Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:30:41 (4085866): wrapper (7.7.26015): starting
14:30:41 (4085866): wrapper: running run_atlas (--nthreads 12)
[2026-03-19 14:30:41] Arguments: --nthreads 12
[2026-03-19 14:30:41] Threads: 12
[2026-03-19 14:30:41] Checking for CVMFS
[2026-03-19 14:30:41] No cvmfs_config command found, will try listing directly
[2026-03-19 14:30:41] CVMFS is ok
[2026-03-19 14:30:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 14:30:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 14:30:41] Further information can be found at the LHC@home message board.
[2026-03-19 14:30:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 14:30:41] Checking for apptainer binary...
[2026-03-19 14:30:41] which: no apptainer in ((null))
[2026-03-19 14:30:41] apptainer is not installed, using version from CVMFS
[2026-03-19 14:30:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 14:30:42] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot192/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-19 14:30:42] apptainer works
[2026-03-19 14:30:42] Set ATHENA_PROC_NUMBER=12
[2026-03-19 14:30:42] Set ATHENA_CORE_NUMBER=12
[2026-03-19 14:30:42] Starting ATLAS job with PandaID=7058949904
[2026-03-19 14:30:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot192/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 15:53:24]  *** The last 200 lines of the pilot log: ***
[2026-03-19 15:53:24]  protocol_id=None
[2026-03-19 15:53:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-19 15:53:24]  replicas=None
[2026-03-19 15:53:24]  scope=mc23_13p6TeV
[2026-03-19 15:53:24]  status=None
[2026-03-19 15:53:24]  status_code=0
[2026-03-19 15:53:24]  storage_token=
[2026-03-19 15:53:24]  surl=/var/lib/boinc/var/slot192/slots/1/PanDA_Pilot-7058949904/log.49178033._000420.job.log.tgz.1
[2026-03-19 15:53:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/b4/log.49178033._000420.job.log.tgz.1
[2026-03-19 15:53:24]  workdir=None
[2026-03-19 15:53:24] ]
[2026-03-19 15:53:24] 2026-03-19 14:52:46,362 | INFO     | time since job start (4913s) is within the limit (345600.0s)
[2026-03-19 15:53:24] 2026-03-19 14:52:46,379 | INFO     | transferring file log.49178033._000420.job.log.tgz.1 from /var/lib/boinc/var/slot192/slots/1/PanDA_Pilot-7058949904/log.49178033._000420.job.log.tgz.1 to /var/lib/
[2026-03-19 15:53:24] 2026-03-19 14:52:46,380 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot192/slots/1/PanDA_Pilot-7058949904/log.49178033._000420.job.log.tgz.1 /var/lib/boinc/var/slot192/slots/1/
[2026-03-19 15:53:24] 2026-03-19 14:52:46,398 | INFO     | adding to output.list: log.49178033._000420.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/b4/log.49178033._000420.job.log.tg
[2026-03-19 15:53:24] 2026-03-19 14:52:46,399 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-19 15:53:24] 2026-03-19 14:52:46,399 | INFO     | summary of transferred files:
[2026-03-19 15:53:24] 2026-03-19 14:52:46,399 | INFO     |  -- lfn=log.49178033._000420.job.log.tgz.1, status_code=0, status=transferred
[2026-03-19 15:53:24] 2026-03-19 14:52:46,399 | INFO     | stage-out finished correctly
[2026-03-19 15:53:24] 2026-03-19 14:52:48,385 | INFO     | time since job start (4915s) is within the limit (345600.0s)
[2026-03-19 15:53:24] 2026-03-19 14:52:48,731 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-19 15:53:24] 2026-03-19 14:52:50,390 | INFO     | time since job start (4917s) is within the limit (345600.0s)
[2026-03-19 15:53:24] 2026-03-19 14:52:50,390 | INFO     | 4921s have passed since pilot start - server update state is 'RUNNING'
[2026-03-19 15:53:24] 2026-03-19 14:52:50,509 | INFO     | job 7058949904 has state=finished
[2026-03-19 15:53:24] 2026-03-19 14:52:50,509 | INFO     | preparing for final server update for job 7058949904 in state='finished'
[2026-03-19 15:53:24] 2026-03-19 14:52:50,509 | INFO     | reading metadata from: /var/lib/boinc/var/slot192/slots/1/PanDA_Pilot-7058949904/jobReport.json
[2026-03-19 15:53:24] 2026-03-19 14:52:50,511 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot192/slots/1/workernode_map.json
[2026-03-19 15:53:24] 2026-03-19 14:52:50,511 | INFO     | this job has now completed (state=finished)
[2026-03-19 15:53:24] 2026-03-19 14:52:50,511 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 15:53:24] 2026-03-19 14:52:50,511 | INFO     | log transfer has been attempted: DONE
[2026-03-19 15:53:24] 2026-03-19 14:52:50,511 | INFO     | job 7058949904 has finished - writing final server update
[2026-03-19 15:53:24] 2026-03-19 14:52:50,512 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3586419/.job.ad'
[2026-03-19 15:53:24] 2026-03-19 14:52:50,512 | INFO     | total number of processed events: 400 (read)
[2026-03-19 15:53:24] 2026-03-19 14:52:50,529 | INFO     | using path: /var/lib/boinc/var/slot192/slots/1/PanDA_Pilot-7058949904/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 15:53:24] 2026-03-19 14:52:50,530 | INFO     | extracted standard info from prmon json
[2026-03-19 15:53:24] 2026-03-19 14:52:50,530 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 15:53:24] 2026-03-19 14:52:50,530 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 15:53:24] 2026-03-19 14:52:50,530 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 15:53:24] 2026-03-19 14:52:50,530 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 15:53:24] 2026-03-19 14:52:50,531 | INFO     | fitting pss+swap vs Time
[2026-03-19 15:53:24] 2026-03-19 14:52:50,531 | INFO     | sum of square deviations: 125630262.5
[2026-03-19 15:53:24] 2026-03-19 14:52:50,532 | INFO     | sum of deviations: -1064785988.0000001
[2026-03-19 15:53:24] 2026-03-19 14:52:50,532 | INFO     | mean x: 1773929605.5
[2026-03-19 15:53:24] 2026-03-19 14:52:50,532 | INFO     | mean y: 2730919.891891892
[2026-03-19 15:53:24] 2026-03-19 14:52:50,532 | INFO     | intersect: 15037765871.241835
[2026-03-19 15:53:24] 2026-03-19 14:52:50,532 | INFO     | chi2: 0.0008277661105953907
[2026-03-19 15:53:24] 2026-03-19 14:52:50,532 | INFO     | current memory leak: -8.48 B/s (using 74 data points, chi2=0.00)
[2026-03-19 15:53:24] 2026-03-19 14:52:50,532 | INFO     | could have reported an average CPU frequency of 3624 MHz (6 samples)
[2026-03-19 15:53:24] 2026-03-19 14:52:50,532 | INFO     | ..............................
[2026-03-19 15:53:24] 2026-03-19 14:52:50,532 | INFO     | . Timing measurements:
[2026-03-19 15:53:24] 2026-03-19 14:52:50,532 | INFO     | . get job = 0 s
[2026-03-19 15:53:24] 2026-03-19 14:52:50,532 | INFO     | . initial setup = 4 s
[2026-03-19 15:53:24] 2026-03-19 14:52:50,532 | INFO     | . payload setup = 6 s
[2026-03-19 15:53:24] 2026-03-19 14:52:50,532 | INFO     | . stage-in = 0 s
[2026-03-19 15:53:24] 2026-03-19 14:52:50,532 | INFO     | . payload execution = 4891 s
[2026-03-19 15:53:24] 2026-03-19 14:52:50,532 | INFO     | . stage-out = 0 s
[2026-03-19 15:53:24] 2026-03-19 14:52:50,532 | INFO     | . log creation = 0 s
[2026-03-19 15:53:24] 2026-03-19 14:52:50,532 | INFO     | ..............................
[2026-03-19 15:53:24] 2026-03-19 14:52:50,581 | INFO     | 
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | job summary report
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | --------------------------------------------------
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | PanDA job id: 7058949904
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | task id: 49178033
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | errors: (none)
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | pilot state: finished 
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | transexitcode: 0
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | exeerrorcode: 0
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | exeerrordiag: 
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | exitcode: 0
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | exitmsg: OK
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | cpuconsumptiontime: 55125 s
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | nevents: 400
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | neventsw: 0
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | pid: 4096245
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | pgrp: 4096245
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | corecount: 12
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | event service: False
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | sizes: {0: 2279982, 1: 2280187, 11: 2280215, 4901: 2306552, 4902: 2315574, 4904: 2315630, 4906: 2315952}
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | --------------------------------------------------
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | 
[2026-03-19 15:53:24] 2026-03-19 14:52:50,582 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot192/slots/1
[2026-03-19 15:53:24] 2026-03-19 14:52:50,602 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | job 7058949904 has completed (purged errors)
[2026-03-19 15:53:24] 2026-03-19 14:52:50,603 | INFO     | overall cleanup function is called
[2026-03-19 15:53:24] 2026-03-19 14:52:51,610 | INFO     | --- collectZombieJob: --- 10, [4096245]
[2026-03-19 15:53:24] 2026-03-19 14:52:51,611 | INFO     | zombie collector waiting for pid 4096245
[2026-03-19 15:53:24] 2026-03-19 14:52:51,611 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 15:53:24] 2026-03-19 14:52:51,611 | INFO     | collected zombie processes
[2026-03-19 15:53:24] 2026-03-19 14:52:51,611 | INFO     | will attempt to kill all subprocesses of pid=4096245
[2026-03-19 15:53:24] 2026-03-19 14:52:52,442 | INFO     | process IDs to be killed: [4096245] (in reverse order)
[2026-03-19 15:53:24] 2026-03-19 14:52:52,524 | WARNING  | process 4096245 can no longer be monitored (due to stat problems) - aborting
[2026-03-19 15:53:24] 2026-03-19 14:52:52,582 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 15:53:24] 2026-03-19 14:52:52,582 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 15:53:24] 2026-03-19 14:52:52,632 | INFO     | did not find any defunct processes belonging to 4096245
[2026-03-19 15:53:24] 2026-03-19 14:52:52,675 | INFO     | did not find any defunct processes belonging to 4096245
[2026-03-19 15:53:24] 2026-03-19 14:52:52,676 | INFO     | ready for new job
[2026-03-19 15:53:24] 2026-03-19 14:52:52,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 15:53:24] 2026-03-19 14:52:52,677 | INFO     | **************************************
[2026-03-19 15:53:24] 2026-03-19 14:52:52,677 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 15:53:24] 2026-03-19 14:52:52,677 | INFO     | **************************************
[2026-03-19 15:53:24] 2026-03-19 14:52:52,677 | INFO     | 
[2026-03-19 15:53:24] 2026-03-19 14:52:52,683 | INFO     | architecture information:
[2026-03-19 15:53:24] 2026-03-19 14:52:52,683 | INFO     | executing command: cat /etc/os-release
[2026-03-19 15:53:24] 2026-03-19 14:52:52,696 | INFO     | cat /etc/os-release:
[2026-03-19 15:53:24] NAME="CentOS Linux"
[2026-03-19 15:53:24] VERSION="7 (Core)"
[2026-03-19 15:53:24] ID="centos"
[2026-03-19 15:53:24] ID_LIKE="rhel fedora"
[2026-03-19 15:53:24] VERSION_ID="7"
[2026-03-19 15:53:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 15:53:24] ANSI_COLOR="0;31"
[2026-03-19 15:53:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 15:53:24] HOME_URL="https://www.centos.org/"
[2026-03-19 15:53:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 15:53:24] 
[2026-03-19 15:53:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 15:53:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 15:53:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 15:53:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 15:53:24] 
[2026-03-19 15:53:24] 2026-03-19 14:52:52,697 | INFO     | **************************************
[2026-03-19 15:53:24] 2026-03-19 14:52:52,842 | INFO     | using path: /var/lib/boinc/var/slot192/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 15:53:24] 2026-03-19 14:52:53,160 | INFO     | number of running child processes to parent process 4096245: 1
[2026-03-19 15:53:24] 2026-03-19 14:52:53,160 | INFO     | maximum number of monitored processes: 6
[2026-03-19 15:53:24] 2026-03-19 14:52:53,160 | INFO     | aborting job monitoring since job object (job id=7058949904) has expired
[2026-03-19 15:53:24] 2026-03-19 14:52:53,200 | INFO     | executing command: df -mP /var/lib/boinc/var/slot192/slots/1
[2026-03-19 15:53:24] 2026-03-19 14:52:53,212 | INFO     | sufficient remaining disk space (289268563968 B)
[2026-03-19 15:53:24] 2026-03-19 14:52:53,212 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 15:53:24] 2026-03-19 14:52:53,212 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 15:53:24] 2026-03-19 14:52:53,212 | INFO     | update_server=False
[2026-03-19 15:53:24] 2026-03-19 14:52:53,212 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 15:53:24] 2026-03-19 14:52:53,213 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 15:53:24] 2026-03-19 14:52:53,213 | INFO     | will abort loop
[2026-03-19 15:53:24] 2026-03-19 14:52:53,494 | INFO     | all data control threads have been joined
[2026-03-19 15:53:24] 2026-03-19 14:52:53,959 | INFO     | all payload control threads have been joined
[2026-03-19 15:53:24] 2026-03-19 14:52:54,097 | INFO     | all job control threads have been joined
[2026-03-19 15:53:24] 2026-03-19 14:52:54,218 | INFO     | [job] retrieve thread has finished
[2026-03-19 15:53:24] 2026-03-19 14:52:54,218 | INFO     | [job] job monitor thread has finished
[2026-03-19 15:53:24] 2026-03-19 14:52:54,271 | INFO     | [payload] failed_post thread has finished
[2026-03-19 15:53:24] 2026-03-19 14:52:54,379 | INFO     | [job] validate thread has finished
[2026-03-19 15:53:24] 2026-03-19 14:52:54,379 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 15:53:24] 2026-03-19 14:52:54,456 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 15:53:24] 2026-03-19 14:52:54,500 | INFO     | [data] control thread has finished
[2026-03-19 15:53:24] 2026-03-19 14:52:54,530 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 15:53:24] 2026-03-19 14:52:54,621 | INFO     | [data] copytool_in thread has finished
[2026-03-19 15:53:24] 2026-03-19 14:52:54,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 15:53:24] 2026-03-19 14:52:54,886 | INFO     | [payload] validate_post thread has finished
[2026-03-19 15:53:24] 2026-03-19 14:52:54,965 | INFO     | [payload] control thread has finished
[2026-03-19 15:53:24] 2026-03-19 14:52:55,102 | INFO     | [job] control thread has finished
[2026-03-19 15:53:24] 2026-03-19 14:52:55,285 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 15:53:24] 2026-03-19 14:52:55,591 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 15:53:24] 2026-03-19 14:52:56,462 | INFO     | [data] copytool_out thread has finished
[2026-03-19 15:53:24] 2026-03-19 14:52:56,596 | INFO     | [job] queue monitor thread has finished
[2026-03-19 15:53:24] 2026-03-19 14:52:58,790 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 15:53:24] 2026-03-19 14:53:00,562 | INFO     | [monitor] cgroup control has ended
[2026-03-19 15:53:24] 2026-03-19 14:53:04,030 | INFO     | job.realtimelogging is not enabled
[2026-03-19 15:53:24] 2026-03-19 14:53:05,039 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 15:53:24] 2026-03-19 14:53:05,852 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22633606084416)>', '<ExcThread(monitor, started 22633365382912)>']
[2026-03-19 15:53:24] 2026-03-19 14:53:10,871 | INFO     | all workflow threads have been joined
[2026-03-19 15:53:24] 2026-03-19 14:53:10,871 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 15:53:24] 2026-03-19 14:53:10,871 | INFO     | traces error code: 0
[2026-03-19 15:53:24] 2026-03-19 14:53:10,871 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 15:53:24] 2026-03-19 14:53:23,858 | INFO     | PID=4090445 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 15:53:24] 2026-03-19 14:53:23,858 | INFO     | .. there are 13 such processes running
[2026-03-19 15:53:24] 2026-03-19 14:53:23,858 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 15:53:24] 2026-03-19 14:53:23,858 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 15:53:24] 2026-03-19 14:53:23,858 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 15:53:24] 2026-03-19 14:53:23,858 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 15:53:24] 2026-03-19 14:53:23,858 | CRITICAL | thread 'MainThread' is not alive
[2026-03-19 15:53:24] 2026-03-19 14:53:23,858 | INFO     | [monitor] control thread has ended
[2026-03-19 15:53:24] 2026-03-19 14:53:23,989 [wrapper] ==== pilot stdout END ====
[2026-03-19 15:53:24] 2026-03-19 14:53:23,991 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 15:53:24] 2026-03-19 14:53:23,996 [wrapper] pilotpid: 4090445
[2026-03-19 15:53:24] 2026-03-19 14:53:23,998 [wrapper] Pilot exit status: 0
[2026-03-19 15:53:24] 2026-03-19 14:53:24,005 [wrapper] pandaids: 7058949904
[2026-03-19 15:53:24] 2026-03-19 14:53:24,100 [wrapper] cleanup supervisor_pilot  278703 4090446
[2026-03-19 15:53:24] 2026-03-19 14:53:24,102 [wrapper] Test setup, not cleaning
[2026-03-19 15:53:24] 2026-03-19 14:53:24,104 [wrapper] apfmon messages muted
[2026-03-19 15:53:24] 2026-03-19 14:53:24,106 [wrapper] ==== wrapper stdout END ====
[2026-03-19 15:53:24] 2026-03-19 14:53:24,108 [wrapper] ==== wrapper stderr END ====
[2026-03-19 15:53:24]  *** Error codes and diagnostics ***
[2026-03-19 15:53:24]     "exeErrorCode": 0,
[2026-03-19 15:53:24]     "exeErrorDiag": "",
[2026-03-19 15:53:24]     "pilotErrorCode": 0,
[2026-03-19 15:53:24]     "pilotErrorDiag": "",
[2026-03-19 15:53:24]  *** Listing of results directory ***
[2026-03-19 15:53:24] total 495592
[2026-03-19 15:53:24] -rw-r--r--. 1 boinc boinc    585013 Mar 18 14:20 pilot3.tar.gz
[2026-03-19 15:53:24] -rwx------. 1 boinc boinc     36322 Mar 18 14:20 runpilot2-wrapper.sh
[2026-03-19 15:53:24] -rw-r--r--. 1 boinc boinc      5111 Mar 18 14:22 queuedata.json
[2026-03-19 15:53:24] -rw-r--r--. 1 boinc boinc       100 Mar 19 14:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 15:53:24] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 14:30 run_atlas
[2026-03-19 15:53:24] -rw-r--r--. 1 boinc boinc       105 Mar 19 14:30 job.xml
[2026-03-19 15:53:24] -rw-r--r--. 1 boinc boinc      6711 Mar 19 14:30 init_data.xml
[2026-03-19 15:53:24] -rw-r--r--. 2 boinc boinc 248097955 Mar 19 14:30 EVNT.49127910._000017.pool.root.1
[2026-03-19 15:53:24] -rw-r--r--. 2 boinc boinc     15845 Mar 19 14:30 start_atlas.sh
[2026-03-19 15:53:24] drwxrwx--x. 2 boinc boinc      4096 Mar 19 14:30 shared
[2026-03-19 15:53:24] -rw-r--r--. 2 boinc boinc    597540 Mar 19 14:30 input.tar.gz
[2026-03-19 15:53:24] -rw-r--r--. 1 boinc boinc         0 Mar 19 14:30 boinc_lockfile
[2026-03-19 15:53:24] -rw-r--r--. 1 boinc boinc      2597 Mar 19 14:30 pandaJob.out
[2026-03-19 15:53:24] -rw-------. 1 boinc boinc   1010732 Mar 19 14:30 agis_schedconf.cvmfs.json
[2026-03-19 15:53:24] -rw-------. 1 boinc boinc   1511579 Mar 19 14:30 agis_ddmendpoints.agis.ALL.json
[2026-03-19 15:53:24] -rw-------. 1 boinc boinc       442 Mar 19 14:30 workernode_map.json
[2026-03-19 15:53:24] drwx------. 5 boinc boinc      4096 Mar 19 14:30 pilot3
[2026-03-19 15:53:24] -rw-------. 1 boinc boinc 253238251 Mar 19 15:52 HITS.49178033._000420.pool.root.1
[2026-03-19 15:53:24] -rw-------. 1 boinc boinc        95 Mar 19 15:52 pilot_heartbeat.json
[2026-03-19 15:53:24] -rw-------. 1 boinc boinc      1027 Mar 19 15:52 memory_monitor_summary.json
[2026-03-19 15:53:24] -rw-r--r--. 1 boinc boinc       529 Mar 19 15:52 boinc_task_state.xml
[2026-03-19 15:53:24] -rw-------. 1 boinc boinc    384407 Mar 19 15:52 log.49178033._000420.job.log.tgz.1
[2026-03-19 15:53:24] -rw-------. 1 boinc boinc      6349 Mar 19 15:52 heartbeat.json
[2026-03-19 15:53:24] -rw-r--r--. 1 boinc boinc        27 Mar 19 15:53 wrapper_checkpoint.txt
[2026-03-19 15:53:24] -rw-r--r--. 1 boinc boinc      8192 Mar 19 15:53 boinc_mmap_file
[2026-03-19 15:53:24] -rw-------. 1 boinc boinc       893 Mar 19 15:53 pilotlog.txt
[2026-03-19 15:53:24] -rw-------. 1 boinc boinc    727494 Mar 19 15:53 log.49178033._000420.job.log.1
[2026-03-19 15:53:24] -rw-------. 1 boinc boinc       357 Mar 19 15:53 output.list
[2026-03-19 15:53:24] -rw-r--r--. 1 boinc boinc       620 Mar 19 15:53 runtime_log
[2026-03-19 15:53:24] -rw-------. 1 boinc boinc   1126400 Mar 19 15:53 result.tar.gz
[2026-03-19 15:53:24] -rw-r--r--. 1 boinc boinc      9223 Mar 19 15:53 runtime_log.err
[2026-03-19 15:53:24] -rw-------. 1 boinc boinc       663 Mar 19 15:53 0VuLDmf05M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmWDzLDmcjf2Jn.diag
[2026-03-19 15:53:24] -rw-r--r--. 1 boinc boinc     21677 Mar 19 15:53 stderr.txt
[2026-03-19 15:53:24] HITS file was successfully produced:
[2026-03-19 15:53:24] -rw-------. 1 boinc boinc 253238251 Mar 19 15:52 shared/HITS.pool.root.1
[2026-03-19 15:53:24]  *** Contents of shared directory: ***
[2026-03-19 15:53:24] total 491292
[2026-03-19 15:53:24] -rw-r--r--. 2 boinc boinc 248097955 Mar 19 14:30 ATLAS.root_0
[2026-03-19 15:53:24] -rw-r--r--. 2 boinc boinc     15845 Mar 19 14:30 start_atlas.sh
[2026-03-19 15:53:24] -rw-r--r--. 2 boinc boinc    597540 Mar 19 14:30 input.tar.gz
[2026-03-19 15:53:24] -rw-------. 1 boinc boinc 253238251 Mar 19 15:52 HITS.pool.root.1
[2026-03-19 15:53:24] -rw-------. 1 boinc boinc   1126400 Mar 19 15:53 result.tar.gz
15:53:25 (4085866): run_atlas exited; CPU time 55291.038043
15:53:25 (4085866): called boinc_finish(0)

</stderr_txt>
]]>

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