Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:11:29 (19743): wrapper (7.7.26015): starting
09:11:29 (19743): wrapper: running run_atlas (--nthreads 12)
[2026-03-18 09:11:29] Arguments: --nthreads 12
[2026-03-18 09:11:29] Threads: 12
[2026-03-18 09:11:29] Checking for CVMFS
[2026-03-18 09:11:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 09:11:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 09:11:29] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 09:11:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 09:11:30] 2.11.2.0 2914 449005 95100 157415 0 49 18474536 20275201 1 130560 1 195090552 99.953 25570358 17157 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-18 09:11:30] CVMFS is ok
[2026-03-18 09:11:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 09:11:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 09:11:30] Further information can be found at the LHC@home message board.
[2026-03-18 09:11:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 09:11:30] Checking for apptainer binary...
[2026-03-18 09:11:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 09:11:30] Running /usr/bin/apptainer --version
[2026-03-18 09:11:30] apptainer version 1.3.2-1.el7
[2026-03-18 09:11:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 09:11:31] c-205-5.aglt2.org
[2026-03-18 09:11:31] apptainer works
[2026-03-18 09:11:31] Set ATHENA_PROC_NUMBER=12
[2026-03-18 09:11:31] Set ATHENA_CORE_NUMBER=12
[2026-03-18 09:11:31] Starting ATLAS job with PandaID=7055957108
[2026-03-18 09:11:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:12:57 (10813): wrapper (7.7.26015): starting
16:12:57 (10813): wrapper: running run_atlas (--nthreads 12)
[2026-03-18 16:12:57] Arguments: --nthreads 12
[2026-03-18 16:12:57] Threads: 12
[2026-03-18 16:12:57] This job has been restarted, cleaning up previous attempt
[2026-03-18 16:12:57] Checking for CVMFS
[2026-03-18 16:12:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 16:12:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 16:12:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 16:12:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 16:12:58] 2.11.2.0 2914 449427 97044 157428 3 49 19194352 20275200 1 130560 1 195191375 99.953 25586442 17163 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-18 16:12:58] CVMFS is ok
[2026-03-18 16:12:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 16:12:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 16:12:58] Further information can be found at the LHC@home message board.
[2026-03-18 16:12:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 16:12:58] Checking for apptainer binary...
[2026-03-18 16:12:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 16:12:58] Running /usr/bin/apptainer --version
[2026-03-18 16:12:58] apptainer version 1.3.2-1.el7
[2026-03-18 16:12:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 16:12:59] c-205-5.aglt2.org
[2026-03-18 16:12:59] apptainer works
[2026-03-18 16:12:59] Set ATHENA_PROC_NUMBER=12
[2026-03-18 16:12:59] Set ATHENA_CORE_NUMBER=12
[2026-03-18 16:12:59] Starting ATLAS job with PandaID=7055957108
