Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:08:46 (4113195): wrapper (7.7.26015): starting
07:08:46 (4113195): wrapper: running run_atlas (--nthreads 3)
[2026-03-19 07:08:46] Arguments: --nthreads 3
[2026-03-19 07:08:46] Threads: 3
[2026-03-19 07:08:46] Checking for CVMFS
[2026-03-19 07:08:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 07:08:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 07:08:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 07:08:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 07:08:48] 2.9.2.0 3798100 3800 78464 157443 2 50 31382457 36864000 0 130560 0 1021768 99.975 130359 5879 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-19 07:08:48] CVMFS is ok
[2026-03-19 07:08:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 07:08:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 07:08:48] Further information can be found at the LHC@home message board.
[2026-03-19 07:08:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 07:08:48] Checking for apptainer binary...
[2026-03-19 07:08:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 07:08:48] Running /usr/bin/apptainer --version
[2026-03-19 07:08:48] apptainer version 1.4.1-1.1
[2026-03-19 07:08:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 07:08:48] thA312a
[2026-03-19 07:08:48] apptainer works
[2026-03-19 07:08:48] Set ATHENA_PROC_NUMBER=3
[2026-03-19 07:08:48] Set ATHENA_CORE_NUMBER=3
[2026-03-19 07:08:48] Starting ATLAS job with PandaID=7036205048
[2026-03-19 07:08:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 08:51:11]  *** The last 200 lines of the pilot log: ***
[2026-03-19 08:51:11] 2026-03-19 07:50:34,762 | INFO     | did not find any defunct processes belonging to 4121675
[2026-03-19 08:51:11] 2026-03-19 07:50:34,762 | INFO     | ready for new job
[2026-03-19 08:51:11] 2026-03-19 07:50:34,762 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 08:51:11] 2026-03-19 07:50:34,763 | INFO     | **************************************
[2026-03-19 08:51:11] 2026-03-19 07:50:34,763 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-19 08:51:11] 2026-03-19 07:50:34,763 | INFO     | **************************************
[2026-03-19 08:51:11] 2026-03-19 07:50:34,763 | INFO     | 
[2026-03-19 08:51:11] 2026-03-19 07:50:34,764 | INFO     | architecture information:
[2026-03-19 08:51:11] 2026-03-19 07:50:34,764 | INFO     | executing command: cat /etc/os-release
[2026-03-19 08:51:11] 2026-03-19 07:50:34,773 | INFO     | cat /etc/os-release:
[2026-03-19 08:51:11] NAME="CentOS Linux"
[2026-03-19 08:51:11] VERSION="7 (Core)"
[2026-03-19 08:51:11] ID="centos"
[2026-03-19 08:51:11] ID_LIKE="rhel fedora"
[2026-03-19 08:51:11] VERSION_ID="7"
[2026-03-19 08:51:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 08:51:11] ANSI_COLOR="0;31"
[2026-03-19 08:51:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 08:51:11] HOME_URL="https://www.centos.org/"
[2026-03-19 08:51:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 08:51:11] 
[2026-03-19 08:51:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 08:51:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 08:51:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 08:51:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 08:51:11] 
[2026-03-19 08:51:11] 2026-03-19 07:50:34,773 | INFO     | **************************************
[2026-03-19 08:51:11] 2026-03-19 07:50:35,275 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-19 08:51:11] 2026-03-19 07:50:35,289 | INFO     | sufficient remaining disk space (273443454976 B)
[2026-03-19 08:51:11] 2026-03-19 07:50:35,289 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 08:51:11] 2026-03-19 07:50:35,289 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 08:51:11] 2026-03-19 07:50:35,289 | INFO     | update_server=False
[2026-03-19 08:51:11] 2026-03-19 07:50:35,289 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 08:51:11] 2026-03-19 07:50:35,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 08:51:11] 2026-03-19 07:50:35,290 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 08:51:11] 2026-03-19 07:50:35,290 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 08:51:11] 2026-03-19 07:50:35,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 08:51:11] 2026-03-19 07:50:35,290 | INFO     | aborting loop
[2026-03-19 08:51:11] 2026-03-19 07:50:35,623 | INFO     | all payload control threads have been joined
[2026-03-19 08:51:11] 2026-03-19 07:50:35,672 | INFO     | all job control threads have been joined
[2026-03-19 08:51:11] 2026-03-19 07:50:36,265 | INFO     | all data control threads have been joined
[2026-03-19 08:51:11] 2026-03-19 07:50:36,295 | INFO     | [job] retrieve thread has finished
[2026-03-19 08:51:11] 2026-03-19 07:50:36,295 | INFO     | [job] job monitor thread has finished
[2026-03-19 08:51:11] 2026-03-19 07:50:36,296 | INFO     | [job] queue monitor thread has finished
[2026-03-19 08:51:11] 2026-03-19 07:50:36,430 | INFO     | [data] copytool_in thread has finished
[2026-03-19 08:51:11] 2026-03-19 07:50:36,629 | INFO     | [payload] control thread has finished
[2026-03-19 08:51:11] 2026-03-19 07:50:36,677 | INFO     | [job] control thread has finished
[2026-03-19 08:51:11] 2026-03-19 07:50:36,730 | INFO     | [payload] validate_post thread has finished
[2026-03-19 08:51:11] 2026-03-19 07:50:37,228 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 08:51:11] 2026-03-19 07:50:37,271 | INFO     | [data] control thread has finished
[2026-03-19 08:51:11] 2026-03-19 07:50:37,296 | INFO     | [data] copytool_out thread has finished
[2026-03-19 08:51:11] 2026-03-19 07:50:37,664 | INFO     | [job] validate thread has finished
[2026-03-19 08:51:11] 2026-03-19 07:50:37,685 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 08:51:11] 2026-03-19 07:50:37,742 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 08:51:11] 2026-03-19 07:50:37,748 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 08:51:11] 2026-03-19 07:50:37,806 | INFO     | [payload] failed_post thread has finished
[2026-03-19 08:51:11] 2026-03-19 07:50:39,296 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 08:51:11] 2026-03-19 07:51:06,177 | INFO     | [monitor] cgroup control has ended
[2026-03-19 08:51:11] 2026-03-19 07:51:06,377 | INFO     | PID=4117242 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 08:51:11] 2026-03-19 07:51:06,377 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 08:51:11] 2026-03-19 07:51:06,377 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 08:51:11] 2026-03-19 07:51:06,377 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 08:51:11] 2026-03-19 07:51:06,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140340172515136)>', '<ExcThread(monitor, started 140339817977600)>']
[2026-03-19 08:51:11] 2026-03-19 07:51:07,383 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 08:51:11] 2026-03-19 07:51:07,383 | INFO     | [monitor] control thread has ended
[2026-03-19 08:51:11] 2026-03-19 07:51:11,538 | INFO     | all workflow threads have been joined
[2026-03-19 08:51:11] 2026-03-19 07:51:11,538 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 08:51:11] 2026-03-19 07:51:11,538 | INFO     | traces error code: 0
[2026-03-19 08:51:11] 2026-03-19 07:51:11,538 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 08:51:11] 2026-03-19 07:51:11,588 [wrapper] ==== pilot stdout END ====
[2026-03-19 08:51:11] 2026-03-19 07:51:11,591 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 08:51:11] 2026-03-19 07:51:11,593 [wrapper] pilotpid: 4117242
[2026-03-19 08:51:11] 2026-03-19 07:51:11,596 [wrapper] Pilot exit status: 0
[2026-03-19 08:51:11] 2026-03-19 07:51:11,604 [wrapper] pandaids: 7036205048
[2026-03-19 08:51:11] 2026-03-19 07:51:11,620 [wrapper] cleanup supervisor_pilot 4127135 4117243
[2026-03-19 08:51:11] 2026-03-19 07:51:11,623 [wrapper] Test setup, not cleaning
[2026-03-19 08:51:11] 2026-03-19 07:51:11,626 [wrapper] apfmon messages muted
[2026-03-19 08:51:11] 2026-03-19 07:51:11,628 [wrapper] ==== wrapper stdout END ====
[2026-03-19 08:51:11] 2026-03-19 07:51:11,631 [wrapper] ==== wrapper stderr END ====
[2026-03-19 08:51:11]  *** Error codes and diagnostics ***
[2026-03-19 08:51:11]     "exeErrorCode": 0,
[2026-03-19 08:51:11]     "exeErrorDiag": "",
[2026-03-19 08:51:11]     "pilotErrorCode": 0,
[2026-03-19 08:51:11]     "pilotErrorDiag": "",
[2026-03-19 08:51:11]  *** Listing of results directory ***
[2026-03-19 08:51:11] total 451864
[2026-03-19 08:51:11] -rw-r--r-- 1 boinc boinc    584627 Mar  3 05:44 pilot3.tar.gz
[2026-03-19 08:51:11] -rw-r--r-- 1 boinc boinc      5111 Mar  3 05:58 queuedata.json
[2026-03-19 08:51:11] -rwx------ 1 boinc boinc     36322 Mar  3 05:58 runpilot2-wrapper.sh
[2026-03-19 08:51:11] -rw-r--r-- 1 boinc boinc       100 Mar 19 07:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 08:51:11] -rwxr-xr-x 1 boinc boinc      7986 Mar 19 07:08 run_atlas
[2026-03-19 08:51:11] -rw-r--r-- 1 boinc boinc       105 Mar 19 07:08 job.xml
[2026-03-19 08:51:11] -rw-r--r-- 2 boinc boinc 252335028 Mar 19 07:08 EVNT.48459837._000003.pool.root.1
[2026-03-19 08:51:11] -rw-r--r-- 2 boinc boinc    597956 Mar 19 07:08 input.tar.gz
[2026-03-19 08:51:11] -rw-r--r-- 2 boinc boinc     15845 Mar 19 07:08 start_atlas.sh
[2026-03-19 08:51:11] drwxrwx--x 2 boinc boinc      4096 Mar 19 07:08 shared
[2026-03-19 08:51:11] -rw-r--r-- 1 boinc boinc         0 Mar 19 07:08 boinc_setup_complete
[2026-03-19 08:51:11] -rw-r--r-- 1 boinc boinc      6446 Mar 19 07:08 init_data.xml
[2026-03-19 08:51:11] -rw-r--r-- 1 boinc boinc         0 Mar 19 07:08 boinc_lockfile
[2026-03-19 08:51:11] -rw-r--r-- 1 boinc boinc      2613 Mar 19 07:08 pandaJob.out
[2026-03-19 08:51:11] -rw------- 1 boinc boinc   1010817 Mar 19 07:08 agis_schedconf.cvmfs.json
[2026-03-19 08:51:11] -rw------- 1 boinc boinc   1511579 Mar 19 07:08 agis_ddmendpoints.agis.ALL.json
[2026-03-19 08:51:11] -rw------- 1 boinc boinc       423 Mar 19 07:08 workernode_map.json
[2026-03-19 08:51:11] drwx------ 5 boinc boinc      4096 Mar 19 07:08 pilot3
[2026-03-19 08:51:11] -rw------- 1 boinc boinc 204138273 Mar 19 08:50 HITS.48851223._000061.pool.root.1
[2026-03-19 08:51:11] -rw-r--r-- 1 boinc boinc       529 Mar 19 08:50 boinc_task_state.xml
[2026-03-19 08:51:11] -rw------- 1 boinc boinc        95 Mar 19 08:50 pilot_heartbeat.json
[2026-03-19 08:51:11] -rw------- 1 boinc boinc      1013 Mar 19 08:50 memory_monitor_summary.json
[2026-03-19 08:51:11] -rw------- 1 boinc boinc    267942 Mar 19 08:50 log.48851223._000061.job.log.tgz.1
[2026-03-19 08:51:11] -rw------- 1 boinc boinc      6274 Mar 19 08:50 heartbeat.json
[2026-03-19 08:51:11] -rw-r--r-- 1 boinc boinc      8192 Mar 19 08:50 boinc_mmap_file
[2026-03-19 08:51:11] -rw-r--r-- 1 boinc boinc        27 Mar 19 08:50 wrapper_checkpoint.txt
[2026-03-19 08:51:11] -rw------- 1 boinc boinc      4748 Mar 19 08:51 pilotlog.txt
[2026-03-19 08:51:11] -rw------- 1 boinc boinc    885286 Mar 19 08:51 log.48851223._000061.job.log.1
[2026-03-19 08:51:11] -rw------- 1 boinc boinc       357 Mar 19 08:51 output.list
[2026-03-19 08:51:11] -rw-r--r-- 1 boinc boinc       620 Mar 19 08:51 runtime_log
[2026-03-19 08:51:11] -rw------- 1 boinc boinc   1167360 Mar 19 08:51 result.tar.gz
[2026-03-19 08:51:11] -rw-r--r-- 1 boinc boinc      8901 Mar 19 08:51 runtime_log.err
[2026-03-19 08:51:11] -rw------- 1 boinc boinc       658 Mar 19 08:51 XllLDmO1WH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmhhDLDmlaufZm.diag
[2026-03-19 08:51:11] -rw-r--r-- 1 boinc boinc      9638 Mar 19 08:51 stderr.txt
[2026-03-19 08:51:11] HITS file was successfully produced:
[2026-03-19 08:51:11] -rw------- 1 boinc boinc 204138273 Mar 19 08:50 shared/HITS.pool.root.1
[2026-03-19 08:51:11]  *** Contents of shared directory: ***
[2026-03-19 08:51:11] total 447528
[2026-03-19 08:51:11] -rw-r--r-- 2 boinc boinc 252335028 Mar 19 07:08 ATLAS.root_0
[2026-03-19 08:51:11] -rw-r--r-- 2 boinc boinc    597956 Mar 19 07:08 input.tar.gz
[2026-03-19 08:51:11] -rw-r--r-- 2 boinc boinc     15845 Mar 19 07:08 start_atlas.sh
[2026-03-19 08:51:11] -rw------- 1 boinc boinc 204138273 Mar 19 08:50 HITS.pool.root.1
[2026-03-19 08:51:11] -rw------- 1 boinc boinc   1167360 Mar 19 08:51 result.tar.gz
08:51:13 (4113195): run_atlas exited; CPU time 17293.726363
08:51:13 (4113195): called boinc_finish(0)

</stderr_txt>
]]>

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