Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:45:41 (14435): wrapper (7.7.26015): starting
17:45:41 (14435): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 17:45:41] Arguments: --nthreads 8
[2026-03-18 17:45:41] Threads: 8
[2026-03-18 17:45:41] Checking for CVMFS
[2026-03-18 17:45:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 17:45:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 17:45:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 17:45:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 17:45:41] 2.11.0.0 4333 150243 104420 157424 2 188 3849739 4096001 5502 130560 4 15566038 99.705 8562991 339 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-18 17:45:41] CVMFS is ok
[2026-03-18 17:45:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 17:45:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 17:45:41] Further information can be found at the LHC@home message board.
[2026-03-18 17:45:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 17:45:41] Checking for apptainer binary...
[2026-03-18 17:45:41] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-18 17:45:41] apptainer is not installed, using version from CVMFS
[2026-03-18 17:45:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 17:45:41] WARNING: Environment variable TMPDIR already has value [/tmp/job_11340161/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node176
[2026-03-18 17:45:41] apptainer works
[2026-03-18 17:45:41] Set ATHENA_PROC_NUMBER=8
[2026-03-18 17:45:41] Set ATHENA_CORE_NUMBER=8
[2026-03-18 17:45:41] Starting ATLAS job with PandaID=7058195855
[2026-03-18 17:45:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11340161/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 18:53:02]  *** The last 200 lines of the pilot log: ***
[2026-03-18 18:53:02]  is_altstaged=None
[2026-03-18 18:53:02]  is_tar=False
[2026-03-18 18:53:02]  lfn=log.49191904._000009.job.log.tgz.1
[2026-03-18 18:53:02]  mtime=0
[2026-03-18 18:53:02]  protocol_id=None
[2026-03-18 18:53:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-18 18:53:02]  replicas=None
[2026-03-18 18:53:02]  scope=mc23_13p6TeV
[2026-03-18 18:53:02]  status=None
[2026-03-18 18:53:02]  status_code=0
[2026-03-18 18:53:02]  storage_token=
[2026-03-18 18:53:02]  surl=/tmp/job_11340161/atlas/pilot/slots/0/PanDA_Pilot-7058195855/log.49191904._000009.job.log.tgz.1
[2026-03-18 18:53:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/4f/log.49191904._000009.job.log.tgz.1
[2026-03-18 18:53:02]  workdir=None
[2026-03-18 18:53:02] ]
[2026-03-18 18:53:02] 2026-03-18 17:52:21,385 | INFO     | transferring file log.49191904._000009.job.log.tgz.1 from /tmp/job_11340161/atlas/pilot/slots/0/PanDA_Pilot-7058195855/log.49191904._000009.job.log.tgz.1 to /tmp/j
[2026-03-18 18:53:02] 2026-03-18 17:52:21,385 | INFO     | executing command: /usr/bin/env mv /tmp/job_11340161/atlas/pilot/slots/0/PanDA_Pilot-7058195855/log.49191904._000009.job.log.tgz.1 /tmp/job_11340161/atlas/pilot/sl
[2026-03-18 18:53:02] 2026-03-18 17:52:21,394 | INFO     | adding to output.list: log.49191904._000009.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/4f/log.49191904._000009.job.log.tg
[2026-03-18 18:53:02] 2026-03-18 17:52:21,394 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-18 18:53:02] 2026-03-18 17:52:21,394 | INFO     | summary of transferred files:
[2026-03-18 18:53:02] 2026-03-18 17:52:21,394 | INFO     |  -- lfn=log.49191904._000009.job.log.tgz.1, status_code=0, status=transferred
[2026-03-18 18:53:02] 2026-03-18 17:52:21,394 | INFO     | stage-out finished correctly
[2026-03-18 18:53:02] 2026-03-18 17:52:22,234 | INFO     | monitor loop #302: job 0:7058195855 is in state 'finished'
[2026-03-18 18:53:02] 2026-03-18 17:52:22,234 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-18 18:53:02] 2026-03-18 17:52:22,312 | INFO     | PID=20217 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 18:53:02] 2026-03-18 17:52:22,313 | INFO     | .. there are 4 such processes running
