Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:58:57 (976619): wrapper (7.7.26015): starting
06:58:57 (976619): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 06:58:57] Arguments: --nthreads 8
[2026-03-18 06:58:57] Threads: 8
[2026-03-18 06:58:57] Checking for CVMFS
[2026-03-18 06:58:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 06:58:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 06:58:58] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 06:58:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 06:58:59] 2.13.3.0 8259 42621 355340 157411 3 1017 38155990 40960001 63117 16776704 0 456138403 99.754 276492854 42041 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-18 06:58:59] CVMFS is ok
[2026-03-18 06:58:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 06:58:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 06:58:59] Further information can be found at the LHC@home message board.
[2026-03-18 06:58:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 06:58:59] Checking for apptainer binary...
[2026-03-18 06:58:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 06:58:59] Running /usr/bin/apptainer --version
[2026-03-18 06:58:59] apptainer version 1.4.5-2.el9
[2026-03-18 06:58:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 06:59:00] c8-7-3.aglt2.org
[2026-03-18 06:59:00] apptainer works
[2026-03-18 06:59:00] Set ATHENA_PROC_NUMBER=8
[2026-03-18 06:59:00] Set ATHENA_CORE_NUMBER=8
[2026-03-18 06:59:00] Starting ATLAS job with PandaID=7042059640
[2026-03-18 06:59:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 09:06:18]  *** The last 200 lines of the pilot log: ***
[2026-03-18 09:06:18]  filesize=329471
[2026-03-18 09:06:18]  filetype=log
[2026-03-18 09:06:18]  guid=3dccd2e2-554c-423a-8b9f-b3b804787ec8
[2026-03-18 09:06:18]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-18 09:06:18]  is_altstaged=None
[2026-03-18 09:06:18]  is_tar=False
[2026-03-18 09:06:18]  lfn=log.48955006._039085.job.log.tgz.1
[2026-03-18 09:06:18]  mtime=0
[2026-03-18 09:06:18]  protocol_id=None
[2026-03-18 09:06:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-18 09:06:18]  replicas=None
[2026-03-18 09:06:18]  scope=mc23_13p6TeV
[2026-03-18 09:06:18]  status=None
[2026-03-18 09:06:18]  status_code=0
[2026-03-18 09:06:18]  storage_token=
[2026-03-18 09:06:18]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7042059640/log.48955006._039085.job.log.tgz.1
[2026-03-18 09:06:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/62/log.48955006._039085.job.log.tgz.1
[2026-03-18 09:06:18]  workdir=None
[2026-03-18 09:06:18] ]
[2026-03-18 09:06:18] 2026-03-18 12:46:27,491 | INFO     | transferring file log.48955006._039085.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7042059640/log.48955006._039085.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-18 09:06:18] 2026-03-18 12:46:27,491 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7042059640/log.48955006._039085.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955006._039085.job
[2026-03-18 09:06:18] 2026-03-18 12:46:27,606 | INFO     | adding to output.list: log.48955006._039085.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/62/log.48955006._039085.job.log.tg
[2026-03-18 09:06:18] 2026-03-18 12:46:27,606 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-18 09:06:18] 2026-03-18 12:46:27,607 | INFO     | summary of transferred files:
[2026-03-18 09:06:18] 2026-03-18 12:46:27,607 | INFO     |  -- lfn=log.48955006._039085.job.log.tgz.1, status_code=0, status=transferred
[2026-03-18 09:06:18] 2026-03-18 12:46:27,607 | INFO     | stage-out finished correctly
[2026-03-18 09:06:18] 2026-03-18 12:46:27,931 | INFO     | monitor loop #416: job 0:7042059640 is in state 'finished'
[2026-03-18 09:06:18] 2026-03-18 12:46:27,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-18 09:06:18] 2026-03-18 12:46:29,974 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-18 09:06:18] 2026-03-18 12:46:30,069 | INFO     | job 7042059640 has state=finished
[2026-03-18 09:06:18] 2026-03-18 12:46:30,070 | INFO     | preparing for final server update for job 7042059640 in state='finished'
[2026-03-18 09:06:18] 2026-03-18 12:46:30,070 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7042059640/jobReport.json
[2026-03-18 09:06:18] 2026-03-18 12:46:30,071 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-18 09:06:18] 2026-03-18 12:46:30,071 | INFO     | this job has now completed (state=finished)
[2026-03-18 09:06:18] 2026-03-18 12:46:30,071 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 09:06:18] 2026-03-18 12:46:30,071 | INFO     | log transfer has been attempted: DONE
[2026-03-18 09:06:18] 2026-03-18 12:46:30,071 | INFO     | job 7042059640 has finished - writing final server update
[2026-03-18 09:06:18] 2026-03-18 12:46:30,072 | INFO     | total number of processed events: 400 (read)
[2026-03-18 09:06:18] 2026-03-18 12:46:30,133 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7042059640/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 09:06:18] 2026-03-18 12:46:30,133 | INFO     | extracted standard info from prmon json
[2026-03-18 09:06:18] 2026-03-18 12:46:30,133 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 09:06:18] 2026-03-18 12:46:30,133 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 09:06:18] 2026-03-18 12:46:30,142 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 09:06:18] 2026-03-18 12:46:30,142 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 09:06:18] 2026-03-18 12:46:30,143 | INFO     | fitting pss+swap vs Time
[2026-03-18 09:06:18] 2026-03-18 12:46:30,143 | INFO     | sum of square deviations: 241422630.9021737
[2026-03-18 09:06:18] 2026-03-18 12:46:30,143 | INFO     | sum of deviations: 8544757104.086959
[2026-03-18 09:06:18] 2026-03-18 12:46:30,143 | INFO     | mean x: 1773835024.5326087
[2026-03-18 09:06:18] 2026-03-18 12:46:30,143 | INFO     | mean y: 2499434.304347826
[2026-03-18 09:06:18] 2026-03-18 12:46:30,143 | INFO     | intersect: -62779474942.79953
[2026-03-18 09:06:18] 2026-03-18 12:46:30,143 | INFO     | chi2: 1.617352948872153
[2026-03-18 09:06:18] 2026-03-18 12:46:30,144 | INFO     | current memory leak: 35.39 B/s (using 92 data points, chi2=1.62)
[2026-03-18 09:06:18] 2026-03-18 12:46:30,144 | INFO     | could have reported an average CPU frequency of 3800 MHz (7 samples)
[2026-03-18 09:06:18] 2026-03-18 12:46:30,144 | INFO     | ..............................
[2026-03-18 09:06:18] 2026-03-18 12:46:30,144 | INFO     | . Timing measurements:
[2026-03-18 09:06:18] 2026-03-18 12:46:30,144 | INFO     | . get job = 0 s
[2026-03-18 09:06:18] 2026-03-18 12:46:30,144 | INFO     | . initial setup = 45 s
[2026-03-18 09:06:18] 2026-03-18 12:46:30,144 | INFO     | . payload setup = 199 s
[2026-03-18 09:06:18] 2026-03-18 12:46:30,144 | INFO     | . stage-in = 0 s
[2026-03-18 09:06:18] 2026-03-18 12:46:30,144 | INFO     | . payload execution = 6072 s
[2026-03-18 09:06:18] 2026-03-18 12:46:30,144 | INFO     | . stage-out = 2 s
[2026-03-18 09:06:18] 2026-03-18 12:46:30,144 | INFO     | . log creation = 0 s
[2026-03-18 09:06:18] 2026-03-18 12:46:30,144 | INFO     | ..............................
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | 
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | job summary report
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | --------------------------------------------------
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | PanDA job id: 7042059640
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | task id: 48955006
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | errors: (none)
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | pilot state: finished 
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | transexitcode: 0
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | exeerrorcode: 0
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | exeerrordiag: 
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | exitcode: 0
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | exitmsg: OK
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | cpuconsumptiontime: 20941 s
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | nevents: 400
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | neventsw: 0
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | pid: 1043582
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | pgrp: 1043582
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | corecount: 8
[2026-03-18 09:06:18] 2026-03-18 12:46:30,607 | INFO     | event service: False
[2026-03-18 09:06:18] 2026-03-18 12:46:30,608 | INFO     | sizes: {0: 2279140, 1: 2279825, 2: 2280080, 3: 2280286, 14: 2280314, 6275: 2307212, 6278: 2316210, 6280: 2316266, 6281: 2316460}
[2026-03-18 09:06:18] 2026-03-18 12:46:30,608 | INFO     | --------------------------------------------------
[2026-03-18 09:06:18] 2026-03-18 12:46:30,608 | INFO     | 
[2026-03-18 09:06:18] 2026-03-18 12:46:30,608 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-18 09:06:18] 2026-03-18 12:46:30,721 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,721 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,721 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,721 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,722 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,722 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,722 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,722 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,722 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,722 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,722 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,722 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,722 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,722 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 09:06:18] 2026-03-18 12:46:30,722 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,722 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 09:06:18] 2026-03-18 12:46:30,722 | INFO     | job 7042059640 has completed (purged errors)
[2026-03-18 09:06:18] 2026-03-18 12:46:30,722 | INFO     | overall cleanup function is called
[2026-03-18 09:06:18] 2026-03-18 12:46:30,895 | INFO     | PID=996527 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 09:06:18] 2026-03-18 12:46:30,895 | INFO     | .. there are 84 such processes running
[2026-03-18 09:06:18] 2026-03-18 12:46:31,737 | INFO     | --- collectZombieJob: --- 10, [1043582]
[2026-03-18 09:06:18] 2026-03-18 12:46:31,737 | INFO     | zombie collector waiting for pid 1043582
[2026-03-18 09:06:18] 2026-03-18 12:46:31,737 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 09:06:18] 2026-03-18 12:46:31,737 | INFO     | collected zombie processes
[2026-03-18 09:06:18] 2026-03-18 12:46:31,737 | INFO     | will attempt to kill all subprocesses of pid=1043582
[2026-03-18 09:06:18] 2026-03-18 12:46:33,361 | INFO     | process IDs to be killed: [1043582] (in reverse order)
[2026-03-18 09:06:18] 2026-03-18 12:46:33,735 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 09:06:18] 2026-03-18 12:46:33,736 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 09:06:18] 2026-03-18 12:46:33,810 | INFO     | did not find any defunct processes belonging to 1043582
[2026-03-18 09:06:18] 2026-03-18 12:46:33,909 | INFO     | did not find any defunct processes belonging to 1043582
[2026-03-18 09:06:18] 2026-03-18 12:46:33,909 | INFO     | ready for new job
[2026-03-18 09:06:18] 2026-03-18 12:46:33,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 09:06:18] 2026-03-18 12:46:33,910 | INFO     | **************************************
[2026-03-18 09:06:18] 2026-03-18 12:46:33,910 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-18 09:06:18] 2026-03-18 12:46:33,934 | INFO     | **************************************
[2026-03-18 09:06:18] 2026-03-18 12:46:33,934 | INFO     | 
[2026-03-18 09:06:18] 2026-03-18 12:46:33,943 | INFO     | architecture information:
[2026-03-18 09:06:18] 2026-03-18 12:46:33,944 | INFO     | executing command: cat /etc/os-release
[2026-03-18 09:06:18] 2026-03-18 12:46:33,988 | INFO     | cat /etc/os-release:
[2026-03-18 09:06:18] NAME="CentOS Linux"
[2026-03-18 09:06:18] VERSION="7 (Core)"
[2026-03-18 09:06:18] ID="centos"
[2026-03-18 09:06:18] ID_LIKE="rhel fedora"
[2026-03-18 09:06:18] VERSION_ID="7"
[2026-03-18 09:06:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 09:06:18] ANSI_COLOR="0;31"
[2026-03-18 09:06:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 09:06:18] HOME_URL="https://www.centos.org/"
[2026-03-18 09:06:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 09:06:18] 
[2026-03-18 09:06:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 09:06:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 09:06:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 09:06:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 09:06:18] 
[2026-03-18 09:06:18] 2026-03-18 12:46:33,988 | INFO     | **************************************
[2026-03-18 09:06:18] 2026-03-18 12:46:34,491 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-18 09:06:18] 2026-03-18 12:46:34,531 | INFO     | sufficient remaining disk space (169494970368 B)
[2026-03-18 09:06:18] 2026-03-18 12:46:34,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 09:06:18] 2026-03-18 12:46:34,531 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 09:06:18] 2026-03-18 12:46:34,531 | INFO     | update_server=False
[2026-03-18 09:06:18] 2026-03-18 12:46:34,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 09:06:18] 2026-03-18 12:46:34,532 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 09:06:18] 2026-03-18 12:46:34,532 | INFO     | aborting loop
[2026-03-18 09:06:18] 2026-03-18 12:46:35,008 | INFO     | all data control threads have been joined
[2026-03-18 09:06:18] 2026-03-18 12:46:35,329 | INFO     | all job control threads have been joined
[2026-03-18 09:06:18] 2026-03-18 12:46:35,538 | INFO     | [job] retrieve thread has finished
[2026-03-18 09:06:18] 2026-03-18 12:46:35,542 | INFO     | [job] job monitor thread has finished
[2026-03-18 09:06:18] 2026-03-18 12:46:35,622 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 09:06:18] 2026-03-18 12:46:35,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 09:06:18] 2026-03-18 12:46:35,932 | INFO     | all payload control threads have been joined
[2026-03-18 09:06:18] 2026-03-18 12:46:35,999 | INFO     | [data] copytool_in thread has finished
[2026-03-18 09:06:18] 2026-03-18 12:46:36,015 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 09:06:18] 2026-03-18 12:46:36,025 | INFO     | [data] control thread has finished
[2026-03-18 09:06:18] 2026-03-18 12:46:36,080 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 09:06:18] 2026-03-18 12:46:36,191 | INFO     | [payload] validate_post thread has finished
[2026-03-18 09:06:18] 2026-03-18 12:46:36,336 | INFO     | [job] control thread has finished
[2026-03-18 09:06:18] 2026-03-18 12:46:36,518 | INFO     | [payload] failed_post thread has finished
[2026-03-18 09:06:18] 2026-03-18 12:46:36,628 | INFO     | [job] queue monitor thread has finished
[2026-03-18 09:06:18] 2026-03-18 12:46:36,710 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 09:06:18] 2026-03-18 12:46:36,771 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 09:06:18] 2026-03-18 12:46:36,823 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 09:06:18] 2026-03-18 12:46:36,939 | INFO     | [payload] control thread has finished
[2026-03-18 09:06:18] 2026-03-18 12:46:37,019 | INFO     | [job] validate thread has finished
[2026-03-18 09:06:18] 2026-03-18 12:46:37,907 | INFO     | [data] copytool_out thread has finished
[2026-03-18 09:06:18] 2026-03-18 12:46:40,098 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 09:06:18] 2026-03-18 12:46:45,959 | INFO     | [monitor] cgroup control has ended
[2026-03-18 09:06:18] 2026-03-18 12:46:47,990 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140702772672320)>', '<ExcThread(monitor, started 140702298130176)>']
[2026-03-18 09:06:18] 2026-03-18 12:46:53,027 | INFO     | all workflow threads have been joined
[2026-03-18 09:06:18] 2026-03-18 12:46:53,028 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 09:06:18] 2026-03-18 12:46:53,028 | INFO     | traces error code: 0
[2026-03-18 09:06:18] 2026-03-18 12:46:53,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 09:06:18] 2026-03-18 12:47:06,428 | INFO     | PID=996527 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-18 09:06:18] 2026-03-18 12:47:06,428 | INFO     | .. there are 84 such processes running
[2026-03-18 09:06:18] 2026-03-18 12:47:06,428 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 09:06:18] 2026-03-18 12:47:06,429 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 09:06:18] 2026-03-18 12:47:06,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 09:06:18] 2026-03-18 12:47:06,429 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 09:06:18] 2026-03-18 12:47:06,429 | INFO     | [monitor] control thread has ended
[2026-03-18 09:06:18] 2026-03-18 12:47:06,675 [wrapper] ==== pilot stdout END ====
[2026-03-18 09:06:18] 2026-03-18 12:47:06,695 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 09:06:18] 2026-03-18 12:47:06,741 [wrapper] pilotpid: 996527
[2026-03-18 09:06:18] 2026-03-18 12:47:06,786 [wrapper] Pilot exit status: 0
[2026-03-18 09:06:18] 2026-03-18 12:47:06,935 [wrapper] pandaids: 7042059640
[2026-03-18 09:06:18] 2026-03-18 12:47:07,471 [wrapper] cleanup supervisor_pilot 1595721 996528
[2026-03-18 09:06:18] 2026-03-18 12:47:07,497 [wrapper] Test setup, not cleaning
[2026-03-18 09:06:18] 2026-03-18 12:47:07,525 [wrapper] apfmon messages muted
[2026-03-18 09:06:18] 2026-03-18 12:47:07,542 [wrapper] ==== wrapper stdout END ====
[2026-03-18 09:06:18] 2026-03-18 12:47:07,576 [wrapper] ==== wrapper stderr END ====
[2026-03-18 09:06:18]  *** Error codes and diagnostics ***
[2026-03-18 09:06:18]     "exeErrorCode": 0,
[2026-03-18 09:06:18]     "exeErrorDiag": "",
[2026-03-18 09:06:18]     "pilotErrorCode": 0,
[2026-03-18 09:06:18]     "pilotErrorDiag": "",
[2026-03-18 09:06:18]  *** Listing of results directory ***
[2026-03-18 09:06:18] total 617284
[2026-03-18 09:06:18] -rw-r--r--. 1 boincer umatlas    584627 Mar 10 00:09 pilot3.tar.gz
[2026-03-18 09:06:18] -rwx------. 1 boincer umatlas     36322 Mar 10 00:47 runpilot2-wrapper.sh
[2026-03-18 09:06:18] -rw-r--r--. 1 boincer umatlas      5111 Mar 10 00:48 queuedata.json
[2026-03-18 09:06:18] -rw-r--r--. 1 boincer umatlas       100 Mar 18 06:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 09:06:18] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 18 06:58 run_atlas
[2026-03-18 09:06:18] -rw-r--r--. 1 boincer umatlas       105 Mar 18 06:58 job.xml
[2026-03-18 09:06:18] -rw-r--r--. 2 boincer umatlas 437694423 Mar 18 06:58 EVNT.46701403._000780.pool.root.1
[2026-03-18 09:06:18] -rw-r--r--. 2 boincer umatlas     15845 Mar 18 06:58 start_atlas.sh
[2026-03-18 09:06:18] drwxrwx--x. 2 boincer umatlas      4096 Mar 18 06:58 shared
[2026-03-18 09:06:18] -rw-r--r--. 2 boincer umatlas    597957 Mar 18 06:58 input.tar.gz
[2026-03-18 09:06:18] -rw-r--r--. 1 boincer umatlas         0 Mar 18 06:58 boinc_lockfile
[2026-03-18 09:06:18] -rw-r--r--. 1 boincer umatlas      2564 Mar 18 06:59 pandaJob.out
[2026-03-18 09:06:18] -rw-------. 1 boincer umatlas        57 Mar 18 06:59 setup.sh.local
[2026-03-18 09:06:18] -rw-------. 1 boincer umatlas   1011573 Mar 18 07:00 agis_schedconf.cvmfs.json
[2026-03-18 09:06:18] -rw-------. 1 boincer umatlas   1511579 Mar 18 07:00 agis_ddmendpoints.agis.ALL.json
[2026-03-18 09:06:18] -rw-------. 1 boincer umatlas       427 Mar 18 07:01 workernode_map.json
[2026-03-18 09:06:18] drwx------. 5 boincer umatlas      4096 Mar 18 07:01 pilot3
[2026-03-18 09:06:18] -rw-------. 1 boincer umatlas 188250221 Mar 18 08:45 HITS.48955006._039085.pool.root.1
[2026-03-18 09:06:18] -rw-r--r--. 1 boincer umatlas       531 Mar 18 08:45 boinc_task_state.xml
[2026-03-18 09:06:18] -rw-------. 1 boincer umatlas        95 Mar 18 08:46 pilot_heartbeat.json
[2026-03-18 09:06:18] -rw-------. 1 boincer umatlas      1033 Mar 18 08:46 memory_monitor_summary.json
[2026-03-18 09:06:18] -rw-------. 1 boincer umatlas    329471 Mar 18 08:46 log.48955006._039085.job.log.tgz.1
[2026-03-18 09:06:18] -rw-------. 1 boincer umatlas      6327 Mar 18 08:46 heartbeat.json
[2026-03-18 09:06:18] -rw-------. 1 boincer umatlas       822 Mar 18 08:47 pilotlog.txt
[2026-03-18 09:06:18] -rw-------. 1 boincer umatlas    778154 Mar 18 08:47 log.48955006._039085.job.log.1
[2026-03-18 09:06:18] -rw-------. 1 boincer umatlas       357 Mar 18 08:47 output.list
[2026-03-18 09:06:18] -rw-r--r--. 1 boincer umatlas       620 Mar 18 08:47 runtime_log
[2026-03-18 09:06:18] -rw-------. 1 boincer umatlas   1126400 Mar 18 08:47 result.tar.gz
[2026-03-18 09:06:18] -rw-------. 1 boincer umatlas       650 Mar 18 08:47 wxyLDmLB4J9n9Rq4apOajLDm4fhM0noT9bVooX4SDmiTcLDmQ3boqn.diag
[2026-03-18 09:06:18] -rw-r--r--. 1 boincer umatlas      9331 Mar 18 08:47 runtime_log.err
[2026-03-18 09:06:18] -rw-r--r--. 1 boincer umatlas      7183 Mar 18 09:00 init_data.xml
[2026-03-18 09:06:18] -rw-r--r--. 1 boincer umatlas        27 Mar 18 09:06 wrapper_checkpoint.txt
[2026-03-18 09:06:18] -rw-r--r--. 1 boincer umatlas      8192 Mar 18 09:06 boinc_mmap_file
[2026-03-18 09:06:18] -rw-r--r--. 1 boincer umatlas     21343 Mar 18 09:06 stderr.txt
[2026-03-18 09:06:19] HITS file was successfully produced:
[2026-03-18 09:06:19] -rw-------. 1 boincer umatlas 188250221 Mar 18 08:45 shared/HITS.pool.root.1
[2026-03-18 09:06:19]  *** Contents of shared directory: ***
[2026-03-18 09:06:19] total 612984
[2026-03-18 09:06:19] -rw-r--r--. 2 boincer umatlas 437694423 Mar 18 06:58 ATLAS.root_0
[2026-03-18 09:06:19] -rw-r--r--. 2 boincer umatlas     15845 Mar 18 06:58 start_atlas.sh
[2026-03-18 09:06:19] -rw-r--r--. 2 boincer umatlas    597957 Mar 18 06:58 input.tar.gz
[2026-03-18 09:06:19] -rw-------. 1 boincer umatlas 188250221 Mar 18 08:45 HITS.pool.root.1
[2026-03-18 09:06:19] -rw-------. 1 boincer umatlas   1126400 Mar 18 08:47 result.tar.gz
09:06:20 (976619): run_atlas exited; CPU time 21199.145294
09:06:20 (976619): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN