Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-18 10:30:20 (45924): vboxwrapper version 26210
2026-03-18 10:30:20 (45924): BOINC client version: 8.2.8
2026-03-18 10:30:21 (45924): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-03-18 10:30:21 (45924): Successfully copied 'init_data.xml' to the shared directory.
2026-03-18 10:30:21 (45924): Create VM. (boinc_6ff1645c9f48153b, slot#0)
2026-03-18 10:30:21 (45924): Setting Memory Size for VM. (4300MB)
2026-03-18 10:30:21 (45924): Setting CPU Count for VM. (3)
2026-03-18 10:30:21 (45924): Setting Chipset Options for VM.
2026-03-18 10:30:22 (45924): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-18 10:30:22 (45924): Setting Boot Options for VM.
2026-03-18 10:30:22 (45924): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-18 10:30:22 (45924): Enabling VM Network Access.
2026-03-18 10:30:22 (45924): Disabling USB Support for VM.
2026-03-18 10:30:23 (45924): Disabling COM Port Support for VM.
2026-03-18 10:30:23 (45924): Disabling LPT Port Support for VM.
2026-03-18 10:30:23 (45924): Disabling Audio Support for VM.
2026-03-18 10:30:23 (45924): Disabling Clipboard Support for VM.
2026-03-18 10:30:24 (45924): Disabling Drag and Drop Support for VM.
2026-03-18 10:30:24 (45924): Adding storage controller(s) to VM.
2026-03-18 10:30:24 (45924): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-18 10:30:25 (45924): Adding VirtualBox Guest Additions to VM.
2026-03-18 10:30:26 (45924): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-18 10:30:26 (45924): forwarding host port 41307 to guest port 80
2026-03-18 10:30:26 (45924): Enabling remote desktop for VM.
2026-03-18 10:30:26 (45924): Required extension pack not installed, remote desktop not enabled.
2026-03-18 10:30:26 (45924): Enabling shared directory for VM.
2026-03-18 10:30:26 (45924): Starting VM using VBoxManage interface. (boinc_6ff1645c9f48153b, slot#0)
2026-03-18 10:30:28 (45924): Successfully started VM. (PID = '46538')
2026-03-18 10:30:28 (45924): Reporting VM Process ID to BOINC.
2026-03-18 10:30:28 (45924): Guest Log: BIOS: VirtualBox 7.1.12
2026-03-18 10:30:28 (45924): Guest Log: CPUID EDX: 0x178bfbff
2026-03-18 10:30:28 (45924): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-18 10:30:28 (45924): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-18 10:30:28 (45924): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-18 10:30:28 (45924): Detected: Web Application Enabled (http://localhost:41307)
2026-03-18 10:30:28 (45924): Preference change detected
2026-03-18 10:30:28 (45924): Setting CPU throttle for VM. (100%)
2026-03-18 10:30:35 (45924): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-18 10:30:35 (45924): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-18 10:30:35 (45924): Guest Log: BIOS: Booting from Hard Disk...
2026-03-18 10:30:37 (45924): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-18 10:30:37 (45924): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-18 10:30:37 (45924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-18 10:30:50 (45924): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-18 10:30:50 (45924): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-18 10:31:11 (45924): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-18 10:31:11 (45924): Guest Log: 00:00:00.000366 main     Log opened 2026-03-18T17:31:10.371818000Z
2026-03-18 10:31:11 (45924): Guest Log: 00:00:00.000565 main     OS Product: Linux
2026-03-18 10:31:11 (45924): Guest Log: 00:00:00.000640 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-18 10:31:11 (45924): Guest Log: 00:00:00.000700 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-18 10:31:11 (45924): Guest Log: 00:00:00.000759 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-18 10:31:11 (45924): Guest Log: 00:00:00.000761 main     Process ID: 1314
2026-03-18 10:31:11 (45924): Guest Log: 00:00:00.000762 main     Package type: LINUX_64BITS_GENERIC
2026-03-18 10:31:11 (45924): Guest Log: 00:00:00.003345 main     5.2.32 r132073 started. Verbose level = 0
2026-03-18 10:31:12 (45924): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-18 10:31:12 (45924): Guest Log: [INFO] Mounting shared directory
2026-03-18 10:31:13 (45924): Guest Log: [INFO] Checking for init_data.xml
2026-03-18 10:31:46 (45924): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-18 10:31:46 (45924): Guest Log: [INFO] Detected branch: prod
2026-03-18 10:31:47 (45924): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-18 10:31:47 (45924): Guest Log: Copying input files
2026-03-18 10:31:48 (45924): Guest Log: Copied input files into RunAtlas.
2026-03-18 10:31:48 (45924): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-18 10:31:48 (45924): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-18 10:31:48 (45924): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-18 10:31:48 (45924): Guest Log: Further information can be found at the LHC@home message board.
2026-03-18 10:31:59 (45924): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-18 10:31:59 (45924): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-18 10:31:59 (45924): Guest Log: 2.6.3.0 1594 0 30160 157425 4 1 3117744 4096001 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-18 10:32:14 (45924): Guest Log: copied the webapp to /var/www
2026-03-18 10:32:14 (45924): Guest Log: ATHENA_PROC_NUMBER=3
2026-03-18 10:32:14 (45924): Guest Log: ATHENA_CORE_NUMBER=3
2026-03-18 10:32:16 (45924): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-18 10:32:16 (45924): Guest Log:  *** Starting ATLAS job. (PandaID=7058593368 taskID=49178257) ***
2026-03-18 10:38:18 (45924): VM state change detected. (old = 'running', new = 'paused')
2026-03-18 10:38:39 (45924): VM state change detected. (old = 'paused', new = 'running')
2026-03-18 10:39:28 (45924): VM state change detected. (old = 'running', new = 'paused')
2026-03-18 10:39:48 (45924): VM state change detected. (old = 'paused', new = 'running')
2026-03-18 10:49:45 (45924): VM state change detected. (old = 'running', new = 'paused')
2026-03-18 10:49:49 (45924): VM state change detected. (old = 'paused', new = 'running')
2026-03-18 12:10:36 (45924): Status Report: Elapsed Time: '6000.514656'
2026-03-18 12:10:36 (45924): Status Report: CPU Time: '11788.010000'
2026-03-18 13:49:41 (45924): Status Report: Elapsed Time: '12000.514656'
2026-03-18 13:49:41 (45924): Status Report: CPU Time: '28761.780000'
2026-03-18 15:28:44 (45924): Status Report: Elapsed Time: '18000.711539'
2026-03-18 15:28:45 (45924): Status Report: CPU Time: '46081.730000'
2026-03-18 17:07:50 (45924): Status Report: Elapsed Time: '24000.889297'
2026-03-18 17:07:50 (45924): Status Report: CPU Time: '62689.910000'
2026-03-18 18:46:55 (45924): Status Report: Elapsed Time: '30001.060965'
2026-03-18 18:46:55 (45924): Status Report: CPU Time: '79675.920000'
2026-03-18 20:26:02 (45924): Status Report: Elapsed Time: '36001.682951'
2026-03-18 20:26:02 (45924): Status Report: CPU Time: '96351.720000'
2026-03-18 20:38:51 (45924): VM state change detected. (old = 'running', new = 'paused')
2026-03-18 20:39:28 (45924): VM state change detected. (old = 'paused', new = 'running')
2026-03-18 20:40:07 (45924): Guest Log:  *** Job finished ***
2026-03-18 20:40:07 (45924): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:38:29,216 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:38:29,216 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:38:54,010 | INFO     | [monitor] cgroup control has ended
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:38:55,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140638939379520)>', '<ExcThread(monitor, started 140638360168192)>']
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:38:56,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:38:56,439 | INFO     | [monitor] control thread has ended
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:39:00,788 | INFO     | all workflow threads have been joined
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:39:00,788 | INFO     | end of generic workflow (traces error code: 0)
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:39:00,789 | INFO     | traces error code: 0
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:39:00,789 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:39:01,092 [wrapper] ==== pilot stdout END ====
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:39:01,110 [wrapper] ==== wrapper stdout RESUME ====
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:39:01,119 [wrapper] pilotpid: 6043
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:39:01,125 [wrapper] Pilot exit status: 0
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:39:03,414 [wrapper] pandaids: 7058593368
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:39:03,489 [wrapper] cleanup supervisor_pilot  2906 6044
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:39:03,510 [wrapper] Test setup, not cleaning
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:39:03,521 [wrapper] apfmon messages muted
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:39:03,530 [wrapper] ==== wrapper stdout END ====
2026-03-18 20:40:07 (45924): Guest Log: 2026-03-19 03:39:03,538 [wrapper] ==== wrapper stderr END ====
2026-03-18 20:40:07 (45924): Guest Log:  *** Error codes and diagnostics ***
2026-03-18 20:40:07 (45924): Guest Log:     "exeErrorCode": 0,
2026-03-18 20:40:07 (45924): Guest Log:     "exeErrorDiag": "",
2026-03-18 20:40:07 (45924): Guest Log:     "pilotErrorCode": 0,
2026-03-18 20:40:07 (45924): Guest Log:     "pilotErrorDiag": "",
2026-03-18 20:40:07 (45924): Guest Log:  *** Listing of results directory ***
2026-03-18 20:40:07 (45924): Guest Log: total 206532
2026-03-18 20:40:07 (45924): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 18 08:55 pilot3.tar.gz
2026-03-18 20:40:07 (45924): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 18 08:58 runpilot2-wrapper.sh
2026-03-18 20:40:07 (45924): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 18 09:01 queuedata.json
2026-03-18 20:40:07 (45924): Guest Log: -rw-r--r--. 1 atlas atlas    597531 Mar 18 17:31 input.tar.gz
2026-03-18 20:40:07 (45924): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Mar 18 17:31 start_atlas.sh
2026-03-18 20:40:07 (45924): Guest Log: -rw-r--r--. 1 atlas atlas      6099 Mar 18 17:31 init_data.xml
2026-03-18 20:40:07 (45924): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 18 17:31 EVNT.49128386._000007.pool.root.1 -> /data/./ATLAS.root_0
2026-03-18 20:40:07 (45924): Guest Log: -rw-r--r--. 1 atlas atlas      2590 Mar 18 17:32 pandaJob.out
2026-03-18 20:40:07 (45924): Guest Log: -rw-------. 1 atlas atlas       408 Mar 18 17:39 workernode_map.json
2026-03-18 20:40:07 (45924): Guest Log: -rw-------. 1 atlas atlas   1010024 Mar 18 17:40 agis_schedconf.cvmfs.json
2026-03-18 20:40:07 (45924): Guest Log: drwx------. 5 atlas atlas      4096 Mar 18 17:40 pilot3
2026-03-18 20:40:07 (45924): Guest Log: -rw-------. 1 atlas atlas 196375570 Mar 19 03:37 HITS.49178257._000161.pool.root.1
2026-03-18 20:40:07 (45924): Guest Log: -rw-------. 1 atlas atlas        95 Mar 19 03:37 pilot_heartbeat.json
2026-03-18 20:40:07 (45924): Guest Log: -rw-------. 1 atlas atlas      1029 Mar 19 03:37 memory_monitor_summary.json
2026-03-18 20:40:07 (45924): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 19 03:37 agis_ddmendpoints.agis.ALL.json
2026-03-18 20:40:07 (45924): Guest Log: -rw-------. 1 atlas atlas    677510 Mar 19 03:37 log.49178257._000161.job.log.tgz.1
2026-03-18 20:40:07 (45924): Guest Log: -rw-------. 1 atlas atlas      6307 Mar 19 03:37 heartbeat.json
2026-03-18 20:40:07 (45924): Guest Log: -rw-------. 1 atlas atlas      4801 Mar 19 03:39 pilotlog.txt
2026-03-18 20:40:07 (45924): Guest Log: -rw-------. 1 atlas atlas   4942946 Mar 19 03:39 log.49178257._000161.job.log.1
2026-03-18 20:40:07 (45924): Guest Log: -rw-------. 1 atlas atlas       357 Mar 19 03:39 output.list
2026-03-18 20:40:07 (45924): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 19 03:39 runtime_log
2026-03-18 20:40:07 (45924): Guest Log: -rw-------. 1 atlas atlas   5642240 Mar 19 03:39 result.tar.gz
2026-03-18 20:40:07 (45924): Guest Log: -rw-r--r--. 1 atlas atlas      8736 Mar 19 03:39 runtime_log.err
2026-03-18 20:40:07 (45924): Guest Log: -rw-------. 1 atlas atlas       658 Mar 19 03:39 AAALDmdu1M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmg4yLDmnUpQrm.diag
2026-03-18 20:40:07 (45924): Guest Log: Looking for outputfile HITS.49178257._000161.pool.root.1
2026-03-18 20:40:07 (45924): Guest Log: HITS file was successfully produced
2026-03-18 20:40:07 (45924): Guest Log: -rw-------. 1 atlas atlas 196375570 Mar 19 03:37 /home/atlas/RunAtlas/HITS.49178257._000161.pool.root.1
2026-03-18 20:40:08 (45924): Guest Log: Successfully finished the ATLAS job!
2026-03-18 20:40:08 (45924): Guest Log: Copying the results back to the shared directory!
2026-03-18 20:40:08 (45924): Guest Log:  *** Contents of shared directory: ***
2026-03-18 20:40:08 (45924): Guest Log: total 218236
2026-03-18 20:40:08 (45924): Guest Log: -rw-r--r--. 1 root root 217199822 Mar 18 17:30 ATLAS.root_0
2026-03-18 20:40:08 (45924): Guest Log: -rw-r--r--. 1 root root      6099 Mar 18 17:30 init_data.xml
2026-03-18 20:40:08 (45924): Guest Log: -rw-r--r--. 1 root root    597531 Mar 18 17:30 input.tar.gz
2026-03-18 20:40:08 (45924): Guest Log: -rw-r--r--. 1 root root   5642240 Mar 19  2026 result.tar.gz
2026-03-18 20:40:08 (45924): Guest Log: -rw-r--r--. 1 root root     15845 Mar 18 17:30 start_atlas.sh
2026-03-18 20:40:08 (45924): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-18 20:40:08 (45924): VM Completion File Detected.
2026-03-18 20:40:08 (45924): Powering off VM.
2026-03-18 20:40:11 (45924): Successfully stopped VM.
2026-03-18 20:40:11 (45924): Deregistering VM. (boinc_6ff1645c9f48153b, slot#0)
2026-03-18 20:40:11 (45924): Removing network bandwidth throttle group from VM.
2026-03-18 20:40:11 (45924): Removing VM from VirtualBox.
2026-03-18 20:40:17 (45924): called boinc_finish(0)

</stderr_txt>
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