[2026-03-18 18:53:02] 2026-03-18 17:52:23,313 | INFO     | time since job start (3995s) is within the limit (345600.0s)
[2026-03-18 18:53:02] 2026-03-18 17:52:24,694 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-18 18:53:02] 2026-03-18 17:52:24,741 | INFO     | monitor loop #303: job 0:7058195855 is in state 'finished'
[2026-03-18 18:53:02] 2026-03-18 17:52:24,741 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-18 18:53:02] 2026-03-18 17:52:24,857 | INFO     | job 7058195855 has state=finished
[2026-03-18 18:53:02] 2026-03-18 17:52:24,858 | INFO     | preparing for final server update for job 7058195855 in state='finished'
[2026-03-18 18:53:02] 2026-03-18 17:52:24,858 | INFO     | reading metadata from: /tmp/job_11340161/atlas/pilot/slots/0/PanDA_Pilot-7058195855/jobReport.json
[2026-03-18 18:53:02] 2026-03-18 17:52:24,859 | INFO     | added worker_node to metadata from /tmp/job_11340161/atlas/pilot/slots/0/workernode_map.json
[2026-03-18 18:53:02] 2026-03-18 17:52:24,859 | INFO     | this job has now completed (state=finished)
[2026-03-18 18:53:02] 2026-03-18 17:52:24,859 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 18:53:02] 2026-03-18 17:52:24,859 | INFO     | log transfer has been attempted: DONE
[2026-03-18 18:53:02] 2026-03-18 17:52:24,859 | INFO     | job 7058195855 has finished - writing final server update
[2026-03-18 18:53:02] 2026-03-18 17:52:24,859 | INFO     | total number of processed events: 400 (read)
[2026-03-18 18:53:02] 2026-03-18 17:52:24,877 | INFO     | using path: /tmp/job_11340161/atlas/pilot/slots/0/PanDA_Pilot-7058195855/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 18:53:02] 2026-03-18 17:52:24,877 | INFO     | extracted standard info from prmon json
[2026-03-18 18:53:02] 2026-03-18 17:52:24,877 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 18:53:02] 2026-03-18 17:52:24,878 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 18:53:02] 2026-03-18 17:52:24,878 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 18:53:02] 2026-03-18 17:52:24,878 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 18:53:02] 2026-03-18 17:52:24,878 | INFO     | fitting pss+swap vs Time
[2026-03-18 18:53:02] 2026-03-18 17:52:24,878 | INFO     | sum of square deviations: 63666310.0
[2026-03-18 18:53:02] 2026-03-18 17:52:24,879 | INFO     | sum of deviations: -1825614588.0
[2026-03-18 18:53:02] 2026-03-18 17:52:24,879 | INFO     | mean x: 1773854440.0
[2026-03-18 18:53:02] 2026-03-18 17:52:24,879 | INFO     | mean y: 2564363.0677966103
[2026-03-18 18:53:02] 2026-03-18 17:52:24,879 | INFO     | intersect: 50867370924.85174
[2026-03-18 18:53:02] 2026-03-18 17:52:24,879 | INFO     | chi2: 0.006574894972550456
[2026-03-18 18:53:02] 2026-03-18 17:52:24,879 | INFO     | current memory leak: -28.67 B/s (using 59 data points, chi2=0.01)
[2026-03-18 18:53:02] 2026-03-18 17:52:24,879 | INFO     | could have reported an average CPU frequency of 3083 MHz (6 samples)
[2026-03-18 18:53:02] 2026-03-18 17:52:24,879 | INFO     | ..............................
[2026-03-18 18:53:02] 2026-03-18 17:52:24,879 | INFO     | . Timing measurements:
[2026-03-18 18:53:02] 2026-03-18 17:52:24,879 | INFO     | . get job = 0 s
[2026-03-18 18:53:02] 2026-03-18 17:52:24,879 | INFO     | . initial setup = 2 s
[2026-03-18 18:53:02] 2026-03-18 17:52:24,879 | INFO     | . payload setup = 3 s
[2026-03-18 18:53:02] 2026-03-18 17:52:24,879 | INFO     | . stage-in = 0 s
[2026-03-18 18:53:02] 2026-03-18 17:52:24,879 | INFO     | . payload execution = 3972 s
[2026-03-18 18:53:02] 2026-03-18 17:52:24,879 | INFO     | . stage-out = 0 s
[2026-03-18 18:53:02] 2026-03-18 17:52:24,879 | INFO     | . log creation = 0 s
[2026-03-18 18:53:02] 2026-03-18 17:52:24,879 | INFO     | ..............................
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | 
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | job summary report
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | --------------------------------------------------
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | PanDA job id: 7058195855
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | task id: 49191904
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | errors: (none)
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | pilot state: finished 
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | transexitcode: 0
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | exeerrorcode: 0
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | exeerrordiag: 
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | exitcode: 0
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | exitmsg: OK
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | cpuconsumptiontime: 29548 s
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | nevents: 400
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | neventsw: 0
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | pid: 31384
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | pgrp: 31384
[2026-03-18 18:53:02] 2026-03-18 17:52:24,926 | INFO     | corecount: 8
[2026-03-18 18:53:02] 2026-03-18 17:52:24,927 | INFO     | event service: False
[2026-03-18 18:53:02] 2026-03-18 17:52:24,927 | INFO     | sizes: {0: 2279850, 1: 2280422, 11: 2280422, 3980: 2306437, 3981: 2306436, 3982: 2315520, 3985: 2315898}
[2026-03-18 18:53:02] 2026-03-18 17:52:24,927 | INFO     | --------------------------------------------------
[2026-03-18 18:53:02] 2026-03-18 17:52:24,927 | INFO     | 
[2026-03-18 18:53:02] 2026-03-18 17:52:24,927 | INFO     | executing command: ls -lF /tmp/job_11340161/atlas/pilot/slots/0
[2026-03-18 18:53:02] 2026-03-18 17:52:24,936 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,936 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | job 7058195855 has completed (purged errors)
[2026-03-18 18:53:02] 2026-03-18 17:52:24,937 | INFO     | overall cleanup function is called
[2026-03-18 18:53:02] 2026-03-18 17:52:25,943 | INFO     | --- collectZombieJob: --- 10, [31384]
[2026-03-18 18:53:02] 2026-03-18 17:52:25,943 | INFO     | zombie collector waiting for pid 31384
[2026-03-18 18:53:02] 2026-03-18 17:52:25,943 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 18:53:02] 2026-03-18 17:52:25,943 | INFO     | collected zombie processes
[2026-03-18 18:53:02] 2026-03-18 17:52:25,943 | INFO     | will attempt to kill all subprocesses of pid=31384
[2026-03-18 18:53:02] 2026-03-18 17:52:26,046 | INFO     | process IDs to be killed: [31384] (in reverse order)
[2026-03-18 18:53:02] 2026-03-18 17:52:26,084 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 18:53:02] 2026-03-18 17:52:26,084 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 18:53:02] 2026-03-18 17:52:26,088 | INFO     | did not find any defunct processes belonging to 31384
[2026-03-18 18:53:02] 2026-03-18 17:52:26,091 | INFO     | did not find any defunct processes belonging to 31384
[2026-03-18 18:53:02] 2026-03-18 17:52:26,091 | INFO     | ready for new job
[2026-03-18 18:53:02] 2026-03-18 17:52:26,091 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 18:53:02] 2026-03-18 17:52:26,092 | INFO     | **************************************
[2026-03-18 18:53:02] 2026-03-18 17:52:26,092 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 18:53:02] 2026-03-18 17:52:26,092 | INFO     | **************************************
[2026-03-18 18:53:02] 2026-03-18 17:52:26,092 | INFO     | 
[2026-03-18 18:53:02] 2026-03-18 17:52:26,106 | INFO     | architecture information:
[2026-03-18 18:53:02] 2026-03-18 17:52:26,106 | INFO     | executing command: cat /etc/os-release
[2026-03-18 18:53:02] 2026-03-18 17:52:26,112 | INFO     | cat /etc/os-release:
[2026-03-18 18:53:02] NAME="CentOS Linux"
[2026-03-18 18:53:02] VERSION="7 (Core)"
[2026-03-18 18:53:02] ID="centos"
[2026-03-18 18:53:02] ID_LIKE="rhel fedora"
[2026-03-18 18:53:02] VERSION_ID="7"
[2026-03-18 18:53:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 18:53:02] ANSI_COLOR="0;31"
[2026-03-18 18:53:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 18:53:02] HOME_URL="https://www.centos.org/"
[2026-03-18 18:53:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 18:53:02] 
[2026-03-18 18:53:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 18:53:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 18:53:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 18:53:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 18:53:02] 
[2026-03-18 18:53:02] 2026-03-18 17:52:26,112 | INFO     | **************************************
[2026-03-18 18:53:02] 2026-03-18 17:52:26,615 | INFO     | executing command: df -mP /tmp/job_11340161/atlas/pilot/slots/0
[2026-03-18 18:53:02] 2026-03-18 17:52:26,622 | INFO     | sufficient remaining disk space (223774507008 B)
[2026-03-18 18:53:02] 2026-03-18 17:52:26,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 18:53:02] 2026-03-18 17:52:26,622 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 18:53:02] 2026-03-18 17:52:26,622 | INFO     | update_server=False
[2026-03-18 18:53:02] 2026-03-18 17:52:26,622 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 18:53:02] 2026-03-18 17:52:26,622 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 18:53:02] 2026-03-18 17:52:26,622 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 18:53:02] 2026-03-18 17:52:26,622 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 18:53:02] 2026-03-18 17:52:26,622 | INFO     | aborting loop
[2026-03-18 18:53:02] 2026-03-18 17:52:26,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 18:53:02] 2026-03-18 17:52:27,221 | INFO     | all data control threads have been joined
[2026-03-18 18:53:02] 2026-03-18 17:52:27,627 | INFO     | [job] retrieve thread has finished
[2026-03-18 18:53:02] 2026-03-18 17:52:27,627 | INFO     | [job] queue monitor thread has finished
[2026-03-18 18:53:02] 2026-03-18 17:52:27,628 | INFO     | [job] job monitor thread has finished
[2026-03-18 18:53:02] 2026-03-18 17:52:27,695 | INFO     | all payload control threads have been joined
[2026-03-18 18:53:02] 2026-03-18 17:52:28,059 | INFO     | all job control threads have been joined
[2026-03-18 18:53:02] 2026-03-18 17:52:28,084 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 18:53:02] 2026-03-18 17:52:28,226 | INFO     | [data] control thread has finished
[2026-03-18 18:53:02] 2026-03-18 17:52:28,546 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 18:53:02] 2026-03-18 17:52:28,656 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 18:53:02] 2026-03-18 17:52:28,656 | INFO     | [job] validate thread has finished
[2026-03-18 18:53:02] 2026-03-18 17:52:28,698 | INFO     | [payload] control thread has finished
[2026-03-18 18:53:02] 2026-03-18 17:52:28,803 | INFO     | [payload] failed_post thread has finished
[2026-03-18 18:53:02] 2026-03-18 17:52:28,830 | INFO     | [data] copytool_in thread has finished
[2026-03-18 18:53:02] 2026-03-18 17:52:28,957 | INFO     | [data] copytool_out thread has finished
[2026-03-18 18:53:02] 2026-03-18 17:52:29,065 | INFO     | [job] control thread has finished
[2026-03-18 18:53:02] 2026-03-18 17:52:29,228 | INFO     | [payload] validate_post thread has finished
[2026-03-18 18:53:02] 2026-03-18 17:52:30,628 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 18:53:02] 2026-03-18 17:52:36,935 | INFO     | job.realtimelogging is not enabled
[2026-03-18 18:53:02] 2026-03-18 17:52:37,940 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 18:53:02] 2026-03-18 17:52:54,938 | INFO     | [monitor] cgroup control has ended
[2026-03-18 18:53:02] 2026-03-18 17:52:56,505 | INFO     | PID=20217 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 18:53:02] 2026-03-18 17:52:56,505 | INFO     | .. there are 4 such processes running
[2026-03-18 18:53:02] 2026-03-18 17:52:56,505 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 18:53:02] 2026-03-18 17:52:56,505 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 18:53:02] 2026-03-18 17:52:56,505 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 18:53:02] 2026-03-18 17:52:56,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-03-18 18:53:02] 2026-03-18 17:52:57,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 18:53:02] 2026-03-18 17:52:57,510 | INFO     | [monitor] control thread has ended
[2026-03-18 18:53:02] 2026-03-18 17:53:01,848 | INFO     | all workflow threads have been joined
[2026-03-18 18:53:02] 2026-03-18 17:53:01,848 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 18:53:02] 2026-03-18 17:53:01,848 | INFO     | traces error code: 0
[2026-03-18 18:53:02] 2026-03-18 17:53:01,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 18:53:02] 2026-03-18 17:53:01,899 [wrapper] ==== pilot stdout END ====
[2026-03-18 18:53:02] 2026-03-18 17:53:01,900 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 18:53:02] 2026-03-18 17:53:01,901 [wrapper] pilotpid: 20217
[2026-03-18 18:53:02] 2026-03-18 17:53:01,902 [wrapper] Pilot exit status: 0
[2026-03-18 18:53:02] 2026-03-18 17:53:01,907 [wrapper] pandaids: 7058195855
[2026-03-18 18:53:02] 2026-03-18 17:53:01,931 [wrapper] cleanup supervisor_pilot 22117 20218
[2026-03-18 18:53:02] 2026-03-18 17:53:01,932 [wrapper] Test setup, not cleaning
[2026-03-18 18:53:02] 2026-03-18 17:53:01,933 [wrapper] apfmon messages muted
[2026-03-18 18:53:02] 2026-03-18 17:53:01,934 [wrapper] ==== wrapper stdout END ====
[2026-03-18 18:53:02] 2026-03-18 17:53:01,935 [wrapper] ==== wrapper stderr END ====
[2026-03-18 18:53:02]  *** Error codes and diagnostics ***
[2026-03-18 18:53:02]     "exeErrorCode": 0,
[2026-03-18 18:53:02]     "exeErrorDiag": "",
[2026-03-18 18:53:02]     "pilotErrorCode": 0,
[2026-03-18 18:53:02]     "pilotErrorDiag": "",
[2026-03-18 18:53:02]  *** Listing of results directory ***
[2026-03-18 18:53:02] total 448872
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user    585013 Mar 18 05:11 pilot3.tar.gz
[2026-03-18 18:53:02] -rwx------ 1 mf493845 unix-user     36322 Mar 18 05:12 runpilot2-wrapper.sh
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user      5111 Mar 18 05:14 queuedata.json
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user       100 Mar 18 16:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 18:53:02] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 18 16:41 run_atlas
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user       105 Mar 18 16:41 job.xml
[2026-03-18 18:53:02] -rw-r--r-- 2 mf493845 unix-user 250589077 Mar 18 17:45 EVNT.49129126._000001.pool.root.1
[2026-03-18 18:53:02] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 18 17:45 start_atlas.sh
[2026-03-18 18:53:02] drwxrwx--x 2 mf493845 unix-user       100 Mar 18 17:45 shared
[2026-03-18 18:53:02] -rw-r--r-- 2 mf493845 unix-user    597524 Mar 18 17:45 input.tar.gz
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user      6390 Mar 18 17:45 init_data.xml
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user         0 Mar 18 17:45 boinc_setup_complete
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user      8192 Mar 18 17:45 boinc_mmap_file
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user         0 Mar 18 17:45 boinc_lockfile
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user      2594 Mar 18 17:45 pandaJob.out
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user   1011280 Mar 18 17:45 agis_schedconf.cvmfs.json
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user   1511579 Mar 18 17:45 agis_ddmendpoints.agis.ALL.json
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user       420 Mar 18 17:45 workernode_map.json
[2026-03-18 18:53:02] drwx------ 5 mf493845 unix-user       440 Mar 18 17:45 pilot3
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user 203300773 Mar 18 18:51 HITS.49191904._000009.pool.root.1
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user      1020 Mar 18 18:52 memory_monitor_summary.json
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user    310005 Mar 18 18:52 log.49191904._000009.job.log.tgz.1
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user      6303 Mar 18 18:52 heartbeat.json
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user        95 Mar 18 18:52 pilot_heartbeat.json
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user      4903 Mar 18 18:53 pilotlog.txt
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user    613860 Mar 18 18:53 log.49191904._000009.job.log.1
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user       357 Mar 18 18:53 output.list
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user       620 Mar 18 18:53 runtime_log
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user    942080 Mar 18 18:53 result.tar.gz
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user      9219 Mar 18 18:53 runtime_log.err
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user       642 Mar 18 18:53 GNDNDm8RxM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm5iyLDmUafNmm.diag
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user     22065 Mar 18 18:53 stderr.txt
[2026-03-18 18:53:02] HITS file was successfully produced:
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user 203300773 Mar 18 18:51 shared/HITS.pool.root.1
[2026-03-18 18:53:02]  *** Contents of shared directory: ***
[2026-03-18 18:53:02] total 444772
[2026-03-18 18:53:02] -rw-r--r-- 2 mf493845 unix-user 250589077 Mar 18 17:45 ATLAS.root_0
[2026-03-18 18:53:02] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 18 17:45 start_atlas.sh
[2026-03-18 18:53:02] -rw-r--r-- 2 mf493845 unix-user    597524 Mar 18 17:45 input.tar.gz
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user 203300773 Mar 18 18:51 HITS.pool.root.1
[2026-03-18 18:53:02] -rw------- 1 mf493845 unix-user    942080 Mar 18 18:53 result.tar.gz
18:53:03 (14435): run_atlas exited; CPU time 29604.452052
18:53:03 (14435): called boinc_finish(0)

</stderr_txt>
]]>

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