Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:21:44 (23259): wrapper (7.7.26015): starting
12:21:44 (23259): wrapper: running run_atlas (--nthreads 12)
[2026-03-18 12:21:44] Arguments: --nthreads 12
[2026-03-18 12:21:44] Threads: 12
[2026-03-18 12:21:44] Checking for CVMFS
[2026-03-18 12:21:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 12:21:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 12:21:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 12:21:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 12:21:44] 2.11.2.0 2998 264908 100388 157424 2 49 17026892 20275201 1 130560 0 110703857 99.945 12798881 30656 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-18 12:21:44] CVMFS is ok
[2026-03-18 12:21:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 12:21:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 12:21:44] Further information can be found at the LHC@home message board.
[2026-03-18 12:21:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 12:21:44] Checking for apptainer binary...
[2026-03-18 12:21:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 12:21:44] Running /usr/bin/apptainer --version
[2026-03-18 12:21:44] apptainer version 1.3.2-1.el7
[2026-03-18 12:21:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 12:21:46] c-205-12.aglt2.org
[2026-03-18 12:21:46] apptainer works
[2026-03-18 12:21:46] Set ATHENA_PROC_NUMBER=12
[2026-03-18 12:21:46] Set ATHENA_CORE_NUMBER=12
[2026-03-18 12:21:46] Starting ATLAS job with PandaID=7058498909
[2026-03-18 12:21:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 14:35:27]  *** The last 200 lines of the pilot log: ***
[2026-03-18 14:35:27] 2026-03-18 18:34:24,625 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7058498909/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 14:35:27] 2026-03-18 18:34:24,625 | INFO     | extracted standard info from prmon json
[2026-03-18 14:35:27] 2026-03-18 18:34:24,625 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 14:35:27] 2026-03-18 18:34:24,626 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 14:35:27] 2026-03-18 18:34:24,626 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 14:35:27] 2026-03-18 18:34:24,626 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 14:35:27] 2026-03-18 18:34:24,628 | INFO     | fitting pss+swap vs Time
[2026-03-18 14:35:27] 2026-03-18 18:34:24,629 | INFO     | sum of square deviations: 681212772.5
[2026-03-18 14:35:27] 2026-03-18 18:34:24,629 | INFO     | sum of deviations: 9020832.500002146
[2026-03-18 14:35:27] 2026-03-18 18:34:24,629 | INFO     | mean x: 1773854893.5
[2026-03-18 14:35:27] 2026-03-18 18:34:24,630 | INFO     | mean y: 2756247.5923076924
[2026-03-18 14:35:27] 2026-03-18 18:34:24,630 | INFO     | intersect: -20733693.465091735
[2026-03-18 14:35:27] 2026-03-18 18:34:24,630 | INFO     | chi2: 1.8107463943774804
[2026-03-18 14:35:27] 2026-03-18 18:34:24,630 | INFO     | sum of square deviations: 605592750.0
[2026-03-18 14:35:27] 2026-03-18 18:34:24,631 | INFO     | sum of deviations: 781672300.0000024
[2026-03-18 14:35:27] 2026-03-18 18:34:24,631 | INFO     | mean x: 1773854741.0
[2026-03-18 14:35:27] 2026-03-18 18:34:24,631 | INFO     | mean y: 2757806.536
[2026-03-18 14:35:27] 2026-03-18 18:34:24,631 | INFO     | intersect: -2286855329.1288157
[2026-03-18 14:35:27] 2026-03-18 18:34:24,631 | INFO     | chi2: 1.8131662574252887
[2026-03-18 14:35:27] 2026-03-18 18:34:24,631 | INFO     | current chi2=1.8131662574252887 (change=-0.13363898198677393 %)
[2026-03-18 14:35:27] 2026-03-18 18:34:24,632 | INFO     | right removable region: 124
[2026-03-18 14:35:27] 2026-03-18 18:34:24,632 | INFO     | sum of square deviations: 605592750.0
[2026-03-18 14:35:27] 2026-03-18 18:34:24,632 | INFO     | sum of deviations: -23860715470.000008
[2026-03-18 14:35:27] 2026-03-18 18:34:24,632 | INFO     | mean x: 1773855046.0
[2026-03-18 14:35:27] 2026-03-18 18:34:24,633 | INFO     | mean y: 2803677.792
[2026-03-18 14:35:27] 2026-03-18 18:34:24,633 | INFO     | intersect: 69893750254.72803
[2026-03-18 14:35:27] 2026-03-18 18:34:24,633 | INFO     | chi2: 0.1749847454469613
[2026-03-18 14:35:27] 2026-03-18 18:34:24,633 | INFO     | current chi2=0.1749847454469613 (change=90.33631954257628 %)
[2026-03-18 14:35:27] 2026-03-18 18:34:24,633 | INFO     | sum of square deviations: 535786790.0
[2026-03-18 14:35:27] 2026-03-18 18:34:24,634 | INFO     | sum of deviations: -26584402131.0
[2026-03-18 14:35:27] 2026-03-18 18:34:24,634 | INFO     | mean x: 1773855198.5
[2026-03-18 14:35:27] 2026-03-18 18:34:24,634 | INFO     | mean y: 2809448.0166666666
[2026-03-18 14:35:27] 2026-03-18 18:34:24,634 | INFO     | intersect: 88017073329.15645
[2026-03-18 14:35:27] 2026-03-18 18:34:24,634 | INFO     | chi2: 0.09543728465925641
[2026-03-18 14:35:27] 2026-03-18 18:34:24,634 | INFO     | current chi2=0.09543728465925641 (change=45.45965454561072 %)
[2026-03-18 14:35:27] 2026-03-18 18:34:24,635 | INFO     | sum of square deviations: 471562330.0
[2026-03-18 14:35:27] 2026-03-18 18:34:24,635 | INFO     | sum of deviations: -24255743296.0
[2026-03-18 14:35:27] 2026-03-18 18:34:24,635 | INFO     | mean x: 1773855351.0
[2026-03-18 14:35:27] 2026-03-18 18:34:24,635 | INFO     | mean y: 2803898.9913043478
[2026-03-18 14:35:27] 2026-03-18 18:34:24,636 | INFO     | intersect: 91244570471.16847
[2026-03-18 14:35:27] 2026-03-18 18:34:24,636 | INFO     | chi2: 0.09390354443373197
[2026-03-18 14:35:27] 2026-03-18 18:34:24,636 | INFO     | current chi2=0.09390354443373197 (change=1.607066075905672 %)
[2026-03-18 14:35:27] 2026-03-18 18:34:24,636 | INFO     | left removable region: 30
[2026-03-18 14:35:27] 2026-03-18 18:34:24,636 | INFO     | sum of square deviations: 257521107.5
[2026-03-18 14:35:27] 2026-03-18 18:34:24,637 | INFO     | sum of deviations: -13742658097.000002
[2026-03-18 14:35:27] 2026-03-18 18:34:24,637 | INFO     | mean x: 1773855625.5
[2026-03-18 14:35:27] 2026-03-18 18:34:24,637 | INFO     | mean y: 2780765.595744681
[2026-03-18 14:35:27] 2026-03-18 18:34:24,637 | INFO     | intersect: 94664890645.99295
[2026-03-18 14:35:27] 2026-03-18 18:34:24,637 | INFO     | chi2: 0.08564801992095593
[2026-03-18 14:35:27] 2026-03-18 18:34:24,637 | INFO     | current memory leak: -53.37 B/s (using 94 data points, chi2=0.09)
[2026-03-18 14:35:27] 2026-03-18 18:34:24,638 | INFO     | could have reported an average CPU frequency of 1773 MHz (8 samples)
[2026-03-18 14:35:27] 2026-03-18 18:34:24,638 | INFO     | ..............................
[2026-03-18 14:35:27] 2026-03-18 18:34:24,638 | INFO     | . Timing measurements:
[2026-03-18 14:35:27] 2026-03-18 18:34:24,638 | INFO     | . get job = 0 s
[2026-03-18 14:35:27] 2026-03-18 18:34:24,638 | INFO     | . initial setup = 7 s
[2026-03-18 14:35:27] 2026-03-18 18:34:24,638 | INFO     | . payload setup = 13 s
[2026-03-18 14:35:27] 2026-03-18 18:34:24,638 | INFO     | . stage-in = 0 s
[2026-03-18 14:35:27] 2026-03-18 18:34:24,638 | INFO     | . payload execution = 7904 s
[2026-03-18 14:35:27] 2026-03-18 18:34:24,638 | INFO     | . stage-out = 0 s
[2026-03-18 14:35:27] 2026-03-18 18:34:24,639 | INFO     | . log creation = 0 s
[2026-03-18 14:35:27] 2026-03-18 18:34:24,639 | INFO     | ..............................
[2026-03-18 14:35:27] 2026-03-18 18:34:24,716 | INFO     | 
[2026-03-18 14:35:27] 2026-03-18 18:34:24,716 | INFO     | job summary report
[2026-03-18 14:35:27] 2026-03-18 18:34:24,716 | INFO     | --------------------------------------------------
[2026-03-18 14:35:27] 2026-03-18 18:34:24,717 | INFO     | PanDA job id: 7058498909
[2026-03-18 14:35:27] 2026-03-18 18:34:24,717 | INFO     | task id: 49190685
[2026-03-18 14:35:27] 2026-03-18 18:34:24,717 | INFO     | errors: (none)
[2026-03-18 14:35:27] 2026-03-18 18:34:24,717 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 14:35:27] 2026-03-18 18:34:24,717 | INFO     | pilot state: finished 
[2026-03-18 14:35:27] 2026-03-18 18:34:24,717 | INFO     | transexitcode: 0
[2026-03-18 14:35:27] 2026-03-18 18:34:24,718 | INFO     | exeerrorcode: 0
[2026-03-18 14:35:27] 2026-03-18 18:34:24,718 | INFO     | exeerrordiag: 
[2026-03-18 14:35:27] 2026-03-18 18:34:24,718 | INFO     | exitcode: 0
[2026-03-18 14:35:27] 2026-03-18 18:34:24,718 | INFO     | exitmsg: OK
[2026-03-18 14:35:27] 2026-03-18 18:34:24,718 | INFO     | cpuconsumptiontime: 86479 s
[2026-03-18 14:35:27] 2026-03-18 18:34:24,718 | INFO     | nevents: 400
[2026-03-18 14:35:27] 2026-03-18 18:34:24,718 | INFO     | neventsw: 0
[2026-03-18 14:35:27] 2026-03-18 18:34:24,719 | INFO     | pid: 31387
[2026-03-18 14:35:27] 2026-03-18 18:34:24,719 | INFO     | pgrp: 31387
[2026-03-18 14:35:27] 2026-03-18 18:34:24,719 | INFO     | corecount: 12
[2026-03-18 14:35:27] 2026-03-18 18:34:24,719 | INFO     | event service: False
[2026-03-18 14:35:27] 2026-03-18 18:34:24,719 | INFO     | sizes: {0: 2280138, 11: 2280138, 7922: 2307921, 7923: 2316919, 7924: 2316975, 7925: 2317169}
[2026-03-18 14:35:27] 2026-03-18 18:34:24,719 | INFO     | --------------------------------------------------
[2026-03-18 14:35:27] 2026-03-18 18:34:24,720 | INFO     | 
[2026-03-18 14:35:27] 2026-03-18 18:34:24,720 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-18 14:35:27] 2026-03-18 18:34:24,746 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,747 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,747 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,747 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,747 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,747 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,747 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,748 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,748 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,748 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,748 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,748 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,748 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,749 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,749 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,749 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,749 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 14:35:27] 2026-03-18 18:34:24,749 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,750 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 14:35:27] 2026-03-18 18:34:24,750 | INFO     | job 7058498909 has completed (purged errors)
[2026-03-18 14:35:27] 2026-03-18 18:34:24,750 | INFO     | overall cleanup function is called
[2026-03-18 14:35:27] 2026-03-18 18:34:25,758 | INFO     | --- collectZombieJob: --- 10, [31387]
[2026-03-18 14:35:27] 2026-03-18 18:34:25,758 | INFO     | zombie collector waiting for pid 31387
[2026-03-18 14:35:27] 2026-03-18 18:34:25,758 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 14:35:27] 2026-03-18 18:34:25,758 | INFO     | collected zombie processes
[2026-03-18 14:35:27] 2026-03-18 18:34:25,759 | INFO     | will attempt to kill all subprocesses of pid=31387
[2026-03-18 14:35:27] 2026-03-18 18:34:25,845 | INFO     | process IDs to be killed: [31387] (in reverse order)
[2026-03-18 14:35:27] 2026-03-18 18:34:25,895 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 14:35:27] 2026-03-18 18:34:25,896 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 14:35:27] 2026-03-18 18:34:25,899 | INFO     | did not find any defunct processes belonging to 31387
[2026-03-18 14:35:27] 2026-03-18 18:34:25,902 | INFO     | did not find any defunct processes belonging to 31387
[2026-03-18 14:35:27] 2026-03-18 18:34:25,902 | INFO     | ready for new job
[2026-03-18 14:35:27] 2026-03-18 18:34:25,902 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 14:35:27] 2026-03-18 18:34:25,904 | INFO     | **************************************
[2026-03-18 14:35:27] 2026-03-18 18:34:25,904 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 14:35:27] 2026-03-18 18:34:25,904 | INFO     | **************************************
[2026-03-18 14:35:27] 2026-03-18 18:34:25,904 | INFO     | 
[2026-03-18 14:35:27] 2026-03-18 18:34:25,905 | INFO     | architecture information:
[2026-03-18 14:35:27] 2026-03-18 18:34:25,905 | INFO     | executing command: cat /etc/os-release
[2026-03-18 14:35:27] 2026-03-18 18:34:25,921 | INFO     | cat /etc/os-release:
[2026-03-18 14:35:27] NAME="CentOS Linux"
[2026-03-18 14:35:27] VERSION="7 (Core)"
[2026-03-18 14:35:27] ID="centos"
[2026-03-18 14:35:27] ID_LIKE="rhel fedora"
[2026-03-18 14:35:27] VERSION_ID="7"
[2026-03-18 14:35:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 14:35:27] ANSI_COLOR="0;31"
[2026-03-18 14:35:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 14:35:27] HOME_URL="https://www.centos.org/"
[2026-03-18 14:35:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 14:35:27] 
[2026-03-18 14:35:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 14:35:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 14:35:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 14:35:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 14:35:27] 
[2026-03-18 14:35:27] 2026-03-18 18:34:25,921 | INFO     | **************************************
[2026-03-18 14:35:27] 2026-03-18 18:34:26,368 | WARNING  | process 31387 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 14:35:27] 2026-03-18 18:34:26,427 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-18 14:35:27] 2026-03-18 18:34:26,445 | INFO     | sufficient remaining disk space (29210181632 B)
[2026-03-18 14:35:27] 2026-03-18 18:34:26,445 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 14:35:27] 2026-03-18 18:34:26,445 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 14:35:27] 2026-03-18 18:34:26,445 | INFO     | update_server=False
[2026-03-18 14:35:27] 2026-03-18 18:34:26,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 14:35:27] 2026-03-18 18:34:26,446 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 14:35:27] 2026-03-18 18:34:26,447 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 14:35:27] 2026-03-18 18:34:26,453 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 14:35:27] 2026-03-18 18:34:26,541 | INFO     | number of running child processes to parent process 31387: 1
[2026-03-18 14:35:27] 2026-03-18 18:34:26,541 | INFO     | maximum number of monitored processes: 6
[2026-03-18 14:35:27] 2026-03-18 18:34:26,541 | INFO     | aborting job monitoring since job object (job id=7058498909) has expired
[2026-03-18 14:35:27] 2026-03-18 18:34:26,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 14:35:27] 2026-03-18 18:34:26,541 | INFO     | will abort loop
[2026-03-18 14:35:27] 2026-03-18 18:34:27,037 | INFO     | all data control threads have been joined
[2026-03-18 14:35:27] 2026-03-18 18:34:27,451 | INFO     | [job] retrieve thread has finished
[2026-03-18 14:35:27] 2026-03-18 18:34:27,452 | INFO     | [job] queue monitor thread has finished
[2026-03-18 14:35:27] 2026-03-18 18:34:27,515 | INFO     | all job control threads have been joined
[2026-03-18 14:35:27] 2026-03-18 18:34:27,531 | INFO     | [data] copytool_in thread has finished
[2026-03-18 14:35:27] 2026-03-18 18:34:27,547 | INFO     | [job] job monitor thread has finished
[2026-03-18 14:35:27] 2026-03-18 18:34:27,691 | INFO     | [payload] validate_post thread has finished
[2026-03-18 14:35:27] 2026-03-18 18:34:27,701 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 14:35:27] 2026-03-18 18:34:27,946 | INFO     | all payload control threads have been joined
[2026-03-18 14:35:27] 2026-03-18 18:34:28,043 | INFO     | [data] control thread has finished
[2026-03-18 14:35:27] 2026-03-18 18:34:28,153 | INFO     | [job] validate thread has finished
[2026-03-18 14:35:27] 2026-03-18 18:34:28,195 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 14:35:27] 2026-03-18 18:34:28,196 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 14:35:27] 2026-03-18 18:34:28,453 | INFO     | [data] copytool_out thread has finished
[2026-03-18 14:35:27] 2026-03-18 18:34:28,521 | INFO     | [job] control thread has finished
[2026-03-18 14:35:27] 2026-03-18 18:34:28,789 | INFO     | [payload] failed_post thread has finished
[2026-03-18 14:35:27] 2026-03-18 18:34:28,822 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 14:35:27] 2026-03-18 18:34:28,951 | INFO     | [payload] control thread has finished
[2026-03-18 14:35:27] 2026-03-18 18:34:29,893 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 14:35:27] 2026-03-18 18:34:33,899 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 14:35:27] 2026-03-18 18:34:56,820 | INFO     | PID=26950 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 14:35:27] 2026-03-18 18:34:56,821 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 14:35:27] 2026-03-18 18:34:56,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 14:35:27] 2026-03-18 18:34:56,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 14:35:27] 2026-03-18 18:35:20,693 | INFO     | [monitor] cgroup control has ended
[2026-03-18 14:35:27] 2026-03-18 18:35:22,166 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139922522978112)>', '<ExcThread(monitor, started 139922082084608)>']
[2026-03-18 14:35:27] 2026-03-18 18:35:22,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 14:35:27] 2026-03-18 18:35:22,949 | INFO     | [monitor] control thread has ended
[2026-03-18 14:35:27] 2026-03-18 18:35:27,192 | INFO     | all workflow threads have been joined
[2026-03-18 14:35:27] 2026-03-18 18:35:27,192 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 14:35:27] 2026-03-18 18:35:27,192 | INFO     | traces error code: 0
[2026-03-18 14:35:27] 2026-03-18 18:35:27,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 14:35:27] 2026-03-18 18:35:27,295 [wrapper] ==== pilot stdout END ====
[2026-03-18 14:35:27] 2026-03-18 18:35:27,298 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 14:35:27] 2026-03-18 18:35:27,302 [wrapper] pilotpid: 26950
[2026-03-18 14:35:27] 2026-03-18 18:35:27,306 [wrapper] Pilot exit status: 0
[2026-03-18 14:35:27] 2026-03-18 18:35:27,323 [wrapper] pandaids: 7058498909
[2026-03-18 14:35:27] 2026-03-18 18:35:27,370 [wrapper] cleanup supervisor_pilot 31794 26951
[2026-03-18 14:35:27] 2026-03-18 18:35:27,374 [wrapper] Test setup, not cleaning
[2026-03-18 14:35:27] 2026-03-18 18:35:27,378 [wrapper] apfmon messages muted
[2026-03-18 14:35:27] 2026-03-18 18:35:27,382 [wrapper] ==== wrapper stdout END ====
[2026-03-18 14:35:27] 2026-03-18 18:35:27,386 [wrapper] ==== wrapper stderr END ====
[2026-03-18 14:35:27]  *** Error codes and diagnostics ***
[2026-03-18 14:35:27]     "exeErrorCode": 0,
[2026-03-18 14:35:27]     "exeErrorDiag": "",
[2026-03-18 14:35:27]     "pilotErrorCode": 0,
[2026-03-18 14:35:27]     "pilotErrorDiag": "",
[2026-03-18 14:35:27]  *** Listing of results directory ***
[2026-03-18 14:35:27] total 487960
[2026-03-18 14:35:27] -rw-r--r-- 1 boincer umatlas    585013 Mar 18 04:55 pilot3.tar.gz
[2026-03-18 14:35:27] -rwx------ 1 boincer umatlas     36322 Mar 18 04:55 runpilot2-wrapper.sh
[2026-03-18 14:35:27] -rw-r--r-- 1 boincer umatlas      5111 Mar 18 04:56 queuedata.json
[2026-03-18 14:35:27] -rw-r--r-- 1 boincer umatlas       100 Mar 18 12:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 14:35:27] -rwxr-xr-x 1 boincer umatlas      7986 Mar 18 12:21 run_atlas
[2026-03-18 14:35:27] -rw-r--r-- 1 boincer umatlas       105 Mar 18 12:21 job.xml
[2026-03-18 14:35:27] -rw-r--r-- 2 boincer umatlas 263556113 Mar 18 12:21 EVNT.49124304._000001.pool.root.1
[2026-03-18 14:35:27] -rw-r--r-- 2 boincer umatlas     15845 Mar 18 12:21 start_atlas.sh
[2026-03-18 14:35:27] drwxrwx--x 2 boincer umatlas      4096 Mar 18 12:21 shared
[2026-03-18 14:35:27] -rw-r--r-- 2 boincer umatlas    597536 Mar 18 12:21 input.tar.gz
[2026-03-18 14:35:27] -rw-r--r-- 1 boincer umatlas         0 Mar 18 12:21 boinc_lockfile
[2026-03-18 14:35:27] -rw-r--r-- 1 boincer umatlas      2570 Mar 18 12:21 pandaJob.out
[2026-03-18 14:35:27] -rw------- 1 boincer umatlas        57 Mar 18 12:21 setup.sh.local
[2026-03-18 14:35:27] -rw------- 1 boincer umatlas   1011280 Mar 18 12:22 agis_schedconf.cvmfs.json
[2026-03-18 14:35:27] -rw------- 1 boincer umatlas   1511579 Mar 18 12:22 agis_ddmendpoints.agis.ALL.json
[2026-03-18 14:35:27] -rw------- 1 boincer umatlas       445 Mar 18 12:22 workernode_map.json
[2026-03-18 14:35:27] drwx------ 5 boincer umatlas      4096 Mar 18 12:22 pilot3
[2026-03-18 14:35:27] -rw-r--r-- 1 boincer umatlas      5953 Mar 18 14:27 init_data.xml
[2026-03-18 14:35:27] -rw------- 1 boincer umatlas 229076040 Mar 18 14:33 HITS.49190685._000013.pool.root.1
[2026-03-18 14:35:27] -rw-r--r-- 1 boincer umatlas       529 Mar 18 14:33 boinc_task_state.xml
[2026-03-18 14:35:27] -rw------- 1 boincer umatlas      1048 Mar 18 14:34 memory_monitor_summary.json
[2026-03-18 14:35:27] -rw------- 1 boincer umatlas    431345 Mar 18 14:34 log.49190685._000013.job.log.tgz.1
[2026-03-18 14:35:27] -rw------- 1 boincer umatlas      6413 Mar 18 14:34 heartbeat.json
[2026-03-18 14:35:27] -rw------- 1 boincer umatlas        95 Mar 18 14:34 pilot_heartbeat.json
[2026-03-18 14:35:27] -rw-r--r-- 1 boincer umatlas      8192 Mar 18 14:34 boinc_mmap_file
[2026-03-18 14:35:27] -rw-r--r-- 1 boincer umatlas        27 Mar 18 14:35 wrapper_checkpoint.txt
[2026-03-18 14:35:27] -rw------- 1 boincer umatlas      5259 Mar 18 14:35 pilotlog.txt
[2026-03-18 14:35:27] -rw------- 1 boincer umatlas   1121286 Mar 18 14:35 log.49190685._000013.job.log.1
[2026-03-18 14:35:27] -rw------- 1 boincer umatlas       357 Mar 18 14:35 output.list
[2026-03-18 14:35:27] -rw-r--r-- 1 boincer umatlas       620 Mar 18 14:35 runtime_log
[2026-03-18 14:35:27] -rw------- 1 boincer umatlas   1566720 Mar 18 14:35 result.tar.gz
[2026-03-18 14:35:27] -rw------- 1 boincer umatlas       661 Mar 18 14:35 X55KDm7r1M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmHxyLDmNcrgun.diag
[2026-03-18 14:35:27] -rw-r--r-- 1 boincer umatlas      9343 Mar 18 14:35 runtime_log.err
[2026-03-18 14:35:27] -rw-r--r-- 1 boincer umatlas     21093 Mar 18 14:35 stderr.txt
[2026-03-18 14:35:27] HITS file was successfully produced:
[2026-03-18 14:35:27] -rw------- 1 boincer umatlas 229076040 Mar 18 14:33 shared/HITS.pool.root.1
[2026-03-18 14:35:27]  *** Contents of shared directory: ***
[2026-03-18 14:35:27] total 483220
[2026-03-18 14:35:27] -rw-r--r-- 2 boincer umatlas 263556113 Mar 18 12:21 ATLAS.root_0
[2026-03-18 14:35:27] -rw-r--r-- 2 boincer umatlas     15845 Mar 18 12:21 start_atlas.sh
[2026-03-18 14:35:27] -rw-r--r-- 2 boincer umatlas    597536 Mar 18 12:21 input.tar.gz
[2026-03-18 14:35:27] -rw------- 1 boincer umatlas 229076040 Mar 18 14:33 HITS.pool.root.1
[2026-03-18 14:35:27] -rw------- 1 boincer umatlas   1566720 Mar 18 14:35 result.tar.gz
14:35:29 (23259): run_atlas exited; CPU time 86464.028370
14:35:29 (23259): called boinc_finish(0)

</stderr_txt>
]]>

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