Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
20:01:56 (6664): wrapper (7.7.26015): starting
20:01:56 (6664): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 20:01:56] Arguments: --nthreads 8
[2026-03-18 20:01:56] Threads: 8
[2026-03-18 20:01:56] Checking for CVMFS
[2026-03-18 20:01:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 20:01:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 20:01:56] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 20:01:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 20:01:57] 2.11.0.0 6744 20572 66496 157426 0 49 2162703 4096001 0 130560 0 4234375 99.829 1394723 269 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-18 20:01:57] CVMFS is ok
[2026-03-18 20:01:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 20:01:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 20:01:57] Further information can be found at the LHC@home message board.
[2026-03-18 20:01:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 20:01:57] Checking for apptainer binary...
[2026-03-18 20:01:57] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-18 20:01:57] apptainer is not installed, using version from CVMFS
[2026-03-18 20:01:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 20:01:57] WARNING: Environment variable TMPDIR already has value [/tmp/job_11340753/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node149
[2026-03-18 20:01:57] apptainer works
[2026-03-18 20:01:57] Set ATHENA_PROC_NUMBER=8
[2026-03-18 20:01:57] Set ATHENA_CORE_NUMBER=8
[2026-03-18 20:01:57] Starting ATLAS job with PandaID=7049376412
[2026-03-18 20:01:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11340753/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 20:57:35]  *** The last 200 lines of the pilot log: ***
[2026-03-18 20:57:35]  filesize=306588
[2026-03-18 20:57:35]  filetype=log
[2026-03-18 20:57:35]  guid=26f980bd-dc15-4e63-af68-3d35ef362374
[2026-03-18 20:57:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-18 20:57:35]  is_altstaged=None
[2026-03-18 20:57:35]  is_tar=False
[2026-03-18 20:57:35]  lfn=log.48967085._005165.job.log.tgz.1
[2026-03-18 20:57:35]  mtime=0
[2026-03-18 20:57:35]  protocol_id=None
[2026-03-18 20:57:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-18 20:57:35]  replicas=None
[2026-03-18 20:57:35]  scope=mc23_13p6TeV
[2026-03-18 20:57:35]  status=None
[2026-03-18 20:57:35]  status_code=0
[2026-03-18 20:57:35]  storage_token=
[2026-03-18 20:57:35]  surl=/tmp/job_11340753/atlas/pilot/slots/0/PanDA_Pilot-7049376412/log.48967085._005165.job.log.tgz.1
[2026-03-18 20:57:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/58/log.48967085._005165.job.log.tgz.1
[2026-03-18 20:57:35]  workdir=None
[2026-03-18 20:57:35] ]
[2026-03-18 20:57:35] 2026-03-18 19:57:00,632 | INFO     | transferring file log.48967085._005165.job.log.tgz.1 from /tmp/job_11340753/atlas/pilot/slots/0/PanDA_Pilot-7049376412/log.48967085._005165.job.log.tgz.1 to /tmp/j
[2026-03-18 20:57:35] 2026-03-18 19:57:00,632 | INFO     | executing command: /usr/bin/env mv /tmp/job_11340753/atlas/pilot/slots/0/PanDA_Pilot-7049376412/log.48967085._005165.job.log.tgz.1 /tmp/job_11340753/atlas/pilot/sl
[2026-03-18 20:57:35] 2026-03-18 19:57:00,640 | INFO     | adding to output.list: log.48967085._005165.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/58/log.48967085._005165.job.log.tg
[2026-03-18 20:57:35] 2026-03-18 19:57:00,640 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-18 20:57:35] 2026-03-18 19:57:00,640 | INFO     | summary of transferred files:
[2026-03-18 20:57:35] 2026-03-18 19:57:00,640 | INFO     |  -- lfn=log.48967085._005165.job.log.tgz.1, status_code=0, status=transferred
[2026-03-18 20:57:35] 2026-03-18 19:57:00,640 | INFO     | stage-out finished correctly
[2026-03-18 20:57:35] 2026-03-18 19:57:01,756 | INFO     | time since job start (3297s) is within the limit (345600.0s)
[2026-03-18 20:57:35] 2026-03-18 19:57:01,789 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-18 20:57:35] 2026-03-18 19:57:02,130 | INFO     | monitor loop #251: job 0:7049376412 is in state 'finished'
[2026-03-18 20:57:35] 2026-03-18 19:57:02,131 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-18 20:57:35] 2026-03-18 19:57:03,102 | INFO     | job 7049376412 has state=finished
[2026-03-18 20:57:35] 2026-03-18 19:57:03,103 | INFO     | preparing for final server update for job 7049376412 in state='finished'
[2026-03-18 20:57:35] 2026-03-18 19:57:03,103 | INFO     | reading metadata from: /tmp/job_11340753/atlas/pilot/slots/0/PanDA_Pilot-7049376412/jobReport.json
[2026-03-18 20:57:35] 2026-03-18 19:57:03,104 | INFO     | added worker_node to metadata from /tmp/job_11340753/atlas/pilot/slots/0/workernode_map.json
[2026-03-18 20:57:35] 2026-03-18 19:57:03,104 | INFO     | this job has now completed (state=finished)
[2026-03-18 20:57:35] 2026-03-18 19:57:03,104 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 20:57:35] 2026-03-18 19:57:03,104 | INFO     | log transfer has been attempted: DONE
[2026-03-18 20:57:35] 2026-03-18 19:57:03,104 | INFO     | job 7049376412 has finished - writing final server update
[2026-03-18 20:57:35] 2026-03-18 19:57:03,104 | INFO     | total number of processed events: 400 (read)
[2026-03-18 20:57:35] 2026-03-18 19:57:03,123 | INFO     | using path: /tmp/job_11340753/atlas/pilot/slots/0/PanDA_Pilot-7049376412/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 20:57:35] 2026-03-18 19:57:03,123 | INFO     | extracted standard info from prmon json
[2026-03-18 20:57:35] 2026-03-18 19:57:03,123 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 20:57:35] 2026-03-18 19:57:03,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 20:57:35] 2026-03-18 19:57:03,123 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 20:57:35] 2026-03-18 19:57:03,123 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 20:57:35] 2026-03-18 19:57:03,124 | INFO     | fitting pss+swap vs Time
[2026-03-18 20:57:35] 2026-03-18 19:57:03,124 | INFO     | sum of square deviations: 32179208.0
[2026-03-18 20:57:35] 2026-03-18 19:57:03,124 | INFO     | sum of deviations: -317705080.00000006
[2026-03-18 20:57:35] 2026-03-18 19:57:03,124 | INFO     | mean x: 1773862250.0
[2026-03-18 20:57:35] 2026-03-18 19:57:03,124 | INFO     | mean y: 2524271.8936170214
[2026-03-18 20:57:35] 2026-03-18 19:57:03,124 | INFO     | intersect: 17515853004.074657
[2026-03-18 20:57:35] 2026-03-18 19:57:03,124 | INFO     | chi2: 0.0005144303669750798
[2026-03-18 20:57:35] 2026-03-18 19:57:03,124 | INFO     | current memory leak: -9.87 B/s (using 47 data points, chi2=0.00)
[2026-03-18 20:57:35] 2026-03-18 19:57:03,124 | INFO     | could have reported an average CPU frequency of 2365 MHz (5 samples)
[2026-03-18 20:57:35] 2026-03-18 19:57:03,124 | INFO     | ..............................
