Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
21:53:13 (2988466): wrapper (7.7.26015): starting
21:53:13 (2988466): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 21:53:13] Arguments: --nthreads 4
[2026-03-18 21:53:13] Threads: 4
[2026-03-18 21:53:13] Checking for CVMFS
[2026-03-18 21:53:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 21:53:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 21:53:14] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 21:53:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 21:53:14] 2.11.5.0 1613200 3581 75432 157436 2 50 2920003 4096001 6454 130560 0 4952212 99.995 118578 1144 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-18 21:53:14] CVMFS is ok
[2026-03-18 21:53:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 21:53:14] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-18 21:53:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-18 21:53:14] Further information can be found at the LHC@home message board.
[2026-03-18 21:53:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 21:53:14] Checking for apptainer binary...
[2026-03-18 21:53:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 21:53:14] Running /usr/bin/apptainer --version
[2026-03-18 21:53:14] apptainer version 1.4.5
[2026-03-18 21:53:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 21:53:14] x32-linux3
[2026-03-18 21:53:14] apptainer works
[2026-03-18 21:53:14] Set ATHENA_PROC_NUMBER=4
[2026-03-18 21:53:14] Set ATHENA_CORE_NUMBER=4
[2026-03-18 21:53:14] Starting ATLAS job with PandaID=7042037894
[2026-03-18 21:53:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 23:46:47]  *** The last 200 lines of the pilot log: ***
[2026-03-18 23:46:48] 2026-03-19 03:46:07,230 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 23:46:48] 2026-03-19 03:46:07,230 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 23:46:48] 2026-03-19 03:46:07,232 | INFO     | fitting pss+swap vs Time
[2026-03-18 23:46:48] 2026-03-19 03:46:07,232 | INFO     | sum of square deviations: 424045160.0
[2026-03-18 23:46:48] 2026-03-19 03:46:07,232 | INFO     | sum of deviations: -18469856574.000004
[2026-03-18 23:46:48] 2026-03-19 03:46:07,233 | INFO     | mean x: 1773888587.0
[2026-03-18 23:46:48] 2026-03-19 03:46:07,233 | INFO     | mean y: 2413776.5045045046
[2026-03-18 23:46:48] 2026-03-19 03:46:07,233 | INFO     | intersect: 77266514091.06894
[2026-03-18 23:46:48] 2026-03-19 03:46:07,233 | INFO     | chi2: 1.409239916182644
[2026-03-18 23:46:48] 2026-03-19 03:46:07,233 | INFO     | sum of square deviations: 369281342.5
[2026-03-18 23:46:48] 2026-03-19 03:46:07,233 | INFO     | sum of deviations: -17287981818.000004
[2026-03-18 23:46:48] 2026-03-19 03:46:07,234 | INFO     | mean x: 1773888434.5
[2026-03-18 23:46:48] 2026-03-19 03:46:07,234 | INFO     | mean y: 2417102.547169811
[2026-03-18 23:46:48] 2026-03-19 03:46:07,234 | INFO     | intersect: 83047368128.73254
[2026-03-18 23:46:48] 2026-03-19 03:46:07,234 | INFO     | chi2: 1.3953145343628242
[2026-03-18 23:46:48] 2026-03-19 03:46:07,234 | INFO     | current chi2=1.3953145343628242 (change=0.9881484096434828 %)
[2026-03-18 23:46:48] 2026-03-19 03:46:07,234 | INFO     | right removable region: 105
[2026-03-18 23:46:48] 2026-03-19 03:46:07,234 | INFO     | sum of square deviations: 369281342.5
[2026-03-18 23:46:48] 2026-03-19 03:46:07,234 | INFO     | sum of deviations: -27984569077.500004
[2026-03-18 23:46:48] 2026-03-19 03:46:07,235 | INFO     | mean x: 1773888739.5
[2026-03-18 23:46:48] 2026-03-19 03:46:07,235 | INFO     | mean y: 2439262.047169811
[2026-03-18 23:46:48] 2026-03-19 03:46:07,235 | INFO     | intersect: 134429788421.54921
[2026-03-18 23:46:48] 2026-03-19 03:46:07,235 | INFO     | chi2: 0.23836670233337173
[2026-03-18 23:46:48] 2026-03-19 03:46:07,235 | INFO     | current chi2=0.23836670233337173 (change=83.0854420460172 %)
[2026-03-18 23:46:48] 2026-03-19 03:46:07,235 | INFO     | sum of square deviations: 319447850.0
[2026-03-18 23:46:48] 2026-03-19 03:46:07,235 | INFO     | sum of deviations: -23850154601.000004
[2026-03-18 23:46:48] 2026-03-19 03:46:07,235 | INFO     | mean x: 1773888892.0
[2026-03-18 23:46:48] 2026-03-19 03:46:07,236 | INFO     | mean y: 2426589.881188119
[2026-03-18 23:46:48] 2026-03-19 03:46:07,236 | INFO     | intersect: 132441960364.16264
[2026-03-18 23:46:48] 2026-03-19 03:46:07,236 | INFO     | chi2: 0.2375360330016422
[2026-03-18 23:46:48] 2026-03-19 03:46:07,236 | INFO     | current chi2=0.2375360330016422 (change=0.34848379559649756 %)
[2026-03-18 23:46:48] 2026-03-19 03:46:07,236 | INFO     | left removable region: 20
[2026-03-18 23:46:48] 2026-03-19 03:46:07,236 | INFO     | sum of square deviations: 190403570.0
[2026-03-18 23:46:48] 2026-03-19 03:46:07,236 | INFO     | sum of deviations: -13959757402.0
[2026-03-18 23:46:48] 2026-03-19 03:46:07,236 | INFO     | mean x: 1773889014.0
[2026-03-18 23:46:48] 2026-03-19 03:46:07,236 | INFO     | mean y: 2398308.0
[2026-03-18 23:46:48] 2026-03-19 03:46:07,237 | INFO     | intersect: 130058049541.39326
[2026-03-18 23:46:48] 2026-03-19 03:46:07,237 | INFO     | chi2: 0.20160651820102599
[2026-03-18 23:46:48] 2026-03-19 03:46:07,237 | INFO     | current memory leak: -73.32 B/s (using 85 data points, chi2=0.20)
[2026-03-18 23:46:48] 2026-03-19 03:46:07,237 | INFO     | could have reported an average CPU frequency of 3906 MHz (7 samples)
[2026-03-18 23:46:48] 2026-03-19 03:46:07,237 | INFO     | ..............................
[2026-03-18 23:46:48] 2026-03-19 03:46:07,237 | INFO     | . Timing measurements:
[2026-03-18 23:46:48] 2026-03-19 03:46:07,237 | INFO     | . get job = 0 s
[2026-03-18 23:46:48] 2026-03-19 03:46:07,237 | INFO     | . initial setup = 5 s
[2026-03-18 23:46:48] 2026-03-19 03:46:07,237 | INFO     | . payload setup = 6 s
[2026-03-18 23:46:48] 2026-03-19 03:46:07,237 | INFO     | . stage-in = 0 s
[2026-03-18 23:46:48] 2026-03-19 03:46:07,237 | INFO     | . payload execution = 6734 s
[2026-03-18 23:46:48] 2026-03-19 03:46:07,238 | INFO     | . stage-out = 0 s
[2026-03-18 23:46:48] 2026-03-19 03:46:07,238 | INFO     | . log creation = 0 s
[2026-03-18 23:46:48] 2026-03-19 03:46:07,238 | INFO     | ..............................
[2026-03-18 23:46:48] 2026-03-19 03:46:07,301 | INFO     | 
[2026-03-18 23:46:48] 2026-03-19 03:46:07,301 | INFO     | job summary report
[2026-03-18 23:46:48] 2026-03-19 03:46:07,302 | INFO     | --------------------------------------------------
[2026-03-18 23:46:48] 2026-03-19 03:46:07,302 | INFO     | PanDA job id: 7042037894
[2026-03-18 23:46:48] 2026-03-19 03:46:07,302 | INFO     | task id: 48955010
[2026-03-18 23:46:48] 2026-03-19 03:46:07,302 | INFO     | errors: (none)
[2026-03-18 23:46:48] 2026-03-19 03:46:07,302 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 23:46:48] 2026-03-19 03:46:07,302 | INFO     | pilot state: finished 
[2026-03-18 23:46:48] 2026-03-19 03:46:07,302 | INFO     | transexitcode: 0
[2026-03-18 23:46:48] 2026-03-19 03:46:07,302 | INFO     | exeerrorcode: 0
[2026-03-18 23:46:48] 2026-03-19 03:46:07,302 | INFO     | exeerrordiag: 
[2026-03-18 23:46:48] 2026-03-19 03:46:07,302 | INFO     | exitcode: 0
[2026-03-18 23:46:48] 2026-03-19 03:46:07,302 | INFO     | exitmsg: OK
[2026-03-18 23:46:48] 2026-03-19 03:46:07,302 | INFO     | cpuconsumptiontime: 25673 s
[2026-03-18 23:46:48] 2026-03-19 03:46:07,303 | INFO     | nevents: 400
[2026-03-18 23:46:48] 2026-03-19 03:46:07,303 | INFO     | neventsw: 0
[2026-03-18 23:46:48] 2026-03-19 03:46:07,303 | INFO     | pid: 2997212
[2026-03-18 23:46:48] 2026-03-19 03:46:07,303 | INFO     | pgrp: 2997212
[2026-03-18 23:46:48] 2026-03-19 03:46:07,303 | INFO     | corecount: 4
[2026-03-18 23:46:48] 2026-03-19 03:46:07,303 | INFO     | event service: False
[2026-03-18 23:46:48] 2026-03-19 03:46:07,303 | INFO     | sizes: {0: 2280186, 11: 2280186, 6745: 2316428, 6746: 2316622}
[2026-03-18 23:46:48] 2026-03-19 03:46:07,303 | INFO     | --------------------------------------------------
[2026-03-18 23:46:48] 2026-03-19 03:46:07,303 | INFO     | 
[2026-03-18 23:46:48] 2026-03-19 03:46:07,303 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2026-03-18 23:46:48] 2026-03-19 03:46:07,318 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,318 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,319 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,319 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,319 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,319 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,319 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,319 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,319 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,319 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,319 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,319 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,319 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,319 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,319 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,319 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,319 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,320 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 23:46:48] 2026-03-19 03:46:07,320 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,320 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 23:46:48] 2026-03-19 03:46:07,320 | INFO     | job 7042037894 has completed (purged errors)
[2026-03-18 23:46:48] 2026-03-19 03:46:07,320 | INFO     | overall cleanup function is called
[2026-03-18 23:46:48] 2026-03-19 03:46:08,085 | INFO     | PID=2992646 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 23:46:48] 2026-03-19 03:46:08,085 | INFO     | .. there are 8 such processes running
[2026-03-18 23:46:48] 2026-03-19 03:46:08,328 | INFO     | --- collectZombieJob: --- 10, [2997212]
[2026-03-18 23:46:48] 2026-03-19 03:46:08,328 | INFO     | zombie collector waiting for pid 2997212
[2026-03-18 23:46:48] 2026-03-19 03:46:08,328 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 23:46:48] 2026-03-19 03:46:08,328 | INFO     | collected zombie processes
[2026-03-18 23:46:48] 2026-03-19 03:46:08,328 | INFO     | will attempt to kill all subprocesses of pid=2997212
[2026-03-18 23:46:48] 2026-03-19 03:46:08,462 | INFO     | process IDs to be killed: [2997212] (in reverse order)
[2026-03-18 23:46:48] 2026-03-19 03:46:08,512 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 23:46:48] 2026-03-19 03:46:08,512 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 23:46:48] 2026-03-19 03:46:08,516 | INFO     | did not find any defunct processes belonging to 2997212
[2026-03-18 23:46:48] 2026-03-19 03:46:08,520 | INFO     | did not find any defunct processes belonging to 2997212
[2026-03-18 23:46:48] 2026-03-19 03:46:08,520 | INFO     | ready for new job
[2026-03-18 23:46:48] 2026-03-19 03:46:08,520 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 23:46:48] 2026-03-19 03:46:08,521 | INFO     | **************************************
[2026-03-18 23:46:48] 2026-03-19 03:46:08,521 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-18 23:46:48] 2026-03-19 03:46:08,521 | INFO     | **************************************
[2026-03-18 23:46:48] 2026-03-19 03:46:08,522 | INFO     | 
[2026-03-18 23:46:48] 2026-03-19 03:46:08,542 | INFO     | architecture information:
[2026-03-18 23:46:48] 2026-03-19 03:46:08,542 | INFO     | executing command: cat /etc/os-release
[2026-03-18 23:46:48] 2026-03-19 03:46:08,553 | INFO     | cat /etc/os-release:
