Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:16:00 (7669): wrapper (7.7.26015): starting
08:16:00 (7669): wrapper: running run_atlas (--nthreads 8)
[2026-03-19 08:16:00] Arguments: --nthreads 8
[2026-03-19 08:16:00] Threads: 8
[2026-03-19 08:16:00] Checking for CVMFS
[2026-03-19 08:16:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 08:16:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 08:16:02] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 08:16:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 08:16:03] 2.11.2.0 32209 134445 139664 157445 0 266 13280198 25165824 4332 130560 148 43560487 99.819 32014077 1080 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-19 08:16:03] CVMFS is ok
[2026-03-19 08:16:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 08:16:03] Checking for apptainer binary...
[2026-03-19 08:16:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 08:16:03] Running /usr/bin/apptainer --version
[2026-03-19 08:16:03] apptainer version 1.3.2-1.el7
[2026-03-19 08:16:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 08:16:12] cg-vwn500.simple-grid.lan
[2026-03-19 08:16:12] apptainer works
[2026-03-19 08:16:12] Set ATHENA_PROC_NUMBER=8
[2026-03-19 08:16:12] Set ATHENA_CORE_NUMBER=8
[2026-03-19 08:16:12] Starting ATLAS job with PandaID=7048465576
[2026-03-19 08:16:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 12:58:09]  *** The last 200 lines of the pilot log: ***
[2026-03-19 12:58:09] 2026-03-19 11:57:02,257 | INFO     | log transfer has been attempted: DONE
[2026-03-19 12:58:09] 2026-03-19 11:57:02,257 | INFO     | job 7048465576 has finished - writing final server update
[2026-03-19 12:58:09] 2026-03-19 11:57:02,257 | INFO     | total number of processed events: 400 (read)
[2026-03-19 12:58:09] 2026-03-19 11:57:02,259 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7048465576/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 12:58:09] 2026-03-19 11:57:02,260 | INFO     | extracted standard info from prmon json
[2026-03-19 12:58:09] 2026-03-19 11:57:02,260 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 12:58:09] 2026-03-19 11:57:02,260 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 12:58:09] 2026-03-19 11:57:02,260 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 12:58:09] 2026-03-19 11:57:02,260 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 12:58:09] 2026-03-19 11:57:02,265 | INFO     | fitting pss+swap vs Time
[2026-03-19 12:58:09] 2026-03-19 11:57:02,266 | INFO     | sum of square deviations: 6035722470.0
[2026-03-19 12:58:09] 2026-03-19 11:57:02,268 | INFO     | sum of deviations: -46592803816.0
[2026-03-19 12:58:09] 2026-03-19 11:57:02,268 | INFO     | mean x: 1773913211.0
[2026-03-19 12:58:09] 2026-03-19 11:57:02,268 | INFO     | mean y: 2502929.3197026025
[2026-03-19 12:58:09] 2026-03-19 11:57:02,268 | INFO     | intersect: 13696238954.716114
[2026-03-19 12:58:09] 2026-03-19 11:57:02,269 | INFO     | chi2: 2.5230063141261057
[2026-03-19 12:58:09] 2026-03-19 11:57:02,269 | INFO     | sum of square deviations: 5705372090.0
[2026-03-19 12:58:09] 2026-03-19 11:57:02,272 | INFO     | sum of deviations: -27809549982.0
[2026-03-19 12:58:09] 2026-03-19 11:57:02,272 | INFO     | mean x: 1773913058.5
[2026-03-19 12:58:09] 2026-03-19 11:57:02,272 | INFO     | mean y: 2511477.3636363638
[2026-03-19 12:58:09] 2026-03-19 11:57:02,272 | INFO     | intersect: 8649050754.011978
[2026-03-19 12:58:09] 2026-03-19 11:57:02,272 | INFO     | chi2: 1.7560936785940915
[2026-03-19 12:58:09] 2026-03-19 11:57:02,272 | INFO     | current chi2=1.7560936785940915 (change=30.396778289381725 %)
[2026-03-19 12:58:09] 2026-03-19 11:57:02,273 | INFO     | sum of square deviations: 5387301010.0
[2026-03-19 12:58:09] 2026-03-19 11:57:02,275 | INFO     | sum of deviations: -27003295413.999996
[2026-03-19 12:58:09] 2026-03-19 11:57:02,275 | INFO     | mean x: 1773912906.0
[2026-03-19 12:58:09] 2026-03-19 11:57:02,275 | INFO     | mean y: 2511863.9536679536
[2026-03-19 12:58:09] 2026-03-19 11:57:02,275 | INFO     | intersect: 8894068907.17617
[2026-03-19 12:58:09] 2026-03-19 11:57:02,276 | INFO     | chi2: 1.7548658766269032
[2026-03-19 12:58:09] 2026-03-19 11:57:02,276 | INFO     | current chi2=1.7548658766269032 (change=0.06991665548111685 %)
[2026-03-19 12:58:09] 2026-03-19 11:57:02,276 | INFO     | right removable region: 258
[2026-03-19 12:58:09] 2026-03-19 11:57:02,277 | INFO     | sum of square deviations: 5705372090.0
[2026-03-19 12:58:09] 2026-03-19 11:57:02,279 | INFO     | sum of deviations: -87230382622.5
[2026-03-19 12:58:09] 2026-03-19 11:57:02,279 | INFO     | mean x: 1773913363.5
[2026-03-19 12:58:09] 2026-03-19 11:57:02,279 | INFO     | mean y: 2521523.321969697
[2026-03-19 12:58:09] 2026-03-19 11:57:02,279 | INFO     | intersect: 27124177919.490677
[2026-03-19 12:58:09] 2026-03-19 11:57:02,280 | INFO     | chi2: 1.0434173605672536
[2026-03-19 12:58:09] 2026-03-19 11:57:02,280 | INFO     | current chi2=1.0434173605672536 (change=58.64388627466981 %)
[2026-03-19 12:58:09] 2026-03-19 11:57:02,280 | INFO     | sum of square deviations: 5387301010.0
[2026-03-19 12:58:09] 2026-03-19 11:57:02,282 | INFO     | sum of deviations: -84825931744.99997
[2026-03-19 12:58:09] 2026-03-19 11:57:02,283 | INFO     | mean x: 1773913516.0
[2026-03-19 12:58:09] 2026-03-19 11:57:02,283 | INFO     | mean y: 2520345.4826254826
[2026-03-19 12:58:09] 2026-03-19 11:57:02,283 | INFO     | intersect: 27933736097.198883
[2026-03-19 12:58:09] 2026-03-19 11:57:02,283 | INFO     | chi2: 1.028578662842759
[2026-03-19 12:58:09] 2026-03-19 11:57:02,283 | INFO     | current chi2=1.028578662842759 (change=1.4221248644384925 %)
[2026-03-19 12:58:09] 2026-03-19 11:57:02,283 | INFO     | left removable region: 20
[2026-03-19 12:58:09] 2026-03-19 11:57:02,284 | INFO     | sum of square deviations: 4180243959.5
[2026-03-19 12:58:09] 2026-03-19 11:57:02,286 | INFO     | sum of deviations: -49295308623.50001
[2026-03-19 12:58:09] 2026-03-19 11:57:02,286 | INFO     | mean x: 1773913485.5
[2026-03-19 12:58:09] 2026-03-19 11:57:02,286 | INFO     | mean y: 2522164.0798319327
[2026-03-19 12:58:09] 2026-03-19 11:57:02,286 | INFO     | intersect: 20921304318.02151
[2026-03-19 12:58:09] 2026-03-19 11:57:02,286 | INFO     | chi2: 0.22150086206136993
[2026-03-19 12:58:09] 2026-03-19 11:57:02,286 | INFO     | current memory leak: -11.79 B/s (using 238 data points, chi2=0.22)
[2026-03-19 12:58:09] 2026-03-19 11:57:02,287 | INFO     | could have reported an average CPU frequency of 2249 MHz (13 samples)
[2026-03-19 12:58:09] 2026-03-19 11:57:02,287 | INFO     | ..............................
[2026-03-19 12:58:09] 2026-03-19 11:57:02,287 | INFO     | . Timing measurements:
[2026-03-19 12:58:09] 2026-03-19 11:57:02,287 | INFO     | . get job = 0 s
[2026-03-19 12:58:09] 2026-03-19 11:57:02,287 | INFO     | . initial setup = 107 s
[2026-03-19 12:58:09] 2026-03-19 11:57:02,288 | INFO     | . payload setup = 141 s
[2026-03-19 12:58:09] 2026-03-19 11:57:02,288 | INFO     | . stage-in = 0 s
[2026-03-19 12:58:09] 2026-03-19 11:57:02,288 | INFO     | . payload execution = 16424 s
[2026-03-19 12:58:09] 2026-03-19 11:57:02,288 | INFO     | . stage-out = 4 s
[2026-03-19 12:58:09] 2026-03-19 11:57:02,288 | INFO     | . log creation = 0 s
[2026-03-19 12:58:09] 2026-03-19 11:57:02,288 | INFO     | ..............................
[2026-03-19 12:58:09] 2026-03-19 11:57:02,396 | INFO     | 
[2026-03-19 12:58:09] 2026-03-19 11:57:02,397 | INFO     | job summary report
[2026-03-19 12:58:09] 2026-03-19 11:57:02,397 | INFO     | --------------------------------------------------
[2026-03-19 12:58:09] 2026-03-19 11:57:02,397 | INFO     | PanDA job id: 7048465576
[2026-03-19 12:58:09] 2026-03-19 11:57:02,397 | INFO     | task id: 48966988
[2026-03-19 12:58:09] 2026-03-19 11:57:02,397 | INFO     | errors: (none)
[2026-03-19 12:58:09] 2026-03-19 11:57:02,397 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 12:58:09] 2026-03-19 11:57:02,397 | INFO     | pilot state: finished 
[2026-03-19 12:58:09] 2026-03-19 11:57:02,397 | INFO     | transexitcode: 0
[2026-03-19 12:58:09] 2026-03-19 11:57:02,397 | INFO     | exeerrorcode: 0
[2026-03-19 12:58:09] 2026-03-19 11:57:02,398 | INFO     | exeerrordiag: 
[2026-03-19 12:58:09] 2026-03-19 11:57:02,398 | INFO     | exitcode: 0
[2026-03-19 12:58:09] 2026-03-19 11:57:02,398 | INFO     | exitmsg: OK
[2026-03-19 12:58:09] 2026-03-19 11:57:02,398 | INFO     | cpuconsumptiontime: 62514 s
[2026-03-19 12:58:09] 2026-03-19 11:57:02,398 | INFO     | nevents: 400
[2026-03-19 12:58:09] 2026-03-19 11:57:02,398 | INFO     | neventsw: 0
[2026-03-19 12:58:09] 2026-03-19 11:57:02,398 | INFO     | pid: 16191
[2026-03-19 12:58:09] 2026-03-19 11:57:02,398 | INFO     | pgrp: 16191
[2026-03-19 12:58:09] 2026-03-19 11:57:02,398 | INFO     | corecount: 8
[2026-03-19 12:58:09] 2026-03-19 11:57:02,398 | INFO     | event service: False
[2026-03-19 12:58:09] 2026-03-19 11:57:02,399 | INFO     | sizes: {0: 2279838, 1: 2280299, 12: 2280299, 16569: 2311785, 16570: 2311784, 16575: 2320838, 16577: 2321022, 16578: 2321216}
[2026-03-19 12:58:09] 2026-03-19 11:57:02,399 | INFO     | --------------------------------------------------
[2026-03-19 12:58:09] 2026-03-19 11:57:02,399 | INFO     | 
[2026-03-19 12:58:09] 2026-03-19 11:57:02,399 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-03-19 12:58:09] 2026-03-19 11:57:02,826 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,826 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,826 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,827 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,827 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,827 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,827 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,827 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,827 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,827 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,827 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,827 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,828 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,828 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,828 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,828 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,828 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,828 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 12:58:09] 2026-03-19 11:57:02,828 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,828 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 12:58:09] 2026-03-19 11:57:02,829 | INFO     | job 7048465576 has completed (purged errors)
[2026-03-19 12:58:09] 2026-03-19 11:57:02,829 | INFO     | overall cleanup function is called
[2026-03-19 12:58:09] 2026-03-19 11:57:03,837 | INFO     | --- collectZombieJob: --- 10, [16191]
[2026-03-19 12:58:09] 2026-03-19 11:57:03,837 | INFO     | zombie collector waiting for pid 16191
[2026-03-19 12:58:09] 2026-03-19 11:57:03,838 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 12:58:09] 2026-03-19 11:57:03,838 | INFO     | collected zombie processes
[2026-03-19 12:58:09] 2026-03-19 11:57:03,838 | INFO     | will attempt to kill all subprocesses of pid=16191
[2026-03-19 12:58:09] 2026-03-19 11:57:03,957 | INFO     | process IDs to be killed: [16191] (in reverse order)
[2026-03-19 12:58:09] 2026-03-19 11:57:04,839 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 12:58:09] 2026-03-19 11:57:04,839 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 12:58:09] 2026-03-19 11:57:04,842 | INFO     | did not find any defunct processes belonging to 16191
[2026-03-19 12:58:09] 2026-03-19 11:57:04,845 | INFO     | did not find any defunct processes belonging to 16191
[2026-03-19 12:58:09] 2026-03-19 11:57:04,845 | INFO     | ready for new job
[2026-03-19 12:58:09] 2026-03-19 11:57:04,845 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 12:58:09] 2026-03-19 11:57:04,847 | INFO     | **************************************
[2026-03-19 12:58:09] 2026-03-19 11:57:04,847 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-19 12:58:09] 2026-03-19 11:57:04,847 | INFO     | **************************************
[2026-03-19 12:58:09] 2026-03-19 11:57:04,848 | INFO     | 
[2026-03-19 12:58:09] 2026-03-19 11:57:04,856 | INFO     | pilot is running in a VM
[2026-03-19 12:58:09] 2026-03-19 11:57:04,856 | INFO     | architecture information:
[2026-03-19 12:58:09] 2026-03-19 11:57:04,862 | INFO     | executing command: cat /etc/os-release
[2026-03-19 12:58:09] 2026-03-19 11:57:05,039 | INFO     | cat /etc/os-release:
[2026-03-19 12:58:09] NAME="CentOS Linux"
[2026-03-19 12:58:09] VERSION="7 (Core)"
[2026-03-19 12:58:09] ID="centos"
[2026-03-19 12:58:09] ID_LIKE="rhel fedora"
[2026-03-19 12:58:09] VERSION_ID="7"
[2026-03-19 12:58:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 12:58:09] ANSI_COLOR="0;31"
[2026-03-19 12:58:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 12:58:09] HOME_URL="https://www.centos.org/"
[2026-03-19 12:58:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 12:58:09] 
[2026-03-19 12:58:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 12:58:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 12:58:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 12:58:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 12:58:09] 
[2026-03-19 12:58:09] 2026-03-19 11:57:05,039 | INFO     | **************************************
[2026-03-19 12:58:09] 2026-03-19 11:57:05,542 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-03-19 12:58:09] 2026-03-19 11:57:05,768 | INFO     | sufficient remaining disk space (496064528384 B)
[2026-03-19 12:58:09] 2026-03-19 11:57:05,768 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 12:58:09] 2026-03-19 11:57:05,768 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 12:58:09] 2026-03-19 11:57:05,768 | INFO     | update_server=False
[2026-03-19 12:58:09] 2026-03-19 11:57:05,769 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 12:58:09] 2026-03-19 11:57:05,769 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 12:58:09] 2026-03-19 11:57:05,770 | INFO     | aborting loop
[2026-03-19 12:58:09] 2026-03-19 11:57:05,770 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 12:58:09] 2026-03-19 11:57:06,371 | INFO     | all payload control threads have been joined
[2026-03-19 12:58:09] 2026-03-19 11:57:06,642 | INFO     | all data control threads have been joined
[2026-03-19 12:58:09] 2026-03-19 11:57:06,682 | INFO     | all job control threads have been joined
[2026-03-19 12:58:09] 2026-03-19 11:57:06,774 | INFO     | [job] retrieve thread has finished
[2026-03-19 12:58:09] 2026-03-19 11:57:06,775 | INFO     | [job] job monitor thread has finished
[2026-03-19 12:58:09] 2026-03-19 11:57:06,810 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 12:58:09] 2026-03-19 11:57:06,853 | INFO     | [payload] validate_post thread has finished
[2026-03-19 12:58:09] 2026-03-19 11:57:07,337 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 12:58:09] 2026-03-19 11:57:07,341 | INFO     | [payload] failed_post thread has finished
[2026-03-19 12:58:09] 2026-03-19 11:57:07,377 | INFO     | [payload] control thread has finished
[2026-03-19 12:58:09] 2026-03-19 11:57:07,406 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 12:58:09] 2026-03-19 11:57:07,480 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 12:58:09] 2026-03-19 11:57:07,648 | INFO     | [data] control thread has finished
[2026-03-19 12:58:09] 2026-03-19 11:57:07,688 | INFO     | [job] control thread has finished
[2026-03-19 12:58:09] 2026-03-19 11:57:07,754 | INFO     | [data] copytool_in thread has finished
[2026-03-19 12:58:09] 2026-03-19 11:57:07,776 | INFO     | [data] copytool_out thread has finished
[2026-03-19 12:58:09] 2026-03-19 11:57:07,998 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 12:58:09] 2026-03-19 11:57:08,105 | INFO     | [job] validate thread has finished
[2026-03-19 12:58:09] 2026-03-19 11:57:08,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 12:58:09] 2026-03-19 11:57:08,412 | INFO     | [job] queue monitor thread has finished
[2026-03-19 12:58:09] 2026-03-19 11:57:12,168 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 12:58:09] 2026-03-19 11:57:34,425 | INFO     | PID=11645 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-19 12:58:09] 2026-03-19 11:57:34,425 | INFO     | .. there are 9 such processes running
[2026-03-19 12:58:09] 2026-03-19 11:57:34,426 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 12:58:09] 2026-03-19 11:57:34,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 12:58:09] 2026-03-19 11:57:34,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 12:58:09] 2026-03-19 11:57:59,844 | INFO     | [monitor] cgroup control has ended
[2026-03-19 12:58:09] 2026-03-19 11:58:00,532 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140082493466432)>', '<ExcThread(monitor, started 140081834751744)>']
[2026-03-19 12:58:09] 2026-03-19 11:58:00,582 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 12:58:09] 2026-03-19 11:58:00,582 | INFO     | [monitor] control thread has ended
[2026-03-19 12:58:09] 2026-03-19 11:58:05,558 | INFO     | all workflow threads have been joined
[2026-03-19 12:58:09] 2026-03-19 11:58:05,559 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 12:58:09] 2026-03-19 11:58:05,559 | INFO     | traces error code: 0
[2026-03-19 12:58:09] 2026-03-19 11:58:05,559 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 12:58:09] 2026-03-19 11:58:05,930 [wrapper] ==== pilot stdout END ====
[2026-03-19 12:58:09] 2026-03-19 11:58:06,004 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 12:58:09] 2026-03-19 11:58:06,089 [wrapper] pilotpid: 11645
[2026-03-19 12:58:09] 2026-03-19 11:58:06,181 [wrapper] Pilot exit status: 0
[2026-03-19 12:58:09] 2026-03-19 11:58:06,559 [wrapper] pandaids: 7048465576
[2026-03-19 12:58:09] 2026-03-19 11:58:07,424 [wrapper] cleanup supervisor_pilot 31220 11646
[2026-03-19 12:58:09] 2026-03-19 11:58:07,497 [wrapper] Test setup, not cleaning
[2026-03-19 12:58:09] 2026-03-19 11:58:07,572 [wrapper] apfmon messages muted
[2026-03-19 12:58:09] 2026-03-19 11:58:07,665 [wrapper] ==== wrapper stdout END ====
[2026-03-19 12:58:09] 2026-03-19 11:58:07,768 [wrapper] ==== wrapper stderr END ====
[2026-03-19 12:58:09]  *** Error codes and diagnostics ***
[2026-03-19 12:58:09]     "exeErrorCode": 0,
[2026-03-19 12:58:09]     "exeErrorDiag": "",
[2026-03-19 12:58:09]     "pilotErrorCode": 0,
[2026-03-19 12:58:09]     "pilotErrorDiag": "",
[2026-03-19 12:58:09]  *** Listing of results directory ***
[2026-03-19 12:58:09] total 409128
[2026-03-19 12:58:09] -rw-r--r--. 1 boinc boinc    584627 Mar 10 07:40 pilot3.tar.gz
[2026-03-19 12:58:09] -rw-r--r--. 1 boinc boinc      5111 Mar 10 07:41 queuedata.json
[2026-03-19 12:58:09] -rwx------. 1 boinc boinc     36322 Mar 10 07:41 runpilot2-wrapper.sh
[2026-03-19 12:58:09] -rw-r--r--. 1 boinc boinc       100 Mar 19 08:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 12:58:09] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 08:16 run_atlas
[2026-03-19 12:58:09] -rw-r--r--. 1 boinc boinc       105 Mar 19 08:16 job.xml
[2026-03-19 12:58:09] -rw-r--r--. 1 boinc boinc      6391 Mar 19 08:16 init_data.xml
[2026-03-19 12:58:09] -rw-r--r--. 2 boinc boinc 214537825 Mar 19 08:16 EVNT.48966985._001004.pool.root.1
[2026-03-19 12:58:09] -rw-r--r--. 2 boinc boinc     15845 Mar 19 08:16 start_atlas.sh
[2026-03-19 12:58:09] drwxrwx--x. 2 boinc boinc        68 Mar 19 08:16 shared
[2026-03-19 12:58:09] -rw-r--r--. 2 boinc boinc    597973 Mar 19 08:16 input.tar.gz
[2026-03-19 12:58:09] -rw-r--r--. 1 boinc boinc         0 Mar 19 08:16 boinc_lockfile
[2026-03-19 12:58:09] -rw-r--r--. 1 boinc boinc      2592 Mar 19 08:16 pandaJob.out
[2026-03-19 12:58:09] -rw-------. 1 boinc boinc       415 Mar 19 08:20 workernode_map.json
[2026-03-19 12:58:09] -rw-------. 1 boinc boinc   1010808 Mar 19 08:20 agis_schedconf.cvmfs.json
[2026-03-19 12:58:09] drwx------. 5 boinc boinc      4096 Mar 19 08:20 pilot3
[2026-03-19 12:58:09] -rw-------. 1 boinc boinc 194868035 Mar 19 12:55 HITS.48966988._025380.pool.root.1
[2026-03-19 12:58:09] -rw-r--r--. 1 boinc boinc       530 Mar 19 12:55 boinc_task_state.xml
[2026-03-19 12:58:09] -rw-------. 1 boinc boinc      1020 Mar 19 12:56 memory_monitor_summary.json
[2026-03-19 12:58:09] -rw-------. 1 boinc boinc   1511579 Mar 19 12:56 agis_ddmendpoints.agis.ALL.json
[2026-03-19 12:58:09] -rw-------. 1 boinc boinc    497155 Mar 19 12:56 log.48966988._025380.job.log.tgz.1
[2026-03-19 12:58:09] -rw-------. 1 boinc boinc      6322 Mar 19 12:57 heartbeat.json
[2026-03-19 12:58:09] -rw-------. 1 boinc boinc        95 Mar 19 12:57 pilot_heartbeat.json
[2026-03-19 12:58:09] -rw-r--r--. 1 boinc boinc      8192 Mar 19 12:57 boinc_mmap_file
[2026-03-19 12:58:09] -rw-r--r--. 1 boinc boinc        28 Mar 19 12:57 wrapper_checkpoint.txt
[2026-03-19 12:58:09] -rw-------. 1 boinc boinc      4880 Mar 19 12:58 pilotlog.txt
[2026-03-19 12:58:09] -rw-------. 1 boinc boinc   2307288 Mar 19 12:58 log.48966988._025380.job.log.1
[2026-03-19 12:58:09] -rw-------. 1 boinc boinc       357 Mar 19 12:58 output.list
[2026-03-19 12:58:09] -rw-r--r--. 1 boinc boinc       620 Mar 19 12:58 runtime_log
[2026-03-19 12:58:09] -rw-------. 1 boinc boinc   2826240 Mar 19 12:58 result.tar.gz
[2026-03-19 12:58:09] -rw-r--r--. 1 boinc boinc      8816 Mar 19 12:58 runtime_log.err
[2026-03-19 12:58:09] -rw-------. 1 boinc boinc       656 Mar 19 12:58 gmvMDm3x5J9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmNDfLDmJPJQrn.diag
[2026-03-19 12:58:09] -rw-r--r--. 1 boinc boinc     20716 Mar 19 12:58 stderr.txt
[2026-03-19 12:58:09] HITS file was successfully produced:
[2026-03-19 12:58:09] -rw-------. 1 boinc boinc 194868035 Mar 19 12:55 shared/HITS.pool.root.1
[2026-03-19 12:58:09]  *** Contents of shared directory: ***
[2026-03-19 12:58:09] total 403176
[2026-03-19 12:58:09] -rw-r--r--. 2 boinc boinc 214537825 Mar 19 08:16 ATLAS.root_0
[2026-03-19 12:58:09] -rw-r--r--. 2 boinc boinc     15845 Mar 19 08:16 start_atlas.sh
[2026-03-19 12:58:09] -rw-r--r--. 2 boinc boinc    597973 Mar 19 08:16 input.tar.gz
[2026-03-19 12:58:09] -rw-------. 1 boinc boinc 194868035 Mar 19 12:55 HITS.pool.root.1
[2026-03-19 12:58:09] -rw-------. 1 boinc boinc   2826240 Mar 19 12:58 result.tar.gz
12:58:11 (7669): run_atlas exited; CPU time 62734.157834
12:58:11 (7669): called boinc_finish(0)

</stderr_txt>
]]>

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