Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:26:36 (1058015): wrapper (7.7.26015): starting
17:26:36 (1058015): wrapper: running run_atlas (--nthreads 12)
[2026-03-19 17:26:36] Arguments: --nthreads 12
[2026-03-19 17:26:36] Threads: 12
[2026-03-19 17:26:36] Checking for CVMFS
[2026-03-19 17:26:36] No cvmfs_config command found, will try listing directly
[2026-03-19 17:26:36] CVMFS is ok
[2026-03-19 17:26:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 17:26:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 17:26:36] Further information can be found at the LHC@home message board.
[2026-03-19 17:26:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 17:26:36] Checking for apptainer binary...
[2026-03-19 17:26:36] which: no apptainer in ((null))
[2026-03-19 17:26:36] apptainer is not installed, using version from CVMFS
[2026-03-19 17:26:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 17:26:36] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-19 17:26:36] apptainer works
[2026-03-19 17:26:36] Set ATHENA_PROC_NUMBER=12
[2026-03-19 17:26:36] Set ATHENA_CORE_NUMBER=12
[2026-03-19 17:26:36] Starting ATLAS job with PandaID=7058663335
[2026-03-19 17:26:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 18:12:58]  *** The last 200 lines of the pilot log: ***
[2026-03-19 18:12:58]  protocol_id=None
[2026-03-19 18:12:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-19 18:12:58]  replicas=None
[2026-03-19 18:12:58]  scope=mc23_13p6TeV
[2026-03-19 18:12:58]  status=None
[2026-03-19 18:12:58]  status_code=0
[2026-03-19 18:12:58]  storage_token=
[2026-03-19 18:12:58]  surl=/var/lib/boinc/var/slot72/slots/2/PanDA_Pilot-7058663335/log.49179868._000115.job.log.tgz.1
[2026-03-19 18:12:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/25/log.49179868._000115.job.log.tgz.1
[2026-03-19 18:12:58]  workdir=None
[2026-03-19 18:12:58] ]
[2026-03-19 18:12:58] 2026-03-19 17:12:19,647 | INFO     | transferring file log.49179868._000115.job.log.tgz.1 from /var/lib/boinc/var/slot72/slots/2/PanDA_Pilot-7058663335/log.49179868._000115.job.log.tgz.1 to /var/lib/b
[2026-03-19 18:12:58] 2026-03-19 17:12:19,647 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot72/slots/2/PanDA_Pilot-7058663335/log.49179868._000115.job.log.tgz.1 /var/lib/boinc/var/slot72/slots/2/lo
[2026-03-19 18:12:58] 2026-03-19 17:12:19,662 | INFO     | adding to output.list: log.49179868._000115.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/25/log.49179868._000115.job.log.tg
[2026-03-19 18:12:58] 2026-03-19 17:12:19,662 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-19 18:12:58] 2026-03-19 17:12:19,662 | INFO     | summary of transferred files:
[2026-03-19 18:12:58] 2026-03-19 17:12:19,662 | INFO     |  -- lfn=log.49179868._000115.job.log.tgz.1, status_code=0, status=transferred
[2026-03-19 18:12:58] 2026-03-19 17:12:19,662 | INFO     | stage-out finished correctly
[2026-03-19 18:12:58] 2026-03-19 17:12:19,917 | INFO     | monitor loop #205: job 0:7058663335 is in state 'finished'
[2026-03-19 18:12:58] 2026-03-19 17:12:19,917 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-19 18:12:58] 2026-03-19 17:12:20,237 | INFO     | time since job start (2733s) is within the limit (345600.0s)
[2026-03-19 18:12:58] 2026-03-19 17:12:22,243 | INFO     | time since job start (2735s) is within the limit (345600.0s)
[2026-03-19 18:12:58] 2026-03-19 17:12:22,420 | INFO     | monitor loop #206: job 0:7058663335 is in state 'finished'
[2026-03-19 18:12:58] 2026-03-19 17:12:22,420 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-19 18:12:58] 2026-03-19 17:12:22,953 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-19 18:12:58] 2026-03-19 17:12:24,248 | INFO     | time since job start (2737s) is within the limit (345600.0s)
[2026-03-19 18:12:58] 2026-03-19 17:12:24,923 | INFO     | monitor loop #207: job 0:7058663335 is in state 'finished'
[2026-03-19 18:12:58] 2026-03-19 17:12:24,923 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-19 18:12:58] 2026-03-19 17:12:25,394 | INFO     | job 7058663335 has state=finished
[2026-03-19 18:12:58] 2026-03-19 17:12:25,394 | INFO     | preparing for final server update for job 7058663335 in state='finished'
[2026-03-19 18:12:58] 2026-03-19 17:12:25,394 | INFO     | reading metadata from: /var/lib/boinc/var/slot72/slots/2/PanDA_Pilot-7058663335/jobReport.json
[2026-03-19 18:12:58] 2026-03-19 17:12:25,396 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot72/slots/2/workernode_map.json
[2026-03-19 18:12:58] 2026-03-19 17:12:25,396 | INFO     | this job has now completed (state=finished)
[2026-03-19 18:12:58] 2026-03-19 17:12:25,396 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 18:12:58] 2026-03-19 17:12:25,396 | INFO     | log transfer has been attempted: DONE
[2026-03-19 18:12:58] 2026-03-19 17:12:25,396 | INFO     | job 7058663335 has finished - writing final server update
[2026-03-19 18:12:58] 2026-03-19 17:12:25,397 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3870688/.job.ad'
[2026-03-19 18:12:58] 2026-03-19 17:12:25,397 | INFO     | total number of processed events: 400 (read)
[2026-03-19 18:12:58] 2026-03-19 17:12:25,414 | INFO     | using path: /var/lib/boinc/var/slot72/slots/2/PanDA_Pilot-7058663335/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 18:12:58] 2026-03-19 17:12:25,414 | INFO     | extracted standard info from prmon json
[2026-03-19 18:12:58] 2026-03-19 17:12:25,414 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 18:12:58] 2026-03-19 17:12:25,414 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 18:12:58] 2026-03-19 17:12:25,414 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 18:12:58] 2026-03-19 17:12:25,414 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 18:12:58] 2026-03-19 17:12:25,415 | INFO     | fitting pss+swap vs Time
[2026-03-19 18:12:58] 2026-03-19 17:12:25,415 | INFO     | sum of square deviations: 17003109.5
[2026-03-19 18:12:58] 2026-03-19 17:12:25,415 | INFO     | sum of deviations: 233015638.5
[2026-03-19 18:12:58] 2026-03-19 17:12:25,415 | INFO     | mean x: 1773939061.5
[2026-03-19 18:12:58] 2026-03-19 17:12:25,415 | INFO     | mean y: 2697487.6578947366
[2026-03-19 18:12:58] 2026-03-19 17:12:25,415 | INFO     | intersect: -24307887765.91077
[2026-03-19 18:12:58] 2026-03-19 17:12:25,415 | INFO     | chi2: 0.00043093229178436384
[2026-03-19 18:12:58] 2026-03-19 17:12:25,416 | INFO     | current memory leak: 13.70 B/s (using 38 data points, chi2=0.00)
[2026-03-19 18:12:58] 2026-03-19 17:12:25,416 | INFO     | could have reported an average CPU frequency of 3629 MHz (5 samples)
[2026-03-19 18:12:58] 2026-03-19 17:12:25,416 | INFO     | ..............................
[2026-03-19 18:12:58] 2026-03-19 17:12:25,416 | INFO     | . Timing measurements:
[2026-03-19 18:12:58] 2026-03-19 17:12:25,416 | INFO     | . get job = 0 s
[2026-03-19 18:12:58] 2026-03-19 17:12:25,416 | INFO     | . initial setup = 4 s
[2026-03-19 18:12:58] 2026-03-19 17:12:25,416 | INFO     | . payload setup = 5 s
[2026-03-19 18:12:58] 2026-03-19 17:12:25,416 | INFO     | . stage-in = 0 s
[2026-03-19 18:12:58] 2026-03-19 17:12:25,416 | INFO     | . payload execution = 2714 s
[2026-03-19 18:12:58] 2026-03-19 17:12:25,416 | INFO     | . stage-out = 0 s
[2026-03-19 18:12:58] 2026-03-19 17:12:25,416 | INFO     | . log creation = 0 s
[2026-03-19 18:12:58] 2026-03-19 17:12:25,416 | INFO     | ..............................
[2026-03-19 18:12:58] 2026-03-19 17:12:25,462 | INFO     | 
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | job summary report
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | --------------------------------------------------
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | PanDA job id: 7058663335
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | task id: 49179868
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | errors: (none)
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | pilot state: finished 
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | transexitcode: 0
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | exeerrorcode: 0
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | exeerrordiag: 
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | exitcode: 0
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | exitmsg: OK
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | cpuconsumptiontime: 29385 s
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | nevents: 400
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | neventsw: 0
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | pid: 1068361
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | pgrp: 1068361
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | corecount: 12
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | event service: False
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | sizes: {0: 2279965, 1: 2280170, 11: 2280198, 2721: 2314596, 2725: 2314596, 2727: 2314822}
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | --------------------------------------------------
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | 
[2026-03-19 18:12:58] 2026-03-19 17:12:25,463 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/2
[2026-03-19 18:12:58] 2026-03-19 17:12:25,478 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,478 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,478 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,478 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | job 7058663335 has completed (purged errors)
[2026-03-19 18:12:58] 2026-03-19 17:12:25,479 | INFO     | overall cleanup function is called
[2026-03-19 18:12:58] 2026-03-19 17:12:26,486 | INFO     | --- collectZombieJob: --- 10, [1068361]
[2026-03-19 18:12:58] 2026-03-19 17:12:26,487 | INFO     | zombie collector waiting for pid 1068361
[2026-03-19 18:12:58] 2026-03-19 17:12:26,487 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 18:12:58] 2026-03-19 17:12:26,487 | INFO     | collected zombie processes
[2026-03-19 18:12:58] 2026-03-19 17:12:26,487 | INFO     | will attempt to kill all subprocesses of pid=1068361
[2026-03-19 18:12:58] 2026-03-19 17:12:26,823 | INFO     | process IDs to be killed: [1068361] (in reverse order)
[2026-03-19 18:12:58] 2026-03-19 17:12:26,959 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 18:12:58] 2026-03-19 17:12:26,960 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 18:12:58] 2026-03-19 17:12:26,982 | INFO     | did not find any defunct processes belonging to 1068361
[2026-03-19 18:12:58] 2026-03-19 17:12:27,003 | INFO     | did not find any defunct processes belonging to 1068361
[2026-03-19 18:12:58] 2026-03-19 17:12:27,004 | INFO     | ready for new job
[2026-03-19 18:12:58] 2026-03-19 17:12:27,004 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 18:12:58] 2026-03-19 17:12:27,005 | INFO     | **************************************
[2026-03-19 18:12:58] 2026-03-19 17:12:27,005 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 18:12:58] 2026-03-19 17:12:27,005 | INFO     | **************************************
[2026-03-19 18:12:58] 2026-03-19 17:12:27,005 | INFO     | 
[2026-03-19 18:12:58] 2026-03-19 17:12:27,011 | INFO     | architecture information:
[2026-03-19 18:12:58] 2026-03-19 17:12:27,011 | INFO     | executing command: cat /etc/os-release
[2026-03-19 18:12:58] 2026-03-19 17:12:27,021 | INFO     | cat /etc/os-release:
[2026-03-19 18:12:58] NAME="CentOS Linux"
[2026-03-19 18:12:58] VERSION="7 (Core)"
[2026-03-19 18:12:58] ID="centos"
[2026-03-19 18:12:58] ID_LIKE="rhel fedora"
[2026-03-19 18:12:58] VERSION_ID="7"
[2026-03-19 18:12:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 18:12:58] ANSI_COLOR="0;31"
[2026-03-19 18:12:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 18:12:58] HOME_URL="https://www.centos.org/"
[2026-03-19 18:12:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 18:12:58] 
[2026-03-19 18:12:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 18:12:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 18:12:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 18:12:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 18:12:58] 
[2026-03-19 18:12:58] 2026-03-19 17:12:27,021 | INFO     | **************************************
[2026-03-19 18:12:58] 2026-03-19 17:12:27,524 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/2
[2026-03-19 18:12:58] 2026-03-19 17:12:27,536 | INFO     | sufficient remaining disk space (268787777536 B)
[2026-03-19 18:12:58] 2026-03-19 17:12:27,537 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 18:12:58] 2026-03-19 17:12:27,537 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 18:12:58] 2026-03-19 17:12:27,537 | INFO     | update_server=False
[2026-03-19 18:12:58] 2026-03-19 17:12:27,537 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 18:12:58] 2026-03-19 17:12:27,720 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 18:12:58] 2026-03-19 17:12:28,082 | INFO     | all payload control threads have been joined
[2026-03-19 18:12:58] 2026-03-19 17:12:28,432 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 18:12:58] 2026-03-19 17:12:28,432 | INFO     | aborting loop
[2026-03-19 18:12:58] 2026-03-19 17:12:28,542 | INFO     | [job] retrieve thread has finished
[2026-03-19 18:12:58] 2026-03-19 17:12:28,613 | INFO     | all data control threads have been joined
[2026-03-19 18:12:58] 2026-03-19 17:12:28,930 | INFO     | all job control threads have been joined
[2026-03-19 18:12:58] 2026-03-19 17:12:29,006 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 18:12:58] 2026-03-19 17:12:29,088 | INFO     | [payload] control thread has finished
[2026-03-19 18:12:58] 2026-03-19 17:12:29,094 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 18:12:58] 2026-03-19 17:12:29,309 | INFO     | [job] validate thread has finished
[2026-03-19 18:12:58] 2026-03-19 17:12:29,375 | INFO     | [payload] failed_post thread has finished
[2026-03-19 18:12:58] 2026-03-19 17:12:29,437 | INFO     | [job] job monitor thread has finished
[2026-03-19 18:12:58] 2026-03-19 17:12:29,507 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 18:12:58] 2026-03-19 17:12:29,515 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 18:12:58] 2026-03-19 17:12:29,614 | INFO     | [data] control thread has finished
[2026-03-19 18:12:58] 2026-03-19 17:12:29,670 | INFO     | [data] copytool_in thread has finished
[2026-03-19 18:12:58] 2026-03-19 17:12:29,726 | INFO     | [data] copytool_out thread has finished
[2026-03-19 18:12:58] 2026-03-19 17:12:29,821 | INFO     | [payload] validate_post thread has finished
[2026-03-19 18:12:58] 2026-03-19 17:12:29,934 | INFO     | [job] control thread has finished
[2026-03-19 18:12:58] 2026-03-19 17:12:30,473 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 18:12:58] 2026-03-19 17:12:31,478 | INFO     | [job] queue monitor thread has finished
[2026-03-19 18:12:58] 2026-03-19 17:12:33,011 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 18:12:58] 2026-03-19 17:12:38,199 | INFO     | job.realtimelogging is not enabled
[2026-03-19 18:12:58] 2026-03-19 17:12:39,204 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 18:12:58] 2026-03-19 17:12:51,298 | INFO     | [monitor] cgroup control has ended
[2026-03-19 18:12:58] 2026-03-19 17:12:51,391 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22539472111424)>', '<ExcThread(monitor, started 22539226314496)>']
[2026-03-19 18:12:58] 2026-03-19 17:12:56,417 | INFO     | all workflow threads have been joined
[2026-03-19 18:12:58] 2026-03-19 17:12:56,417 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 18:12:58] 2026-03-19 17:12:56,417 | INFO     | traces error code: 0
[2026-03-19 18:12:58] 2026-03-19 17:12:56,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 18:12:58] 2026-03-19 17:12:57,750 | INFO     | PID=1062568 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 18:12:58] 2026-03-19 17:12:57,750 | INFO     | .. there are 9 such processes running
[2026-03-19 18:12:58] 2026-03-19 17:12:57,751 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 18:12:58] 2026-03-19 17:12:57,751 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 18:12:58] 2026-03-19 17:12:57,751 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 18:12:58] 2026-03-19 17:12:57,752 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 18:12:58] 2026-03-19 17:12:57,752 | CRITICAL | thread 'MainThread' is not alive
[2026-03-19 18:12:58] 2026-03-19 17:12:57,752 | INFO     | [monitor] control thread has ended
[2026-03-19 18:12:58] 2026-03-19 17:12:57,910 [wrapper] ==== pilot stdout END ====
[2026-03-19 18:12:58] 2026-03-19 17:12:57,912 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 18:12:58] 2026-03-19 17:12:57,914 [wrapper] pilotpid: 1062568
[2026-03-19 18:12:58] 2026-03-19 17:12:57,916 [wrapper] Pilot exit status: 0
[2026-03-19 18:12:58] 2026-03-19 17:12:57,923 [wrapper] pandaids: 7058663335
[2026-03-19 18:12:58] 2026-03-19 17:12:58,021 [wrapper] cleanup supervisor_pilot 1233034 1062569
[2026-03-19 18:12:58] 2026-03-19 17:12:58,023 [wrapper] Test setup, not cleaning
[2026-03-19 18:12:58] 2026-03-19 17:12:58,025 [wrapper] apfmon messages muted
[2026-03-19 18:12:58] 2026-03-19 17:12:58,028 [wrapper] ==== wrapper stdout END ====
[2026-03-19 18:12:58] 2026-03-19 17:12:58,029 [wrapper] ==== wrapper stderr END ====
[2026-03-19 18:12:58]  *** Error codes and diagnostics ***
[2026-03-19 18:12:58]     "exeErrorCode": 0,
[2026-03-19 18:12:58]     "exeErrorDiag": "",
[2026-03-19 18:12:58]     "pilotErrorCode": 0,
[2026-03-19 18:12:58]     "pilotErrorDiag": "",
[2026-03-19 18:12:58]  *** Listing of results directory ***
[2026-03-19 18:12:58] total 409332
[2026-03-19 18:12:58] -rw-r--r--. 1 boinc boinc    585013 Mar 18 09:55 pilot3.tar.gz
[2026-03-19 18:12:58] -rwx------. 1 boinc boinc     36322 Mar 18 09:56 runpilot2-wrapper.sh
[2026-03-19 18:12:58] -rw-r--r--. 1 boinc boinc      5111 Mar 18 09:59 queuedata.json
[2026-03-19 18:12:58] -rw-r--r--. 1 boinc boinc       100 Mar 19 17:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 18:12:58] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 17:26 run_atlas
[2026-03-19 18:12:58] -rw-r--r--. 1 boinc boinc       105 Mar 19 17:26 job.xml
[2026-03-19 18:12:58] -rw-r--r--. 1 boinc boinc      6709 Mar 19 17:26 init_data.xml
[2026-03-19 18:12:58] -rw-r--r--. 2 boinc boinc 219618587 Mar 19 17:26 EVNT.49132308._000007.pool.root.1
[2026-03-19 18:12:58] -rw-r--r--. 2 boinc boinc     15845 Mar 19 17:26 start_atlas.sh
[2026-03-19 18:12:58] drwxrwx--x. 2 boinc boinc      4096 Mar 19 17:26 shared
[2026-03-19 18:12:58] -rw-r--r--. 2 boinc boinc    597537 Mar 19 17:26 input.tar.gz
[2026-03-19 18:12:58] -rw-r--r--. 1 boinc boinc         0 Mar 19 17:26 boinc_lockfile
[2026-03-19 18:12:58] -rw-r--r--. 1 boinc boinc      2584 Mar 19 17:26 pandaJob.out
[2026-03-19 18:12:58] -rw-------. 1 boinc boinc   1010732 Mar 19 17:26 agis_schedconf.cvmfs.json
[2026-03-19 18:12:58] -rw-------. 1 boinc boinc   1511579 Mar 19 17:26 agis_ddmendpoints.agis.ALL.json
[2026-03-19 18:12:58] -rw-------. 1 boinc boinc       443 Mar 19 17:26 workernode_map.json
[2026-03-19 18:12:58] drwx------. 5 boinc boinc      4096 Mar 19 17:26 pilot3
[2026-03-19 18:12:58] -rw-------. 1 boinc boinc 194033901 Mar 19 18:11 HITS.49179868._000115.pool.root.1
[2026-03-19 18:12:58] -rw-r--r--. 1 boinc boinc       529 Mar 19 18:12 boinc_task_state.xml
[2026-03-19 18:12:58] -rw-------. 1 boinc boinc      1021 Mar 19 18:12 memory_monitor_summary.json
[2026-03-19 18:12:58] -rw-------. 1 boinc boinc    361700 Mar 19 18:12 log.49179868._000115.job.log.tgz.1
[2026-03-19 18:12:58] -rw-------. 1 boinc boinc      6342 Mar 19 18:12 heartbeat.json
[2026-03-19 18:12:58] -rw-r--r--. 1 boinc boinc      8192 Mar 19 18:12 boinc_mmap_file
[2026-03-19 18:12:58] -rw-r--r--. 1 boinc boinc        27 Mar 19 18:12 wrapper_checkpoint.txt
[2026-03-19 18:12:58] -rw-------. 1 boinc boinc       892 Mar 19 18:12 pilotlog.txt
[2026-03-19 18:12:58] -rw-------. 1 boinc boinc        95 Mar 19 18:12 pilot_heartbeat.json
[2026-03-19 18:12:58] -rw-------. 1 boinc boinc    429577 Mar 19 18:12 log.49179868._000115.job.log.1
[2026-03-19 18:12:58] -rw-------. 1 boinc boinc       357 Mar 19 18:12 output.list
[2026-03-19 18:12:58] -rw-r--r--. 1 boinc boinc       620 Mar 19 18:12 runtime_log
[2026-03-19 18:12:58] -rw-------. 1 boinc boinc    808960 Mar 19 18:12 result.tar.gz
[2026-03-19 18:12:58] -rw-r--r--. 1 boinc boinc      9206 Mar 19 18:12 runtime_log.err
[2026-03-19 18:12:58] -rw-------. 1 boinc boinc       663 Mar 19 18:12 6AxKDmds1M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmJ1yLDmQtIKIo.diag
[2026-03-19 18:12:58] -rw-r--r--. 1 boinc boinc      4136 Mar 19 18:12 stderr.txt
[2026-03-19 18:12:58] HITS file was successfully produced:
[2026-03-19 18:12:58] -rw-------. 1 boinc boinc 194033901 Mar 19 18:11 shared/HITS.pool.root.1
[2026-03-19 18:12:58]  *** Contents of shared directory: ***
[2026-03-19 18:12:58] total 405360
[2026-03-19 18:12:58] -rw-r--r--. 2 boinc boinc 219618587 Mar 19 17:26 ATLAS.root_0
[2026-03-19 18:12:58] -rw-r--r--. 2 boinc boinc     15845 Mar 19 17:26 start_atlas.sh
[2026-03-19 18:12:58] -rw-r--r--. 2 boinc boinc    597537 Mar 19 17:26 input.tar.gz
[2026-03-19 18:12:58] -rw-------. 1 boinc boinc 194033901 Mar 19 18:11 HITS.pool.root.1
[2026-03-19 18:12:58] -rw-------. 1 boinc boinc    808960 Mar 19 18:12 result.tar.gz
18:12:59 (1058015): run_atlas exited; CPU time 29466.772085
18:12:59 (1058015): called boinc_finish(0)

</stderr_txt>
]]>

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