Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:05:01 (2940294): wrapper (7.7.26015): starting
19:05:01 (2940294): wrapper: running run_atlas (--nthreads 2)
[2026-03-19 19:05:01] Arguments: --nthreads 2
[2026-03-19 19:05:01] Threads: 2
[2026-03-19 19:05:01] Checking for CVMFS
[2026-03-19 19:05:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 19:05:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 19:05:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 19:05:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 19:05:01] 2.9.2.0 2667927 4624 56160 157465 0 50 31424985 36864000 0 130560 0 850450 99.965 161188 13049 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-19 19:05:01] CVMFS is ok
[2026-03-19 19:05:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 19:05:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 19:05:01] Further information can be found at the LHC@home message board.
[2026-03-19 19:05:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 19:05:01] Checking for apptainer binary...
[2026-03-19 19:05:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 19:05:01] Running /usr/bin/apptainer --version
[2026-03-19 19:05:01] apptainer version 1.4.1-1.1
[2026-03-19 19:05:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 19:05:01] thA389
[2026-03-19 19:05:01] apptainer works
[2026-03-19 19:05:01] Set ATHENA_PROC_NUMBER=2
[2026-03-19 19:05:01] Set ATHENA_CORE_NUMBER=2
[2026-03-19 19:05:01] Starting ATLAS job with PandaID=7057116379
[2026-03-19 19:05:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 21:30:39]  *** The last 200 lines of the pilot log: ***
[2026-03-19 21:30:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 21:30:39] HOME_URL="https://www.centos.org/"
[2026-03-19 21:30:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 21:30:39] 
[2026-03-19 21:30:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 21:30:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 21:30:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 21:30:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 21:30:39] 
[2026-03-19 21:30:39] 2026-03-19 20:30:00,744 | INFO     | **************************************
[2026-03-19 21:30:39] 2026-03-19 20:30:00,923 | WARNING  | process 2948734 can no longer be monitored (due to stat problems) - aborting
[2026-03-19 21:30:39] 2026-03-19 20:30:00,944 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 21:30:39] 2026-03-19 20:30:00,970 | INFO     | number of running child processes to parent process 2948734: 1
[2026-03-19 21:30:39] 2026-03-19 20:30:00,970 | INFO     | maximum number of monitored processes: 6
[2026-03-19 21:30:39] 2026-03-19 20:30:00,970 | INFO     | aborting job monitoring since job object (job id=7057116379) has expired
[2026-03-19 21:30:39] 2026-03-19 20:30:01,247 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-19 21:30:39] 2026-03-19 20:30:01,259 | INFO     | sufficient remaining disk space (831283789824 B)
[2026-03-19 21:30:39] 2026-03-19 20:30:01,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 21:30:39] 2026-03-19 20:30:01,259 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 21:30:39] 2026-03-19 20:30:01,259 | INFO     | update_server=False
[2026-03-19 21:30:39] 2026-03-19 20:30:01,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 21:30:39] 2026-03-19 20:30:01,260 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 21:30:39] 2026-03-19 20:30:01,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 21:30:39] 2026-03-19 20:30:01,260 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 21:30:39] 2026-03-19 20:30:01,260 | INFO     | will abort loop
[2026-03-19 21:30:39] 2026-03-19 20:30:01,338 | INFO     | all payload control threads have been joined
[2026-03-19 21:30:39] 2026-03-19 20:30:01,348 | INFO     | all data control threads have been joined
[2026-03-19 21:30:39] 2026-03-19 20:30:01,809 | INFO     | all job control threads have been joined
[2026-03-19 21:30:39] 2026-03-19 20:30:02,261 | INFO     | [job] queue monitor thread has finished
[2026-03-19 21:30:39] 2026-03-19 20:30:02,261 | INFO     | [job] retrieve thread has finished
[2026-03-19 21:30:39] 2026-03-19 20:30:02,265 | INFO     | [job] job monitor thread has finished
[2026-03-19 21:30:39] 2026-03-19 20:30:02,344 | INFO     | [payload] control thread has finished
[2026-03-19 21:30:39] 2026-03-19 20:30:02,353 | INFO     | [data] control thread has finished
[2026-03-19 21:30:39] 2026-03-19 20:30:02,651 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 21:30:39] 2026-03-19 20:30:02,815 | INFO     | [job] control thread has finished
[2026-03-19 21:30:39] 2026-03-19 20:30:03,143 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 21:30:39] 2026-03-19 20:30:03,157 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 21:30:39] 2026-03-19 20:30:03,202 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 21:30:39] 2026-03-19 20:30:03,235 | INFO     | [job] validate thread has finished
[2026-03-19 21:30:39] 2026-03-19 20:30:03,266 | INFO     | [data] copytool_out thread has finished
[2026-03-19 21:30:39] 2026-03-19 20:30:03,323 | INFO     | [payload] failed_post thread has finished
[2026-03-19 21:30:39] 2026-03-19 20:30:03,323 | INFO     | [data] copytool_in thread has finished
[2026-03-19 21:30:39] 2026-03-19 20:30:03,741 | INFO     | [payload] validate_post thread has finished
[2026-03-19 21:30:39] 2026-03-19 20:30:06,658 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 21:30:39] 2026-03-19 20:30:12,140 | INFO     | job.realtimelogging is not enabled
[2026-03-19 21:30:39] 2026-03-19 20:30:13,145 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 21:30:39] 2026-03-19 20:30:30,298 | INFO     | 8685s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-19 21:30:39] 2026-03-19 20:30:31,341 | INFO     | PID=2944324 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 21:30:39] 2026-03-19 20:30:31,342 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 21:30:39] 2026-03-19 20:30:31,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 21:30:39] 2026-03-19 20:30:31,342 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 21:30:39] 2026-03-19 20:30:34,382 | INFO     | [monitor] cgroup control has ended
[2026-03-19 21:30:39] 2026-03-19 20:30:34,396 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139929208035136)>', '<ExcThread(monitor, started 139928457426688)>']
[2026-03-19 21:30:39] 2026-03-19 20:30:35,363 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 21:30:39] 2026-03-19 20:30:35,364 | INFO     | [monitor] control thread has ended
[2026-03-19 21:30:39] 2026-03-19 20:30:39,422 | INFO     | all workflow threads have been joined
[2026-03-19 21:30:39] 2026-03-19 20:30:39,422 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 21:30:39] 2026-03-19 20:30:39,423 | INFO     | traces error code: 0
[2026-03-19 21:30:39] 2026-03-19 20:30:39,423 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 21:30:39] 2026-03-19 20:30:39,466 [wrapper] ==== pilot stdout END ====
[2026-03-19 21:30:39] 2026-03-19 20:30:39,468 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 21:30:39] 2026-03-19 20:30:39,471 [wrapper] pilotpid: 2944324
[2026-03-19 21:30:39] 2026-03-19 20:30:39,473 [wrapper] Pilot exit status: 0
[2026-03-19 21:30:39] 2026-03-19 20:30:39,479 [wrapper] pandaids: 7057116379
[2026-03-19 21:30:39] 2026-03-19 20:30:39,490 [wrapper] cleanup supervisor_pilot 2954555 2944325
[2026-03-19 21:30:39] 2026-03-19 20:30:39,493 [wrapper] Test setup, not cleaning
[2026-03-19 21:30:39] 2026-03-19 20:30:39,495 [wrapper] apfmon messages muted
[2026-03-19 21:30:39] 2026-03-19 20:30:39,496 [wrapper] ==== wrapper stdout END ====
[2026-03-19 21:30:39] 2026-03-19 20:30:39,498 [wrapper] ==== wrapper stderr END ====
[2026-03-19 21:30:39]  *** Error codes and diagnostics ***
[2026-03-19 21:30:39]     "exeErrorCode": 0,
[2026-03-19 21:30:39]     "exeErrorDiag": "",
[2026-03-19 21:30:39]     "pilotErrorCode": 0,
[2026-03-19 21:30:39]     "pilotErrorDiag": "",
[2026-03-19 21:30:39]  *** Listing of results directory ***
[2026-03-19 21:30:39] total 405592
[2026-03-19 21:30:39] -rw-r--r-- 1 boinc boinc    585013 Mar 18 14:20 pilot3.tar.gz
[2026-03-19 21:30:39] -rwx------ 1 boinc boinc     36322 Mar 18 14:25 runpilot2-wrapper.sh
[2026-03-19 21:30:39] -rw-r--r-- 1 boinc boinc      5111 Mar 18 14:30 queuedata.json
[2026-03-19 21:30:39] -rw-r--r-- 1 boinc boinc       100 Mar 19 19:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 21:30:39] -rwxr-xr-x 1 boinc boinc      7986 Mar 19 19:05 run_atlas
[2026-03-19 21:30:39] -rw-r--r-- 1 boinc boinc       105 Mar 19 19:05 job.xml
[2026-03-19 21:30:39] -rw-r--r-- 2 boinc boinc 212971887 Mar 19 19:05 EVNT.48967083._000995.pool.root.1
[2026-03-19 21:30:39] drwxrwx--x 2 boinc boinc      4096 Mar 19 19:05 shared
[2026-03-19 21:30:39] -rw-r--r-- 2 boinc boinc    597527 Mar 19 19:05 input.tar.gz
[2026-03-19 21:30:39] -rw-r--r-- 2 boinc boinc     15845 Mar 19 19:05 start_atlas.sh
[2026-03-19 21:30:39] -rw-r--r-- 1 boinc boinc         0 Mar 19 19:05 boinc_setup_complete
[2026-03-19 21:30:39] -rw-r--r-- 1 boinc boinc      6205 Mar 19 19:05 init_data.xml
[2026-03-19 21:30:39] -rw-r--r-- 1 boinc boinc         0 Mar 19 19:05 boinc_lockfile
[2026-03-19 21:30:39] -rw-r--r-- 1 boinc boinc      2550 Mar 19 19:05 pandaJob.out
[2026-03-19 21:30:39] -rw------- 1 boinc boinc   1010708 Mar 19 19:05 agis_schedconf.cvmfs.json
[2026-03-19 21:30:39] -rw------- 1 boinc boinc   1511579 Mar 19 19:05 agis_ddmendpoints.agis.ALL.json
[2026-03-19 21:30:39] -rw------- 1 boinc boinc       425 Mar 19 19:05 workernode_map.json
[2026-03-19 21:30:39] drwx------ 5 boinc boinc      4096 Mar 19 19:05 pilot3
[2026-03-19 21:30:39] -rw------- 1 boinc boinc 195373190 Mar 19 21:29 HITS.48967085._024828.pool.root.1
[2026-03-19 21:30:39] -rw-r--r-- 1 boinc boinc       529 Mar 19 21:29 boinc_task_state.xml
[2026-03-19 21:30:39] -rw------- 1 boinc boinc      1009 Mar 19 21:29 memory_monitor_summary.json
[2026-03-19 21:30:39] -rw------- 1 boinc boinc        95 Mar 19 21:29 pilot_heartbeat.json
[2026-03-19 21:30:39] -rw------- 1 boinc boinc    289465 Mar 19 21:29 log.48967085._024828.job.log.tgz.1
[2026-03-19 21:30:39] -rw------- 1 boinc boinc      6295 Mar 19 21:29 heartbeat.json
[2026-03-19 21:30:39] -rw-r--r-- 1 boinc boinc      8192 Mar 19 21:30 boinc_mmap_file
[2026-03-19 21:30:39] -rw-r--r-- 1 boinc boinc        27 Mar 19 21:30 wrapper_checkpoint.txt
[2026-03-19 21:30:39] -rw------- 1 boinc boinc      5459 Mar 19 21:30 pilotlog.txt
[2026-03-19 21:30:39] -rw------- 1 boinc boinc   1238698 Mar 19 21:30 log.48967085._024828.job.log.1
[2026-03-19 21:30:39] -rw------- 1 boinc boinc       357 Mar 19 21:30 output.list
[2026-03-19 21:30:39] -rw-r--r-- 1 boinc boinc       620 Mar 19 21:30 runtime_log
[2026-03-19 21:30:39] -rw------- 1 boinc boinc   1546240 Mar 19 21:30 result.tar.gz
[2026-03-19 21:30:39] -rw-r--r-- 1 boinc boinc      8896 Mar 19 21:30 runtime_log.err
[2026-03-19 21:30:39] -rw------- 1 boinc boinc       658 Mar 19 21:30 Za0NDmY45M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmGVzLDmgtOAcm.diag
[2026-03-19 21:30:39] -rw-r--r-- 1 boinc boinc      9275 Mar 19 21:30 stderr.txt
[2026-03-19 21:30:39] HITS file was successfully produced:
[2026-03-19 21:30:39] -rw------- 1 boinc boinc 195373190 Mar 19 21:29 shared/HITS.pool.root.1
[2026-03-19 21:30:39]  *** Contents of shared directory: ***
[2026-03-19 21:30:39] total 400892
[2026-03-19 21:30:39] -rw-r--r-- 2 boinc boinc 212971887 Mar 19 19:05 ATLAS.root_0
[2026-03-19 21:30:39] -rw-r--r-- 2 boinc boinc    597527 Mar 19 19:05 input.tar.gz
[2026-03-19 21:30:39] -rw-r--r-- 2 boinc boinc     15845 Mar 19 19:05 start_atlas.sh
[2026-03-19 21:30:39] -rw------- 1 boinc boinc 195373190 Mar 19 21:29 HITS.pool.root.1
[2026-03-19 21:30:39] -rw------- 1 boinc boinc   1546240 Mar 19 21:30 result.tar.gz
21:30:40 (2940294): run_atlas exited; CPU time 16687.833220
21:30:40 (2940294): called boinc_finish(0)

</stderr_txt>
]]>

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