Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
20:18:18 (441): wrapper (7.7.26015): starting
20:18:18 (441): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 20:18:18] Arguments: --nthreads 8
[2026-03-18 20:18:18] Threads: 8
[2026-03-18 20:18:18] Checking for CVMFS
[2026-03-18 20:18:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 20:18:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 20:18:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 20:18:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 20:18:18] 2.11.0.0 4525 133836 84828 157428 0 188 2225774 4096000 2643 130560 2 14594909 99.600 8924100 355 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-18 20:18:18] CVMFS is ok
[2026-03-18 20:18:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 20:18:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 20:18:18] Further information can be found at the LHC@home message board.
[2026-03-18 20:18:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 20:18:18] Checking for apptainer binary...
[2026-03-18 20:18:18] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-18 20:18:18] apptainer is not installed, using version from CVMFS
[2026-03-18 20:18:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 20:18:19] WARNING: Environment variable TMPDIR already has value [/tmp/job_11340727/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node047
[2026-03-18 20:18:19] apptainer works
[2026-03-18 20:18:19] Set ATHENA_PROC_NUMBER=8
[2026-03-18 20:18:19] Set ATHENA_CORE_NUMBER=8
[2026-03-18 20:18:19] Starting ATLAS job with PandaID=7058612966
[2026-03-18 20:18:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11340727/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 21:55:46]  *** The last 200 lines of the pilot log: ***
[2026-03-18 21:55:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-18 21:55:46]  is_altstaged=None
[2026-03-18 21:55:46]  is_tar=False
[2026-03-18 21:55:46]  lfn=log.49190023._000022.job.log.tgz.1
[2026-03-18 21:55:46]  mtime=0
[2026-03-18 21:55:46]  protocol_id=None
[2026-03-18 21:55:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-18 21:55:46]  replicas=None
[2026-03-18 21:55:46]  scope=mc23_13p6TeV
[2026-03-18 21:55:46]  status=None
[2026-03-18 21:55:46]  status_code=0
[2026-03-18 21:55:46]  storage_token=
[2026-03-18 21:55:46]  surl=/tmp/job_11340727/atlas/pilot/slots/0/PanDA_Pilot-7058612966/log.49190023._000022.job.log.tgz.1
[2026-03-18 21:55:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/d6/log.49190023._000022.job.log.tgz.1
[2026-03-18 21:55:46]  workdir=None
[2026-03-18 21:55:46] ]
[2026-03-18 21:55:46] 2026-03-18 20:55:12,662 | INFO     | transferring file log.49190023._000022.job.log.tgz.1 from /tmp/job_11340727/atlas/pilot/slots/0/PanDA_Pilot-7058612966/log.49190023._000022.job.log.tgz.1 to /tmp/j
[2026-03-18 21:55:46] 2026-03-18 20:55:12,662 | INFO     | executing command: /usr/bin/env mv /tmp/job_11340727/atlas/pilot/slots/0/PanDA_Pilot-7058612966/log.49190023._000022.job.log.tgz.1 /tmp/job_11340727/atlas/pilot/sl
[2026-03-18 21:55:46] 2026-03-18 20:55:12,671 | INFO     | adding to output.list: log.49190023._000022.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/d6/log.49190023._000022.job.log.tg
[2026-03-18 21:55:46] 2026-03-18 20:55:12,671 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-18 21:55:46] 2026-03-18 20:55:12,671 | INFO     | summary of transferred files:
[2026-03-18 21:55:46] 2026-03-18 20:55:12,671 | INFO     |  -- lfn=log.49190023._000022.job.log.tgz.1, status_code=0, status=transferred
[2026-03-18 21:55:46] 2026-03-18 20:55:12,671 | INFO     | stage-out finished correctly
[2026-03-18 21:55:46] 2026-03-18 20:55:13,094 | INFO     | time since job start (5807s) is within the limit (345600.0s)
[2026-03-18 21:55:46] 2026-03-18 20:55:13,949 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-18 21:55:46] 2026-03-18 20:55:13,995 | INFO     | job 7058612966 has state=finished
[2026-03-18 21:55:46] 2026-03-18 20:55:13,995 | INFO     | preparing for final server update for job 7058612966 in state='finished'
[2026-03-18 21:55:46] 2026-03-18 20:55:13,996 | INFO     | reading metadata from: /tmp/job_11340727/atlas/pilot/slots/0/PanDA_Pilot-7058612966/jobReport.json
[2026-03-18 21:55:46] 2026-03-18 20:55:13,997 | INFO     | added worker_node to metadata from /tmp/job_11340727/atlas/pilot/slots/0/workernode_map.json
[2026-03-18 21:55:46] 2026-03-18 20:55:13,997 | INFO     | this job has now completed (state=finished)
[2026-03-18 21:55:46] 2026-03-18 20:55:13,997 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 21:55:46] 2026-03-18 20:55:13,997 | INFO     | log transfer has been attempted: DONE
[2026-03-18 21:55:46] 2026-03-18 20:55:13,997 | INFO     | job 7058612966 has finished - writing final server update
[2026-03-18 21:55:46] 2026-03-18 20:55:13,997 | INFO     | total number of processed events: 400 (read)
[2026-03-18 21:55:46] 2026-03-18 20:55:14,016 | INFO     | using path: /tmp/job_11340727/atlas/pilot/slots/0/PanDA_Pilot-7058612966/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 21:55:46] 2026-03-18 20:55:14,016 | INFO     | extracted standard info from prmon json
[2026-03-18 21:55:46] 2026-03-18 20:55:14,016 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 21:55:46] 2026-03-18 20:55:14,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 21:55:46] 2026-03-18 20:55:14,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 21:55:46] 2026-03-18 20:55:14,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 21:55:46] 2026-03-18 20:55:14,017 | INFO     | fitting pss+swap vs Time
[2026-03-18 21:55:46] 2026-03-18 20:55:14,017 | INFO     | sum of square deviations: 211285822.0
[2026-03-18 21:55:46] 2026-03-18 20:55:14,018 | INFO     | sum of deviations: -1912155837.0000002
[2026-03-18 21:55:46] 2026-03-18 20:55:14,018 | INFO     | mean x: 1773864481.5
[2026-03-18 21:55:46] 2026-03-18 20:55:14,018 | INFO     | mean y: 2567067.7045454546
[2026-03-18 21:55:46] 2026-03-18 20:55:14,018 | INFO     | intersect: 16056201382.775644
[2026-03-18 21:55:46] 2026-03-18 20:55:14,018 | INFO     | chi2: 0.002945391016549367
[2026-03-18 21:55:46] 2026-03-18 20:55:14,018 | INFO     | current memory leak: -9.05 B/s (using 88 data points, chi2=0.00)
[2026-03-18 21:55:46] 2026-03-18 20:55:14,018 | INFO     | could have reported an average CPU frequency of 2520 MHz (7 samples)
[2026-03-18 21:55:46] 2026-03-18 20:55:14,018 | INFO     | ..............................
[2026-03-18 21:55:46] 2026-03-18 20:55:14,018 | INFO     | . Timing measurements:
[2026-03-18 21:55:46] 2026-03-18 20:55:14,018 | INFO     | . get job = 0 s
[2026-03-18 21:55:46] 2026-03-18 20:55:14,018 | INFO     | . initial setup = 2 s
[2026-03-18 21:55:46] 2026-03-18 20:55:14,018 | INFO     | . payload setup = 3 s
[2026-03-18 21:55:46] 2026-03-18 20:55:14,018 | INFO     | . stage-in = 0 s
[2026-03-18 21:55:46] 2026-03-18 20:55:14,018 | INFO     | . payload execution = 5788 s
[2026-03-18 21:55:46] 2026-03-18 20:55:14,018 | INFO     | . stage-out = 0 s
[2026-03-18 21:55:46] 2026-03-18 20:55:14,018 | INFO     | . log creation = 0 s
[2026-03-18 21:55:46] 2026-03-18 20:55:14,019 | INFO     | ..............................
[2026-03-18 21:55:46] 2026-03-18 20:55:14,180 | INFO     | 
[2026-03-18 21:55:46] 2026-03-18 20:55:14,180 | INFO     | job summary report
[2026-03-18 21:55:46] 2026-03-18 20:55:14,180 | INFO     | --------------------------------------------------
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | PanDA job id: 7058612966
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | task id: 49190023
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | errors: (none)
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | pilot state: finished 
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | transexitcode: 0
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | exeerrorcode: 0
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | exeerrordiag: 
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | exitcode: 0
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | exitmsg: OK
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | cpuconsumptiontime: 42960 s
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | nevents: 400
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | neventsw: 0
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | pid: 9290
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | pgrp: 9290
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | corecount: 8
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | event service: False
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | sizes: {0: 2280293, 11: 2280293, 5795: 2316192, 5797: 2316386}
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | --------------------------------------------------
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | 
[2026-03-18 21:55:46] 2026-03-18 20:55:14,181 | INFO     | executing command: ls -lF /tmp/job_11340727/atlas/pilot/slots/0
[2026-03-18 21:55:46] 2026-03-18 20:55:14,191 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,191 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,191 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,191 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,191 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,191 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,191 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,191 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,192 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,192 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,192 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,192 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,192 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,192 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,192 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,192 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,192 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,192 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 21:55:46] 2026-03-18 20:55:14,192 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,192 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 21:55:46] 2026-03-18 20:55:14,192 | INFO     | job 7058612966 has completed (purged errors)
[2026-03-18 21:55:46] 2026-03-18 20:55:14,192 | INFO     | overall cleanup function is called
[2026-03-18 21:55:46] 2026-03-18 20:55:15,198 | INFO     | --- collectZombieJob: --- 10, [9290]
[2026-03-18 21:55:46] 2026-03-18 20:55:15,198 | INFO     | zombie collector waiting for pid 9290
[2026-03-18 21:55:46] 2026-03-18 20:55:15,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 21:55:46] 2026-03-18 20:55:15,198 | INFO     | collected zombie processes
[2026-03-18 21:55:46] 2026-03-18 20:55:15,198 | INFO     | will attempt to kill all subprocesses of pid=9290
[2026-03-18 21:55:46] 2026-03-18 20:55:15,311 | INFO     | process IDs to be killed: [9290] (in reverse order)
[2026-03-18 21:55:46] 2026-03-18 20:55:15,351 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 21:55:46] 2026-03-18 20:55:15,351 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 21:55:46] 2026-03-18 20:55:15,356 | INFO     | did not find any defunct processes belonging to 9290
[2026-03-18 21:55:46] 2026-03-18 20:55:15,360 | INFO     | did not find any defunct processes belonging to 9290
[2026-03-18 21:55:46] 2026-03-18 20:55:15,360 | INFO     | ready for new job
[2026-03-18 21:55:46] 2026-03-18 20:55:15,360 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 21:55:46] 2026-03-18 20:55:15,360 | INFO     | **************************************
[2026-03-18 21:55:46] 2026-03-18 20:55:15,361 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 21:55:46] 2026-03-18 20:55:15,361 | INFO     | **************************************
[2026-03-18 21:55:46] 2026-03-18 20:55:15,361 | INFO     | 
[2026-03-18 21:55:46] 2026-03-18 20:55:15,375 | INFO     | architecture information:
[2026-03-18 21:55:46] 2026-03-18 20:55:15,375 | INFO     | executing command: cat /etc/os-release
[2026-03-18 21:55:46] 2026-03-18 20:55:15,381 | INFO     | cat /etc/os-release:
[2026-03-18 21:55:46] NAME="CentOS Linux"
[2026-03-18 21:55:46] VERSION="7 (Core)"
[2026-03-18 21:55:46] ID="centos"
[2026-03-18 21:55:46] ID_LIKE="rhel fedora"
[2026-03-18 21:55:46] VERSION_ID="7"
[2026-03-18 21:55:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 21:55:46] ANSI_COLOR="0;31"
[2026-03-18 21:55:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 21:55:46] HOME_URL="https://www.centos.org/"
[2026-03-18 21:55:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 21:55:46] 
[2026-03-18 21:55:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 21:55:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 21:55:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 21:55:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 21:55:46] 
[2026-03-18 21:55:46] 2026-03-18 20:55:15,381 | INFO     | **************************************
[2026-03-18 21:55:46] 2026-03-18 20:55:15,884 | INFO     | executing command: df -mP /tmp/job_11340727/atlas/pilot/slots/0
[2026-03-18 21:55:46] 2026-03-18 20:55:15,891 | INFO     | sufficient remaining disk space (224425672704 B)
[2026-03-18 21:55:46] 2026-03-18 20:55:15,891 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 21:55:46] 2026-03-18 20:55:15,891 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 21:55:46] 2026-03-18 20:55:15,891 | INFO     | update_server=False
[2026-03-18 21:55:46] 2026-03-18 20:55:15,891 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 21:55:46] 2026-03-18 20:55:15,891 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 21:55:46] 2026-03-18 20:55:15,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 21:55:46] 2026-03-18 20:55:15,891 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 21:55:46] 2026-03-18 20:55:16,135 | INFO     | all data control threads have been joined
[2026-03-18 21:55:46] 2026-03-18 20:55:16,890 | INFO     | all payload control threads have been joined
[2026-03-18 21:55:46] 2026-03-18 20:55:16,896 | INFO     | [job] retrieve thread has finished
[2026-03-18 21:55:46] 2026-03-18 20:55:16,897 | INFO     | [job] queue monitor thread has finished
[2026-03-18 21:55:46] 2026-03-18 20:55:17,026 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 21:55:46] 2026-03-18 20:55:17,140 | INFO     | [data] control thread has finished
[2026-03-18 21:55:46] 2026-03-18 20:55:17,155 | INFO     | [data] copytool_in thread has finished
[2026-03-18 21:55:46] 2026-03-18 20:55:17,474 | INFO     | all job control threads have been joined
[2026-03-18 21:55:46] 2026-03-18 20:55:17,737 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 21:55:46] 2026-03-18 20:55:17,840 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 21:55:46] 2026-03-18 20:55:17,895 | INFO     | [payload] control thread has finished
[2026-03-18 21:55:46] 2026-03-18 20:55:17,897 | INFO     | [data] copytool_out thread has finished
[2026-03-18 21:55:46] 2026-03-18 20:55:18,084 | INFO     | [payload] validate_post thread has finished
[2026-03-18 21:55:46] 2026-03-18 20:55:18,115 | INFO     | [job] validate thread has finished
[2026-03-18 21:55:46] 2026-03-18 20:55:18,370 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 21:55:46] 2026-03-18 20:55:18,417 | INFO     | [payload] failed_post thread has finished
[2026-03-18 21:55:46] 2026-03-18 20:55:18,480 | INFO     | [job] control thread has finished
[2026-03-18 21:55:46] 2026-03-18 20:55:19,128 | WARNING  | process 9290 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 21:55:46] 2026-03-18 20:55:19,213 | INFO     | using path: /tmp/job_11340727/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 21:55:46] 2026-03-18 20:55:19,322 | INFO     | number of running child processes to parent process 9290: 1
[2026-03-18 21:55:46] 2026-03-18 20:55:19,322 | INFO     | maximum number of monitored processes: 6
[2026-03-18 21:55:46] 2026-03-18 20:55:19,322 | INFO     | aborting job monitoring since job object (job id=7058612966) has expired
[2026-03-18 21:55:46] 2026-03-18 20:55:19,322 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 21:55:46] 2026-03-18 20:55:19,322 | INFO     | will abort loop
[2026-03-18 21:55:46] 2026-03-18 20:55:19,897 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 21:55:46] 2026-03-18 20:55:20,327 | INFO     | [job] job monitor thread has finished
[2026-03-18 21:55:46] 2026-03-18 20:55:34,998 | INFO     | [monitor] cgroup control has ended
[2026-03-18 21:55:46] 2026-03-18 20:55:36,903 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456067393280)>']
[2026-03-18 21:55:46] 2026-03-18 20:55:41,928 | INFO     | all workflow threads have been joined
[2026-03-18 21:55:46] 2026-03-18 20:55:41,928 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 21:55:46] 2026-03-18 20:55:41,929 | INFO     | traces error code: 0
[2026-03-18 21:55:46] 2026-03-18 20:55:41,929 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 21:55:46] 2026-03-18 20:55:46,291 | INFO     | PID=4704 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-18 21:55:46] 2026-03-18 20:55:46,292 | INFO     | .. there are 6 such processes running
[2026-03-18 21:55:46] 2026-03-18 20:55:46,292 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 21:55:46] 2026-03-18 20:55:46,292 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 21:55:46] 2026-03-18 20:55:46,292 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 21:55:46] 2026-03-18 20:55:46,292 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 21:55:46] 2026-03-18 20:55:46,292 | CRITICAL | thread 'MainThread' is not alive
[2026-03-18 21:55:46] 2026-03-18 20:55:46,292 | INFO     | [monitor] control thread has ended
[2026-03-18 21:55:46] 2026-03-18 20:55:46,342 [wrapper] ==== pilot stdout END ====
[2026-03-18 21:55:46] 2026-03-18 20:55:46,344 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 21:55:46] 2026-03-18 20:55:46,345 [wrapper] pilotpid: 4704
[2026-03-18 21:55:46] 2026-03-18 20:55:46,346 [wrapper] Pilot exit status: 0
[2026-03-18 21:55:46] 2026-03-18 20:55:46,350 [wrapper] pandaids: 7058612966
[2026-03-18 21:55:46] 2026-03-18 20:55:46,376 [wrapper] cleanup supervisor_pilot 22013 4705
[2026-03-18 21:55:46] 2026-03-18 20:55:46,377 [wrapper] Test setup, not cleaning
[2026-03-18 21:55:46] 2026-03-18 20:55:46,378 [wrapper] apfmon messages muted
[2026-03-18 21:55:46] 2026-03-18 20:55:46,379 [wrapper] ==== wrapper stdout END ====
[2026-03-18 21:55:46] 2026-03-18 20:55:46,381 [wrapper] ==== wrapper stderr END ====
[2026-03-18 21:55:46]  *** Error codes and diagnostics ***
[2026-03-18 21:55:46]     "exeErrorCode": 0,
[2026-03-18 21:55:46]     "exeErrorDiag": "",
[2026-03-18 21:55:46]     "pilotErrorCode": 0,
[2026-03-18 21:55:46]     "pilotErrorDiag": "",
[2026-03-18 21:55:46]  *** Listing of results directory ***
[2026-03-18 21:55:46] total 482312
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user    585013 Mar 18 09:55 pilot3.tar.gz
[2026-03-18 21:55:46] -rwx------ 1 mf493845 unix-user     36322 Mar 18 09:55 runpilot2-wrapper.sh
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user      5111 Mar 18 09:56 queuedata.json
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user       100 Mar 18 19:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 21:55:46] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 18 19:13 run_atlas
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user       105 Mar 18 19:13 job.xml
[2026-03-18 21:55:46] -rw-r--r-- 2 mf493845 unix-user 253705902 Mar 18 20:18 EVNT.49121817._000001.pool.root.1
[2026-03-18 21:55:46] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 18 20:18 start_atlas.sh
[2026-03-18 21:55:46] drwxrwx--x 2 mf493845 unix-user       100 Mar 18 20:18 shared
[2026-03-18 21:55:46] -rw-r--r-- 2 mf493845 unix-user    597531 Mar 18 20:18 input.tar.gz
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user      6390 Mar 18 20:18 init_data.xml
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user         0 Mar 18 20:18 boinc_setup_complete
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user      8192 Mar 18 20:18 boinc_mmap_file
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user         0 Mar 18 20:18 boinc_lockfile
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user      2597 Mar 18 20:18 pandaJob.out
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user   1010358 Mar 18 20:18 agis_schedconf.cvmfs.json
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user   1511579 Mar 18 20:18 agis_ddmendpoints.agis.ALL.json
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user       420 Mar 18 20:18 workernode_map.json
[2026-03-18 21:55:46] drwx------ 5 mf493845 unix-user       440 Mar 18 20:18 pilot3
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user 233836075 Mar 18 21:54 HITS.49190023._000022.pool.root.1
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user      1011 Mar 18 21:55 memory_monitor_summary.json
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user    352050 Mar 18 21:55 log.49190023._000022.job.log.tgz.1
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user      6296 Mar 18 21:55 heartbeat.json
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user       889 Mar 18 21:55 pilotlog.txt
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user        95 Mar 18 21:55 pilot_heartbeat.json
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user    864444 Mar 18 21:55 log.49190023._000022.job.log.1
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user       357 Mar 18 21:55 output.list
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user       620 Mar 18 21:55 runtime_log
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user   1239040 Mar 18 21:55 result.tar.gz
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user      9219 Mar 18 21:55 runtime_log.err
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user       642 Mar 18 21:55 c17NDm6r1M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmhwyLDmdUmDpm.diag
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user     21895 Mar 18 21:55 stderr.txt
[2026-03-18 21:55:46] HITS file was successfully produced:
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user 233836075 Mar 18 21:54 shared/HITS.pool.root.1
[2026-03-18 21:55:46]  *** Contents of shared directory: ***
[2026-03-18 21:55:46] total 477928
[2026-03-18 21:55:46] -rw-r--r-- 2 mf493845 unix-user 253705902 Mar 18 20:18 ATLAS.root_0
[2026-03-18 21:55:46] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 18 20:18 start_atlas.sh
[2026-03-18 21:55:46] -rw-r--r-- 2 mf493845 unix-user    597531 Mar 18 20:18 input.tar.gz
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user 233836075 Mar 18 21:54 HITS.pool.root.1
[2026-03-18 21:55:46] -rw------- 1 mf493845 unix-user   1239040 Mar 18 21:55 result.tar.gz
21:55:48 (441): run_atlas exited; CPU time 43049.766142
21:55:48 (441): called boinc_finish(0)

</stderr_txt>
]]>

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