Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
06:56:08 (980975): wrapper (7.7.26015): starting
06:56:08 (980975): wrapper: running run_atlas (--nthreads 12)
[2026-03-19 06:56:08] Arguments: --nthreads 12
[2026-03-19 06:56:08] Threads: 12
[2026-03-19 06:56:08] Checking for CVMFS
[2026-03-19 06:56:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 06:56:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 06:56:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 06:56:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 06:56:08] 2.13.3.0 3012 2055 52800 157443 0 188 5580944 6144000 1834 130560 1 3614613 99.995 86520 381 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-19 06:56:08] CVMFS is ok
[2026-03-19 06:56:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 06:56:08] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-19 06:56:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-19 06:56:08] Further information can be found at the LHC@home message board.
[2026-03-19 06:56:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 06:56:08] Checking for apptainer binary...
[2026-03-19 06:56:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 06:56:08] Running /usr/bin/apptainer --version
[2026-03-19 06:56:08] apptainer version 1.4.5
[2026-03-19 06:56:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 06:56:09] casi34-debian
[2026-03-19 06:56:09] apptainer works
[2026-03-19 06:56:09] Set ATHENA_PROC_NUMBER=12
[2026-03-19 06:56:09] Set ATHENA_CORE_NUMBER=12
[2026-03-19 06:56:09] Starting ATLAS job with PandaID=7048425405
[2026-03-19 06:56:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 07:56:37]  *** The last 200 lines of the pilot log: ***
[2026-03-19 07:56:37]  is_altstaged=None
[2026-03-19 07:56:37]  is_tar=False
[2026-03-19 07:56:37]  lfn=log.48997948._001565.job.log.tgz.1
[2026-03-19 07:56:37]  mtime=0
[2026-03-19 07:56:37]  protocol_id=None
[2026-03-19 07:56:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-19 07:56:37]  replicas=None
[2026-03-19 07:56:37]  scope=mc23_13p6TeV
[2026-03-19 07:56:37]  status=None
[2026-03-19 07:56:37]  status_code=0
[2026-03-19 07:56:37]  storage_token=
[2026-03-19 07:56:37]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-7048425405/log.48997948._001565.job.log.tgz.1
[2026-03-19 07:56:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/ac/log.48997948._001565.job.log.tgz.1
[2026-03-19 07:56:37]  workdir=None
[2026-03-19 07:56:37] ]
[2026-03-19 07:56:37] 2026-03-19 06:55:33,733 | INFO     | transferring file log.48997948._001565.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-7048425405/log.48997948._001565.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-03-19 07:56:37] 2026-03-19 06:55:33,733 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-7048425405/log.48997948._001565.job.log.tgz.1 /var/lib/boinc/slots/1/log.48997948._001565.job
[2026-03-19 07:56:37] 2026-03-19 06:55:33,741 | INFO     | adding to output.list: log.48997948._001565.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/ac/log.48997948._001565.job.log.tg
[2026-03-19 07:56:37] 2026-03-19 06:55:33,742 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-19 07:56:37] 2026-03-19 06:55:33,742 | INFO     | summary of transferred files:
[2026-03-19 07:56:37] 2026-03-19 06:55:33,742 | INFO     |  -- lfn=log.48997948._001565.job.log.tgz.1, status_code=0, status=transferred
[2026-03-19 07:56:37] 2026-03-19 06:55:33,742 | INFO     | stage-out finished correctly
[2026-03-19 07:56:37] 2026-03-19 06:55:33,918 | INFO     | monitor loop #275: job 0:7048425405 is in state 'finished'
[2026-03-19 07:56:37] 2026-03-19 06:55:33,919 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-19 07:56:37] 2026-03-19 06:55:34,283 | INFO     | time since job start (3548s) is within the limit (349056.0s)
[2026-03-19 07:56:37] 2026-03-19 06:55:36,286 | INFO     | time since job start (3550s) is within the limit (349056.0s)
[2026-03-19 07:56:37] 2026-03-19 06:55:36,422 | INFO     | monitor loop #276: job 0:7048425405 is in state 'finished'
[2026-03-19 07:56:37] 2026-03-19 06:55:36,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-19 07:56:37] 2026-03-19 06:55:36,655 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-19 07:56:37] 2026-03-19 06:55:37,243 | INFO     | job 7048425405 has state=finished
[2026-03-19 07:56:37] 2026-03-19 06:55:37,243 | INFO     | preparing for final server update for job 7048425405 in state='finished'
[2026-03-19 07:56:37] 2026-03-19 06:55:37,243 | INFO     | reading metadata from: /var/lib/boinc/slots/1/PanDA_Pilot-7048425405/jobReport.json
[2026-03-19 07:56:37] 2026-03-19 06:55:37,244 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/1/workernode_map.json
[2026-03-19 07:56:37] 2026-03-19 06:55:37,244 | INFO     | this job has now completed (state=finished)
[2026-03-19 07:56:37] 2026-03-19 06:55:37,244 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 07:56:37] 2026-03-19 06:55:37,244 | INFO     | log transfer has been attempted: DONE
[2026-03-19 07:56:37] 2026-03-19 06:55:37,244 | INFO     | job 7048425405 has finished - writing final server update
[2026-03-19 07:56:37] 2026-03-19 06:55:37,244 | INFO     | total number of processed events: 400 (read)
[2026-03-19 07:56:37] 2026-03-19 06:55:37,245 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-7048425405/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 07:56:37] 2026-03-19 06:55:37,245 | INFO     | extracted standard info from prmon json
[2026-03-19 07:56:37] 2026-03-19 06:55:37,245 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 07:56:37] 2026-03-19 06:55:37,245 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 07:56:37] 2026-03-19 06:55:37,245 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 07:56:37] 2026-03-19 06:55:37,245 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 07:56:37] 2026-03-19 06:55:37,246 | INFO     | fitting pss+swap vs Time
[2026-03-19 07:56:37] 2026-03-19 06:55:37,246 | INFO     | sum of square deviations: 41117050.0
[2026-03-19 07:56:37] 2026-03-19 06:55:37,246 | INFO     | sum of deviations: -1415855567.0
[2026-03-19 07:56:37] 2026-03-19 06:55:37,246 | INFO     | mean x: 1773901640.0
[2026-03-19 07:56:37] 2026-03-19 06:55:37,246 | INFO     | mean y: 2766560.725490196
[2026-03-19 07:56:37] 2026-03-19 06:55:37,246 | INFO     | intersect: 61086635960.51049
[2026-03-19 07:56:37] 2026-03-19 06:55:37,246 | INFO     | chi2: 0.009966409217355114
[2026-03-19 07:56:37] 2026-03-19 06:55:37,246 | INFO     | current memory leak: -34.43 B/s (using 51 data points, chi2=0.01)
[2026-03-19 07:56:37] 2026-03-19 06:55:37,247 | INFO     | could have reported an average CPU frequency of 4982 MHz (5 samples)
[2026-03-19 07:56:37] 2026-03-19 06:55:37,247 | INFO     | ..............................
[2026-03-19 07:56:37] 2026-03-19 06:55:37,247 | INFO     | . Timing measurements:
[2026-03-19 07:56:37] 2026-03-19 06:55:37,247 | INFO     | . get job = 0 s
[2026-03-19 07:56:37] 2026-03-19 06:55:37,247 | INFO     | . initial setup = 7 s
[2026-03-19 07:56:37] 2026-03-19 06:55:37,247 | INFO     | . payload setup = 7 s
[2026-03-19 07:56:37] 2026-03-19 06:55:37,247 | INFO     | . stage-in = 0 s
[2026-03-19 07:56:37] 2026-03-19 06:55:37,247 | INFO     | . payload execution = 3525 s
[2026-03-19 07:56:37] 2026-03-19 06:55:37,247 | INFO     | . stage-out = 0 s
[2026-03-19 07:56:37] 2026-03-19 06:55:37,247 | INFO     | . log creation = 0 s
[2026-03-19 07:56:37] 2026-03-19 06:55:37,247 | INFO     | ..............................
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | 
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | job summary report
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | --------------------------------------------------
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | PanDA job id: 7048425405
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | task id: 48997948
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | errors: (none)
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | pilot state: finished 
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | transexitcode: 0
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | exeerrorcode: 0
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | exeerrordiag: 
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | exitcode: 0
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | exitmsg: OK
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | cpuconsumptiontime: 18197 s
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | nevents: 400
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | neventsw: 0
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | pid: 989257
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | pgrp: 989257
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | corecount: 12
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | event service: False
[2026-03-19 07:56:37] 2026-03-19 06:55:37,649 | INFO     | sizes: {0: 2280245, 11: 2280245, 3536: 2314994, 3539: 2314994, 3540: 2315220}
[2026-03-19 07:56:37] 2026-03-19 06:55:37,650 | INFO     | --------------------------------------------------
[2026-03-19 07:56:37] 2026-03-19 06:55:37,650 | INFO     | 
[2026-03-19 07:56:37] 2026-03-19 06:55:37,650 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-03-19 07:56:37] 2026-03-19 06:55:37,657 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | job 7048425405 has completed (purged errors)
[2026-03-19 07:56:37] 2026-03-19 06:55:37,658 | INFO     | overall cleanup function is called
[2026-03-19 07:56:37] 2026-03-19 06:55:38,663 | INFO     | --- collectZombieJob: --- 10, [989257]
[2026-03-19 07:56:37] 2026-03-19 06:55:38,664 | INFO     | zombie collector waiting for pid 989257
[2026-03-19 07:56:37] 2026-03-19 06:55:38,664 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 07:56:37] 2026-03-19 06:55:38,664 | INFO     | collected zombie processes
[2026-03-19 07:56:37] 2026-03-19 06:55:38,664 | INFO     | will attempt to kill all subprocesses of pid=989257
[2026-03-19 07:56:37] 2026-03-19 06:55:38,701 | INFO     | process IDs to be killed: [989257] (in reverse order)
[2026-03-19 07:56:37] 2026-03-19 06:55:38,718 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 07:56:37] 2026-03-19 06:55:38,718 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 07:56:37] 2026-03-19 06:55:38,720 | INFO     | did not find any defunct processes belonging to 989257
[2026-03-19 07:56:37] 2026-03-19 06:55:38,721 | INFO     | did not find any defunct processes belonging to 989257
[2026-03-19 07:56:37] 2026-03-19 06:55:38,721 | INFO     | ready for new job
[2026-03-19 07:56:37] 2026-03-19 06:55:38,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 07:56:37] 2026-03-19 06:55:38,722 | INFO     | **************************************
[2026-03-19 07:56:37] 2026-03-19 06:55:38,722 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-19 07:56:37] 2026-03-19 06:55:38,722 | INFO     | **************************************
[2026-03-19 07:56:37] 2026-03-19 06:55:38,722 | INFO     | 
[2026-03-19 07:56:37] 2026-03-19 06:55:38,722 | INFO     | architecture information:
[2026-03-19 07:56:37] 2026-03-19 06:55:38,722 | INFO     | executing command: cat /etc/os-release
[2026-03-19 07:56:37] 2026-03-19 06:55:38,727 | INFO     | cat /etc/os-release:
[2026-03-19 07:56:37] NAME="CentOS Linux"
[2026-03-19 07:56:37] VERSION="7 (Core)"
[2026-03-19 07:56:37] ID="centos"
[2026-03-19 07:56:37] ID_LIKE="rhel fedora"
[2026-03-19 07:56:37] VERSION_ID="7"
[2026-03-19 07:56:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 07:56:37] ANSI_COLOR="0;31"
[2026-03-19 07:56:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 07:56:37] HOME_URL="https://www.centos.org/"
[2026-03-19 07:56:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 07:56:37] 
[2026-03-19 07:56:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 07:56:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 07:56:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 07:56:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 07:56:37] 
[2026-03-19 07:56:37] 2026-03-19 06:55:38,727 | INFO     | **************************************
[2026-03-19 07:56:37] 2026-03-19 06:55:39,230 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-03-19 07:56:37] 2026-03-19 06:55:39,237 | INFO     | sufficient remaining disk space (402118410240 B)
[2026-03-19 07:56:37] 2026-03-19 06:55:39,237 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 07:56:37] 2026-03-19 06:55:39,237 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 07:56:37] 2026-03-19 06:55:39,237 | INFO     | update_server=False
[2026-03-19 07:56:37] 2026-03-19 06:55:39,237 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 07:56:37] 2026-03-19 06:55:39,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 07:56:37] 2026-03-19 06:55:39,281 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 07:56:37] 2026-03-19 06:55:39,291 | INFO     | all data control threads have been joined
[2026-03-19 07:56:37] 2026-03-19 06:55:39,930 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 07:56:37] 2026-03-19 06:55:39,931 | INFO     | aborting loop
[2026-03-19 07:56:37] 2026-03-19 06:55:40,238 | INFO     | [job] retrieve thread has finished
[2026-03-19 07:56:37] 2026-03-19 06:55:40,239 | INFO     | [job] queue monitor thread has finished
[2026-03-19 07:56:37] 2026-03-19 06:55:40,286 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 07:56:37] 2026-03-19 06:55:40,295 | INFO     | [data] control thread has finished
[2026-03-19 07:56:37] 2026-03-19 06:55:40,298 | INFO     | [job] validate thread has finished
[2026-03-19 07:56:37] 2026-03-19 06:55:40,366 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 07:56:37] 2026-03-19 06:55:40,414 | INFO     | all job control threads have been joined
[2026-03-19 07:56:37] 2026-03-19 06:55:40,586 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 07:56:37] 2026-03-19 06:55:40,608 | INFO     | all payload control threads have been joined
[2026-03-19 07:56:37] 2026-03-19 06:55:40,652 | INFO     | [data] copytool_in thread has finished
[2026-03-19 07:56:37] 2026-03-19 06:55:40,795 | INFO     | [payload] validate_post thread has finished
[2026-03-19 07:56:37] 2026-03-19 06:55:40,936 | INFO     | [job] job monitor thread has finished
[2026-03-19 07:56:37] 2026-03-19 06:55:41,290 | INFO     | [data] copytool_out thread has finished
[2026-03-19 07:56:37] 2026-03-19 06:55:41,367 | INFO     | [payload] failed_post thread has finished
[2026-03-19 07:56:37] 2026-03-19 06:55:41,418 | INFO     | [job] control thread has finished
[2026-03-19 07:56:37] 2026-03-19 06:55:41,611 | INFO     | [payload] control thread has finished
[2026-03-19 07:56:37] 2026-03-19 06:55:42,692 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 07:56:37] 2026-03-19 06:55:46,699 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 07:56:37] 2026-03-19 06:55:49,414 | INFO     | job.realtimelogging is not enabled
[2026-03-19 07:56:37] 2026-03-19 06:55:50,418 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 07:56:37] 2026-03-19 06:56:09,403 | INFO     | PID=984765 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-19 07:56:37] 2026-03-19 06:56:09,403 | INFO     | .. there are 3 such processes running
[2026-03-19 07:56:37] 2026-03-19 06:56:09,404 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 07:56:37] 2026-03-19 06:56:09,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 07:56:37] 2026-03-19 06:56:09,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 07:56:37] 2026-03-19 06:56:18,464 [wrapper] supervise_pilot (15 min periods counter: 5)
[2026-03-19 07:56:37] 2026-03-19 06:56:31,474 | INFO     | [monitor] cgroup control has ended
[2026-03-19 07:56:37] 2026-03-19 06:56:32,188 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140317601924928)>', '<ExcThread(monitor, started 140316933854976)>']
[2026-03-19 07:56:37] 2026-03-19 06:56:32,495 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 07:56:37] 2026-03-19 06:56:32,495 | INFO     | [monitor] control thread has ended
[2026-03-19 07:56:37] 2026-03-19 06:56:37,214 | INFO     | all workflow threads have been joined
[2026-03-19 07:56:37] 2026-03-19 06:56:37,214 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 07:56:37] 2026-03-19 06:56:37,215 | INFO     | traces error code: 0
[2026-03-19 07:56:37] 2026-03-19 06:56:37,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 07:56:37] 2026-03-19 06:56:37,257 [wrapper] ==== pilot stdout END ====
[2026-03-19 07:56:37] 2026-03-19 06:56:37,258 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 07:56:37] 2026-03-19 06:56:37,259 [wrapper] pilotpid: 984765
[2026-03-19 07:56:37] 2026-03-19 06:56:37,259 [wrapper] Pilot exit status: 0
[2026-03-19 07:56:37] 2026-03-19 06:56:37,263 [wrapper] pandaids: 7048425405
[2026-03-19 07:56:37] 2026-03-19 06:56:37,271 [wrapper] cleanup supervisor_pilot 1012901 984766
[2026-03-19 07:56:37] 2026-03-19 06:56:37,272 [wrapper] Test setup, not cleaning
[2026-03-19 07:56:37] 2026-03-19 06:56:37,273 [wrapper] apfmon messages muted
[2026-03-19 07:56:37] 2026-03-19 06:56:37,274 [wrapper] ==== wrapper stdout END ====
[2026-03-19 07:56:37] 2026-03-19 06:56:37,274 [wrapper] ==== wrapper stderr END ====
[2026-03-19 07:56:37]  *** Error codes and diagnostics ***
[2026-03-19 07:56:37]     "exeErrorCode": 0,
[2026-03-19 07:56:37]     "exeErrorDiag": "",
[2026-03-19 07:56:37]     "pilotErrorCode": 0,
[2026-03-19 07:56:37]     "pilotErrorDiag": "",
[2026-03-19 07:56:37]  *** Listing of results directory ***
[2026-03-19 07:56:37] total 562468
[2026-03-19 07:56:37] -rw-r--r-- 1 boinc boinc    584627 10 mars  07:40 pilot3.tar.gz
[2026-03-19 07:56:37] -rwx------ 1 boinc boinc     36322 10 mars  07:43 runpilot2-wrapper.sh
[2026-03-19 07:56:37] -rw-r--r-- 1 boinc boinc      5111 10 mars  07:44 queuedata.json
[2026-03-19 07:56:37] -rw-r--r-- 1 boinc boinc       100 19 mars  06:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 07:56:37] -rwxr-xr-x 1 boinc boinc      7986 19 mars  06:56 run_atlas
[2026-03-19 07:56:37] -rw-r--r-- 1 boinc boinc       105 19 mars  06:56 job.xml
[2026-03-19 07:56:37] -rw-r--r-- 2 boinc boinc     15845 19 mars  06:56 start_atlas.sh
[2026-03-19 07:56:37] drwxrwx--x 2 boinc boinc      4096 19 mars  06:56 shared
[2026-03-19 07:56:37] -rw-r--r-- 2 boinc boinc    597956 19 mars  06:56 input.tar.gz
[2026-03-19 07:56:37] -rw-r--r-- 1 boinc boinc      9538 19 mars  06:56 init_data.xml
[2026-03-19 07:56:37] -rw-r--r-- 2 boinc boinc 327074227 19 mars  06:56 EVNT.48997945._000061.pool.root.1
[2026-03-19 07:56:37] -rw-r--r-- 1 boinc boinc         0 19 mars  06:56 boinc_setup_complete
[2026-03-19 07:56:37] -rw-r--r-- 1 boinc boinc         0 19 mars  06:56 boinc_lockfile
[2026-03-19 07:56:37] -rw-r--r-- 1 boinc boinc      2570 19 mars  06:56 pandaJob.out
[2026-03-19 07:56:37] -rw------- 1 boinc boinc   1010817 19 mars  06:56 agis_schedconf.cvmfs.json
[2026-03-19 07:56:37] -rw------- 1 boinc boinc   1511579 19 mars  06:56 agis_ddmendpoints.agis.ALL.json
[2026-03-19 07:56:37] -rw------- 1 boinc boinc       427 19 mars  06:56 workernode_map.json
[2026-03-19 07:56:37] drwx------ 5 boinc boinc      4096 19 mars  06:56 pilot3
[2026-03-19 07:56:37] -rw------- 1 boinc boinc 243139916 19 mars  07:55 HITS.48997948._001565.pool.root.1
[2026-03-19 07:56:37] -rw-r--r-- 1 boinc boinc       529 19 mars  07:55 boinc_task_state.xml
[2026-03-19 07:56:37] -rw------- 1 boinc boinc      1025 19 mars  07:55 memory_monitor_summary.json
[2026-03-19 07:56:37] -rw------- 1 boinc boinc    356577 19 mars  07:55 log.48997948._001565.job.log.tgz.1
[2026-03-19 07:56:37] -rw------- 1 boinc boinc      6303 19 mars  07:55 heartbeat.json
[2026-03-19 07:56:37] -rw------- 1 boinc boinc        95 19 mars  07:56 pilot_heartbeat.json
[2026-03-19 07:56:37] -rw-r--r-- 1 boinc boinc        27 19 mars  07:56 wrapper_checkpoint.txt
[2026-03-19 07:56:37] -rw-r--r-- 1 boinc boinc      8192 19 mars  07:56 boinc_mmap_file
[2026-03-19 07:56:37] -rw------- 1 boinc boinc      4891 19 mars  07:56 pilotlog.txt
[2026-03-19 07:56:37] -rw------- 1 boinc boinc    544610 19 mars  07:56 log.48997948._001565.job.log.1
[2026-03-19 07:56:37] -rw-r--r-- 1 boinc boinc       620 19 mars  07:56 runtime_log
[2026-03-19 07:56:37] -rw------- 1 boinc boinc    921600 19 mars  07:56 result.tar.gz
[2026-03-19 07:56:37] -rw------- 1 boinc boinc       357 19 mars  07:56 output.list
[2026-03-19 07:56:37] -rw-r--r-- 1 boinc boinc      8796 19 mars  07:56 runtime_log.err
[2026-03-19 07:56:37] -rw------- 1 boinc boinc       645 19 mars  07:56 0cdNDmkz5J9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmyFfLDmYE4Qvn.diag
[2026-03-19 07:56:37] -rw-r--r-- 1 boinc boinc     21470 19 mars  07:56 stderr.txt
[2026-03-19 07:56:37] HITS file was successfully produced:
[2026-03-19 07:56:37] -rw------- 1 boinc boinc 243139916 19 mars  07:55 shared/HITS.pool.root.1
[2026-03-19 07:56:37]  *** Contents of shared directory: ***
[2026-03-19 07:56:37] total 558364
[2026-03-19 07:56:37] -rw-r--r-- 2 boinc boinc     15845 19 mars  06:56 start_atlas.sh
[2026-03-19 07:56:37] -rw-r--r-- 2 boinc boinc    597956 19 mars  06:56 input.tar.gz
[2026-03-19 07:56:37] -rw-r--r-- 2 boinc boinc 327074227 19 mars  06:56 ATLAS.root_0
[2026-03-19 07:56:37] -rw------- 1 boinc boinc 243139916 19 mars  07:55 HITS.pool.root.1
[2026-03-19 07:56:37] -rw------- 1 boinc boinc    921600 19 mars  07:56 result.tar.gz
07:56:38 (980975): run_atlas exited; CPU time 18179.120440
07:56:38 (980975): called boinc_finish(0)

</stderr_txt>
]]>

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