Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:49:56 (602712): wrapper (7.7.26015): starting
11:49:56 (602712): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 11:49:56] Arguments: --nthreads 8
[2026-03-18 11:49:56] Threads: 8
[2026-03-18 11:49:56] Checking for CVMFS
[2026-03-18 11:49:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 11:49:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 11:49:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 11:49:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 11:49:58] 2.13.3.0 12357 191485 399608 157422 3 633 17841404 32503809 52437 16776704 0 2579078535 99.633 2431609474 46209 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-18 11:49:58] CVMFS is ok
[2026-03-18 11:49:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 11:49:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 11:49:58] Further information can be found at the LHC@home message board.
[2026-03-18 11:49:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 11:49:58] Checking for apptainer binary...
[2026-03-18 11:49:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 11:49:58] Running /usr/bin/apptainer --version
[2026-03-18 11:49:58] apptainer version 1.4.5-2.el9
[2026-03-18 11:49:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 11:49:59] c8-7-2.aglt2.org
[2026-03-18 11:49:59] apptainer works
[2026-03-18 11:49:59] Set ATHENA_PROC_NUMBER=8
[2026-03-18 11:49:59] Set ATHENA_CORE_NUMBER=8
[2026-03-18 11:50:00] Starting ATLAS job with PandaID=7058640800
[2026-03-18 11:50:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 16:21:54]  *** The last 200 lines of the pilot log: ***
[2026-03-18 16:21:54] 2026-03-18 20:20:39,447 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 16:21:54] 2026-03-18 20:20:39,447 | INFO     | log transfer has been attempted: DONE
[2026-03-18 16:21:54] 2026-03-18 20:20:39,447 | INFO     | job 7058640800 has finished - writing final server update
[2026-03-18 16:21:54] 2026-03-18 20:20:39,447 | INFO     | total number of processed events: 400 (read)
[2026-03-18 16:21:54] 2026-03-18 20:20:39,459 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7058640800/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 16:21:54] 2026-03-18 20:20:39,460 | INFO     | extracted standard info from prmon json
[2026-03-18 16:21:54] 2026-03-18 20:20:39,460 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 16:21:54] 2026-03-18 20:20:39,460 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 16:21:54] 2026-03-18 20:20:39,460 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 16:21:54] 2026-03-18 20:20:39,460 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 16:21:54] 2026-03-18 20:20:39,462 | INFO     | fitting pss+swap vs Time
[2026-03-18 16:21:54] 2026-03-18 20:20:39,463 | INFO     | sum of square deviations: 5449929860.134642
[2026-03-18 16:21:54] 2026-03-18 20:20:39,464 | INFO     | sum of deviations: 127774480986.73077
[2026-03-18 16:21:54] 2026-03-18 20:20:39,464 | INFO     | mean x: 1773857316.5576923
[2026-03-18 16:21:54] 2026-03-18 20:20:39,464 | INFO     | mean y: 2453082.0846153847
[2026-03-18 16:21:54] 2026-03-18 20:20:39,464 | INFO     | intersect: -41585916637.24139
[2026-03-18 16:21:54] 2026-03-18 20:20:39,464 | INFO     | chi2: 6.2170043943235065
[2026-03-18 16:21:54] 2026-03-18 20:20:39,464 | INFO     | sum of square deviations: 5141487872.337213
[2026-03-18 16:21:54] 2026-03-18 20:20:39,465 | INFO     | sum of deviations: 141476786466.655
[2026-03-18 16:21:54] 2026-03-18 20:20:39,465 | INFO     | mean x: 1773857164.0509803
[2026-03-18 16:21:54] 2026-03-18 20:20:39,465 | INFO     | mean y: 2459731.180392157
[2026-03-18 16:21:54] 2026-03-18 20:20:39,465 | INFO     | intersect: -48808238154.742226
[2026-03-18 16:21:54] 2026-03-18 20:20:39,466 | INFO     | chi2: 5.569183147327524
[2026-03-18 16:21:54] 2026-03-18 20:20:39,466 | INFO     | current chi2=5.569183147327524 (change=10.420151023014903 %)
[2026-03-18 16:21:54] 2026-03-18 20:20:39,466 | INFO     | right removable region: 254
[2026-03-18 16:21:54] 2026-03-18 20:20:39,466 | INFO     | sum of square deviations: 5141510200.117676
[2026-03-18 16:21:54] 2026-03-18 20:20:39,467 | INFO     | sum of deviations: 36963884860.64705
[2026-03-18 16:21:54] 2026-03-18 20:20:39,467 | INFO     | mean x: 1773857469.0588236
[2026-03-18 16:21:54] 2026-03-18 20:20:39,467 | INFO     | mean y: 2497950.223529412
[2026-03-18 16:21:54] 2026-03-18 20:20:39,467 | INFO     | intersect: -12750304376.997068
[2026-03-18 16:21:54] 2026-03-18 20:20:39,467 | INFO     | chi2: 1.508802977389876
[2026-03-18 16:21:54] 2026-03-18 20:20:39,467 | INFO     | current chi2=1.508802977389876 (change=75.73102925956587 %)
[2026-03-18 16:21:54] 2026-03-18 20:20:39,467 | INFO     | sum of square deviations: 4844951227.600014
[2026-03-18 16:21:54] 2026-03-18 20:20:39,468 | INFO     | sum of deviations: 2761809311.5600033
[2026-03-18 16:21:54] 2026-03-18 20:20:39,468 | INFO     | mean x: 1773857621.56
[2026-03-18 16:21:54] 2026-03-18 20:20:39,469 | INFO     | mean y: 2515437.296
[2026-03-18 16:21:54] 2026-03-18 20:20:39,469 | INFO     | intersect: -1008651913.3055613
[2026-03-18 16:21:54] 2026-03-18 20:20:39,469 | INFO     | chi2: 0.720073020210152
[2026-03-18 16:21:54] 2026-03-18 20:20:39,469 | INFO     | current chi2=0.720073020210152 (change=52.27521213831191 %)
[2026-03-18 16:21:54] 2026-03-18 20:20:39,469 | INFO     | sum of square deviations: 4560020380.081631
[2026-03-18 16:21:54] 2026-03-18 20:20:39,470 | INFO     | sum of deviations: -905328470.6938782
[2026-03-18 16:21:54] 2026-03-18 20:20:39,470 | INFO     | mean x: 1773857774.0612245
[2026-03-18 16:21:54] 2026-03-18 20:20:39,470 | INFO     | mean y: 2517376.3795918366
[2026-03-18 16:21:54] 2026-03-18 20:20:39,470 | INFO     | intersect: 354692106.307125
[2026-03-18 16:21:54] 2026-03-18 20:20:39,470 | INFO     | chi2: 0.7036100725715883
[2026-03-18 16:21:54] 2026-03-18 20:20:39,470 | INFO     | current chi2=0.7036100725715883 (change=2.28628863691616 %)
[2026-03-18 16:21:54] 2026-03-18 20:20:39,470 | INFO     | left removable region: 30
[2026-03-18 16:21:54] 2026-03-18 20:20:39,470 | INFO     | sum of square deviations: 3485085743.6383963
[2026-03-18 16:21:54] 2026-03-18 20:20:39,471 | INFO     | sum of deviations: 9078850467.178574
[2026-03-18 16:21:54] 2026-03-18 20:20:39,471 | INFO     | mean x: 1773858048.5401785
[2026-03-18 16:21:54] 2026-03-18 20:20:39,471 | INFO     | mean y: 2528971.535714286
[2026-03-18 16:21:54] 2026-03-18 20:20:39,471 | INFO     | intersect: -4618474113.422658
[2026-03-18 16:21:54] 2026-03-18 20:20:39,471 | INFO     | chi2: 0.0017698166051874158
[2026-03-18 16:21:54] 2026-03-18 20:20:39,471 | INFO     | current memory leak: 2.61 B/s (using 224 data points, chi2=0.00)
[2026-03-18 16:21:54] 2026-03-18 20:20:39,472 | INFO     | could have reported an average CPU frequency of 3799 MHz (12 samples)
[2026-03-18 16:21:54] 2026-03-18 20:20:39,472 | INFO     | ..............................
[2026-03-18 16:21:54] 2026-03-18 20:20:39,472 | INFO     | . Timing measurements:
[2026-03-18 16:21:54] 2026-03-18 20:20:39,472 | INFO     | . get job = 0 s
[2026-03-18 16:21:54] 2026-03-18 20:20:39,472 | INFO     | . initial setup = 51 s
[2026-03-18 16:21:54] 2026-03-18 20:20:39,472 | INFO     | . payload setup = 193 s
[2026-03-18 16:21:54] 2026-03-18 20:20:39,472 | INFO     | . stage-in = 0 s
[2026-03-18 16:21:54] 2026-03-18 20:20:39,472 | INFO     | . payload execution = 15853 s
[2026-03-18 16:21:54] 2026-03-18 20:20:39,472 | INFO     | . stage-out = 5 s
[2026-03-18 16:21:54] 2026-03-18 20:20:39,472 | INFO     | . log creation = 1 s
[2026-03-18 16:21:54] 2026-03-18 20:20:39,472 | INFO     | ..............................
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | 
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | job summary report
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | --------------------------------------------------
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | PanDA job id: 7058640800
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | task id: 49176822
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | errors: (none)
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | pilot state: finished 
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | transexitcode: 0
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | exeerrorcode: 0
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | exeerrordiag: 
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | exitcode: 0
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | exitmsg: OK
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | cpuconsumptiontime: 58082 s
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | nevents: 400
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | neventsw: 0
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | pid: 697844
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | pgrp: 697844
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | corecount: 8
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | event service: False
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | sizes: {0: 2280048, 1: 2280136, 16051: 2311293, 16058: 2320291, 16060: 2320541}
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | --------------------------------------------------
[2026-03-18 16:21:54] 2026-03-18 20:20:39,520 | INFO     | 
[2026-03-18 16:21:54] 2026-03-18 20:20:39,521 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-03-18 16:21:54] 2026-03-18 20:20:39,593 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,593 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,593 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,593 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,593 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,593 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,594 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,594 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,594 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,594 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,594 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,594 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,594 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,594 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 16:21:54] 2026-03-18 20:20:39,594 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,594 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 16:21:54] 2026-03-18 20:20:39,594 | INFO     | job 7058640800 has completed (purged errors)
[2026-03-18 16:21:54] 2026-03-18 20:20:39,594 | INFO     | overall cleanup function is called
[2026-03-18 16:21:54] 2026-03-18 20:20:40,609 | INFO     | --- collectZombieJob: --- 10, [697844]
[2026-03-18 16:21:54] 2026-03-18 20:20:40,609 | INFO     | zombie collector waiting for pid 697844
[2026-03-18 16:21:54] 2026-03-18 20:20:40,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 16:21:54] 2026-03-18 20:20:40,609 | INFO     | collected zombie processes
[2026-03-18 16:21:54] 2026-03-18 20:20:40,609 | INFO     | will attempt to kill all subprocesses of pid=697844
[2026-03-18 16:21:54] 2026-03-18 20:20:43,681 | INFO     | process IDs to be killed: [697844] (in reverse order)
[2026-03-18 16:21:54] 2026-03-18 20:20:47,247 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 16:21:54] 2026-03-18 20:20:47,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 16:21:54] 2026-03-18 20:20:47,310 | INFO     | did not find any defunct processes belonging to 697844
[2026-03-18 16:21:54] 2026-03-18 20:20:47,461 | INFO     | did not find any defunct processes belonging to 697844
[2026-03-18 16:21:54] 2026-03-18 20:20:47,477 | INFO     | ready for new job
[2026-03-18 16:21:54] 2026-03-18 20:20:47,477 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 16:21:54] 2026-03-18 20:20:47,479 | INFO     | **************************************
[2026-03-18 16:21:54] 2026-03-18 20:20:47,479 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 16:21:54] 2026-03-18 20:20:47,479 | INFO     | **************************************
[2026-03-18 16:21:54] 2026-03-18 20:20:47,479 | INFO     | 
[2026-03-18 16:21:54] 2026-03-18 20:20:47,516 | INFO     | architecture information:
[2026-03-18 16:21:54] 2026-03-18 20:20:47,516 | INFO     | executing command: cat /etc/os-release
[2026-03-18 16:21:54] 2026-03-18 20:20:47,658 | INFO     | cat /etc/os-release:
[2026-03-18 16:21:54] NAME="CentOS Linux"
[2026-03-18 16:21:54] VERSION="7 (Core)"
[2026-03-18 16:21:54] ID="centos"
[2026-03-18 16:21:54] ID_LIKE="rhel fedora"
[2026-03-18 16:21:54] VERSION_ID="7"
[2026-03-18 16:21:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 16:21:54] ANSI_COLOR="0;31"
[2026-03-18 16:21:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 16:21:54] HOME_URL="https://www.centos.org/"
[2026-03-18 16:21:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 16:21:54] 
[2026-03-18 16:21:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 16:21:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 16:21:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 16:21:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 16:21:54] 
[2026-03-18 16:21:54] 2026-03-18 20:20:47,658 | INFO     | **************************************
[2026-03-18 16:21:54] 2026-03-18 20:20:48,161 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-03-18 16:21:54] 2026-03-18 20:20:48,211 | INFO     | sufficient remaining disk space (91384446976 B)
[2026-03-18 16:21:54] 2026-03-18 20:20:48,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 16:21:54] 2026-03-18 20:20:48,211 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 16:21:54] 2026-03-18 20:20:48,212 | INFO     | update_server=False
[2026-03-18 16:21:54] 2026-03-18 20:20:48,212 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 16:21:54] 2026-03-18 20:20:48,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 16:21:54] 2026-03-18 20:20:48,314 | INFO     | all job control threads have been joined
[2026-03-18 16:21:54] 2026-03-18 20:20:48,434 | INFO     | all data control threads have been joined
[2026-03-18 16:21:54] 2026-03-18 20:20:48,580 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 16:21:54] 2026-03-18 20:20:48,634 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 16:21:54] 2026-03-18 20:20:48,634 | INFO     | aborting loop
[2026-03-18 16:21:54] 2026-03-18 20:20:49,209 | INFO     | all payload control threads have been joined
[2026-03-18 16:21:54] 2026-03-18 20:20:49,222 | INFO     | [job] retrieve thread has finished
[2026-03-18 16:21:54] 2026-03-18 20:20:49,320 | INFO     | [job] control thread has finished
[2026-03-18 16:21:54] 2026-03-18 20:20:49,361 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 16:21:54] 2026-03-18 20:20:49,440 | INFO     | [data] control thread has finished
[2026-03-18 16:21:54] 2026-03-18 20:20:49,598 | INFO     | [job] queue monitor thread has finished
[2026-03-18 16:21:54] 2026-03-18 20:20:49,640 | INFO     | [job] job monitor thread has finished
[2026-03-18 16:21:54] 2026-03-18 20:20:49,787 | INFO     | [payload] validate_post thread has finished
[2026-03-18 16:21:54] 2026-03-18 20:20:49,875 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 16:21:54] 2026-03-18 20:20:50,045 | INFO     | [data] copytool_in thread has finished
[2026-03-18 16:21:54] 2026-03-18 20:20:50,045 | INFO     | [job] validate thread has finished
[2026-03-18 16:21:54] 2026-03-18 20:20:50,046 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 16:21:54] 2026-03-18 20:20:50,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 16:21:54] 2026-03-18 20:20:50,144 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 16:21:54] 2026-03-18 20:20:50,219 | INFO     | [payload] control thread has finished
[2026-03-18 16:21:54] 2026-03-18 20:20:50,219 | INFO     | [data] copytool_out thread has finished
[2026-03-18 16:21:54] 2026-03-18 20:20:50,340 | INFO     | [payload] failed_post thread has finished
[2026-03-18 16:21:54] 2026-03-18 20:20:54,063 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 16:21:54] 2026-03-18 20:21:15,039 | INFO     | PID=654319 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-18 16:21:54] 2026-03-18 20:21:15,083 | INFO     | .. there are 44 such processes running
[2026-03-18 16:21:54] 2026-03-18 20:21:15,084 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 16:21:54] 2026-03-18 20:21:15,084 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 16:21:54] 2026-03-18 20:21:15,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 16:21:54] 2026-03-18 20:21:26,623 | INFO     | [monitor] cgroup control has ended
[2026-03-18 16:21:54] 2026-03-18 20:21:26,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139622041761600)>', '<ExcThread(monitor, started 139621316941568)>']
[2026-03-18 16:21:54] 2026-03-18 20:21:27,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 16:21:54] 2026-03-18 20:21:27,169 | INFO     | [monitor] control thread has ended
[2026-03-18 16:21:54] 2026-03-18 20:21:31,968 | INFO     | all workflow threads have been joined
[2026-03-18 16:21:54] 2026-03-18 20:21:31,968 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 16:21:54] 2026-03-18 20:21:31,968 | INFO     | traces error code: 0
[2026-03-18 16:21:54] 2026-03-18 20:21:31,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 16:21:54] 2026-03-18 20:21:32,848 [wrapper] ==== pilot stdout END ====
[2026-03-18 16:21:54] 2026-03-18 20:21:32,870 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 16:21:54] 2026-03-18 20:21:32,891 [wrapper] pilotpid: 654319
[2026-03-18 16:21:54] 2026-03-18 20:21:32,930 [wrapper] Pilot exit status: 0
[2026-03-18 16:21:54] 2026-03-18 20:21:33,075 [wrapper] pandaids: 7058640800
[2026-03-18 16:21:54] 2026-03-18 20:21:34,117 [wrapper] cleanup supervisor_pilot   19735 654320
[2026-03-18 16:21:54] 2026-03-18 20:21:34,172 [wrapper] Test setup, not cleaning
[2026-03-18 16:21:54] 2026-03-18 20:21:34,198 [wrapper] apfmon messages muted
[2026-03-18 16:21:54] 2026-03-18 20:21:34,222 [wrapper] ==== wrapper stdout END ====
[2026-03-18 16:21:54] 2026-03-18 20:21:34,241 [wrapper] ==== wrapper stderr END ====
[2026-03-18 16:21:54]  *** Error codes and diagnostics ***
[2026-03-18 16:21:54]     "exeErrorCode": 0,
[2026-03-18 16:21:54]     "exeErrorDiag": "",
[2026-03-18 16:21:54]     "pilotErrorCode": 0,
[2026-03-18 16:21:54]     "pilotErrorDiag": "",
[2026-03-18 16:21:54]  *** Listing of results directory ***
[2026-03-18 16:21:54] total 486484
[2026-03-18 16:21:54] -rwx------. 1 boincer umatlas     36322 Mar 18 04:55 runpilot2-wrapper.sh
[2026-03-18 16:21:54] -rw-r--r--. 1 boincer umatlas      5111 Mar 18 04:55 queuedata.json
[2026-03-18 16:21:54] -rw-r--r--. 1 boincer umatlas    585013 Mar 18 04:55 pilot3.tar.gz
[2026-03-18 16:21:54] -rw-r--r--. 1 boincer umatlas       100 Mar 18 11:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 16:21:54] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 18 11:49 run_atlas
[2026-03-18 16:21:54] -rw-r--r--. 1 boincer umatlas       105 Mar 18 11:49 job.xml
[2026-03-18 16:21:54] -rw-r--r--. 2 boincer umatlas 243454162 Mar 18 11:49 EVNT.49135364._000019.pool.root.1
[2026-03-18 16:21:54] -rw-r--r--. 2 boincer umatlas     15845 Mar 18 11:49 start_atlas.sh
[2026-03-18 16:21:54] drwxrwx--x. 2 boincer umatlas      4096 Mar 18 11:49 shared
[2026-03-18 16:21:54] -rw-r--r--. 2 boincer umatlas    597531 Mar 18 11:49 input.tar.gz
[2026-03-18 16:21:54] -rw-r--r--. 1 boincer umatlas         0 Mar 18 11:49 boinc_lockfile
[2026-03-18 16:21:54] -rw-r--r--. 1 boincer umatlas      2580 Mar 18 11:49 pandaJob.out
[2026-03-18 16:21:54] -rw-------. 1 boincer umatlas        57 Mar 18 11:50 setup.sh.local
[2026-03-18 16:21:54] -rw-------. 1 boincer umatlas   1011286 Mar 18 11:52 agis_schedconf.cvmfs.json
[2026-03-18 16:21:54] -rw-------. 1 boincer umatlas       427 Mar 18 11:52 workernode_map.json
[2026-03-18 16:21:54] drwx------. 5 boincer umatlas      4096 Mar 18 11:52 pilot3
[2026-03-18 16:21:54] -rw-------. 1 boincer umatlas 245900451 Mar 18 16:19 HITS.49176822._000753.pool.root.1
[2026-03-18 16:21:54] -rw-r--r--. 1 boincer umatlas       531 Mar 18 16:19 boinc_task_state.xml
[2026-03-18 16:21:54] -rw-r--r--. 1 boincer umatlas      7170 Mar 18 16:20 init_data.xml
[2026-03-18 16:21:54] -rw-------. 1 boincer umatlas      1046 Mar 18 16:20 memory_monitor_summary.json
[2026-03-18 16:21:54] -rw-------. 1 boincer umatlas   1511579 Mar 18 16:20 agis_ddmendpoints.agis.ALL.json
[2026-03-18 16:21:54] -rw-------. 1 boincer umatlas    481433 Mar 18 16:20 log.49176822._000753.job.log.tgz.1
[2026-03-18 16:21:54] -rw-------. 1 boincer umatlas      6325 Mar 18 16:20 heartbeat.json
[2026-03-18 16:21:54] -rw-------. 1 boincer umatlas        95 Mar 18 16:21 pilot_heartbeat.json
[2026-03-18 16:21:54] -rw-------. 1 boincer umatlas      4819 Mar 18 16:21 pilotlog.txt
[2026-03-18 16:21:54] -rw-------. 1 boincer umatlas   1947325 Mar 18 16:21 log.49176822._000753.job.log.1
[2026-03-18 16:21:54] -rw-------. 1 boincer umatlas       357 Mar 18 16:21 output.list
[2026-03-18 16:21:54] -rw-r--r--. 1 boincer umatlas       620 Mar 18 16:21 runtime_log
[2026-03-18 16:21:54] -rw-------. 1 boincer umatlas   2447360 Mar 18 16:21 result.tar.gz
[2026-03-18 16:21:54] -rw-r--r--. 1 boincer umatlas      9332 Mar 18 16:21 runtime_log.err
[2026-03-18 16:21:54] -rw-------. 1 boincer umatlas       653 Mar 18 16:21 8llKDmUr1M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmIryLDmKhl3Cn.diag
[2026-03-18 16:21:54] -rw-r--r--. 1 boincer umatlas        28 Mar 18 16:21 wrapper_checkpoint.txt
[2026-03-18 16:21:54] -rw-r--r--. 1 boincer umatlas      8192 Mar 18 16:21 boinc_mmap_file
[2026-03-18 16:21:54] -rw-r--r--. 1 boincer umatlas     21094 Mar 18 16:21 stderr.txt
[2026-03-18 16:21:54] HITS file was successfully produced:
[2026-03-18 16:21:54] -rw-------. 1 boincer umatlas 245900451 Mar 18 16:19 shared/HITS.pool.root.1
[2026-03-18 16:21:54]  *** Contents of shared directory: ***
[2026-03-18 16:21:54] total 480888
[2026-03-18 16:21:54] -rw-r--r--. 2 boincer umatlas 243454162 Mar 18 11:49 ATLAS.root_0
[2026-03-18 16:21:54] -rw-r--r--. 2 boincer umatlas     15845 Mar 18 11:49 start_atlas.sh
[2026-03-18 16:21:54] -rw-r--r--. 2 boincer umatlas    597531 Mar 18 11:49 input.tar.gz
[2026-03-18 16:21:54] -rw-------. 1 boincer umatlas 245900451 Mar 18 16:19 HITS.pool.root.1
[2026-03-18 16:21:54] -rw-------. 1 boincer umatlas   2447360 Mar 18 16:21 result.tar.gz
16:21:56 (602712): run_atlas exited; CPU time 58773.403688
16:21:56 (602712): called boinc_finish(0)

</stderr_txt>
]]>

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