Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:42:16 (24117): wrapper (7.7.26015): starting
16:42:16 (24117): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 16:42:16] Arguments: --nthreads 8
[2026-03-18 16:42:16] Threads: 8
[2026-03-18 16:42:16] Checking for CVMFS
[2026-03-18 16:42:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 16:42:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 16:42:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 16:42:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 16:42:16] 2.11.0.0 6016 20298 68584 157422 2 188 3881083 4096001 5493 130560 1 4097729 99.823 1312434 276 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-18 16:42:16] CVMFS is ok
[2026-03-18 16:42:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 16:42:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 16:42:16] Further information can be found at the LHC@home message board.
[2026-03-18 16:42:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 16:42:16] Checking for apptainer binary...
[2026-03-18 16:42:16] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-18 16:42:16] apptainer is not installed, using version from CVMFS
[2026-03-18 16:42:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 16:42:16] WARNING: Environment variable TMPDIR already has value [/tmp/job_11339342/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node027
[2026-03-18 16:42:16] apptainer works
[2026-03-18 16:42:16] Set ATHENA_PROC_NUMBER=8
[2026-03-18 16:42:16] Set ATHENA_CORE_NUMBER=8
[2026-03-18 16:42:16] Starting ATLAS job with PandaID=7035863566
[2026-03-18 16:42:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11339342/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 17:36:54]  *** The last 200 lines of the pilot log: ***
[2026-03-18 17:36:54]  direct_access_lan=False
[2026-03-18 17:36:54]  direct_access_wan=False
[2026-03-18 17:36:54]  domain=
[2026-03-18 17:36:54]  filesize=293362
[2026-03-18 17:36:54]  filetype=log
[2026-03-18 17:36:54]  guid=cf81ed3a-5fd3-486b-8f6d-edd9b032ebe5
[2026-03-18 17:36:54]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-18 17:36:54]  is_altstaged=None
[2026-03-18 17:36:54]  is_tar=False
[2026-03-18 17:36:54]  lfn=log.48838521._002168.job.log.tgz.1
[2026-03-18 17:36:54]  mtime=0
[2026-03-18 17:36:54]  protocol_id=None
[2026-03-18 17:36:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-18 17:36:54]  replicas=None
[2026-03-18 17:36:54]  scope=mc23_13p6TeV
[2026-03-18 17:36:54]  status=None
[2026-03-18 17:36:54]  status_code=0
[2026-03-18 17:36:54]  storage_token=
[2026-03-18 17:36:54]  surl=/tmp/job_11339342/atlas/pilot/slots/0/PanDA_Pilot-7035863566/log.48838521._002168.job.log.tgz.1
[2026-03-18 17:36:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/c8/log.48838521._002168.job.log.tgz.1
[2026-03-18 17:36:54]  workdir=None
[2026-03-18 17:36:54] ]
[2026-03-18 17:36:54] 2026-03-18 16:36:21,871 | INFO     | transferring file log.48838521._002168.job.log.tgz.1 from /tmp/job_11339342/atlas/pilot/slots/0/PanDA_Pilot-7035863566/log.48838521._002168.job.log.tgz.1 to /tmp/j
[2026-03-18 17:36:54] 2026-03-18 16:36:21,871 | INFO     | executing command: /usr/bin/env mv /tmp/job_11339342/atlas/pilot/slots/0/PanDA_Pilot-7035863566/log.48838521._002168.job.log.tgz.1 /tmp/job_11339342/atlas/pilot/sl
[2026-03-18 17:36:54] 2026-03-18 16:36:21,879 | INFO     | adding to output.list: log.48838521._002168.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/c8/log.48838521._002168.job.log.tg
[2026-03-18 17:36:54] 2026-03-18 16:36:21,879 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-18 17:36:54] 2026-03-18 16:36:21,879 | INFO     | summary of transferred files:
[2026-03-18 17:36:54] 2026-03-18 16:36:21,879 | INFO     |  -- lfn=log.48838521._002168.job.log.tgz.1, status_code=0, status=transferred
[2026-03-18 17:36:54] 2026-03-18 16:36:21,879 | INFO     | stage-out finished correctly
[2026-03-18 17:36:54] 2026-03-18 16:36:22,223 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-18 17:36:54] 2026-03-18 16:36:22,269 | INFO     | job 7035863566 has state=finished
[2026-03-18 17:36:54] 2026-03-18 16:36:22,269 | INFO     | preparing for final server update for job 7035863566 in state='finished'
[2026-03-18 17:36:54] 2026-03-18 16:36:22,269 | INFO     | reading metadata from: /tmp/job_11339342/atlas/pilot/slots/0/PanDA_Pilot-7035863566/jobReport.json
[2026-03-18 17:36:54] 2026-03-18 16:36:22,270 | INFO     | added worker_node to metadata from /tmp/job_11339342/atlas/pilot/slots/0/workernode_map.json
[2026-03-18 17:36:54] 2026-03-18 16:36:22,271 | INFO     | this job has now completed (state=finished)
[2026-03-18 17:36:54] 2026-03-18 16:36:22,271 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 17:36:54] 2026-03-18 16:36:22,271 | INFO     | log transfer has been attempted: DONE
[2026-03-18 17:36:54] 2026-03-18 16:36:22,271 | INFO     | job 7035863566 has finished - writing final server update
[2026-03-18 17:36:54] 2026-03-18 16:36:22,271 | INFO     | total number of processed events: 400 (read)
[2026-03-18 17:36:54] 2026-03-18 16:36:22,289 | INFO     | using path: /tmp/job_11339342/atlas/pilot/slots/0/PanDA_Pilot-7035863566/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 17:36:54] 2026-03-18 16:36:22,289 | INFO     | extracted standard info from prmon json
[2026-03-18 17:36:54] 2026-03-18 16:36:22,289 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 17:36:54] 2026-03-18 16:36:22,289 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 17:36:54] 2026-03-18 16:36:22,290 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 17:36:54] 2026-03-18 16:36:22,290 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 17:36:54] 2026-03-18 16:36:22,290 | INFO     | fitting pss+swap vs Time
[2026-03-18 17:36:54] 2026-03-18 16:36:22,290 | INFO     | sum of square deviations: 30168007.5
[2026-03-18 17:36:54] 2026-03-18 16:36:22,290 | INFO     | sum of deviations: -2461950453.5
[2026-03-18 17:36:54] 2026-03-18 16:36:22,290 | INFO     | mean x: 1773850237.5
[2026-03-18 17:36:54] 2026-03-18 16:36:22,290 | INFO     | mean y: 2642083.586956522
[2026-03-18 17:36:54] 2026-03-18 16:36:22,291 | INFO     | intersect: 144762994475.2458
[2026-03-18 17:36:54] 2026-03-18 16:36:22,291 | INFO     | chi2: 0.007778975297423812
[2026-03-18 17:36:54] 2026-03-18 16:36:22,291 | INFO     | current memory leak: -81.61 B/s (using 46 data points, chi2=0.01)
[2026-03-18 17:36:54] 2026-03-18 16:36:22,291 | INFO     | could have reported an average CPU frequency of 3005 MHz (5 samples)
[2026-03-18 17:36:54] 2026-03-18 16:36:22,291 | INFO     | ..............................
[2026-03-18 17:36:54] 2026-03-18 16:36:22,291 | INFO     | . Timing measurements:
[2026-03-18 17:36:54] 2026-03-18 16:36:22,291 | INFO     | . get job = 0 s
[2026-03-18 17:36:54] 2026-03-18 16:36:22,291 | INFO     | . initial setup = 2 s
[2026-03-18 17:36:54] 2026-03-18 16:36:22,291 | INFO     | . payload setup = 3 s
[2026-03-18 17:36:54] 2026-03-18 16:36:22,291 | INFO     | . stage-in = 0 s
[2026-03-18 17:36:54] 2026-03-18 16:36:22,291 | INFO     | . payload execution = 3220 s
[2026-03-18 17:36:54] 2026-03-18 16:36:22,291 | INFO     | . stage-out = 0 s
[2026-03-18 17:36:54] 2026-03-18 16:36:22,291 | INFO     | . log creation = 0 s
[2026-03-18 17:36:54] 2026-03-18 16:36:22,291 | INFO     | ..............................
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | 
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | job summary report
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | --------------------------------------------------
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | PanDA job id: 7035863566
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | task id: 48838521
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | errors: (none)
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | pilot state: finished 
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | transexitcode: 0
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | exeerrorcode: 0
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | exeerrordiag: 
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | exitcode: 0
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | exitmsg: OK
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | cpuconsumptiontime: 23594 s
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | nevents: 400
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | neventsw: 0
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | pid: 2352
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | pgrp: 2352
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | corecount: 8
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | event service: False
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | sizes: {0: 2279817, 1: 2280389, 11: 2280389, 3227: 2305993, 3228: 2315247}
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | --------------------------------------------------
[2026-03-18 17:36:54] 2026-03-18 16:36:22,338 | INFO     | 
[2026-03-18 17:36:54] 2026-03-18 16:36:22,339 | INFO     | executing command: ls -lF /tmp/job_11339342/atlas/pilot/slots/0
[2026-03-18 17:36:54] 2026-03-18 16:36:22,348 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,348 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,348 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,348 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,348 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,348 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,348 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,348 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,348 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,348 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,348 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,348 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,349 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,349 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,349 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,349 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,349 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 17:36:54] 2026-03-18 16:36:22,349 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,349 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 17:36:54] 2026-03-18 16:36:22,349 | INFO     | job 7035863566 has completed (purged errors)
[2026-03-18 17:36:54] 2026-03-18 16:36:22,349 | INFO     | overall cleanup function is called
[2026-03-18 17:36:54] 2026-03-18 16:36:23,355 | INFO     | --- collectZombieJob: --- 10, [2352]
[2026-03-18 17:36:54] 2026-03-18 16:36:23,355 | INFO     | zombie collector waiting for pid 2352
[2026-03-18 17:36:54] 2026-03-18 16:36:23,355 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 17:36:54] 2026-03-18 16:36:23,355 | INFO     | collected zombie processes
[2026-03-18 17:36:54] 2026-03-18 16:36:23,355 | INFO     | will attempt to kill all subprocesses of pid=2352
[2026-03-18 17:36:54] 2026-03-18 16:36:23,462 | INFO     | process IDs to be killed: [2352] (in reverse order)
[2026-03-18 17:36:54] 2026-03-18 16:36:23,502 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 17:36:54] 2026-03-18 16:36:23,502 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 17:36:54] 2026-03-18 16:36:23,505 | INFO     | did not find any defunct processes belonging to 2352
[2026-03-18 17:36:54] 2026-03-18 16:36:23,509 | INFO     | did not find any defunct processes belonging to 2352
[2026-03-18 17:36:54] 2026-03-18 16:36:23,509 | INFO     | ready for new job
[2026-03-18 17:36:54] 2026-03-18 16:36:23,509 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 17:36:54] 2026-03-18 16:36:23,509 | INFO     | **************************************
[2026-03-18 17:36:54] 2026-03-18 16:36:23,509 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-18 17:36:54] 2026-03-18 16:36:23,510 | INFO     | **************************************
[2026-03-18 17:36:54] 2026-03-18 16:36:23,510 | INFO     | 
[2026-03-18 17:36:54] 2026-03-18 16:36:23,524 | INFO     | architecture information:
[2026-03-18 17:36:54] 2026-03-18 16:36:23,524 | INFO     | executing command: cat /etc/os-release
[2026-03-18 17:36:54] 2026-03-18 16:36:23,530 | INFO     | cat /etc/os-release:
[2026-03-18 17:36:54] NAME="CentOS Linux"
[2026-03-18 17:36:54] VERSION="7 (Core)"
[2026-03-18 17:36:54] ID="centos"
[2026-03-18 17:36:54] ID_LIKE="rhel fedora"
[2026-03-18 17:36:54] VERSION_ID="7"
[2026-03-18 17:36:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 17:36:54] ANSI_COLOR="0;31"
[2026-03-18 17:36:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 17:36:54] HOME_URL="https://www.centos.org/"
[2026-03-18 17:36:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 17:36:54] 
[2026-03-18 17:36:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 17:36:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 17:36:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 17:36:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 17:36:54] 
[2026-03-18 17:36:54] 2026-03-18 16:36:23,530 | INFO     | **************************************
[2026-03-18 17:36:54] 2026-03-18 16:36:24,033 | INFO     | executing command: df -mP /tmp/job_11339342/atlas/pilot/slots/0
[2026-03-18 17:36:54] 2026-03-18 16:36:24,039 | INFO     | sufficient remaining disk space (223258607616 B)
[2026-03-18 17:36:54] 2026-03-18 16:36:24,039 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 17:36:54] 2026-03-18 16:36:24,040 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 17:36:54] 2026-03-18 16:36:24,040 | INFO     | update_server=False
[2026-03-18 17:36:54] 2026-03-18 16:36:24,040 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 17:36:54] 2026-03-18 16:36:24,040 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 17:36:54] 2026-03-18 16:36:24,040 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 17:36:54] 2026-03-18 16:36:24,652 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 17:36:54] 2026-03-18 16:36:24,652 | INFO     | aborting loop
[2026-03-18 17:36:54] 2026-03-18 16:36:24,931 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 17:36:54] 2026-03-18 16:36:24,944 | INFO     | all data control threads have been joined
[2026-03-18 17:36:54] 2026-03-18 16:36:25,014 | INFO     | job.realtimelogging is not enabled
[2026-03-18 17:36:54] 2026-03-18 16:36:25,045 | INFO     | [job] retrieve thread has finished
[2026-03-18 17:36:54] 2026-03-18 16:36:25,045 | INFO     | [job] queue monitor thread has finished
[2026-03-18 17:36:54] 2026-03-18 16:36:25,188 | INFO     | all payload control threads have been joined
[2026-03-18 17:36:54] 2026-03-18 16:36:25,253 | INFO     | all job control threads have been joined
[2026-03-18 17:36:54] 2026-03-18 16:36:25,283 | INFO     | [payload] validate_post thread has finished
[2026-03-18 17:36:54] 2026-03-18 16:36:25,288 | INFO     | [data] copytool_in thread has finished
[2026-03-18 17:36:54] 2026-03-18 16:36:25,461 | INFO     | [payload] failed_post thread has finished
[2026-03-18 17:36:54] 2026-03-18 16:36:25,657 | INFO     | [job] job monitor thread has finished
[2026-03-18 17:36:54] 2026-03-18 16:36:25,949 | INFO     | [data] control thread has finished
[2026-03-18 17:36:54] 2026-03-18 16:36:26,019 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 17:36:54] 2026-03-18 16:36:26,194 | INFO     | [payload] control thread has finished
[2026-03-18 17:36:54] 2026-03-18 16:36:26,259 | INFO     | [job] control thread has finished
[2026-03-18 17:36:54] 2026-03-18 16:36:26,371 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 17:36:54] 2026-03-18 16:36:26,475 | INFO     | [job] validate thread has finished
[2026-03-18 17:36:54] 2026-03-18 16:36:26,517 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 17:36:54] 2026-03-18 16:36:26,537 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 17:36:54] 2026-03-18 16:36:26,936 | INFO     | [data] copytool_out thread has finished
[2026-03-18 17:36:54] 2026-03-18 16:36:28,045 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 17:36:54] 2026-03-18 16:36:28,187 | INFO     | [monitor] cgroup control has ended
[2026-03-18 17:36:54] 2026-03-18 16:36:29,264 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-03-18 17:36:54] 2026-03-18 16:36:34,289 | INFO     | all workflow threads have been joined
[2026-03-18 17:36:54] 2026-03-18 16:36:34,289 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 17:36:54] 2026-03-18 16:36:34,289 | INFO     | traces error code: 0
[2026-03-18 17:36:54] 2026-03-18 16:36:34,289 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 17:36:54] 2026-03-18 16:36:54,267 | INFO     | PID=28809 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 17:36:54] 2026-03-18 16:36:54,267 | INFO     | .. there are 5 such processes running
[2026-03-18 17:36:54] 2026-03-18 16:36:54,268 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 17:36:54] 2026-03-18 16:36:54,268 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 17:36:54] 2026-03-18 16:36:54,268 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 17:36:54] 2026-03-18 16:36:54,268 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 17:36:54] 2026-03-18 16:36:54,268 | INFO     | [monitor] control thread has ended
[2026-03-18 17:36:54] 2026-03-18 16:36:54,318 [wrapper] ==== pilot stdout END ====
[2026-03-18 17:36:54] 2026-03-18 16:36:54,319 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 17:36:54] 2026-03-18 16:36:54,320 [wrapper] pilotpid: 28809
[2026-03-18 17:36:54] 2026-03-18 16:36:54,321 [wrapper] Pilot exit status: 0
[2026-03-18 17:36:54] 2026-03-18 16:36:54,325 [wrapper] pandaids: 7035863566
[2026-03-18 17:36:54] 2026-03-18 16:36:54,349 [wrapper] cleanup supervisor_pilot  2112 28810
[2026-03-18 17:36:54] 2026-03-18 16:36:54,350 [wrapper] Test setup, not cleaning
[2026-03-18 17:36:54] 2026-03-18 16:36:54,352 [wrapper] apfmon messages muted
[2026-03-18 17:36:54] 2026-03-18 16:36:54,353 [wrapper] ==== wrapper stdout END ====
[2026-03-18 17:36:54] 2026-03-18 16:36:54,354 [wrapper] ==== wrapper stderr END ====
[2026-03-18 17:36:54]  *** Error codes and diagnostics ***
[2026-03-18 17:36:54]     "exeErrorCode": 0,
[2026-03-18 17:36:54]     "exeErrorDiag": "",
[2026-03-18 17:36:54]     "pilotErrorCode": 0,
[2026-03-18 17:36:54]     "pilotErrorDiag": "",
[2026-03-18 17:36:54]  *** Listing of results directory ***
[2026-03-18 17:36:54] total 473304
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user    584627 Mar  2 08:34 pilot3.tar.gz
[2026-03-18 17:36:54] -rwx------ 1 mf493845 unix-user     36322 Mar  2 08:34 runpilot2-wrapper.sh
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user      5111 Mar  2 08:35 queuedata.json
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user       100 Mar 18 15:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 17:36:54] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 18 15:33 run_atlas
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user       105 Mar 18 15:33 job.xml
[2026-03-18 17:36:54] -rw-r--r-- 2 mf493845 unix-user 270170395 Mar 18 16:42 EVNT.48343683._000087.pool.root.1
[2026-03-18 17:36:54] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 18 16:42 start_atlas.sh
[2026-03-18 17:36:54] drwxrwx--x 2 mf493845 unix-user       100 Mar 18 16:42 shared
[2026-03-18 17:36:54] -rw-r--r-- 2 mf493845 unix-user    597961 Mar 18 16:42 input.tar.gz
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user      6390 Mar 18 16:42 init_data.xml
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user         0 Mar 18 16:42 boinc_setup_complete
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user      8192 Mar 18 16:42 boinc_mmap_file
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user         0 Mar 18 16:42 boinc_lockfile
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user      2563 Mar 18 16:42 pandaJob.out
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user   1011286 Mar 18 16:42 agis_schedconf.cvmfs.json
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user   1511579 Mar 18 16:42 agis_ddmendpoints.agis.ALL.json
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user       420 Mar 18 16:42 workernode_map.json
[2026-03-18 17:36:54] drwx------ 5 mf493845 unix-user       440 Mar 18 16:42 pilot3
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user 208979347 Mar 18 17:35 HITS.48838521._002168.pool.root.1
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user        95 Mar 18 17:36 pilot_heartbeat.json
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user      1017 Mar 18 17:36 memory_monitor_summary.json
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user    293362 Mar 18 17:36 log.48838521._002168.job.log.tgz.1
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user      6312 Mar 18 17:36 heartbeat.json
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user       820 Mar 18 17:36 pilotlog.txt
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user    508728 Mar 18 17:36 log.48838521._002168.job.log.1
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user       357 Mar 18 17:36 output.list
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user       620 Mar 18 17:36 runtime_log
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user    819200 Mar 18 17:36 result.tar.gz
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user      9219 Mar 18 17:36 runtime_log.err
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user       641 Mar 18 17:36 ELZMDmayCH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm0rCLDm5QqUBn.diag
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user     21410 Mar 18 17:36 stderr.txt
[2026-03-18 17:36:54] HITS file was successfully produced:
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user 208979347 Mar 18 17:35 shared/HITS.pool.root.1
[2026-03-18 17:36:54]  *** Contents of shared directory: ***
[2026-03-18 17:36:54] total 469324
[2026-03-18 17:36:54] -rw-r--r-- 2 mf493845 unix-user 270170395 Mar 18 16:42 ATLAS.root_0
[2026-03-18 17:36:54] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 18 16:42 start_atlas.sh
[2026-03-18 17:36:54] -rw-r--r-- 2 mf493845 unix-user    597961 Mar 18 16:42 input.tar.gz
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user 208979347 Mar 18 17:35 HITS.pool.root.1
[2026-03-18 17:36:54] -rw------- 1 mf493845 unix-user    819200 Mar 18 17:36 result.tar.gz
17:36:56 (24117): run_atlas exited; CPU time 23639.157352
17:36:56 (24117): called boinc_finish(0)

</stderr_txt>
]]>

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