[2026-03-18 16:12:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 11:52:19]  *** The last 200 lines of the pilot log: ***
[2026-03-19 11:52:19] 2026-03-19 15:51:42,550 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7055957108/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 11:52:19] 2026-03-19 15:51:42,550 | INFO     | extracted standard info from prmon json
[2026-03-19 11:52:19] 2026-03-19 15:51:42,550 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 11:52:19] 2026-03-19 15:51:42,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 11:52:19] 2026-03-19 15:51:42,567 | INFO     | fitting pss+swap vs Time
[2026-03-19 11:52:19] 2026-03-19 15:51:42,569 | INFO     | sum of square deviations: 482759176710.05145
[2026-03-19 11:52:19] 2026-03-19 15:51:42,594 | INFO     | sum of deviations: 3186383517375.8867
[2026-03-19 11:52:19] 2026-03-19 15:51:42,594 | INFO     | mean x: 1773900152.3149266
[2026-03-19 11:52:19] 2026-03-19 15:51:42,594 | INFO     | mean y: 3613010.72907679
[2026-03-19 11:52:19] 2026-03-19 15:51:42,595 | INFO     | intersect: -11704763503.885962
[2026-03-19 11:52:19] 2026-03-19 15:51:42,596 | INFO     | chi2: 8.811975752081988
[2026-03-19 11:52:19] 2026-03-19 15:51:42,597 | INFO     | sum of square deviations: 476538269067.0537
[2026-03-19 11:52:19] 2026-03-19 15:51:42,623 | INFO     | sum of deviations: 3708401009047.277
[2026-03-19 11:52:19] 2026-03-19 15:51:42,623 | INFO     | mean x: 1773899999.816291
[2026-03-19 11:52:19] 2026-03-19 15:51:42,623 | INFO     | mean y: 3625806.7088388214
[2026-03-19 11:52:19] 2026-03-19 15:51:42,623 | INFO     | intersect: -13800790283.831963
[2026-03-19 11:52:19] 2026-03-19 15:51:42,624 | INFO     | chi2: 5.247126849649983
[2026-03-19 11:52:19] 2026-03-19 15:51:42,624 | INFO     | current chi2=5.247126849649983 (change=40.454592735230186 %)
[2026-03-19 11:52:19] 2026-03-19 15:51:42,625 | INFO     | sum of square deviations: 470371036849.0518
[2026-03-19 11:52:19] 2026-03-19 15:51:42,651 | INFO     | sum of deviations: 4070273157235.752
[2026-03-19 11:52:19] 2026-03-19 15:51:42,651 | INFO     | mean x: 1773899847.3176675
[2026-03-19 11:52:19] 2026-03-19 15:51:42,651 | INFO     | mean y: 3634750.115752829
[2026-03-19 11:52:19] 2026-03-19 15:51:42,651 | INFO     | intersect: -15346496032.870308
[2026-03-19 11:52:19] 2026-03-19 15:51:42,652 | INFO     | chi2: 3.326437611575902
[2026-03-19 11:52:19] 2026-03-19 15:51:42,652 | INFO     | current chi2=3.326437611575902 (change=36.604589389757244 %)
[2026-03-19 11:52:19] 2026-03-19 15:51:42,653 | INFO     | sum of square deviations: 464257177648.1816
[2026-03-19 11:52:19] 2026-03-19 15:51:42,678 | INFO     | sum of deviations: 4112332948673.5444
[2026-03-19 11:52:19] 2026-03-19 15:51:42,678 | INFO     | mean x: 1773899694.8181818
[2026-03-19 11:52:19] 2026-03-19 15:51:42,679 | INFO     | mean y: 3635795.0795454546
[2026-03-19 11:52:19] 2026-03-19 15:51:42,679 | INFO     | intersect: -15709349407.641157
[2026-03-19 11:52:19] 2026-03-19 15:51:42,680 | INFO     | chi2: 3.177800020593821
[2026-03-19 11:52:19] 2026-03-19 15:51:42,680 | INFO     | current chi2=3.177800020593821 (change=4.468371523482859 %)
[2026-03-19 11:52:19] 2026-03-19 15:51:42,680 | INFO     | right removable region: 1143
[2026-03-19 11:52:19] 2026-03-19 15:51:42,681 | INFO     | sum of square deviations: 476538046417.0541
[2026-03-19 11:52:19] 2026-03-19 15:51:42,708 | INFO     | sum of deviations: 2745338119065.201
[2026-03-19 11:52:19] 2026-03-19 15:51:42,708 | INFO     | mean x: 1773900304.816291
[2026-03-19 11:52:19] 2026-03-19 15:51:42,708 | INFO     | mean y: 3623813.8830155977
[2026-03-19 11:52:19] 2026-03-19 15:51:42,708 | INFO     | intersect: -10215824901.385946
[2026-03-19 11:52:19] 2026-03-19 15:51:42,709 | INFO     | chi2: 6.285277577334786
[2026-03-19 11:52:19] 2026-03-19 15:51:42,709 | INFO     | current chi2=6.285277577334786 (change=28.673458096502642 %)
[2026-03-19 11:52:19] 2026-03-19 15:51:42,711 | INFO     | sum of square deviations: 470370591549.05145
[2026-03-19 11:52:19] 2026-03-19 15:51:42,736 | INFO     | sum of deviations: 2599552416690.6787
[2026-03-19 11:52:19] 2026-03-19 15:51:42,737 | INFO     | mean x: 1773900457.3176675
[2026-03-19 11:52:19] 2026-03-19 15:51:42,737 | INFO     | mean y: 3627418.000870322
[2026-03-19 11:52:19] 2026-03-19 15:51:42,737 | INFO     | intersect: -9800019543.860605
[2026-03-19 11:52:19] 2026-03-19 15:51:42,738 | INFO     | chi2: 6.131274609813279
[2026-03-19 11:52:19] 2026-03-19 15:51:42,738 | INFO     | current chi2=6.131274609813279 (change=2.4502174426926455 %)
[2026-03-19 11:52:19] 2026-03-19 15:51:42,738 | INFO     | left removable region: 20
[2026-03-19 11:52:19] 2026-03-19 15:51:42,739 | INFO     | sum of square deviations: 439156790528.95294
[2026-03-19 11:52:19] 2026-03-19 15:51:42,763 | INFO     | sum of deviations: 3314049411923.568
[2026-03-19 11:52:19] 2026-03-19 15:51:42,764 | INFO     | mean x: 1773900274.3214605
[2026-03-19 11:52:19] 2026-03-19 15:51:42,764 | INFO     | mean y: 3655701.092609083
[2026-03-19 11:52:19] 2026-03-19 15:51:42,764 | INFO     | intersect: -13382891627.129818
[2026-03-19 11:52:19] 2026-03-19 15:51:42,765 | INFO     | chi2: 0.37587323481224
[2026-03-19 11:52:19] 2026-03-19 15:51:42,765 | INFO     | current memory leak: 7.55 B/s (using 1123 data points, chi2=0.38)
[2026-03-19 11:52:19] 2026-03-19 15:51:42,766 | INFO     | could have reported an average CPU frequency of 1762 MHz (43 samples)
[2026-03-19 11:52:19] 2026-03-19 15:51:42,766 | INFO     | ..............................
[2026-03-19 11:52:19] 2026-03-19 15:51:42,766 | INFO     | . Timing measurements:
[2026-03-19 11:52:19] 2026-03-19 15:51:42,766 | INFO     | . get job = 0 s
[2026-03-19 11:52:19] 2026-03-19 15:51:42,766 | INFO     | . initial setup = 2 s
[2026-03-19 11:52:19] 2026-03-19 15:51:42,766 | INFO     | . payload setup = 18 s
[2026-03-19 11:52:19] 2026-03-19 15:51:42,766 | INFO     | . stage-in = 0 s
[2026-03-19 11:52:19] 2026-03-19 15:51:42,766 | INFO     | . payload execution = 70665 s
[2026-03-19 11:52:19] 2026-03-19 15:51:42,766 | INFO     | . stage-out = 4 s
[2026-03-19 11:52:19] 2026-03-19 15:51:42,767 | INFO     | . log creation = 1 s
[2026-03-19 11:52:19] 2026-03-19 15:51:42,767 | INFO     | ..............................
[2026-03-19 11:52:19] 2026-03-19 15:51:42,845 | INFO     | 
[2026-03-19 11:52:19] 2026-03-19 15:51:42,846 | INFO     | job summary report
[2026-03-19 11:52:19] 2026-03-19 15:51:42,846 | INFO     | --------------------------------------------------
[2026-03-19 11:52:19] 2026-03-19 15:51:42,846 | INFO     | PanDA job id: 7055957108
[2026-03-19 11:52:19] 2026-03-19 15:51:42,846 | INFO     | task id: 49147573
[2026-03-19 11:52:19] 2026-03-19 15:51:42,846 | INFO     | errors: (none)
[2026-03-19 11:52:19] 2026-03-19 15:51:42,847 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 11:52:19] 2026-03-19 15:51:42,847 | INFO     | pilot state: finished 
[2026-03-19 11:52:19] 2026-03-19 15:51:42,847 | INFO     | transexitcode: 0
[2026-03-19 11:52:19] 2026-03-19 15:51:42,847 | INFO     | exeerrorcode: 0
[2026-03-19 11:52:19] 2026-03-19 15:51:42,847 | INFO     | exeerrordiag: 
[2026-03-19 11:52:19] 2026-03-19 15:51:42,847 | INFO     | exitcode: 0
[2026-03-19 11:52:19] 2026-03-19 15:51:42,847 | INFO     | exitmsg: OK
[2026-03-19 11:52:19] 2026-03-19 15:51:42,847 | INFO     | cpuconsumptiontime: 821996 s
[2026-03-19 11:52:19] 2026-03-19 15:51:42,848 | INFO     | nevents: 2050
[2026-03-19 11:52:19] 2026-03-19 15:51:42,848 | INFO     | neventsw: 0
[2026-03-19 11:52:19] 2026-03-19 15:51:42,848 | INFO     | pid: 17316
[2026-03-19 11:52:19] 2026-03-19 15:51:42,848 | INFO     | pgrp: 17316
[2026-03-19 11:52:19] 2026-03-19 15:51:42,848 | INFO     | corecount: 12
[2026-03-19 11:52:19] 2026-03-19 15:51:42,848 | INFO     | event service: False
[2026-03-19 11:52:19] 2026-03-19 15:51:42,848 | INFO     | sizes: {0: 2280475, 1: 2280936, 11: 2280936, 70687: 2341238, 70688: 2341237, 70693: 2350291, 70694: 2350721}
[2026-03-19 11:52:19] 2026-03-19 15:51:42,848 | INFO     | --------------------------------------------------
[2026-03-19 11:52:19] 2026-03-19 15:51:42,848 | INFO     | 
[2026-03-19 11:52:19] 2026-03-19 15:51:42,849 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-19 11:52:19] 2026-03-19 15:51:42,872 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,872 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,872 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,873 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,874 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,874 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,874 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,874 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,874 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,874 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,875 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,875 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,875 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 11:52:19] 2026-03-19 15:51:42,875 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,875 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 11:52:19] 2026-03-19 15:51:42,876 | INFO     | job 7055957108 has completed (purged errors)
[2026-03-19 11:52:19] 2026-03-19 15:51:42,876 | INFO     | overall cleanup function is called
[2026-03-19 11:52:19] 2026-03-19 15:51:43,890 | INFO     | --- collectZombieJob: --- 10, [17316]
[2026-03-19 11:52:19] 2026-03-19 15:51:43,891 | INFO     | zombie collector waiting for pid 17316
[2026-03-19 11:52:19] 2026-03-19 15:51:43,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 11:52:19] 2026-03-19 15:51:43,891 | INFO     | collected zombie processes
[2026-03-19 11:52:19] 2026-03-19 15:51:43,891 | INFO     | will attempt to kill all subprocesses of pid=17316
[2026-03-19 11:52:19] 2026-03-19 15:51:43,984 | INFO     | process IDs to be killed: [17316] (in reverse order)
[2026-03-19 11:52:19] 2026-03-19 15:51:44,040 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 11:52:19] 2026-03-19 15:51:44,040 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 11:52:19] 2026-03-19 15:51:44,044 | INFO     | did not find any defunct processes belonging to 17316
[2026-03-19 11:52:19] 2026-03-19 15:51:44,048 | INFO     | did not find any defunct processes belonging to 17316
[2026-03-19 11:52:19] 2026-03-19 15:51:44,048 | INFO     | ready for new job
[2026-03-19 11:52:19] 2026-03-19 15:51:44,048 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 11:52:19] 2026-03-19 15:51:44,052 | INFO     | **************************************
[2026-03-19 11:52:19] 2026-03-19 15:51:44,052 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 11:52:19] 2026-03-19 15:51:44,052 | INFO     | **************************************
[2026-03-19 11:52:19] 2026-03-19 15:51:44,053 | INFO     | 
[2026-03-19 11:52:19] 2026-03-19 15:51:44,053 | INFO     | architecture information:
[2026-03-19 11:52:19] 2026-03-19 15:51:44,054 | INFO     | executing command: cat /etc/os-release
[2026-03-19 11:52:19] 2026-03-19 15:51:44,071 | INFO     | cat /etc/os-release:
[2026-03-19 11:52:19] NAME="CentOS Linux"
[2026-03-19 11:52:19] VERSION="7 (Core)"
[2026-03-19 11:52:19] ID="centos"
[2026-03-19 11:52:19] ID_LIKE="rhel fedora"
[2026-03-19 11:52:19] VERSION_ID="7"
[2026-03-19 11:52:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 11:52:19] ANSI_COLOR="0;31"
[2026-03-19 11:52:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 11:52:19] HOME_URL="https://www.centos.org/"
[2026-03-19 11:52:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 11:52:19] 
[2026-03-19 11:52:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 11:52:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 11:52:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 11:52:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 11:52:19] 
[2026-03-19 11:52:19] 2026-03-19 15:51:44,071 | INFO     | **************************************
[2026-03-19 11:52:19] 2026-03-19 15:51:44,573 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-19 11:52:19] 2026-03-19 15:51:44,592 | INFO     | sufficient remaining disk space (27200061440 B)
[2026-03-19 11:52:19] 2026-03-19 15:51:44,593 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 11:52:19] 2026-03-19 15:51:44,593 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 11:52:19] 2026-03-19 15:51:44,593 | INFO     | update_server=False
[2026-03-19 11:52:19] 2026-03-19 15:51:44,593 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 11:52:19] 2026-03-19 15:51:44,594 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 11:52:19] 2026-03-19 15:51:44,596 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 11:52:19] 2026-03-19 15:51:44,596 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 11:52:19] 2026-03-19 15:51:44,597 | INFO     | aborting loop
[2026-03-19 11:52:19] 2026-03-19 15:51:44,737 | INFO     | all payload control threads have been joined
[2026-03-19 11:52:19] 2026-03-19 15:51:45,357 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 11:52:19] 2026-03-19 15:51:45,408 | INFO     | all data control threads have been joined
[2026-03-19 11:52:19] 2026-03-19 15:51:45,434 | INFO     | all job control threads have been joined
[2026-03-19 11:52:19] 2026-03-19 15:51:45,594 | INFO     | [job] retrieve thread has finished
[2026-03-19 11:52:19] 2026-03-19 15:51:45,600 | INFO     | [job] job monitor thread has finished
[2026-03-19 11:52:19] 2026-03-19 15:51:45,601 | INFO     | [job] queue monitor thread has finished
[2026-03-19 11:52:19] 2026-03-19 15:51:45,680 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 11:52:19] 2026-03-19 15:51:45,693 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 11:52:19] 2026-03-19 15:51:45,742 | INFO     | [payload] control thread has finished
[2026-03-19 11:52:19] 2026-03-19 15:51:45,904 | INFO     | [data] copytool_in thread has finished
[2026-03-19 11:52:19] 2026-03-19 15:51:46,210 | INFO     | [job] validate thread has finished
[2026-03-19 11:52:19] 2026-03-19 15:51:46,240 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 11:52:19] 2026-03-19 15:51:46,413 | INFO     | [data] control thread has finished
[2026-03-19 11:52:19] 2026-03-19 15:51:46,439 | INFO     | [job] control thread has finished
[2026-03-19 11:52:19] 2026-03-19 15:51:47,047 | INFO     | [payload] failed_post thread has finished
[2026-03-19 11:52:19] 2026-03-19 15:51:47,051 | INFO     | [payload] validate_post thread has finished
[2026-03-19 11:52:19] 2026-03-19 15:51:47,068 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 11:52:19] 2026-03-19 15:51:47,363 | INFO     | [data] copytool_out thread has finished
[2026-03-19 11:52:19] 2026-03-19 15:51:48,603 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 11:52:19] 2026-03-19 15:52:13,750 | INFO     | [monitor] cgroup control has ended
[2026-03-19 11:52:19] 2026-03-19 15:52:14,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675190785856)>', '<ExcThread(monitor, started 139673871574784)>']
[2026-03-19 11:52:19] 2026-03-19 15:52:15,208 | INFO     | PID=14921 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-19 11:52:19] 2026-03-19 15:52:15,208 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 11:52:19] 2026-03-19 15:52:15,208 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 11:52:19] 2026-03-19 15:52:15,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 11:52:19] 2026-03-19 15:52:15,209 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 11:52:19] 2026-03-19 15:52:15,209 | INFO     | [monitor] control thread has ended
[2026-03-19 11:52:19] 2026-03-19 15:52:19,136 | INFO     | all workflow threads have been joined
[2026-03-19 11:52:19] 2026-03-19 15:52:19,136 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 11:52:19] 2026-03-19 15:52:19,141 | INFO     | traces error code: 0
[2026-03-19 11:52:19] 2026-03-19 15:52:19,141 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 11:52:19] 2026-03-19 15:52:19,235 [wrapper] ==== pilot stdout END ====
[2026-03-19 11:52:19] 2026-03-19 15:52:19,239 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 11:52:19] 2026-03-19 15:52:19,244 [wrapper] pilotpid: 14921
[2026-03-19 11:52:19] 2026-03-19 15:52:19,248 [wrapper] Pilot exit status: 0
[2026-03-19 11:52:19] 2026-03-19 15:52:19,263 [wrapper] pandaids: 7055957108 7055957108
[2026-03-19 11:52:19] 2026-03-19 15:52:19,302 [wrapper] cleanup supervisor_pilot 27845 14922
[2026-03-19 11:52:19] 2026-03-19 15:52:19,305 [wrapper] Test setup, not cleaning
[2026-03-19 11:52:19] 2026-03-19 15:52:19,309 [wrapper] apfmon messages muted
[2026-03-19 11:52:19] 2026-03-19 15:52:19,313 [wrapper] ==== wrapper stdout END ====
[2026-03-19 11:52:19] 2026-03-19 15:52:19,317 [wrapper] ==== wrapper stderr END ====
[2026-03-19 11:52:19]  *** Error codes and diagnostics ***
[2026-03-19 11:52:19]     "exeErrorCode": 0,
[2026-03-19 11:52:19]     "exeErrorDiag": "",
[2026-03-19 11:52:19]     "pilotErrorCode": 0,
[2026-03-19 11:52:19]     "pilotErrorDiag": "",
[2026-03-19 11:52:19]  *** Listing of results directory ***
[2026-03-19 11:52:19] total 2486512
[2026-03-19 11:52:19] drwx------ 5 boincer umatlas       4096 Mar 10 12:00 pilot3
[2026-03-19 11:52:19] -rw-r--r-- 1 boincer umatlas     585013 Mar 15 10:32 pilot3.tar.gz
[2026-03-19 11:52:19] -rw-r--r-- 1 boincer umatlas       5111 Mar 15 10:32 queuedata.json
[2026-03-19 11:52:19] -rwx------ 1 boincer umatlas      36322 Mar 15 10:33 runpilot2-wrapper.sh
[2026-03-19 11:52:19] -rw-r--r-- 1 boincer umatlas        100 Mar 18 09:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 11:52:19] -rwxr-xr-x 1 boincer umatlas       7986 Mar 18 09:11 run_atlas
[2026-03-19 11:52:19] -rw-r--r-- 1 boincer umatlas        105 Mar 18 09:11 job.xml
[2026-03-19 11:52:19] -rw-r--r-- 3 boincer umatlas  335464762 Mar 18 09:11 EVNT.49147568._000001.pool.root.1
[2026-03-19 11:52:19] -rw-r--r-- 3 boincer umatlas  335464762 Mar 18 09:11 ATLAS.root_0
[2026-03-19 11:52:19] -rw-r--r-- 2 boincer umatlas      15845 Mar 18 09:11 start_atlas.sh
[2026-03-19 11:52:19] drwxrwx--x 2 boincer umatlas       4096 Mar 18 09:11 shared
[2026-03-19 11:52:19] -rw-r--r-- 2 boincer umatlas     597707 Mar 18 09:11 input.tar.gz
[2026-03-19 11:52:19] -rw-r--r-- 1 boincer umatlas          0 Mar 18 09:11 boinc_lockfile
[2026-03-19 11:52:19] -rw-r--r-- 1 boincer umatlas       2930 Mar 18 16:12 pandaJob.out
[2026-03-19 11:52:19] -rw------- 1 boincer umatlas         57 Mar 18 16:13 setup.sh.local
[2026-03-19 11:52:19] -rw------- 1 boincer umatlas    1010358 Mar 18 16:13 agis_schedconf.cvmfs.json
[2026-03-19 11:52:19] -rw------- 1 boincer umatlas        444 Mar 18 16:13 workernode_map.json
[2026-03-19 11:52:19] -rw-r--r-- 1 boincer umatlas        533 Mar 19 11:38 boinc_task_state.xml
[2026-03-19 11:52:19] -rw-r--r-- 1 boincer umatlas       5955 Mar 19 11:49 init_data.xml
[2026-03-19 11:52:19] -rw------- 1 boincer umatlas 1845641940 Mar 19 11:50 HITS.49147573._000001.pool.root.1
[2026-03-19 11:52:19] -rw------- 1 boincer umatlas       1063 Mar 19 11:51 memory_monitor_summary.json
[2026-03-19 11:52:19] -rw------- 1 boincer umatlas         96 Mar 19 11:51 pilot_heartbeat.json
[2026-03-19 11:52:19] -rw------- 1 boincer umatlas    1511579 Mar 19 11:51 agis_ddmendpoints.agis.ALL.json
[2026-03-19 11:52:19] -rw------- 1 boincer umatlas    3020719 Mar 19 11:51 log.49147573._000001.job.log.tgz.1
[2026-03-19 11:52:19] -rw------- 1 boincer umatlas       7075 Mar 19 11:51 heartbeat.json
[2026-03-19 11:52:19] -rw-r--r-- 1 boincer umatlas       8192 Mar 19 11:51 boinc_mmap_file
[2026-03-19 11:52:19] -rw-r--r-- 1 boincer umatlas         30 Mar 19 11:51 wrapper_checkpoint.txt
[2026-03-19 11:52:19] -rw------- 1 boincer umatlas       4742 Mar 19 11:52 pilotlog.txt
[2026-03-19 11:52:19] -rw------- 1 boincer umatlas    9814052 Mar 19 11:52 log.49147573._000001.job.log.1
[2026-03-19 11:52:19] -rw------- 1 boincer umatlas        353 Mar 19 11:52 output.list
[2026-03-19 11:52:19] -rw-r--r-- 1 boincer umatlas        620 Mar 19 11:52 runtime_log
[2026-03-19 11:52:19] -rw------- 1 boincer umatlas   12851200 Mar 19 11:52 result.tar.gz
[2026-03-19 11:52:19] -rw-r--r-- 1 boincer umatlas       9424 Mar 19 11:52 runtime_log.err
[2026-03-19 11:52:19] -rw------- 1 boincer umatlas        797 Mar 19 11:52 puaNDmph1L9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmpDvLDmYDrLHo.diag
[2026-03-19 11:52:19] -rw-r--r-- 1 boincer umatlas      23184 Mar 19 11:52 stderr.txt
[2026-03-19 11:52:19] HITS file was successfully produced:
[2026-03-19 11:52:19] -rw------- 1 boincer umatlas 1845641940 Mar 19 11:50 shared/HITS.pool.root.1
[2026-03-19 11:52:19]  *** Contents of shared directory: ***
[2026-03-19 11:52:19] total 2143148
[2026-03-19 11:52:19] -rw-r--r-- 3 boincer umatlas  335464762 Mar 18 09:11 ATLAS.root_0
[2026-03-19 11:52:19] -rw-r--r-- 2 boincer umatlas      15845 Mar 18 09:11 start_atlas.sh
[2026-03-19 11:52:19] -rw-r--r-- 2 boincer umatlas     597707 Mar 18 09:11 input.tar.gz
[2026-03-19 11:52:19] -rw------- 1 boincer umatlas 1845641940 Mar 19 11:50 HITS.pool.root.1
[2026-03-19 11:52:19] -rw------- 1 boincer umatlas   12851200 Mar 19 11:52 result.tar.gz
11:52:20 (10813): run_atlas exited; CPU time 808074.655305
11:52:20 (10813): called boinc_finish(0)

</stderr_txt>
]]>

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