[2026-03-18 20:57:35] 2026-03-18 19:57:03,125 | INFO     | . Timing measurements:
[2026-03-18 20:57:35] 2026-03-18 19:57:03,125 | INFO     | . get job = 0 s
[2026-03-18 20:57:35] 2026-03-18 19:57:03,125 | INFO     | . initial setup = 3 s
[2026-03-18 20:57:35] 2026-03-18 19:57:03,125 | INFO     | . payload setup = 3 s
[2026-03-18 20:57:35] 2026-03-18 19:57:03,125 | INFO     | . stage-in = 0 s
[2026-03-18 20:57:35] 2026-03-18 19:57:03,125 | INFO     | . payload execution = 3276 s
[2026-03-18 20:57:35] 2026-03-18 19:57:03,125 | INFO     | . stage-out = 0 s
[2026-03-18 20:57:35] 2026-03-18 19:57:03,125 | INFO     | . log creation = 0 s
[2026-03-18 20:57:35] 2026-03-18 19:57:03,125 | INFO     | ..............................
[2026-03-18 20:57:35] 2026-03-18 19:57:03,171 | INFO     | 
[2026-03-18 20:57:35] 2026-03-18 19:57:03,171 | INFO     | job summary report
[2026-03-18 20:57:35] 2026-03-18 19:57:03,171 | INFO     | --------------------------------------------------
[2026-03-18 20:57:35] 2026-03-18 19:57:03,171 | INFO     | PanDA job id: 7049376412
[2026-03-18 20:57:35] 2026-03-18 19:57:03,171 | INFO     | task id: 48967085
[2026-03-18 20:57:35] 2026-03-18 19:57:03,171 | INFO     | errors: (none)
[2026-03-18 20:57:35] 2026-03-18 19:57:03,171 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 20:57:35] 2026-03-18 19:57:03,171 | INFO     | pilot state: finished 
[2026-03-18 20:57:35] 2026-03-18 19:57:03,171 | INFO     | transexitcode: 0
[2026-03-18 20:57:35] 2026-03-18 19:57:03,171 | INFO     | exeerrorcode: 0
[2026-03-18 20:57:35] 2026-03-18 19:57:03,171 | INFO     | exeerrordiag: 
[2026-03-18 20:57:35] 2026-03-18 19:57:03,171 | INFO     | exitcode: 0
[2026-03-18 20:57:35] 2026-03-18 19:57:03,171 | INFO     | exitmsg: OK
[2026-03-18 20:57:35] 2026-03-18 19:57:03,171 | INFO     | cpuconsumptiontime: 24000 s
[2026-03-18 20:57:35] 2026-03-18 19:57:03,171 | INFO     | nevents: 400
[2026-03-18 20:57:35] 2026-03-18 19:57:03,172 | INFO     | neventsw: 0
[2026-03-18 20:57:35] 2026-03-18 19:57:03,172 | INFO     | pid: 17786
[2026-03-18 20:57:35] 2026-03-18 19:57:03,172 | INFO     | pgrp: 17786
[2026-03-18 20:57:35] 2026-03-18 19:57:03,172 | INFO     | corecount: 8
[2026-03-18 20:57:35] 2026-03-18 19:57:03,172 | INFO     | event service: False
[2026-03-18 20:57:35] 2026-03-18 19:57:03,172 | INFO     | sizes: {0: 2279820, 1: 2280392, 11: 2280392, 3283: 2306005, 3284: 2306004, 3285: 2315088, 3286: 2315272, 3288: 2315498}
[2026-03-18 20:57:35] 2026-03-18 19:57:03,172 | INFO     | --------------------------------------------------
[2026-03-18 20:57:35] 2026-03-18 19:57:03,172 | INFO     | 
[2026-03-18 20:57:35] 2026-03-18 19:57:03,172 | INFO     | executing command: ls -lF /tmp/job_11340753/atlas/pilot/slots/0
[2026-03-18 20:57:35] 2026-03-18 19:57:03,182 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,182 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,182 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,182 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,182 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,182 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,183 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,183 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,183 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,183 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,183 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,183 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,183 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,183 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,183 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,183 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,183 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 20:57:35] 2026-03-18 19:57:03,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,183 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 20:57:35] 2026-03-18 19:57:03,183 | INFO     | job 7049376412 has completed (purged errors)
[2026-03-18 20:57:35] 2026-03-18 19:57:03,183 | INFO     | overall cleanup function is called
[2026-03-18 20:57:35] 2026-03-18 19:57:04,189 | INFO     | --- collectZombieJob: --- 10, [17786]
[2026-03-18 20:57:35] 2026-03-18 19:57:04,189 | INFO     | zombie collector waiting for pid 17786
[2026-03-18 20:57:35] 2026-03-18 19:57:04,189 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 20:57:35] 2026-03-18 19:57:04,189 | INFO     | collected zombie processes
[2026-03-18 20:57:35] 2026-03-18 19:57:04,189 | INFO     | will attempt to kill all subprocesses of pid=17786
[2026-03-18 20:57:35] 2026-03-18 19:57:04,298 | INFO     | process IDs to be killed: [17786] (in reverse order)
[2026-03-18 20:57:35] 2026-03-18 19:57:04,336 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 20:57:35] 2026-03-18 19:57:04,336 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 20:57:35] 2026-03-18 19:57:04,340 | INFO     | did not find any defunct processes belonging to 17786
[2026-03-18 20:57:35] 2026-03-18 19:57:04,343 | INFO     | did not find any defunct processes belonging to 17786
[2026-03-18 20:57:35] 2026-03-18 19:57:04,344 | INFO     | ready for new job
[2026-03-18 20:57:35] 2026-03-18 19:57:04,344 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 20:57:35] 2026-03-18 19:57:04,344 | INFO     | **************************************
[2026-03-18 20:57:35] 2026-03-18 19:57:04,344 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 20:57:35] 2026-03-18 19:57:04,344 | INFO     | **************************************
[2026-03-18 20:57:35] 2026-03-18 19:57:04,344 | INFO     | 
[2026-03-18 20:57:35] 2026-03-18 19:57:04,359 | INFO     | architecture information:
[2026-03-18 20:57:35] 2026-03-18 19:57:04,359 | INFO     | executing command: cat /etc/os-release
[2026-03-18 20:57:35] 2026-03-18 19:57:04,365 | INFO     | cat /etc/os-release:
[2026-03-18 20:57:35] NAME="CentOS Linux"
[2026-03-18 20:57:35] VERSION="7 (Core)"
[2026-03-18 20:57:35] ID="centos"
[2026-03-18 20:57:35] ID_LIKE="rhel fedora"
[2026-03-18 20:57:35] VERSION_ID="7"
[2026-03-18 20:57:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 20:57:35] ANSI_COLOR="0;31"
[2026-03-18 20:57:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 20:57:35] HOME_URL="https://www.centos.org/"
[2026-03-18 20:57:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 20:57:35] 
[2026-03-18 20:57:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 20:57:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 20:57:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 20:57:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 20:57:35] 
[2026-03-18 20:57:35] 2026-03-18 19:57:04,366 | INFO     | **************************************
[2026-03-18 20:57:35] 2026-03-18 19:57:04,868 | INFO     | executing command: df -mP /tmp/job_11340753/atlas/pilot/slots/0
[2026-03-18 20:57:35] 2026-03-18 19:57:04,875 | INFO     | sufficient remaining disk space (225118781440 B)
[2026-03-18 20:57:35] 2026-03-18 19:57:04,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 20:57:35] 2026-03-18 19:57:04,875 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 20:57:35] 2026-03-18 19:57:04,875 | INFO     | update_server=False
[2026-03-18 20:57:35] 2026-03-18 19:57:04,875 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 20:57:35] 2026-03-18 19:57:04,875 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 20:57:35] 2026-03-18 19:57:05,494 | INFO     | all data control threads have been joined
[2026-03-18 20:57:35] 2026-03-18 19:57:05,643 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 20:57:35] 2026-03-18 19:57:05,644 | INFO     | aborting loop
[2026-03-18 20:57:35] 2026-03-18 19:57:05,881 | INFO     | [job] retrieve thread has finished
[2026-03-18 20:57:35] 2026-03-18 19:57:05,881 | INFO     | [job] queue monitor thread has finished
[2026-03-18 20:57:35] 2026-03-18 19:57:05,911 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 20:57:35] 2026-03-18 19:57:05,946 | INFO     | [payload] failed_post thread has finished
[2026-03-18 20:57:35] 2026-03-18 19:57:06,196 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 20:57:35] 2026-03-18 19:57:06,252 | INFO     | all payload control threads have been joined
[2026-03-18 20:57:35] 2026-03-18 19:57:06,290 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 20:57:35] 2026-03-18 19:57:06,300 | INFO     | [job] validate thread has finished
[2026-03-18 20:57:35] 2026-03-18 19:57:06,407 | INFO     | all job control threads have been joined
[2026-03-18 20:57:35] 2026-03-18 19:57:06,443 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 20:57:35] 2026-03-18 19:57:06,443 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 20:57:35] 2026-03-18 19:57:06,499 | INFO     | [data] control thread has finished
[2026-03-18 20:57:35] 2026-03-18 19:57:06,499 | INFO     | [payload] validate_post thread has finished
[2026-03-18 20:57:35] 2026-03-18 19:57:06,649 | INFO     | [job] job monitor thread has finished
[2026-03-18 20:57:35] 2026-03-18 19:57:06,743 | INFO     | [data] copytool_in thread has finished
[2026-03-18 20:57:35] 2026-03-18 19:57:07,258 | INFO     | [payload] control thread has finished
[2026-03-18 20:57:35] 2026-03-18 19:57:07,412 | INFO     | [job] control thread has finished
[2026-03-18 20:57:35] 2026-03-18 19:57:07,842 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 20:57:35] 2026-03-18 19:57:08,201 | INFO     | [data] copytool_out thread has finished
[2026-03-18 20:57:35] 2026-03-18 19:57:09,717 | INFO     | [monitor] cgroup control has ended
[2026-03-18 20:57:35] 2026-03-18 19:57:11,848 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 20:57:35] 2026-03-18 19:57:12,650 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-18 20:57:35] 2026-03-18 19:57:17,674 | INFO     | all workflow threads have been joined
[2026-03-18 20:57:35] 2026-03-18 19:57:17,674 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 20:57:35] 2026-03-18 19:57:17,674 | INFO     | traces error code: 0
[2026-03-18 20:57:35] 2026-03-18 19:57:17,674 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 20:57:35] 2026-03-18 19:57:34,952 | INFO     | PID=11826 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 20:57:35] 2026-03-18 19:57:34,952 | INFO     | .. there are 6 such processes running
[2026-03-18 20:57:35] 2026-03-18 19:57:34,952 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 20:57:35] 2026-03-18 19:57:34,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 20:57:35] 2026-03-18 19:57:34,952 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 20:57:35] 2026-03-18 19:57:34,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 20:57:35] 2026-03-18 19:57:34,952 | CRITICAL | thread 'MainThread' is not alive
[2026-03-18 20:57:35] 2026-03-18 19:57:34,952 | INFO     | [monitor] control thread has ended
[2026-03-18 20:57:35] 2026-03-18 19:57:35,004 [wrapper] ==== pilot stdout END ====
[2026-03-18 20:57:35] 2026-03-18 19:57:35,006 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 20:57:35] 2026-03-18 19:57:35,007 [wrapper] pilotpid: 11826
[2026-03-18 20:57:35] 2026-03-18 19:57:35,008 [wrapper] Pilot exit status: 0
[2026-03-18 20:57:35] 2026-03-18 19:57:35,013 [wrapper] pandaids: 7049376412
[2026-03-18 20:57:35] 2026-03-18 19:57:35,038 [wrapper] cleanup supervisor_pilot 31488 11827
[2026-03-18 20:57:35] 2026-03-18 19:57:35,039 [wrapper] Test setup, not cleaning
[2026-03-18 20:57:35] 2026-03-18 19:57:35,040 [wrapper] apfmon messages muted
[2026-03-18 20:57:35] 2026-03-18 19:57:35,042 [wrapper] ==== wrapper stdout END ====
[2026-03-18 20:57:35] 2026-03-18 19:57:35,043 [wrapper] ==== wrapper stderr END ====
[2026-03-18 20:57:35]  *** Error codes and diagnostics ***
[2026-03-18 20:57:35]     "exeErrorCode": 0,
[2026-03-18 20:57:35]     "exeErrorDiag": "",
[2026-03-18 20:57:35]     "pilotErrorCode": 0,
[2026-03-18 20:57:35]     "pilotErrorDiag": "",
[2026-03-18 20:57:35]  *** Listing of results directory ***
[2026-03-18 20:57:35] total 404140
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user    585013 Mar 11 03:46 pilot3.tar.gz
[2026-03-18 20:57:35] -rwx------ 1 mf493845 unix-user     36322 Mar 11 03:47 runpilot2-wrapper.sh
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user      5111 Mar 11 03:49 queuedata.json
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user       100 Mar 18 19:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 20:57:35] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 18 19:07 run_atlas
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user       105 Mar 18 19:07 job.xml
[2026-03-18 20:57:35] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 18 20:01 start_atlas.sh
[2026-03-18 20:57:35] drwxrwx--x 2 mf493845 unix-user       100 Mar 18 20:01 shared
[2026-03-18 20:57:35] -rw-r--r-- 2 mf493845 unix-user    597520 Mar 18 20:01 input.tar.gz
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user      6391 Mar 18 20:01 init_data.xml
[2026-03-18 20:57:35] -rw-r--r-- 2 mf493845 unix-user 213070654 Mar 18 20:01 EVNT.48967083._000207.pool.root.1
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user         0 Mar 18 20:01 boinc_setup_complete
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user      8192 Mar 18 20:01 boinc_mmap_file
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user         0 Mar 18 20:01 boinc_lockfile
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user      2561 Mar 18 20:01 pandaJob.out
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user   1010350 Mar 18 20:02 agis_schedconf.cvmfs.json
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user   1511579 Mar 18 20:02 agis_ddmendpoints.agis.ALL.json
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user       414 Mar 18 20:02 workernode_map.json
[2026-03-18 20:57:35] drwx------ 5 mf493845 unix-user       440 Mar 18 20:02 pilot3
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user 195219687 Mar 18 20:56 HITS.48967085._005165.pool.root.1
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user        95 Mar 18 20:56 pilot_heartbeat.json
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user      1013 Mar 18 20:56 memory_monitor_summary.json
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user    306588 Mar 18 20:57 log.48967085._005165.job.log.tgz.1
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user      6303 Mar 18 20:57 heartbeat.json
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user       890 Mar 18 20:57 pilotlog.txt
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user    511139 Mar 18 20:57 log.48967085._005165.job.log.1
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user       357 Mar 18 20:57 output.list
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user       620 Mar 18 20:57 runtime_log
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user    839680 Mar 18 20:57 result.tar.gz
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user       643 Mar 18 20:57 YJpNDm4mOK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmIHfLDmh8NHPn.diag
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user      9219 Mar 18 20:57 runtime_log.err
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user     21715 Mar 18 20:57 stderr.txt
[2026-03-18 20:57:35] HITS file was successfully produced:
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user 195219687 Mar 18 20:56 shared/HITS.pool.root.1
[2026-03-18 20:57:35]  *** Contents of shared directory: ***
[2026-03-18 20:57:35] total 400148
[2026-03-18 20:57:35] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 18 20:01 start_atlas.sh
[2026-03-18 20:57:35] -rw-r--r-- 2 mf493845 unix-user    597520 Mar 18 20:01 input.tar.gz
[2026-03-18 20:57:35] -rw-r--r-- 2 mf493845 unix-user 213070654 Mar 18 20:01 ATLAS.root_0
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user 195219687 Mar 18 20:56 HITS.pool.root.1
[2026-03-18 20:57:35] -rw------- 1 mf493845 unix-user    839680 Mar 18 20:57 result.tar.gz
20:57:37 (6664): run_atlas exited; CPU time 24046.431375
20:57:37 (6664): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN