Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:22:05 (481703): wrapper (7.7.26015): starting
17:22:05 (481703): wrapper: running run_atlas (--nthreads 12)
[2026-03-22 17:22:05] Arguments: --nthreads 12
[2026-03-22 17:22:05] Threads: 12
[2026-03-22 17:22:05] Checking for CVMFS
[2026-03-22 17:22:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-22 17:22:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-22 17:22:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-22 17:22:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-22 17:22:08] 2.13.3.0 10149 1710 50556 157585 3 50 2336294 4096000 2736 130560 0 1913006 99.983 219126 1125 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-03-22 17:22:08] CVMFS is ok
[2026-03-22 17:22:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-22 17:22:08] Checking for apptainer binary...
[2026-03-22 17:22:08] apptainer is not installed, using version from CVMFS
[2026-03-22 17:22:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-22 17:22:08] dualxeon1
[2026-03-22 17:22:08] apptainer works
[2026-03-22 17:22:08] Set ATHENA_PROC_NUMBER=12
[2026-03-22 17:22:08] Set ATHENA_CORE_NUMBER=12
[2026-03-22 17:22:08] Starting ATLAS job with PandaID=7058647582
[2026-03-22 17:22:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31418/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-22 21:11:16]  *** The last 200 lines of the pilot log: ***
[2026-03-22 21:11:16] 2026-03-22 21:10:38,168 | INFO     | preparing for final server update for job 7058647582 in state='finished'
[2026-03-22 21:11:16] 2026-03-22 21:10:38,169 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31418/slots/0/PanDA_Pilot-7058647582/jobReport.json
[2026-03-22 21:11:16] 2026-03-22 21:10:38,174 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31418/slots/0/workernode_map.json
[2026-03-22 21:11:16] 2026-03-22 21:10:38,175 | INFO     | this job has now completed (state=finished)
[2026-03-22 21:11:16] 2026-03-22 21:10:38,175 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-22 21:11:16] 2026-03-22 21:10:38,175 | INFO     | log transfer has been attempted: DONE
[2026-03-22 21:11:16] 2026-03-22 21:10:38,175 | INFO     | job 7058647582 has finished - writing final server update
[2026-03-22 21:11:16] 2026-03-22 21:10:38,176 | INFO     | total number of processed events: 400 (read)
[2026-03-22 21:11:16] 2026-03-22 21:10:38,189 | INFO     | using path: /opt/boinc/instance_homes/boinc_31418/slots/0/PanDA_Pilot-7058647582/memory_monitor_summary.json (trf name=prmon)
[2026-03-22 21:11:16] 2026-03-22 21:10:38,189 | INFO     | extracted standard info from prmon json
[2026-03-22 21:11:16] 2026-03-22 21:10:38,190 | INFO     | extracted standard memory fields from prmon json
[2026-03-22 21:11:16] 2026-03-22 21:10:38,193 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-22 21:11:16] 2026-03-22 21:10:38,193 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-22 21:11:16] 2026-03-22 21:10:38,193 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-22 21:11:16] 2026-03-22 21:10:38,204 | INFO     | fitting pss+swap vs Time
[2026-03-22 21:11:16] 2026-03-22 21:10:38,204 | INFO     | sum of square deviations: 3485088600.0
[2026-03-22 21:11:16] 2026-03-22 21:10:38,206 | INFO     | sum of deviations: -30693587922.5
[2026-03-22 21:11:16] 2026-03-22 21:10:38,206 | INFO     | mean x: 1774206997.5
[2026-03-22 21:11:16] 2026-03-22 21:10:38,206 | INFO     | mean y: 2734431.183035714
[2026-03-22 21:11:16] 2026-03-22 21:10:38,206 | INFO     | intersect: 15628385518.068169
[2026-03-22 21:11:16] 2026-03-22 21:10:38,210 | INFO     | chi2: 3.0196940161032844
[2026-03-22 21:11:16] 2026-03-22 21:10:38,210 | INFO     | sum of square deviations: 3256879670.0
[2026-03-22 21:11:16] 2026-03-22 21:10:38,212 | INFO     | sum of deviations: -14454178079.0
[2026-03-22 21:11:16] 2026-03-22 21:10:38,212 | INFO     | mean x: 1774206845.0
[2026-03-22 21:11:16] 2026-03-22 21:10:38,212 | INFO     | mean y: 2745096.2831050227
[2026-03-22 21:11:16] 2026-03-22 21:10:38,212 | INFO     | intersect: 7876754665.267503
[2026-03-22 21:11:16] 2026-03-22 21:10:38,216 | INFO     | chi2: 2.3236191716173566
[2026-03-22 21:11:16] 2026-03-22 21:10:38,216 | INFO     | current chi2=2.3236191716173566 (change=23.05117143571276 %)
[2026-03-22 21:11:16] 2026-03-22 21:10:38,216 | INFO     | right removable region: 218
[2026-03-22 21:11:16] 2026-03-22 21:10:38,217 | INFO     | sum of square deviations: 3256879670.0
[2026-03-22 21:11:16] 2026-03-22 21:10:38,218 | INFO     | sum of deviations: -77747481375.0
[2026-03-22 21:11:16] 2026-03-22 21:10:38,218 | INFO     | mean x: 1774207150.0
[2026-03-22 21:11:16] 2026-03-22 21:10:38,218 | INFO     | mean y: 2765650.872146119
[2026-03-22 21:11:16] 2026-03-22 21:10:38,219 | INFO     | intersect: 42356230109.6978
[2026-03-22 21:11:16] 2026-03-22 21:10:38,222 | INFO     | chi2: 1.1696622318582568
[2026-03-22 21:11:16] 2026-03-22 21:10:38,222 | INFO     | current chi2=1.1696622318582568 (change=61.26553797766475 %)
[2026-03-22 21:11:16] 2026-03-22 21:10:38,223 | INFO     | sum of square deviations: 3038856977.5
[2026-03-22 21:11:16] 2026-03-22 21:10:38,224 | INFO     | sum of deviations: -86161842023.5
[2026-03-22 21:11:16] 2026-03-22 21:10:38,224 | INFO     | mean x: 1774207302.5
[2026-03-22 21:11:16] 2026-03-22 21:10:38,225 | INFO     | mean y: 2771524.0140186916
[2026-03-22 21:11:16] 2026-03-22 21:10:38,225 | INFO     | intersect: 50307530993.381004
[2026-03-22 21:11:16] 2026-03-22 21:10:38,228 | INFO     | chi2: 1.0693615777245125
[2026-03-22 21:11:16] 2026-03-22 21:10:38,228 | INFO     | current chi2=1.0693615777245125 (change=8.575181056705187 %)
[2026-03-22 21:11:16] 2026-03-22 21:10:38,228 | INFO     | left removable region: 20
[2026-03-22 21:11:16] 2026-03-22 21:10:38,229 | INFO     | sum of square deviations: 2406926989.5
[2026-03-22 21:11:16] 2026-03-22 21:10:38,230 | INFO     | sum of deviations: -53739590046.0
[2026-03-22 21:11:16] 2026-03-22 21:10:38,230 | INFO     | mean x: 1774207424.5
[2026-03-22 21:11:16] 2026-03-22 21:10:38,230 | INFO     | mean y: 2771586.3131313133
[2026-03-22 21:11:16] 2026-03-22 21:10:38,231 | INFO     | intersect: 39615597428.19956
[2026-03-22 21:11:16] 2026-03-22 21:10:38,234 | INFO     | chi2: 0.3285266780287661
[2026-03-22 21:11:16] 2026-03-22 21:10:38,234 | INFO     | current memory leak: -22.33 B/s (using 198 data points, chi2=0.33)
[2026-03-22 21:11:16] 2026-03-22 21:10:38,235 | INFO     | could have reported an average CPU frequency of 2594 MHz (11 samples)
[2026-03-22 21:11:16] 2026-03-22 21:10:38,235 | INFO     | ..............................
[2026-03-22 21:11:16] 2026-03-22 21:10:38,235 | INFO     | . Timing measurements:
[2026-03-22 21:11:16] 2026-03-22 21:10:38,235 | INFO     | . get job = 0 s
[2026-03-22 21:11:16] 2026-03-22 21:10:38,235 | INFO     | . initial setup = 14 s
[2026-03-22 21:11:16] 2026-03-22 21:10:38,236 | INFO     | . payload setup = 18 s
[2026-03-22 21:11:16] 2026-03-22 21:10:38,236 | INFO     | . stage-in = 0 s
[2026-03-22 21:11:16] 2026-03-22 21:10:38,236 | INFO     | . payload execution = 13643 s
[2026-03-22 21:11:16] 2026-03-22 21:10:38,236 | INFO     | . stage-out = 1 s
[2026-03-22 21:11:16] 2026-03-22 21:10:38,236 | INFO     | . log creation = 0 s
[2026-03-22 21:11:16] 2026-03-22 21:10:38,236 | INFO     | ..............................
[2026-03-22 21:11:16] 2026-03-22 21:10:38,665 | INFO     | 
[2026-03-22 21:11:16] 2026-03-22 21:10:38,665 | INFO     | job summary report
[2026-03-22 21:11:16] 2026-03-22 21:10:38,665 | INFO     | --------------------------------------------------
[2026-03-22 21:11:16] 2026-03-22 21:10:38,665 | INFO     | PanDA job id: 7058647582
[2026-03-22 21:11:16] 2026-03-22 21:10:38,665 | INFO     | task id: 49190121
[2026-03-22 21:11:16] 2026-03-22 21:10:38,666 | INFO     | errors: (none)
[2026-03-22 21:11:16] 2026-03-22 21:10:38,666 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-22 21:11:16] 2026-03-22 21:10:38,666 | INFO     | pilot state: finished 
[2026-03-22 21:11:16] 2026-03-22 21:10:38,666 | INFO     | transexitcode: 0
[2026-03-22 21:11:16] 2026-03-22 21:10:38,666 | INFO     | exeerrorcode: 0
[2026-03-22 21:11:16] 2026-03-22 21:10:38,666 | INFO     | exeerrordiag: 
[2026-03-22 21:11:16] 2026-03-22 21:10:38,666 | INFO     | exitcode: 0
[2026-03-22 21:11:16] 2026-03-22 21:10:38,666 | INFO     | exitmsg: OK
[2026-03-22 21:11:16] 2026-03-22 21:10:38,667 | INFO     | cpuconsumptiontime: 102713 s
[2026-03-22 21:11:16] 2026-03-22 21:10:38,667 | INFO     | nevents: 400
[2026-03-22 21:11:16] 2026-03-22 21:10:38,667 | INFO     | neventsw: 0
[2026-03-22 21:11:16] 2026-03-22 21:10:38,667 | INFO     | pid: 490447
[2026-03-22 21:11:16] 2026-03-22 21:10:38,667 | INFO     | pgrp: 490447
[2026-03-22 21:11:16] 2026-03-22 21:10:38,667 | INFO     | corecount: 12
[2026-03-22 21:11:16] 2026-03-22 21:10:38,667 | INFO     | event service: False
[2026-03-22 21:11:16] 2026-03-22 21:10:38,667 | INFO     | sizes: {0: 2279815, 1: 2280219, 2: 2280219, 13665: 2310465, 13668: 2319565, 13669: 2319703}
[2026-03-22 21:11:16] 2026-03-22 21:10:38,667 | INFO     | --------------------------------------------------
[2026-03-22 21:11:16] 2026-03-22 21:10:38,668 | INFO     | 
[2026-03-22 21:11:16] 2026-03-22 21:10:38,668 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31418/slots/0
[2026-03-22 21:11:16] 2026-03-22 21:10:38,705 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,706 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,706 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,706 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,706 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,706 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,706 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,706 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,707 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,707 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,707 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,707 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,707 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,707 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,707 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,707 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,708 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-22 21:11:16] 2026-03-22 21:10:38,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,711 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-22 21:11:16] 2026-03-22 21:10:38,711 | INFO     | job 7058647582 has completed (purged errors)
[2026-03-22 21:11:16] 2026-03-22 21:10:38,711 | INFO     | overall cleanup function is called
[2026-03-22 21:11:16] 2026-03-22 21:10:39,725 | INFO     | --- collectZombieJob: --- 10, [490447]
[2026-03-22 21:11:16] 2026-03-22 21:10:39,725 | INFO     | zombie collector waiting for pid 490447
[2026-03-22 21:11:16] 2026-03-22 21:10:39,725 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-22 21:11:16] 2026-03-22 21:10:39,725 | INFO     | collected zombie processes
[2026-03-22 21:11:16] 2026-03-22 21:10:39,726 | INFO     | will attempt to kill all subprocesses of pid=490447
[2026-03-22 21:11:16] 2026-03-22 21:10:40,071 | INFO     | process IDs to be killed: [490447] (in reverse order)
[2026-03-22 21:11:16] 2026-03-22 21:10:40,179 | WARNING  | found no corresponding commands to process id(s)
[2026-03-22 21:11:16] 2026-03-22 21:10:40,179 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-22 21:11:16] 2026-03-22 21:10:40,185 | INFO     | did not find any defunct processes belonging to 490447
[2026-03-22 21:11:16] 2026-03-22 21:10:40,196 | INFO     | did not find any defunct processes belonging to 490447
[2026-03-22 21:11:16] 2026-03-22 21:10:40,196 | INFO     | ready for new job
[2026-03-22 21:11:16] 2026-03-22 21:10:40,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-22 21:11:16] 2026-03-22 21:10:40,201 | INFO     | **************************************
[2026-03-22 21:11:16] 2026-03-22 21:10:40,201 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-22 21:11:16] 2026-03-22 21:10:40,201 | INFO     | **************************************
[2026-03-22 21:11:16] 2026-03-22 21:10:40,202 | INFO     | 
[2026-03-22 21:11:16] 2026-03-22 21:10:40,203 | INFO     | architecture information:
[2026-03-22 21:11:16] 2026-03-22 21:10:40,207 | INFO     | executing command: cat /etc/os-release
[2026-03-22 21:11:16] 2026-03-22 21:10:40,230 | INFO     | cat /etc/os-release:
[2026-03-22 21:11:16] NAME="CentOS Linux"
[2026-03-22 21:11:16] VERSION="7 (Core)"
[2026-03-22 21:11:16] ID="centos"
[2026-03-22 21:11:16] ID_LIKE="rhel fedora"
[2026-03-22 21:11:16] VERSION_ID="7"
[2026-03-22 21:11:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-22 21:11:16] ANSI_COLOR="0;31"
[2026-03-22 21:11:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-22 21:11:16] HOME_URL="https://www.centos.org/"
[2026-03-22 21:11:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-22 21:11:16] 
[2026-03-22 21:11:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-22 21:11:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-22 21:11:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-22 21:11:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-22 21:11:16] 
[2026-03-22 21:11:16] 2026-03-22 21:10:40,231 | INFO     | **************************************
[2026-03-22 21:11:16] 2026-03-22 21:10:40,736 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/0
[2026-03-22 21:11:16] 2026-03-22 21:10:40,763 | INFO     | sufficient remaining disk space (411735949312 B)
[2026-03-22 21:11:16] 2026-03-22 21:10:40,763 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-22 21:11:16] 2026-03-22 21:10:40,763 | INFO     | current server update state: UPDATING_FINAL
[2026-03-22 21:11:16] 2026-03-22 21:10:40,763 | INFO     | update_server=False
[2026-03-22 21:11:16] 2026-03-22 21:10:40,763 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-22 21:11:16] 2026-03-22 21:10:41,250 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-22 21:11:16] 2026-03-22 21:10:41,250 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-22 21:11:16] 2026-03-22 21:10:41,250 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-22 21:11:16] 2026-03-22 21:10:41,250 | INFO     | will abort loop
[2026-03-22 21:11:16] 2026-03-22 21:10:41,370 | INFO     | all payload control threads have been joined
[2026-03-22 21:11:16] 2026-03-22 21:10:41,503 | INFO     | all data control threads have been joined
[2026-03-22 21:11:16] 2026-03-22 21:10:41,622 | INFO     | all job control threads have been joined
[2026-03-22 21:11:16] 2026-03-22 21:10:41,768 | INFO     | [job] retrieve thread has finished
[2026-03-22 21:11:16] 2026-03-22 21:10:41,871 | INFO     | [payload] validate_post thread has finished
[2026-03-22 21:11:16] 2026-03-22 21:10:42,014 | INFO     | [job] create_data_payload thread has finished
[2026-03-22 21:11:16] 2026-03-22 21:10:42,072 | INFO     | [data] copytool_in thread has finished
[2026-03-22 21:11:16] 2026-03-22 21:10:42,088 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-22 21:11:16] 2026-03-22 21:10:42,255 | INFO     | [job] job monitor thread has finished
[2026-03-22 21:11:16] 2026-03-22 21:10:42,326 | INFO     | [payload] validate_pre thread has finished
[2026-03-22 21:11:16] 2026-03-22 21:10:42,375 | INFO     | [payload] control thread has finished
[2026-03-22 21:11:16] 2026-03-22 21:10:42,508 | INFO     | [data] control thread has finished
[2026-03-22 21:11:16] 2026-03-22 21:10:42,572 | INFO     | [payload] execute_payloads thread has finished
[2026-03-22 21:11:16] 2026-03-22 21:10:42,604 | INFO     | [payload] failed_post thread has finished
[2026-03-22 21:11:16] 2026-03-22 21:10:42,627 | INFO     | [job] control thread has finished
[2026-03-22 21:11:16] 2026-03-22 21:10:42,922 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-22 21:11:16] 2026-03-22 21:10:43,090 | INFO     | [job] validate thread has finished
[2026-03-22 21:11:16] 2026-03-22 21:10:43,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-22 21:11:16] 2026-03-22 21:10:44,093 | INFO     | [data] copytool_out thread has finished
[2026-03-22 21:11:16] 2026-03-22 21:10:44,410 | INFO     | [job] queue monitor thread has finished
[2026-03-22 21:11:16] 2026-03-22 21:10:46,933 | INFO     | [data] queue_monitor thread has finished
[2026-03-22 21:11:16] 2026-03-22 21:10:51,662 | INFO     | job.realtimelogging is not enabled
[2026-03-22 21:11:16] 2026-03-22 21:10:52,667 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-22 21:11:16] 2026-03-22 21:11:08,908 | INFO     | [monitor] cgroup control has ended
[2026-03-22 21:11:16] 2026-03-22 21:11:10,746 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132423833122624)>', '<ExcThread(monitor, started 132423320835840)>']
[2026-03-22 21:11:16] 2026-03-22 21:11:11,268 | INFO     | PID=485877 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-22 21:11:16] 2026-03-22 21:11:11,268 | INFO     | .. there are 4 such processes running
[2026-03-22 21:11:16] 2026-03-22 21:11:11,268 | INFO     | found 0 job(s) in 20 queues
[2026-03-22 21:11:16] 2026-03-22 21:11:11,268 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-22 21:11:16] 2026-03-22 21:11:11,269 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-22 21:11:16] 2026-03-22 21:11:11,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-22 21:11:16] 2026-03-22 21:11:11,269 | INFO     | [monitor] control thread has ended
[2026-03-22 21:11:16] 2026-03-22 21:11:15,771 | INFO     | all workflow threads have been joined
[2026-03-22 21:11:16] 2026-03-22 21:11:15,771 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-22 21:11:16] 2026-03-22 21:11:15,771 | INFO     | traces error code: 0
[2026-03-22 21:11:16] 2026-03-22 21:11:15,772 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-22 21:11:16] 2026-03-22 21:11:15,947 [wrapper] ==== pilot stdout END ====
[2026-03-22 21:11:16] 2026-03-22 21:11:15,953 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-22 21:11:16] 2026-03-22 21:11:15,958 [wrapper] pilotpid: 485877
[2026-03-22 21:11:16] 2026-03-22 21:11:15,963 [wrapper] Pilot exit status: 0
[2026-03-22 21:11:16] 2026-03-22 21:11:15,984 [wrapper] pandaids: 7058647582
[2026-03-22 21:11:16] 2026-03-22 21:11:16,051 [wrapper] cleanup supervisor_pilot  511183 485878
[2026-03-22 21:11:16] 2026-03-22 21:11:16,056 [wrapper] Test setup, not cleaning
[2026-03-22 21:11:16] 2026-03-22 21:11:16,063 [wrapper] apfmon messages muted
[2026-03-22 21:11:16] 2026-03-22 21:11:16,068 [wrapper] ==== wrapper stdout END ====
[2026-03-22 21:11:16] 2026-03-22 21:11:16,074 [wrapper] ==== wrapper stderr END ====
[2026-03-22 21:11:16]  *** Error codes and diagnostics ***
[2026-03-22 21:11:16]     "exeErrorCode": 0,
[2026-03-22 21:11:16]     "exeErrorDiag": "",
[2026-03-22 21:11:16]     "pilotErrorCode": 0,
[2026-03-22 21:11:16]     "pilotErrorDiag": "",
[2026-03-22 21:11:16]  *** Listing of results directory ***
[2026-03-22 21:11:16] total 477868
[2026-03-22 21:11:16] -rw-r--r-- 1 boinc boinc    585013 M&#195;&#164;r 18 08:55 pilot3.tar.gz
[2026-03-22 21:11:16] -rwx------ 1 boinc boinc     36322 M&#195;&#164;r 18 08:55 runpilot2-wrapper.sh
[2026-03-22 21:11:16] -rw-r--r-- 1 boinc boinc      5111 M&#195;&#164;r 18 08:56 queuedata.json
[2026-03-22 21:11:16] -rw-rw-r-- 1 boinc boinc       100 M&#195;&#164;r 22 17:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-22 21:11:16] -rwxr-xr-x 1 boinc boinc      7986 M&#195;&#164;r 22 17:22 run_atlas
[2026-03-22 21:11:16] -rw-rw-r-- 1 boinc boinc       105 M&#195;&#164;r 22 17:22 job.xml
[2026-03-22 21:11:16] -rw-r--r-- 2 boinc boinc 254213249 M&#195;&#164;r 22 17:22 EVNT.49122102._000001.pool.root.1
[2026-03-22 21:11:16] -rw-r--r-- 2 boinc boinc     15845 M&#195;&#164;r 22 17:22 start_atlas.sh
[2026-03-22 21:11:16] drwxrwx--x 2 boinc boinc      4096 M&#195;&#164;r 22 17:22 shared
[2026-03-22 21:11:16] -rw-r--r-- 2 boinc boinc    597532 M&#195;&#164;r 22 17:22 input.tar.gz
[2026-03-22 21:11:16] -rw-rw-r-- 1 boinc boinc         0 M&#195;&#164;r 22 17:22 boinc_setup_complete
[2026-03-22 21:11:16] -rw-rw-r-- 1 boinc boinc      8936 M&#195;&#164;r 22 17:22 init_data.xml
[2026-03-22 21:11:16] -rw-rw-r-- 1 boinc boinc         0 M&#195;&#164;r 22 17:22 boinc_lockfile
[2026-03-22 21:11:16] -rw-rw-r-- 1 boinc boinc      2592 M&#195;&#164;r 22 17:22 pandaJob.out
[2026-03-22 21:11:16] -rw------- 1 boinc boinc   1010671 M&#195;&#164;r 22 17:22 agis_schedconf.cvmfs.json
[2026-03-22 21:11:16] -rw------- 1 boinc boinc       431 M&#195;&#164;r 22 17:22 workernode_map.json
[2026-03-22 21:11:16] drwx------ 5 boinc boinc      4096 M&#195;&#164;r 22 17:22 pilot3
[2026-03-22 21:11:16] -rw------- 1 boinc boinc 226236889 M&#195;&#164;r 22 21:09 HITS.49190121._000013.pool.root.1
[2026-03-22 21:11:16] -rw-rw-r-- 1 boinc boinc       532 M&#195;&#164;r 22 21:10 boinc_task_state.xml
[2026-03-22 21:11:16] -rw------- 1 boinc boinc      1026 M&#195;&#164;r 22 21:10 memory_monitor_summary.json
[2026-03-22 21:11:16] -rw------- 1 boinc boinc        95 M&#195;&#164;r 22 21:10 pilot_heartbeat.json
[2026-03-22 21:11:16] -rw------- 1 boinc boinc   1511579 M&#195;&#164;r 22 21:10 agis_ddmendpoints.agis.ALL.json
[2026-03-22 21:11:16] -rw------- 1 boinc boinc    516196 M&#195;&#164;r 22 21:10 log.49190121._000013.job.log.tgz.1
[2026-03-22 21:11:16] -rw------- 1 boinc boinc      6334 M&#195;&#164;r 22 21:10 heartbeat.json
[2026-03-22 21:11:16] -rw-rw-r-- 1 boinc boinc        29 M&#195;&#164;r 22 21:11 wrapper_checkpoint.txt
[2026-03-22 21:11:16] -rw-rw-r-- 1 boinc boinc      8192 M&#195;&#164;r 22 21:11 boinc_mmap_file
[2026-03-22 21:11:16] -rw------- 1 boinc boinc      5100 M&#195;&#164;r 22 21:11 pilotlog.txt
[2026-03-22 21:11:16] -rw------- 1 boinc boinc   1956440 M&#195;&#164;r 22 21:11 log.49190121._000013.job.log.1
[2026-03-22 21:11:16] -rw------- 1 boinc boinc       357 M&#195;&#164;r 22 21:11 output.list
[2026-03-22 21:11:16] -rw-rw-r-- 1 boinc boinc       620 M&#195;&#164;r 22 21:11 runtime_log
[2026-03-22 21:11:16] -rw------- 1 boinc boinc   2488320 M&#195;&#164;r 22 21:11 result.tar.gz
[2026-03-22 21:11:16] -rw------- 1 boinc boinc       658 M&#195;&#164;r 22 21:11 sRKKDm7r1M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmwwyLDmhV1IQo.diag
[2026-03-22 21:11:16] -rw-rw-r-- 1 boinc boinc      9172 M&#195;&#164;r 22 21:11 runtime_log.err
[2026-03-22 21:11:16] -rw-rw-r-- 1 boinc boinc     21057 M&#195;&#164;r 22 21:11 stderr.txt
[2026-03-22 21:11:16] HITS file was successfully produced:
[2026-03-22 21:11:16] -rw------- 1 boinc boinc 226236889 M&#195;&#164;r 22 21:09 shared/HITS.pool.root.1
[2026-03-22 21:11:16]  *** Contents of shared directory: ***
[2026-03-22 21:11:16] total 472228
[2026-03-22 21:11:16] -rw-r--r-- 2 boinc boinc 254213249 M&#195;&#164;r 22 17:22 ATLAS.root_0
[2026-03-22 21:11:16] -rw-r--r-- 2 boinc boinc     15845 M&#195;&#164;r 22 17:22 start_atlas.sh
[2026-03-22 21:11:16] -rw-r--r-- 2 boinc boinc    597532 M&#195;&#164;r 22 17:22 input.tar.gz
[2026-03-22 21:11:16] -rw------- 1 boinc boinc 226236889 M&#195;&#164;r 22 21:09 HITS.pool.root.1
[2026-03-22 21:11:16] -rw------- 1 boinc boinc   2488320 M&#195;&#164;r 22 21:11 result.tar.gz
21:11:17 (481703): run_atlas exited; CPU time 102943.762403
21:11:17 (481703): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN