Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:00:22 (12233): wrapper (7.7.26015): starting
20:00:22 (12233): wrapper: running run_atlas (--nthreads 12)
[2026-03-18 20:00:22] Arguments: --nthreads 12
[2026-03-18 20:00:22] Threads: 12
[2026-03-18 20:00:22] Checking for CVMFS
[2026-03-18 20:00:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 20:00:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 20:00:23] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 20:00:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 20:00:23] 2.11.2.0 2925 449654 100316 157434 3 50 10856946 20275201 1 130560 1 195092840 99.954 25695695 17425 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-18 20:00:23] CVMFS is ok
[2026-03-18 20:00:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 20:00:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 20:00:23] Further information can be found at the LHC@home message board.
[2026-03-18 20:00:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 20:00:23] Checking for apptainer binary...
[2026-03-18 20:00:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 20:00:23] Running /usr/bin/apptainer --version
[2026-03-18 20:00:23] apptainer version 1.3.2-1.el7
[2026-03-18 20:00:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 20:00:25] c-205-9.aglt2.org
[2026-03-18 20:00:25] apptainer works
[2026-03-18 20:00:25] Set ATHENA_PROC_NUMBER=12
[2026-03-18 20:00:25] Set ATHENA_CORE_NUMBER=12
[2026-03-18 20:00:25] Starting ATLAS job with PandaID=7057257821
[2026-03-18 20:00:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 21:29:02]  *** The last 200 lines of the pilot log: ***
[2026-03-18 21:29:02]  is_altstaged=None
[2026-03-18 21:29:02]  is_tar=False
[2026-03-18 21:29:02]  lfn=log.48967085._025246.job.log.tgz.1
[2026-03-18 21:29:02]  mtime=0
[2026-03-18 21:29:02]  protocol_id=None
[2026-03-18 21:29:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-18 21:29:02]  replicas=None
[2026-03-18 21:29:02]  scope=mc23_13p6TeV
[2026-03-18 21:29:02]  status=None
[2026-03-18 21:29:02]  status_code=0
[2026-03-18 21:29:02]  storage_token=
[2026-03-18 21:29:02]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7057257821/log.48967085._025246.job.log.tgz.1
[2026-03-18 21:29:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/4b/log.48967085._025246.job.log.tgz.1
[2026-03-18 21:29:02]  workdir=None
[2026-03-18 21:29:02] ]
[2026-03-18 21:29:02] 2026-03-19 01:28:03,478 | INFO     | transferring file log.48967085._025246.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7057257821/log.48967085._025246.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-18 21:29:02] 2026-03-19 01:28:03,478 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7057257821/log.48967085._025246.job.log.tgz.1 /tmp/boinchome/slots/0/log.48967085._025246.job
[2026-03-18 21:29:02] 2026-03-19 01:28:03,499 | INFO     | adding to output.list: log.48967085._025246.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/4b/log.48967085._025246.job.log.tg
[2026-03-18 21:29:02] 2026-03-19 01:28:03,500 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-18 21:29:02] 2026-03-19 01:28:03,500 | INFO     | summary of transferred files:
[2026-03-18 21:29:02] 2026-03-19 01:28:03,500 | INFO     |  -- lfn=log.48967085._025246.job.log.tgz.1, status_code=0, status=transferred
[2026-03-18 21:29:02] 2026-03-19 01:28:03,500 | INFO     | stage-out finished correctly
[2026-03-18 21:29:02] 2026-03-19 01:28:04,323 | INFO     | time since job start (5237s) is within the limit (345600.0s)
[2026-03-18 21:29:02] 2026-03-19 01:28:06,099 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-18 21:29:02] 2026-03-19 01:28:06,327 | INFO     | time since job start (5239s) is within the limit (345600.0s)
[2026-03-18 21:29:02] 2026-03-19 01:28:07,609 | WARNING  | process 20836 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 21:29:02] 2026-03-19 01:28:07,610 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7057257821/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 21:29:02] 2026-03-19 01:28:07,693 | INFO     | number of running child processes to parent process 20836: 1
[2026-03-18 21:29:02] 2026-03-19 01:28:07,694 | INFO     | maximum number of monitored processes: 6
[2026-03-18 21:29:02] 2026-03-19 01:28:08,333 | INFO     | time since job start (5241s) is within the limit (345600.0s)
[2026-03-18 21:29:02] 2026-03-19 01:28:08,374 | INFO     | job 7057257821 has state=finished
[2026-03-18 21:29:02] 2026-03-19 01:28:08,374 | INFO     | preparing for final server update for job 7057257821 in state='finished'
[2026-03-18 21:29:02] 2026-03-19 01:28:08,443 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-18 21:29:02] 2026-03-19 01:28:08,443 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7057257821/jobReport.json
[2026-03-18 21:29:02] 2026-03-19 01:28:08,446 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-18 21:29:02] 2026-03-19 01:28:08,447 | INFO     | this job has now completed (state=finished)
[2026-03-18 21:29:02] 2026-03-19 01:28:08,447 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 21:29:02] 2026-03-19 01:28:08,447 | INFO     | log transfer has been attempted: DONE
[2026-03-18 21:29:02] 2026-03-19 01:28:08,447 | INFO     | job 7057257821 has finished - writing final server update
[2026-03-18 21:29:02] 2026-03-19 01:28:08,447 | INFO     | total number of processed events: 400 (read)
[2026-03-18 21:29:02] 2026-03-19 01:28:08,449 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7057257821/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 21:29:02] 2026-03-19 01:28:08,450 | INFO     | extracted standard info from prmon json
[2026-03-18 21:29:02] 2026-03-19 01:28:08,450 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 21:29:02] 2026-03-19 01:28:08,450 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 21:29:02] 2026-03-19 01:28:08,450 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 21:29:02] 2026-03-19 01:28:08,450 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 21:29:02] 2026-03-19 01:28:08,452 | INFO     | fitting pss+swap vs Time
[2026-03-18 21:29:02] 2026-03-19 01:28:08,452 | INFO     | sum of square deviations: 152858680.0
[2026-03-18 21:29:02] 2026-03-19 01:28:08,452 | INFO     | sum of deviations: -3011444096.0
[2026-03-18 21:29:02] 2026-03-19 01:28:08,453 | INFO     | mean x: 1773881163.0
[2026-03-18 21:29:02] 2026-03-19 01:28:08,453 | INFO     | mean y: 2696548.1139240507
[2026-03-18 21:29:02] 2026-03-19 01:28:08,453 | INFO     | intersect: 34949642022.992836
[2026-03-18 21:29:02] 2026-03-19 01:28:08,453 | INFO     | chi2: 0.0655427996909138
[2026-03-18 21:29:02] 2026-03-19 01:28:08,453 | INFO     | current memory leak: -19.70 B/s (using 79 data points, chi2=0.07)
[2026-03-18 21:29:02] 2026-03-19 01:28:08,453 | INFO     | could have reported an average CPU frequency of 1762 MHz (6 samples)
[2026-03-18 21:29:02] 2026-03-19 01:28:08,454 | INFO     | ..............................
[2026-03-18 21:29:02] 2026-03-19 01:28:08,454 | INFO     | . Timing measurements:
[2026-03-18 21:29:02] 2026-03-19 01:28:08,454 | INFO     | . get job = 0 s
[2026-03-18 21:29:02] 2026-03-19 01:28:08,454 | INFO     | . initial setup = 7 s
[2026-03-18 21:29:02] 2026-03-19 01:28:08,454 | INFO     | . payload setup = 14 s
[2026-03-18 21:29:02] 2026-03-19 01:28:08,454 | INFO     | . stage-in = 0 s
[2026-03-18 21:29:02] 2026-03-19 01:28:08,454 | INFO     | . payload execution = 5205 s
[2026-03-18 21:29:02] 2026-03-19 01:28:08,454 | INFO     | . stage-out = 0 s
[2026-03-18 21:29:02] 2026-03-19 01:28:08,454 | INFO     | . log creation = 0 s
[2026-03-18 21:29:02] 2026-03-19 01:28:08,454 | INFO     | ..............................
[2026-03-18 21:29:02] 2026-03-19 01:28:08,745 | INFO     | 
[2026-03-18 21:29:02] 2026-03-19 01:28:08,745 | INFO     | job summary report
[2026-03-18 21:29:02] 2026-03-19 01:28:08,745 | INFO     | --------------------------------------------------
[2026-03-18 21:29:02] 2026-03-19 01:28:08,745 | INFO     | PanDA job id: 7057257821
[2026-03-18 21:29:02] 2026-03-19 01:28:08,746 | INFO     | task id: 48967085
[2026-03-18 21:29:02] 2026-03-19 01:28:08,746 | INFO     | errors: (none)
[2026-03-18 21:29:02] 2026-03-19 01:28:08,746 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 21:29:02] 2026-03-19 01:28:08,746 | INFO     | pilot state: finished 
[2026-03-18 21:29:02] 2026-03-19 01:28:08,746 | INFO     | transexitcode: 0
[2026-03-18 21:29:02] 2026-03-19 01:28:08,746 | INFO     | exeerrorcode: 0
[2026-03-18 21:29:02] 2026-03-19 01:28:08,747 | INFO     | exeerrordiag: 
[2026-03-18 21:29:02] 2026-03-19 01:28:08,747 | INFO     | exitcode: 0
[2026-03-18 21:29:02] 2026-03-19 01:28:08,747 | INFO     | exitmsg: OK
[2026-03-18 21:29:02] 2026-03-19 01:28:08,747 | INFO     | cpuconsumptiontime: 55565 s
[2026-03-18 21:29:02] 2026-03-19 01:28:08,747 | INFO     | nevents: 400
[2026-03-18 21:29:02] 2026-03-19 01:28:08,747 | INFO     | neventsw: 0
[2026-03-18 21:29:02] 2026-03-19 01:28:08,748 | INFO     | pid: 20836
[2026-03-18 21:29:02] 2026-03-19 01:28:08,748 | INFO     | pgrp: 20836
[2026-03-18 21:29:02] 2026-03-19 01:28:08,748 | INFO     | corecount: 12
[2026-03-18 21:29:02] 2026-03-19 01:28:08,748 | INFO     | event service: False
[2026-03-18 21:29:02] 2026-03-19 01:28:08,748 | INFO     | sizes: {0: 2279753, 1: 2280157, 11: 2280157, 5223: 2306689, 5225: 2315687, 5227: 2315743, 5230: 2316065}
[2026-03-18 21:29:02] 2026-03-19 01:28:08,748 | INFO     | --------------------------------------------------
[2026-03-18 21:29:02] 2026-03-19 01:28:08,749 | INFO     | 
[2026-03-18 21:29:02] 2026-03-19 01:28:08,749 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-18 21:29:02] 2026-03-19 01:28:08,784 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,784 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,784 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,785 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,785 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,785 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,785 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,785 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,786 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,787 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,787 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,787 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 21:29:02] 2026-03-19 01:28:08,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,787 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 21:29:02] 2026-03-19 01:28:08,788 | INFO     | job 7057257821 has completed (purged errors)
[2026-03-18 21:29:02] 2026-03-19 01:28:08,788 | INFO     | overall cleanup function is called
[2026-03-18 21:29:02] 2026-03-19 01:28:09,447 | INFO     | PID=16237 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 21:29:02] 2026-03-19 01:28:09,796 | INFO     | --- collectZombieJob: --- 10, [20836]
[2026-03-18 21:29:02] 2026-03-19 01:28:09,796 | INFO     | zombie collector waiting for pid 20836
[2026-03-18 21:29:02] 2026-03-19 01:28:09,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 21:29:02] 2026-03-19 01:28:09,796 | INFO     | collected zombie processes
[2026-03-18 21:29:02] 2026-03-19 01:28:09,796 | INFO     | will attempt to kill all subprocesses of pid=20836
[2026-03-18 21:29:02] 2026-03-19 01:28:09,879 | INFO     | process IDs to be killed: [20836] (in reverse order)
[2026-03-18 21:29:02] 2026-03-19 01:28:09,931 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 21:29:02] 2026-03-19 01:28:09,932 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 21:29:02] 2026-03-19 01:28:09,935 | INFO     | did not find any defunct processes belonging to 20836
[2026-03-18 21:29:02] 2026-03-19 01:28:09,939 | INFO     | did not find any defunct processes belonging to 20836
[2026-03-18 21:29:02] 2026-03-19 01:28:09,939 | INFO     | ready for new job
[2026-03-18 21:29:02] 2026-03-19 01:28:09,939 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 21:29:02] 2026-03-19 01:28:09,940 | INFO     | **************************************
[2026-03-18 21:29:02] 2026-03-19 01:28:09,940 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 21:29:02] 2026-03-19 01:28:09,940 | INFO     | **************************************
[2026-03-18 21:29:02] 2026-03-19 01:28:09,941 | INFO     | 
[2026-03-18 21:29:02] 2026-03-19 01:28:09,941 | INFO     | architecture information:
[2026-03-18 21:29:02] 2026-03-19 01:28:09,942 | INFO     | executing command: cat /etc/os-release
[2026-03-18 21:29:02] 2026-03-19 01:28:09,956 | INFO     | cat /etc/os-release:
[2026-03-18 21:29:02] NAME="CentOS Linux"
[2026-03-18 21:29:02] VERSION="7 (Core)"
[2026-03-18 21:29:02] ID="centos"
[2026-03-18 21:29:02] ID_LIKE="rhel fedora"
[2026-03-18 21:29:02] VERSION_ID="7"
[2026-03-18 21:29:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 21:29:02] ANSI_COLOR="0;31"
[2026-03-18 21:29:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 21:29:02] HOME_URL="https://www.centos.org/"
[2026-03-18 21:29:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 21:29:02] 
[2026-03-18 21:29:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 21:29:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 21:29:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 21:29:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 21:29:02] 
[2026-03-18 21:29:02] 2026-03-19 01:28:09,957 | INFO     | **************************************
[2026-03-18 21:29:02] 2026-03-19 01:28:10,459 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-18 21:29:02] 2026-03-19 01:28:10,476 | INFO     | sufficient remaining disk space (29337059328 B)
[2026-03-18 21:29:02] 2026-03-19 01:28:10,477 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 21:29:02] 2026-03-19 01:28:10,477 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 21:29:02] 2026-03-19 01:28:10,477 | INFO     | update_server=False
[2026-03-18 21:29:02] 2026-03-19 01:28:10,477 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 21:29:02] 2026-03-19 01:28:10,477 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 21:29:02] 2026-03-19 01:28:11,058 | INFO     | all payload control threads have been joined
[2026-03-18 21:29:02] 2026-03-19 01:28:11,199 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 21:29:02] 2026-03-19 01:28:11,199 | INFO     | aborting loop
[2026-03-18 21:29:02] 2026-03-19 01:28:11,389 | INFO     | all data control threads have been joined
[2026-03-18 21:29:02] 2026-03-19 01:28:11,483 | INFO     | [job] retrieve thread has finished
[2026-03-18 21:29:02] 2026-03-19 01:28:11,483 | INFO     | [job] queue monitor thread has finished
[2026-03-18 21:29:02] 2026-03-19 01:28:11,594 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 21:29:02] 2026-03-19 01:28:11,710 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 21:29:02] 2026-03-19 01:28:11,730 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 21:29:02] 2026-03-19 01:28:11,907 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 21:29:02] 2026-03-19 01:28:12,063 | INFO     | [payload] control thread has finished
[2026-03-18 21:29:02] 2026-03-19 01:28:12,158 | INFO     | all job control threads have been joined
[2026-03-18 21:29:02] 2026-03-19 01:28:12,185 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 21:29:02] 2026-03-19 01:28:12,201 | INFO     | [job] job monitor thread has finished
[2026-03-18 21:29:02] 2026-03-19 01:28:12,260 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 21:29:02] 2026-03-19 01:28:12,277 | INFO     | [data] copytool_in thread has finished
[2026-03-18 21:29:02] 2026-03-19 01:28:12,394 | INFO     | [data] control thread has finished
[2026-03-18 21:29:02] 2026-03-19 01:28:12,925 | INFO     | [job] validate thread has finished
[2026-03-18 21:29:02] 2026-03-19 01:28:12,942 | INFO     | [payload] validate_post thread has finished
[2026-03-18 21:29:02] 2026-03-19 01:28:13,078 | INFO     | [payload] failed_post thread has finished
[2026-03-18 21:29:02] 2026-03-19 01:28:13,162 | INFO     | [job] control thread has finished
[2026-03-18 21:29:02] 2026-03-19 01:28:13,600 | INFO     | [data] copytool_out thread has finished
[2026-03-18 21:29:02] 2026-03-19 01:28:16,191 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 21:29:02] 2026-03-19 01:28:41,642 | INFO     | PID=16237 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 21:29:02] 2026-03-19 01:28:41,643 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 21:29:02] 2026-03-19 01:28:41,643 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 21:29:02] 2026-03-19 01:28:41,643 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 21:29:02] 2026-03-19 01:28:55,539 | INFO     | [monitor] cgroup control has ended
[2026-03-18 21:29:02] 2026-03-19 01:28:56,834 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140464392742720)>', '<ExcThread(monitor, started 140463080208128)>']
[2026-03-18 21:29:02] 2026-03-19 01:28:57,724 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 21:29:02] 2026-03-19 01:28:57,724 | INFO     | [monitor] control thread has ended
[2026-03-18 21:29:02] 2026-03-19 01:29:01,841 | INFO     | all workflow threads have been joined
[2026-03-18 21:29:02] 2026-03-19 01:29:01,841 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 21:29:02] 2026-03-19 01:29:01,842 | INFO     | traces error code: 0
[2026-03-18 21:29:02] 2026-03-19 01:29:01,842 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 21:29:02] 2026-03-19 01:29:01,925 [wrapper] ==== pilot stdout END ====
[2026-03-18 21:29:02] 2026-03-19 01:29:01,929 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 21:29:02] 2026-03-19 01:29:01,933 [wrapper] pilotpid: 16237
[2026-03-18 21:29:02] 2026-03-19 01:29:01,937 [wrapper] Pilot exit status: 0
[2026-03-18 21:29:02] 2026-03-19 01:29:01,953 [wrapper] pandaids: 7057257821
[2026-03-18 21:29:02] 2026-03-19 01:29:02,004 [wrapper] cleanup supervisor_pilot 10073 16238
[2026-03-18 21:29:02] 2026-03-19 01:29:02,008 [wrapper] Test setup, not cleaning
[2026-03-18 21:29:02] 2026-03-19 01:29:02,012 [wrapper] apfmon messages muted
[2026-03-18 21:29:02] 2026-03-19 01:29:02,016 [wrapper] ==== wrapper stdout END ====
[2026-03-18 21:29:02] 2026-03-19 01:29:02,020 [wrapper] ==== wrapper stderr END ====
[2026-03-18 21:29:02]  *** Error codes and diagnostics ***
[2026-03-18 21:29:02]     "exeErrorCode": 0,
[2026-03-18 21:29:02]     "exeErrorDiag": "",
[2026-03-18 21:29:02]     "pilotErrorCode": 0,
[2026-03-18 21:29:02]     "pilotErrorDiag": "",
[2026-03-18 21:29:02]  *** Listing of results directory ***
[2026-03-18 21:29:02] total 410948
[2026-03-18 21:29:02] -rw-r--r-- 1 boincer umatlas    585013 Mar 18 09:20 pilot3.tar.gz
[2026-03-18 21:29:02] -rwx------ 1 boincer umatlas     36322 Mar 18 09:25 runpilot2-wrapper.sh
[2026-03-18 21:29:02] -rw-r--r-- 1 boincer umatlas      5111 Mar 18 09:32 queuedata.json
[2026-03-18 21:29:02] -rw-r--r-- 1 boincer umatlas       100 Mar 18 20:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 21:29:02] -rwxr-xr-x 1 boincer umatlas      7986 Mar 18 20:00 run_atlas
[2026-03-18 21:29:02] -rw-r--r-- 1 boincer umatlas       105 Mar 18 20:00 job.xml
[2026-03-18 21:29:02] -rw-r--r-- 2 boincer umatlas 215998301 Mar 18 20:00 EVNT.48967083._001017.pool.root.1
[2026-03-18 21:29:02] -rw-r--r-- 2 boincer umatlas     15845 Mar 18 20:00 start_atlas.sh
[2026-03-18 21:29:02] drwxrwx--x 2 boincer umatlas      4096 Mar 18 20:00 shared
[2026-03-18 21:29:02] -rw-r--r-- 2 boincer umatlas    597518 Mar 18 20:00 input.tar.gz
[2026-03-18 21:29:02] -rw-r--r-- 1 boincer umatlas         0 Mar 18 20:00 boinc_lockfile
[2026-03-18 21:29:02] -rw-r--r-- 1 boincer umatlas      2557 Mar 18 20:00 pandaJob.out
[2026-03-18 21:29:02] -rw------- 1 boincer umatlas        57 Mar 18 20:00 setup.sh.local
[2026-03-18 21:29:02] -rw------- 1 boincer umatlas   1010350 Mar 18 20:00 agis_schedconf.cvmfs.json
[2026-03-18 21:29:02] -rw------- 1 boincer umatlas   1511579 Mar 18 20:00 agis_ddmendpoints.agis.ALL.json
[2026-03-18 21:29:02] -rw------- 1 boincer umatlas       444 Mar 18 20:00 workernode_map.json
[2026-03-18 21:29:02] drwx------ 5 boincer umatlas      4096 Mar 18 20:00 pilot3
[2026-03-18 21:29:02] -rw------- 1 boincer umatlas 198613998 Mar 18 21:27 HITS.48967085._025246.pool.root.1
[2026-03-18 21:29:02] -rw------- 1 boincer umatlas        95 Mar 18 21:27 pilot_heartbeat.json
[2026-03-18 21:29:02] -rw-r--r-- 1 boincer umatlas      5952 Mar 18 21:27 init_data.xml
[2026-03-18 21:29:02] -rw-r--r-- 1 boincer umatlas       529 Mar 18 21:27 boinc_task_state.xml
[2026-03-18 21:29:02] -rw------- 1 boincer umatlas      1047 Mar 18 21:27 memory_monitor_summary.json
[2026-03-18 21:29:02] -rw------- 1 boincer umatlas    379272 Mar 18 21:28 log.48967085._025246.job.log.tgz.1
[2026-03-18 21:29:02] -rw------- 1 boincer umatlas      6419 Mar 18 21:28 heartbeat.json
[2026-03-18 21:29:02] -rw-r--r-- 1 boincer umatlas      8192 Mar 18 21:28 boinc_mmap_file
[2026-03-18 21:29:02] -rw-r--r-- 1 boincer umatlas        27 Mar 18 21:28 wrapper_checkpoint.txt
[2026-03-18 21:29:02] -rw------- 1 boincer umatlas      4742 Mar 18 21:29 pilotlog.txt
[2026-03-18 21:29:02] -rw------- 1 boincer umatlas    754416 Mar 18 21:29 log.48967085._025246.job.log.1
[2026-03-18 21:29:02] -rw------- 1 boincer umatlas       357 Mar 18 21:29 output.list
[2026-03-18 21:29:02] -rw-r--r-- 1 boincer umatlas       620 Mar 18 21:29 runtime_log
[2026-03-18 21:29:02] -rw------- 1 boincer umatlas   1146880 Mar 18 21:29 result.tar.gz
[2026-03-18 21:29:02] -rw-r--r-- 1 boincer umatlas      9338 Mar 18 21:29 runtime_log.err
[2026-03-18 21:29:02] -rw------- 1 boincer umatlas       658 Mar 18 21:29 L32NDmu45M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTYzLDm2Zfscn.diag
[2026-03-18 21:29:02] -rw-r--r-- 1 boincer umatlas     21608 Mar 18 21:29 stderr.txt
[2026-03-18 21:29:02] HITS file was successfully produced:
[2026-03-18 21:29:02] -rw------- 1 boincer umatlas 198613998 Mar 18 21:27 shared/HITS.pool.root.1
[2026-03-18 21:29:02]  *** Contents of shared directory: ***
[2026-03-18 21:29:02] total 406616
[2026-03-18 21:29:02] -rw-r--r-- 2 boincer umatlas 215998301 Mar 18 20:00 ATLAS.root_0
[2026-03-18 21:29:02] -rw-r--r-- 2 boincer umatlas     15845 Mar 18 20:00 start_atlas.sh
[2026-03-18 21:29:02] -rw-r--r-- 2 boincer umatlas    597518 Mar 18 20:00 input.tar.gz
[2026-03-18 21:29:02] -rw------- 1 boincer umatlas 198613998 Mar 18 21:27 HITS.pool.root.1
[2026-03-18 21:29:02] -rw------- 1 boincer umatlas   1146880 Mar 18 21:29 result.tar.gz
21:29:04 (12233): run_atlas exited; CPU time 55545.853757
21:29:04 (12233): called boinc_finish(0)

</stderr_txt>
]]>

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