Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:28:54 (1375466): wrapper (7.7.26015): starting
15:28:54 (1375466): wrapper: running run_atlas (--nthreads 12)
[2026-03-20 15:28:54] Arguments: --nthreads 12
[2026-03-20 15:28:54] Threads: 12
[2026-03-20 15:28:54] Checking for CVMFS
[2026-03-20 15:28:54] No cvmfs_config command found, will try listing directly
[2026-03-20 15:28:54] CVMFS is ok
[2026-03-20 15:28:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 15:28:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-20 15:28:54] Further information can be found at the LHC@home message board.
[2026-03-20 15:28:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 15:28:54] Checking for apptainer binary...
[2026-03-20 15:28:54] which: no apptainer in ((null))
[2026-03-20 15:28:54] apptainer is not installed, using version from CVMFS
[2026-03-20 15:28:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 15:28:54] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-20 15:28:54] apptainer works
[2026-03-20 15:28:54] Set ATHENA_PROC_NUMBER=12
[2026-03-20 15:28:54] Set ATHENA_CORE_NUMBER=12
[2026-03-20 15:28:54] Starting ATLAS job with PandaID=7058687766
[2026-03-20 15:28:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 16:56:27]  *** The last 200 lines of the pilot log: ***
[2026-03-20 16:56:27]  filetype=log
[2026-03-20 16:56:27]  guid=7c59941f-26f8-4393-9735-cd48d89f3e5c
[2026-03-20 16:56:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-20 16:56:27]  is_altstaged=None
[2026-03-20 16:56:27]  is_tar=False
[2026-03-20 16:56:27]  lfn=log.49178217._000312.job.log.tgz.1
[2026-03-20 16:56:27]  mtime=0
[2026-03-20 16:56:27]  protocol_id=None
[2026-03-20 16:56:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-20 16:56:27]  replicas=None
[2026-03-20 16:56:27]  scope=mc23_13p6TeV
[2026-03-20 16:56:27]  status=None
[2026-03-20 16:56:27]  status_code=0
[2026-03-20 16:56:27]  storage_token=
[2026-03-20 16:56:27]  surl=/var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7058687766/log.49178217._000312.job.log.tgz.1
[2026-03-20 16:56:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/5e/log.49178217._000312.job.log.tgz.1
[2026-03-20 16:56:27]  workdir=None
[2026-03-20 16:56:27] ]
[2026-03-20 16:56:27] 2026-03-20 15:55:09,938 | INFO     | transferring file log.49178217._000312.job.log.tgz.1 from /var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7058687766/log.49178217._000312.job.log.tgz.1 to /var/lib/
[2026-03-20 16:56:27] 2026-03-20 15:55:09,938 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7058687766/log.49178217._000312.job.log.tgz.1 /var/lib/boinc/var/slot216/slots/2/
[2026-03-20 16:56:27] 2026-03-20 15:55:09,954 | INFO     | adding to output.list: log.49178217._000312.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/5e/log.49178217._000312.job.log.tg
[2026-03-20 16:56:27] 2026-03-20 15:55:09,955 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-20 16:56:27] 2026-03-20 15:55:09,955 | INFO     | summary of transferred files:
[2026-03-20 16:56:27] 2026-03-20 15:55:09,955 | INFO     |  -- lfn=log.49178217._000312.job.log.tgz.1, status_code=0, status=transferred
[2026-03-20 16:56:27] 2026-03-20 15:55:09,955 | INFO     | stage-out finished correctly
[2026-03-20 16:56:27] 2026-03-20 15:55:10,500 | INFO     | time since job start (5163s) is within the limit (345600.0s)
[2026-03-20 16:56:27] 2026-03-20 15:55:10,656 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-20 16:56:27] 2026-03-20 15:55:10,958 | INFO     | monitor loop #379: job 0:7058687766 is in state 'finished'
[2026-03-20 16:56:27] 2026-03-20 15:55:10,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-20 16:56:27] 2026-03-20 15:55:12,506 | INFO     | time since job start (5165s) is within the limit (345600.0s)
[2026-03-20 16:56:27] 2026-03-20 15:55:12,951 | INFO     | job 7058687766 has state=finished
[2026-03-20 16:56:27] 2026-03-20 15:55:12,951 | INFO     | preparing for final server update for job 7058687766 in state='finished'
[2026-03-20 16:56:27] 2026-03-20 15:55:12,951 | INFO     | reading metadata from: /var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7058687766/jobReport.json
[2026-03-20 16:56:27] 2026-03-20 15:55:12,952 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot216/slots/2/workernode_map.json
[2026-03-20 16:56:27] 2026-03-20 15:55:12,953 | INFO     | this job has now completed (state=finished)
[2026-03-20 16:56:27] 2026-03-20 15:55:12,953 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-20 16:56:27] 2026-03-20 15:55:12,953 | INFO     | log transfer has been attempted: DONE
[2026-03-20 16:56:27] 2026-03-20 15:55:12,953 | INFO     | job 7058687766 has finished - writing final server update
[2026-03-20 16:56:27] 2026-03-20 15:55:12,953 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3281177/.job.ad'
[2026-03-20 16:56:27] 2026-03-20 15:55:12,953 | INFO     | total number of processed events: 400 (read)
[2026-03-20 16:56:27] 2026-03-20 15:55:12,971 | INFO     | using path: /var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7058687766/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 16:56:27] 2026-03-20 15:55:12,971 | INFO     | extracted standard info from prmon json
[2026-03-20 16:56:27] 2026-03-20 15:55:12,971 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 16:56:27] 2026-03-20 15:55:12,971 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 16:56:27] 2026-03-20 15:55:12,972 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 16:56:27] 2026-03-20 15:55:12,972 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 16:56:27] 2026-03-20 15:55:12,973 | INFO     | fitting pss+swap vs Time
[2026-03-20 16:56:27] 2026-03-20 15:55:12,973 | INFO     | sum of square deviations: 147126479.5
[2026-03-20 16:56:27] 2026-03-20 15:55:12,973 | INFO     | sum of deviations: -426636653.5
[2026-03-20 16:56:27] 2026-03-20 15:55:12,973 | INFO     | mean x: 1774019622.5
[2026-03-20 16:56:27] 2026-03-20 15:55:12,973 | INFO     | mean y: 2725452.730769231
[2026-03-20 16:56:27] 2026-03-20 15:55:12,973 | INFO     | intersect: 5147018971.877561
[2026-03-20 16:56:27] 2026-03-20 15:55:12,973 | INFO     | chi2: 0.00311388964826832
[2026-03-20 16:56:27] 2026-03-20 15:55:12,973 | INFO     | current memory leak: -2.90 B/s (using 78 data points, chi2=0.00)
[2026-03-20 16:56:27] 2026-03-20 15:55:12,974 | INFO     | could have reported an average CPU frequency of 3615 MHz (6 samples)
[2026-03-20 16:56:27] 2026-03-20 15:55:12,974 | INFO     | ..............................
[2026-03-20 16:56:27] 2026-03-20 15:55:12,974 | INFO     | . Timing measurements:
[2026-03-20 16:56:27] 2026-03-20 15:55:12,974 | INFO     | . get job = 0 s
[2026-03-20 16:56:27] 2026-03-20 15:55:12,974 | INFO     | . initial setup = 4 s
[2026-03-20 16:56:27] 2026-03-20 15:55:12,974 | INFO     | . payload setup = 6 s
[2026-03-20 16:56:27] 2026-03-20 15:55:12,974 | INFO     | . stage-in = 0 s
[2026-03-20 16:56:27] 2026-03-20 15:55:12,974 | INFO     | . payload execution = 5139 s
[2026-03-20 16:56:27] 2026-03-20 15:55:12,974 | INFO     | . stage-out = 0 s
[2026-03-20 16:56:27] 2026-03-20 15:55:12,974 | INFO     | . log creation = 0 s
[2026-03-20 16:56:27] 2026-03-20 15:55:12,974 | INFO     | ..............................
[2026-03-20 16:56:27] 2026-03-20 15:55:13,021 | INFO     | 
[2026-03-20 16:56:27] 2026-03-20 15:55:13,021 | INFO     | job summary report
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | --------------------------------------------------
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | PanDA job id: 7058687766
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | task id: 49178217
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | errors: (none)
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | pilot state: finished 
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | transexitcode: 0
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | exeerrorcode: 0
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | exeerrordiag: 
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | exitcode: 0
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | exitmsg: OK
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | cpuconsumptiontime: 56698 s
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | nevents: 400
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | neventsw: 0
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | pid: 1386934
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | pgrp: 1386934
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | corecount: 12
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | event service: False
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | sizes: {0: 2280194, 11: 2280194, 5150: 2306618, 5152: 2315696, 5155: 2315834}
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | --------------------------------------------------
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | 
[2026-03-20 16:56:27] 2026-03-20 15:55:13,022 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/2
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,039 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 16:56:27] 2026-03-20 15:55:13,040 | INFO     | job 7058687766 has completed (purged errors)
[2026-03-20 16:56:27] 2026-03-20 15:55:13,040 | INFO     | overall cleanup function is called
[2026-03-20 16:56:27] 2026-03-20 15:55:14,047 | INFO     | --- collectZombieJob: --- 10, [1386934]
[2026-03-20 16:56:27] 2026-03-20 15:55:14,047 | INFO     | zombie collector waiting for pid 1386934
[2026-03-20 16:56:27] 2026-03-20 15:55:14,047 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 16:56:27] 2026-03-20 15:55:14,047 | INFO     | collected zombie processes
[2026-03-20 16:56:27] 2026-03-20 15:55:14,047 | INFO     | will attempt to kill all subprocesses of pid=1386934
[2026-03-20 16:56:27] 2026-03-20 15:55:14,461 | INFO     | process IDs to be killed: [1386934] (in reverse order)
[2026-03-20 16:56:27] 2026-03-20 15:55:14,631 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 16:56:27] 2026-03-20 15:55:14,632 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 16:56:27] 2026-03-20 15:55:14,659 | INFO     | did not find any defunct processes belonging to 1386934
[2026-03-20 16:56:27] 2026-03-20 15:55:14,685 | INFO     | did not find any defunct processes belonging to 1386934
[2026-03-20 16:56:27] 2026-03-20 15:55:14,686 | INFO     | ready for new job
[2026-03-20 16:56:27] 2026-03-20 15:55:14,686 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 16:56:27] 2026-03-20 15:55:14,687 | INFO     | **************************************
[2026-03-20 16:56:27] 2026-03-20 15:55:14,687 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 16:56:27] 2026-03-20 15:55:14,687 | INFO     | **************************************
[2026-03-20 16:56:27] 2026-03-20 15:55:14,687 | INFO     | 
[2026-03-20 16:56:27] 2026-03-20 15:55:14,693 | INFO     | architecture information:
[2026-03-20 16:56:27] 2026-03-20 15:55:14,693 | INFO     | executing command: cat /etc/os-release
[2026-03-20 16:56:27] 2026-03-20 15:55:14,707 | INFO     | cat /etc/os-release:
[2026-03-20 16:56:27] NAME="CentOS Linux"
[2026-03-20 16:56:27] VERSION="7 (Core)"
[2026-03-20 16:56:27] ID="centos"
[2026-03-20 16:56:27] ID_LIKE="rhel fedora"
[2026-03-20 16:56:27] VERSION_ID="7"
[2026-03-20 16:56:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 16:56:27] ANSI_COLOR="0;31"
[2026-03-20 16:56:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 16:56:27] HOME_URL="https://www.centos.org/"
[2026-03-20 16:56:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 16:56:27] 
[2026-03-20 16:56:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 16:56:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 16:56:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 16:56:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 16:56:27] 
[2026-03-20 16:56:27] 2026-03-20 15:55:14,707 | INFO     | **************************************
[2026-03-20 16:56:27] 2026-03-20 15:55:15,210 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/2
[2026-03-20 16:56:27] 2026-03-20 15:55:15,227 | INFO     | sufficient remaining disk space (271199502336 B)
[2026-03-20 16:56:27] 2026-03-20 15:55:15,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 16:56:27] 2026-03-20 15:55:15,227 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 16:56:27] 2026-03-20 15:55:15,228 | INFO     | update_server=False
[2026-03-20 16:56:27] 2026-03-20 15:55:15,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 16:56:27] 2026-03-20 15:55:15,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 16:56:27] 2026-03-20 15:55:15,228 | INFO     | aborting loop
[2026-03-20 16:56:27] 2026-03-20 15:55:15,521 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 16:56:27] 2026-03-20 15:55:15,651 | INFO     | all data control threads have been joined
[2026-03-20 16:56:27] 2026-03-20 15:55:16,164 | INFO     | all payload control threads have been joined
[2026-03-20 16:56:27] 2026-03-20 15:55:16,233 | INFO     | [job] retrieve thread has finished
[2026-03-20 16:56:27] 2026-03-20 15:55:16,234 | INFO     | [job] job monitor thread has finished
[2026-03-20 16:56:27] 2026-03-20 15:55:16,251 | INFO     | [job] validate thread has finished
[2026-03-20 16:56:27] 2026-03-20 15:55:16,329 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 16:56:27] 2026-03-20 15:55:16,493 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 16:56:27] 2026-03-20 15:55:16,516 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 16:56:27] 2026-03-20 15:55:16,656 | INFO     | [data] control thread has finished
[2026-03-20 16:56:27] 2026-03-20 15:55:16,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 16:56:27] 2026-03-20 15:55:16,782 | INFO     | [data] copytool_in thread has finished
[2026-03-20 16:56:27] 2026-03-20 15:55:16,909 | INFO     | all job control threads have been joined
[2026-03-20 16:56:27] 2026-03-20 15:55:17,136 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 16:56:27] 2026-03-20 15:55:17,143 | INFO     | [payload] failed_post thread has finished
[2026-03-20 16:56:27] 2026-03-20 15:55:17,171 | INFO     | [payload] control thread has finished
[2026-03-20 16:56:27] 2026-03-20 15:55:17,443 | INFO     | [payload] validate_post thread has finished
[2026-03-20 16:56:27] 2026-03-20 15:55:17,526 | INFO     | [data] copytool_out thread has finished
[2026-03-20 16:56:27] 2026-03-20 15:55:17,914 | INFO     | [job] control thread has finished
[2026-03-20 16:56:27] 2026-03-20 15:55:18,032 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 16:56:27] 2026-03-20 15:55:19,037 | INFO     | [job] queue monitor thread has finished
[2026-03-20 16:56:27] 2026-03-20 15:55:20,718 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 16:56:27] 2026-03-20 15:55:46,086 | INFO     | PID=1380297 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-20 16:56:27] 2026-03-20 15:55:46,086 | INFO     | .. there are 10 such processes running
[2026-03-20 16:56:27] 2026-03-20 15:55:46,086 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 16:56:27] 2026-03-20 15:55:46,086 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 16:56:27] 2026-03-20 15:55:46,086 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 16:56:27] 2026-03-20 15:56:14,967 | INFO     | [monitor] cgroup control has ended
[2026-03-20 16:56:27] 2026-03-20 15:56:15,214 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23442156734272)>', '<ExcThread(monitor, started 23441918146304)>']
[2026-03-20 16:56:27] 2026-03-20 15:56:15,230 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 16:56:27] 2026-03-20 15:56:15,231 | INFO     | [monitor] control thread has ended
[2026-03-20 16:56:27] 2026-03-20 15:56:20,240 | INFO     | all workflow threads have been joined
[2026-03-20 16:56:27] 2026-03-20 15:56:20,240 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 16:56:27] 2026-03-20 15:56:20,240 | INFO     | traces error code: 0
[2026-03-20 16:56:27] 2026-03-20 15:56:20,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 16:56:27] 2026-03-20 15:56:20,406 [wrapper] ==== pilot stdout END ====
[2026-03-20 16:56:27] 2026-03-20 15:56:20,409 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 16:56:27] 2026-03-20 15:56:20,411 [wrapper] pilotpid: 1380297
[2026-03-20 16:56:27] 2026-03-20 15:56:20,413 [wrapper] Pilot exit status: 0
[2026-03-20 16:56:27] 2026-03-20 15:56:20,421 [wrapper] pandaids: 7058687766
[2026-03-20 16:56:27] 2026-03-20 15:56:20,550 [wrapper] cleanup supervisor_pilot 1635308 1380298
[2026-03-20 16:56:27] 2026-03-20 15:56:20,552 [wrapper] Test setup, not cleaning
[2026-03-20 16:56:27] 2026-03-20 15:56:20,555 [wrapper] apfmon messages muted
[2026-03-20 16:56:27] 2026-03-20 15:56:20,557 [wrapper] ==== wrapper stdout END ====
[2026-03-20 16:56:27] 2026-03-20 15:56:20,560 [wrapper] ==== wrapper stderr END ====
[2026-03-20 16:56:27]  *** Error codes and diagnostics ***
[2026-03-20 16:56:27]     "exeErrorCode": 0,
[2026-03-20 16:56:27]     "exeErrorDiag": "",
[2026-03-20 16:56:27]     "pilotErrorCode": 0,
[2026-03-20 16:56:27]     "pilotErrorDiag": "",
[2026-03-20 16:56:27]  *** Listing of results directory ***
[2026-03-20 16:56:27] total 488636
[2026-03-20 16:56:27] -rw-r--r--. 1 boinc boinc    585013 Mar 18 09:55 pilot3.tar.gz
[2026-03-20 16:56:27] -rwx------. 1 boinc boinc     36322 Mar 18 09:58 runpilot2-wrapper.sh
[2026-03-20 16:56:27] -rw-r--r--. 1 boinc boinc      5111 Mar 18 10:01 queuedata.json
[2026-03-20 16:56:27] -rw-r--r--. 1 boinc boinc       100 Mar 20 15:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 16:56:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar 20 15:28 run_atlas
[2026-03-20 16:56:27] -rw-r--r--. 1 boinc boinc       105 Mar 20 15:28 job.xml
[2026-03-20 16:56:27] -rw-r--r--. 1 boinc boinc      6711 Mar 20 15:28 init_data.xml
[2026-03-20 16:56:27] -rw-r--r--. 2 boinc boinc 245461135 Mar 20 15:28 EVNT.49128307._000015.pool.root.1
[2026-03-20 16:56:27] -rw-r--r--. 2 boinc boinc     15845 Mar 20 15:28 start_atlas.sh
[2026-03-20 16:56:27] drwxrwx--x. 2 boinc boinc      4096 Mar 20 15:28 shared
[2026-03-20 16:56:27] -rw-r--r--. 2 boinc boinc    597542 Mar 20 15:28 input.tar.gz
[2026-03-20 16:56:27] -rw-r--r--. 1 boinc boinc         0 Mar 20 15:28 boinc_lockfile
[2026-03-20 16:56:27] -rw-r--r--. 1 boinc boinc      2598 Mar 20 15:28 pandaJob.out
[2026-03-20 16:56:27] -rw-------. 1 boinc boinc   1010663 Mar 20 15:29 agis_schedconf.cvmfs.json
[2026-03-20 16:56:27] -rw-------. 1 boinc boinc   1511579 Mar 20 15:29 agis_ddmendpoints.agis.ALL.json
[2026-03-20 16:56:27] -rw-------. 1 boinc boinc       445 Mar 20 15:29 workernode_map.json
[2026-03-20 16:56:27] drwx------. 5 boinc boinc      4096 Mar 20 15:29 pilot3
[2026-03-20 16:56:27] -rw-r--r--. 1 boinc boinc       528 Mar 20 16:54 boinc_task_state.xml
[2026-03-20 16:56:27] -rw-------. 1 boinc boinc 248654690 Mar 20 16:54 HITS.49178217._000312.pool.root.1
[2026-03-20 16:56:27] -rw-------. 1 boinc boinc        95 Mar 20 16:54 pilot_heartbeat.json
[2026-03-20 16:56:27] -rw-------. 1 boinc boinc      1035 Mar 20 16:55 memory_monitor_summary.json
[2026-03-20 16:56:27] -rw-------. 1 boinc boinc    394659 Mar 20 16:55 log.49178217._000312.job.log.tgz.1
[2026-03-20 16:56:27] -rw-------. 1 boinc boinc      6360 Mar 20 16:55 heartbeat.json
[2026-03-20 16:56:27] -rw-r--r--. 1 boinc boinc        26 Mar 20 16:56 wrapper_checkpoint.txt
[2026-03-20 16:56:27] -rw-------. 1 boinc boinc      4831 Mar 20 16:56 pilotlog.txt
[2026-03-20 16:56:27] -rw-------. 1 boinc boinc    758183 Mar 20 16:56 log.49178217._000312.job.log.1
[2026-03-20 16:56:27] -rw-------. 1 boinc boinc       357 Mar 20 16:56 output.list
[2026-03-20 16:56:27] -rw-r--r--. 1 boinc boinc       620 Mar 20 16:56 runtime_log
[2026-03-20 16:56:27] -rw-------. 1 boinc boinc   1167360 Mar 20 16:56 result.tar.gz
[2026-03-20 16:56:27] -rw-r--r--. 1 boinc boinc      9223 Mar 20 16:56 runtime_log.err
[2026-03-20 16:56:27] -rw-------. 1 boinc boinc       663 Mar 20 16:56 57VLDmZu1M9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmWw1LDmlvqtMo.diag
[2026-03-20 16:56:27] -rw-r--r--. 1 boinc boinc      8192 Mar 20 16:56 boinc_mmap_file
[2026-03-20 16:56:27] -rw-r--r--. 1 boinc boinc     21165 Mar 20 16:56 stderr.txt
[2026-03-20 16:56:27] HITS file was successfully produced:
[2026-03-20 16:56:27] -rw-------. 1 boinc boinc 248654690 Mar 20 16:54 shared/HITS.pool.root.1
[2026-03-20 16:56:27]  *** Contents of shared directory: ***
[2026-03-20 16:56:27] total 484288
[2026-03-20 16:56:27] -rw-r--r--. 2 boinc boinc 245461135 Mar 20 15:28 ATLAS.root_0
[2026-03-20 16:56:27] -rw-r--r--. 2 boinc boinc     15845 Mar 20 15:28 start_atlas.sh
[2026-03-20 16:56:27] -rw-r--r--. 2 boinc boinc    597542 Mar 20 15:28 input.tar.gz
[2026-03-20 16:56:27] -rw-------. 1 boinc boinc 248654690 Mar 20 16:54 HITS.pool.root.1
[2026-03-20 16:56:27] -rw-------. 1 boinc boinc   1167360 Mar 20 16:56 result.tar.gz
16:56:28 (1375466): run_atlas exited; CPU time 56903.474868
16:56:28 (1375466): called boinc_finish(0)

</stderr_txt>
]]>

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