[2026-03-18 23:46:48] NAME="CentOS Linux"
[2026-03-18 23:46:48] VERSION="7 (Core)"
[2026-03-18 23:46:48] ID="centos"
[2026-03-18 23:46:48] ID_LIKE="rhel fedora"
[2026-03-18 23:46:48] VERSION_ID="7"
[2026-03-18 23:46:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 23:46:48] ANSI_COLOR="0;31"
[2026-03-18 23:46:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 23:46:48] HOME_URL="https://www.centos.org/"
[2026-03-18 23:46:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 23:46:48] 
[2026-03-18 23:46:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 23:46:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 23:46:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 23:46:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 23:46:48] 
[2026-03-18 23:46:48] 2026-03-19 03:46:08,554 | INFO     | **************************************
[2026-03-18 23:46:48] 2026-03-19 03:46:09,057 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2026-03-18 23:46:48] 2026-03-19 03:46:09,068 | INFO     | sufficient remaining disk space (389485166592 B)
[2026-03-18 23:46:48] 2026-03-19 03:46:09,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 23:46:48] 2026-03-19 03:46:09,068 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 23:46:48] 2026-03-19 03:46:09,068 | INFO     | update_server=False
[2026-03-18 23:46:48] 2026-03-19 03:46:09,068 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 23:46:48] 2026-03-19 03:46:09,069 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 23:46:48] 2026-03-19 03:46:09,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 23:46:48] 2026-03-19 03:46:09,069 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-18 23:46:48] 2026-03-19 03:46:09,069 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 23:46:48] 2026-03-19 03:46:09,069 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 23:46:48] 2026-03-19 03:46:09,069 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 23:46:48] 2026-03-19 03:46:09,391 | INFO     | all data control threads have been joined
[2026-03-18 23:46:48] 2026-03-19 03:46:09,472 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 23:46:48] 2026-03-19 03:46:09,579 | INFO     | all job control threads have been joined
[2026-03-18 23:46:48] 2026-03-19 03:46:10,072 | INFO     | [job] retrieve thread has finished
[2026-03-18 23:46:48] 2026-03-19 03:46:10,073 | INFO     | [job] validate thread has finished
[2026-03-18 23:46:48] 2026-03-19 03:46:10,074 | INFO     | [job] queue monitor thread has finished
[2026-03-18 23:46:48] 2026-03-19 03:46:10,092 | INFO     | [payload] validate_post thread has finished
[2026-03-18 23:46:48] 2026-03-19 03:46:10,148 | INFO     | all payload control threads have been joined
[2026-03-18 23:46:48] 2026-03-19 03:46:10,267 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 23:46:48] 2026-03-19 03:46:10,396 | INFO     | [data] control thread has finished
[2026-03-18 23:46:48] 2026-03-19 03:46:10,476 | INFO     | [data] copytool_in thread has finished
[2026-03-18 23:46:48] 2026-03-19 03:46:10,584 | INFO     | [job] control thread has finished
[2026-03-18 23:46:48] 2026-03-19 03:46:11,144 | INFO     | [payload] failed_post thread has finished
[2026-03-18 23:46:48] 2026-03-19 03:46:11,152 | INFO     | [payload] control thread has finished
[2026-03-18 23:46:48] 2026-03-19 03:46:11,344 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 23:46:48] 2026-03-19 03:46:11,429 | WARNING  | process 2997212 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 23:46:48] 2026-03-19 03:46:11,473 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 23:46:48] 2026-03-19 03:46:11,477 | INFO     | [data] copytool_out thread has finished
[2026-03-18 23:46:48] 2026-03-19 03:46:11,532 | INFO     | using path: /var/lib/boinc-client/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 23:46:48] 2026-03-19 03:46:11,532 | INFO     | using path: /var/lib/boinc-client/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 23:46:48] 2026-03-19 03:46:11,533 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-18 23:46:48] 2026-03-19 03:46:11,533 | WARNING  | maxPSS not found in memory monitor output
[2026-03-18 23:46:48] 2026-03-19 03:46:11,533 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/5/PanDA_Pilot-7042037894/payload.stdout) since it has not been created yet
[2026-03-18 23:46:48] 2026-03-19 03:46:11,533 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2026-03-18 23:46:48] 2026-03-19 03:46:11,545 | INFO     | sufficient remaining disk space (389485166592 B)
[2026-03-18 23:46:48] 2026-03-19 03:46:11,546 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-18 23:46:48] 2026-03-19 03:46:11,546 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/5/PanDA_Pilot-7042037894/HITS.48955010._022516.pool.root.1 since it does not exist
[2026-03-18 23:46:48] 2026-03-19 03:46:11,673 | INFO     | number of running child processes to parent process 2997212: 1
[2026-03-18 23:46:48] 2026-03-19 03:46:11,673 | INFO     | maximum number of monitored processes: 6
[2026-03-18 23:46:48] 2026-03-19 03:46:11,674 | INFO     | aborting job monitoring since job object (job id=7042037894) has expired
[2026-03-18 23:46:48] 2026-03-19 03:46:11,674 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 23:46:48] 2026-03-19 03:46:11,674 | INFO     | will abort loop
[2026-03-18 23:46:48] 2026-03-19 03:46:12,177 | INFO     | job.realtimelogging is not enabled
[2026-03-18 23:46:48] 2026-03-19 03:46:12,676 | INFO     | [job] job monitor thread has finished
[2026-03-18 23:46:48] 2026-03-19 03:46:13,076 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 23:46:48] 2026-03-19 03:46:13,177 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 23:46:48] 2026-03-19 03:46:40,684 | INFO     | [monitor] cgroup control has ended
[2026-03-18 23:46:48] 2026-03-19 03:46:42,780 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140683961227072)>', '<ExcThread(monitor, started 140683398608640)>']
[2026-03-18 23:46:48] 2026-03-19 03:46:43,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 23:46:48] 2026-03-19 03:46:43,229 | INFO     | [monitor] control thread has ended
[2026-03-18 23:46:48] 2026-03-19 03:46:47,804 | INFO     | all workflow threads have been joined
[2026-03-18 23:46:48] 2026-03-19 03:46:47,805 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 23:46:48] 2026-03-19 03:46:47,805 | INFO     | traces error code: 0
[2026-03-18 23:46:48] 2026-03-19 03:46:47,805 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 23:46:48] 2026-03-19 03:46:47,899 [wrapper] ==== pilot stdout END ====
[2026-03-18 23:46:48] 2026-03-19 03:46:47,900 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 23:46:48] 2026-03-19 03:46:47,902 [wrapper] pilotpid: 2992646
[2026-03-18 23:46:48] 2026-03-19 03:46:47,904 [wrapper] Pilot exit status: 0
[2026-03-18 23:46:48] 2026-03-19 03:46:47,911 [wrapper] pandaids: 7042037894
[2026-03-18 23:46:48] 2026-03-19 03:46:47,943 [wrapper] cleanup supervisor_pilot 3017248 2992647
[2026-03-18 23:46:48] 2026-03-19 03:46:47,945 [wrapper] Test setup, not cleaning
[2026-03-18 23:46:48] 2026-03-19 03:46:47,947 [wrapper] apfmon messages muted
[2026-03-18 23:46:48] 2026-03-19 03:46:47,949 [wrapper] ==== wrapper stdout END ====
[2026-03-18 23:46:48] 2026-03-19 03:46:47,951 [wrapper] ==== wrapper stderr END ====
[2026-03-18 23:46:48]  *** Error codes and diagnostics ***
[2026-03-18 23:46:48]     "exeErrorCode": 0,
[2026-03-18 23:46:48]     "exeErrorDiag": "",
[2026-03-18 23:46:48]     "pilotErrorCode": 0,
[2026-03-18 23:46:48]     "pilotErrorDiag": "",
[2026-03-18 23:46:48]  *** Listing of results directory ***
[2026-03-18 23:46:48] total 611308
[2026-03-18 23:46:48] -rw-r--r-- 1 boinc boinc    584627 Mar 10 00:09 pilot3.tar.gz
[2026-03-18 23:46:48] -rwx------ 1 boinc boinc     36322 Mar 10 00:13 runpilot2-wrapper.sh
[2026-03-18 23:46:48] -rw-r--r-- 1 boinc boinc      5111 Mar 10 00:14 queuedata.json
[2026-03-18 23:46:48] -rw-r--r-- 1 boinc boinc       100 Mar 18 21:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 23:46:48] -rwxr-xr-x 1 boinc boinc      7986 Mar 18 21:53 run_atlas
[2026-03-18 23:46:48] -rw-r--r-- 1 boinc boinc       105 Mar 18 21:53 job.xml
[2026-03-18 23:46:48] drwxrwx--x 2 boinc boinc      4096 Mar 18 21:53 shared
[2026-03-18 23:46:48] -rw-r--r-- 2 boinc boinc    597964 Mar 18 21:53 input.tar.gz
[2026-03-18 23:46:48] -rw-r--r-- 2 boinc boinc 439617841 Mar 18 21:53 EVNT.46701403._001447.pool.root.1
[2026-03-18 23:46:48] -rw-r--r-- 2 boinc boinc     15845 Mar 18 21:53 start_atlas.sh
[2026-03-18 23:46:48] -rw-r--r-- 1 boinc boinc      9156 Mar 18 21:53 init_data.xml
[2026-03-18 23:46:48] -rw-r--r-- 1 boinc boinc         0 Mar 18 21:53 boinc_setup_complete
[2026-03-18 23:46:48] -rw-r--r-- 1 boinc boinc         0 Mar 18 21:53 boinc_lockfile
[2026-03-18 23:46:48] -rw-r--r-- 1 boinc boinc      2563 Mar 18 21:53 pandaJob.out
[2026-03-18 23:46:48] -rw------- 1 boinc boinc   1010446 Mar 18 21:53 agis_schedconf.cvmfs.json
[2026-03-18 23:46:48] -rw------- 1 boinc boinc   1511579 Mar 18 21:53 agis_ddmendpoints.agis.ALL.json
[2026-03-18 23:46:48] -rw------- 1 boinc boinc       419 Mar 18 21:53 workernode_map.json
[2026-03-18 23:46:48] drwx------ 5 boinc boinc      4096 Mar 18 21:53 pilot3
[2026-03-18 23:46:48] -rw------- 1 boinc boinc        95 Mar 18 23:45 pilot_heartbeat.json
[2026-03-18 23:46:48] -rw-r--r-- 1 boinc boinc       530 Mar 18 23:45 boinc_task_state.xml
[2026-03-18 23:46:48] -rw------- 1 boinc boinc 179799531 Mar 18 23:45 HITS.48955010._022516.pool.root.1
[2026-03-18 23:46:48] -rw------- 1 boinc boinc      1014 Mar 18 23:46 memory_monitor_summary.json
[2026-03-18 23:46:48] -rw------- 1 boinc boinc    323980 Mar 18 23:46 log.48955010._022516.job.log.tgz.1
[2026-03-18 23:46:48] -rw------- 1 boinc boinc      6288 Mar 18 23:46 heartbeat.json
[2026-03-18 23:46:48] -rw-r--r-- 1 boinc boinc        27 Mar 18 23:46 wrapper_checkpoint.txt
[2026-03-18 23:46:48] -rw-r--r-- 1 boinc boinc      8192 Mar 18 23:46 boinc_mmap_file
[2026-03-18 23:46:48] -rw------- 1 boinc boinc      6149 Mar 18 23:46 pilotlog.txt
[2026-03-18 23:46:48] -rw------- 1 boinc boinc    984296 Mar 18 23:46 log.48955010._022516.job.log.1
[2026-03-18 23:46:48] -rw------- 1 boinc boinc       357 Mar 18 23:46 output.list
[2026-03-18 23:46:48] -rw-r--r-- 1 boinc boinc       620 Mar 18 23:46 runtime_log
[2026-03-18 23:46:48] -rw------- 1 boinc boinc   1320960 Mar 18 23:46 result.tar.gz
[2026-03-18 23:46:48] -rw------- 1 boinc boinc       644 Mar 18 23:46 wLoNDmCe3J9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmf1eLDmkAUVum.diag
[2026-03-18 23:46:48] -rw-r--r-- 1 boinc boinc      8891 Mar 18 23:46 runtime_log.err
[2026-03-18 23:46:48] -rw-r--r-- 1 boinc boinc     21556 Mar 18 23:46 stderr.txt
[2026-03-18 23:46:48] HITS file was successfully produced:
[2026-03-18 23:46:48] -rw------- 1 boinc boinc 179799531 Mar 18 23:45 shared/HITS.pool.root.1
[2026-03-18 23:46:48]  *** Contents of shared directory: ***
[2026-03-18 23:46:48] total 606804
[2026-03-18 23:46:48] -rw-r--r-- 2 boinc boinc    597964 Mar 18 21:53 input.tar.gz
[2026-03-18 23:46:48] -rw-r--r-- 2 boinc boinc 439617841 Mar 18 21:53 ATLAS.root_0
[2026-03-18 23:46:48] -rw-r--r-- 2 boinc boinc     15845 Mar 18 21:53 start_atlas.sh
[2026-03-18 23:46:48] -rw------- 1 boinc boinc 179799531 Mar 18 23:45 HITS.pool.root.1
[2026-03-18 23:46:48] -rw------- 1 boinc boinc   1320960 Mar 18 23:46 result.tar.gz
23:46:49 (2988466): run_atlas exited; CPU time 25755.015769
23:46:49 (2988466): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN