026-03-20 13:15:03,488 | INFO     | [job] job monitor thread has finished
[2026-03-20 14:15:32] 2026-03-20 13:15:03,561 | INFO     | [payload] control thread has finished
[2026-03-20 14:15:32] 2026-03-20 13:15:03,620 | INFO     | [payload] validate_post thread has finished
[2026-03-20 14:15:32] 2026-03-20 13:15:03,650 | INFO     | [data] control thread has finished
[2026-03-20 14:15:32] 2026-03-20 13:15:03,738 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 14:15:32] 2026-03-20 13:15:04,219 | INFO     | [payload] failed_post thread has finished
[2026-03-20 14:15:32] 2026-03-20 13:15:04,226 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 14:15:32] 2026-03-20 13:15:04,232 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 14:15:32] 2026-03-20 13:15:04,270 | INFO     | [job] validate thread has finished
[2026-03-20 14:15:32] 2026-03-20 13:15:04,376 | INFO     | [data] copytool_out thread has finished
[2026-03-20 14:15:32] 2026-03-20 13:15:04,528 | INFO     | [data] copytool_in thread has finished
[2026-03-20 14:15:32] 2026-03-20 13:15:04,701 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 14:15:32] 2026-03-20 13:15:06,359 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 14:15:32] 2026-03-20 13:15:08,450 | INFO     | [monitor] cgroup control has ended
[2026-03-20 14:15:32] 2026-03-20 13:15:10,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140089006139200)>', '<ExcThread(monitor, started 140088075876096)>']
[2026-03-20 14:15:32] 2026-03-20 13:15:15,341 | INFO     | all workflow threads have been joined
[2026-03-20 14:15:32] 2026-03-20 13:15:15,341 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 14:15:32] 2026-03-20 13:15:15,341 | INFO     | traces error code: 0
[2026-03-20 14:15:32] 2026-03-20 13:15:15,341 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 14:15:32] 2026-03-20 13:15:31,938 | INFO     | PID=294822 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-20 14:15:32] 2026-03-20 13:15:31,939 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 14:15:32] 2026-03-20 13:15:31,939 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 14:15:32] 2026-03-20 13:15:31,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 14:15:32] 2026-03-20 13:15:31,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 14:15:32] 2026-03-20 13:15:31,939 | CRITICAL | thread 'MainThread' is not alive
[2026-03-20 14:15:32] 2026-03-20 13:15:31,939 | INFO     | [monitor] control thread has ended
[2026-03-20 14:15:32] 2026-03-20 13:15:31,992 [wrapper] ==== pilot stdout END ====
[2026-03-20 14:15:32] 2026-03-20 13:15:31,994 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 14:15:32] 2026-03-20 13:15:31,997 [wrapper] pilotpid: 294822
[2026-03-20 14:15:32] 2026-03-20 13:15:31,999 [wrapper] Pilot exit status: 0
[2026-03-20 14:15:32] 2026-03-20 13:15:32,006 [wrapper] pandaids: 7058687791
[2026-03-20 14:15:32] 2026-03-20 13:15:32,022 [wrapper] cleanup supervisor_pilot  306397 294823
[2026-03-20 14:15:32] 2026-03-20 13:15:32,025 [wrapper] Test setup, not cleaning
[2026-03-20 14:15:32] 2026-03-20 13:15:32,027 [wrapper] apfmon messages muted
[2026-03-20 14:15:32] 2026-03-20 13:15:32,029 [wrapper] ==== wrapper stdout END ====
[2026-03-20 14:15:32] 2026-03-20 13:15:32,031 [wrapper] ==== wrapper stderr END ====
[2026-03-20 14:15:32]  *** Error codes and diagnostics ***
[2026-03-20 14:15:32]     "exeErrorCode": 0,
[2026-03-20 14:15:32]     "exeErrorDiag": "",
[2026-03-20 14:15:32]     "pilotErrorCode": 0,
[2026-03-20 14:15:32]     "pilotErrorDiag": "",
[2026-03-20 14:15:32]  *** Listing of results directory ***
[2026-03-20 14:15:32] total 496412
[2026-03-20 14:15:32] -rw-r--r-- 1 boinc boinc    585013 Mar 18 09:55 pilot3.tar.gz
[2026-03-20 14:15:32] -rwx------ 1 boinc boinc     36322 Mar 18 09:58 runpilot2-wrapper.sh
[2026-03-20 14:15:32] -rw-r--r-- 1 boinc boinc      5111 Mar 18 10:01 queuedata.json
[2026-03-20 14:15:32] -rw-r--r-- 1 boinc boinc       100 Mar 20 10:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 14:15:32] -rwxr-xr-x 1 boinc boinc      7986 Mar 20 10:18 run_atlas
[2026-03-20 14:15:32] -rw-r--r-- 1 boinc boinc       105 Mar 20 10:18 job.xml
[2026-03-20 14:15:32] -rw-r--r-- 2 boinc boinc 244392590 Mar 20 10:18 EVNT.49128307._000016.pool.root.1
[2026-03-20 14:15:32] -rw-r--r-- 2 boinc boinc    597541 Mar 20 10:18 input.tar.gz
[2026-03-20 14:15:32] -rw-r--r-- 2 boinc boinc     15845 Mar 20 10:18 start_atlas.sh
[2026-03-20 14:15:32] drwxrwx--x 2 boinc boinc      4096 Mar 20 10:18 shared
[2026-03-20 14:15:32] -rw-r--r-- 1 boinc boinc         0 Mar 20 10:18 boinc_setup_complete
[2026-03-20 14:15:32] -rw-r--r-- 1 boinc boinc      6438 Mar 20 10:18 init_data.xml
[2026-03-20 14:15:32] -rw-r--r-- 1 boinc boinc         0 Mar 20 10:18 boinc_lockfile
[2026-03-20 14:15:32] -rw-r--r-- 1 boinc boinc      2598 Mar 20 10:18 pandaJob.out
[2026-03-20 14:15:32] -rw------- 1 boinc boinc   1010740 Mar 20 10:18 agis_schedconf.cvmfs.json
[2026-03-20 14:15:32] -rw------- 1 boinc boinc       426 Mar 20 10:18 workernode_map.json
[2026-03-20 14:15:32] drwx------ 5 boinc boinc      4096 Mar 20 10:18 pilot3
[2026-03-20 14:15:32] -rw------- 1 boinc boinc 255252925 Mar 20 14:14 HITS.49178217._000337.pool.root.1
[2026-03-20 14:15:32] -rw-r--r-- 1 boinc boinc       530 Mar 20 14:14 boinc_task_state.xml
[2026-03-20 14:15:32] -rw------- 1 boinc boinc      1020 Mar 20 14:14 memory_monitor_summary.json
[2026-03-20 14:15:32] -rw------- 1 boinc boinc   1511579 Mar 20 14:14 agis_ddmendpoints.agis.ALL.json
[2026-03-20 14:15:32] -rw------- 1 boinc boinc    381531 Mar 20 14:14 log.49178217._000337.job.log.tgz.1
[2026-03-20 14:15:32] -rw------- 1 boinc boinc        95 Mar 20 14:14 pilot_heartbeat.json
[2026-03-20 14:15:32] -rw------- 1 boinc boinc      6306 Mar 20 14:15 heartbeat.json
[2026-03-20 14:15:32] -rw-r--r-- 1 boinc boinc      8192 Mar 20 14:15 boinc_mmap_file
[2026-03-20 14:15:32] -rw-r--r-- 1 boinc boinc        28 Mar 20 14:15 wrapper_checkpoint.txt
[2026-03-20 14:15:32] -rw------- 1 boinc boinc       816 Mar 20 14:15 pilotlog.txt
[2026-03-20 14:15:32] -rw------- 1 boinc boinc   1992407 Mar 20 14:15 log.49178217._000337.job.log.1
[2026-03-20 14:15:32] -rw------- 1 boinc boinc       357 Mar 20 14:15 output.list
[2026-03-20 14:15:32] -rw-r--r-- 1 boinc boinc       620 Mar 20 14:15 runtime_log
[2026-03-20 14:15:32] -rw------- 1 boinc boinc   2396160 Mar 20 14:15 result.tar.gz
[2026-03-20 14:15:32] -rw------- 1 boinc boinc       660 Mar 20 14:15 wTbLDmau1M9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmfw1LDmK0T5Jm.diag
[2026-03-20 14:15:32] -rw-r--r-- 1 boinc boinc      8897 Mar 20 14:15 runtime_log.err
[2026-03-20 14:15:32] -rw-r--r-- 1 boinc boinc     10085 Mar 20 14:15 stderr.txt
[2026-03-20 14:15:32] HITS file was successfully produced:
[2026-03-20 14:15:32] -rw------- 1 boinc boinc 255252925 Mar 20 14:14 shared/HITS.pool.root.1
[2026-03-20 14:15:32]  *** Contents of shared directory: ***
[2026-03-20 14:15:32] total 490888
[2026-03-20 14:15:32] -rw-r--r-- 2 boinc boinc 244392590 Mar 20 10:18 ATLAS.root_0
[2026-03-20 14:15:32] -rw-r--r-- 2 boinc boinc    597541 Mar 20 10:18 input.tar.gz
[2026-03-20 14:15:32] -rw-r--r-- 2 boinc boinc     15845 Mar 20 10:18 start_atlas.sh
[2026-03-20 14:15:32] -rw------- 1 boinc boinc 255252925 Mar 20 14:14 HITS.pool.root.1
[2026-03-20 14:15:32] -rw------- 1 boinc boinc   2396160 Mar 20 14:15 result.tar.gz
14:15:33 (290783): run_atlas exited; CPU time 41443.126097
14:15:33 (290783): called boinc_finish(0)

</stderr_txt>
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