Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:07:05 (392242): wrapper (7.7.26015): starting
11:07:05 (392242): wrapper: running run_atlas (--nthreads 12)
[2026-03-20 11:07:05] Arguments: --nthreads 12
[2026-03-20 11:07:05] Threads: 12
[2026-03-20 11:07:05] Checking for CVMFS
[2026-03-20 11:07:05] No cvmfs_config command found, will try listing directly
[2026-03-20 11:07:05] CVMFS is ok
[2026-03-20 11:07:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 11:07:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-20 11:07:05] Further information can be found at the LHC@home message board.
[2026-03-20 11:07:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 11:07:05] Checking for apptainer binary...
[2026-03-20 11:07:05] which: no apptainer in ((null))
[2026-03-20 11:07:05] apptainer is not installed, using version from CVMFS
[2026-03-20 11:07:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 11:07:05] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot120/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-20 11:07:05] apptainer works
[2026-03-20 11:07:05] Set ATHENA_PROC_NUMBER=12
[2026-03-20 11:07:05] Set ATHENA_CORE_NUMBER=12
[2026-03-20 11:07:06] Starting ATLAS job with PandaID=7058593228
[2026-03-20 11:07:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot120/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 11:58:35]  *** The last 200 lines of the pilot log: ***
[2026-03-20 11:58:35]  is_tar=False
[2026-03-20 11:58:35]  lfn=log.49178257._000021.job.log.tgz.1
[2026-03-20 11:58:35]  mtime=0
[2026-03-20 11:58:35]  protocol_id=None
[2026-03-20 11:58:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-20 11:58:35]  replicas=None
[2026-03-20 11:58:35]  scope=mc23_13p6TeV
[2026-03-20 11:58:35]  status=None
[2026-03-20 11:58:35]  status_code=0
[2026-03-20 11:58:35]  storage_token=
[2026-03-20 11:58:35]  surl=/var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7058593228/log.49178257._000021.job.log.tgz.1
[2026-03-20 11:58:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/40/log.49178257._000021.job.log.tgz.1
[2026-03-20 11:58:35]  workdir=None
[2026-03-20 11:58:35] ]
[2026-03-20 11:58:35] 2026-03-20 10:55:41,119 | INFO     | transferring file log.49178257._000021.job.log.tgz.1 from /var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7058593228/log.49178257._000021.job.log.tgz.1 to /var/lib/
[2026-03-20 11:58:35] 2026-03-20 10:55:41,119 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7058593228/log.49178257._000021.job.log.tgz.1 /var/lib/boinc/var/slot120/slots/2/
[2026-03-20 11:58:35] 2026-03-20 10:55:41,133 | INFO     | adding to output.list: log.49178257._000021.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/40/log.49178257._000021.job.log.tg
[2026-03-20 11:58:35] 2026-03-20 10:55:41,134 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-20 11:58:35] 2026-03-20 10:55:41,134 | INFO     | summary of transferred files:
[2026-03-20 11:58:35] 2026-03-20 10:55:41,134 | INFO     |  -- lfn=log.49178257._000021.job.log.tgz.1, status_code=0, status=transferred
[2026-03-20 11:58:35] 2026-03-20 10:55:41,134 | INFO     | stage-out finished correctly
[2026-03-20 11:58:35] 2026-03-20 10:55:41,178 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-20 11:58:35] 2026-03-20 10:55:41,967 | INFO     | time since job start (2907s) is within the limit (345600.0s)
[2026-03-20 11:58:35] 2026-03-20 10:55:43,427 | INFO     | PID=401381 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-20 11:58:35] 2026-03-20 10:55:43,428 | INFO     | .. there are 8 such processes running
[2026-03-20 11:58:35] 2026-03-20 10:55:43,989 | INFO     | job 7058593228 has state=finished
[2026-03-20 11:58:35] 2026-03-20 10:55:43,989 | INFO     | preparing for final server update for job 7058593228 in state='finished'
[2026-03-20 11:58:35] 2026-03-20 10:55:43,989 | INFO     | reading metadata from: /var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7058593228/jobReport.json
[2026-03-20 11:58:35] 2026-03-20 10:55:43,990 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot120/slots/2/workernode_map.json
[2026-03-20 11:58:35] 2026-03-20 10:55:43,991 | INFO     | this job has now completed (state=finished)
[2026-03-20 11:58:35] 2026-03-20 10:55:43,991 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-20 11:58:35] 2026-03-20 10:55:43,991 | INFO     | log transfer has been attempted: DONE
[2026-03-20 11:58:35] 2026-03-20 10:55:43,991 | INFO     | job 7058593228 has finished - writing final server update
[2026-03-20 11:58:35] 2026-03-20 10:55:43,991 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3281823/.job.ad'
[2026-03-20 11:58:35] 2026-03-20 10:55:43,991 | INFO     | total number of processed events: 400 (read)
[2026-03-20 11:58:35] 2026-03-20 10:55:44,007 | INFO     | using path: /var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7058593228/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 11:58:35] 2026-03-20 10:55:44,007 | INFO     | extracted standard info from prmon json
[2026-03-20 11:58:35] 2026-03-20 10:55:44,007 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 11:58:35] 2026-03-20 10:55:44,007 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 11:58:35] 2026-03-20 10:55:44,008 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 11:58:35] 2026-03-20 10:55:44,008 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 11:58:35] 2026-03-20 10:55:44,008 | INFO     | fitting pss+swap vs Time
[2026-03-20 11:58:35] 2026-03-20 10:55:44,008 | INFO     | sum of square deviations: 21358540.0
[2026-03-20 11:58:35] 2026-03-20 10:55:44,009 | INFO     | sum of deviations: -308555751.0
[2026-03-20 11:58:35] 2026-03-20 10:55:44,009 | INFO     | mean x: 1774002777.0
[2026-03-20 11:58:35] 2026-03-20 10:55:44,009 | INFO     | mean y: 2707801.2926829266
[2026-03-20 11:58:35] 2026-03-20 10:55:44,009 | INFO     | intersect: 25630805935.964832
[2026-03-20 11:58:35] 2026-03-20 10:55:44,009 | INFO     | chi2: 0.005257457961878166
[2026-03-20 11:58:35] 2026-03-20 10:55:44,009 | INFO     | current memory leak: -14.45 B/s (using 41 data points, chi2=0.01)
[2026-03-20 11:58:35] 2026-03-20 10:55:44,009 | INFO     | could have reported an average CPU frequency of 3763 MHz (5 samples)
[2026-03-20 11:58:35] 2026-03-20 10:55:44,009 | INFO     | ..............................
[2026-03-20 11:58:35] 2026-03-20 10:55:44,009 | INFO     | . Timing measurements:
[2026-03-20 11:58:35] 2026-03-20 10:55:44,009 | INFO     | . get job = 0 s
[2026-03-20 11:58:35] 2026-03-20 10:55:44,009 | INFO     | . initial setup = 2 s
[2026-03-20 11:58:35] 2026-03-20 10:55:44,009 | INFO     | . payload setup = 4 s
[2026-03-20 11:58:35] 2026-03-20 10:55:44,009 | INFO     | . stage-in = 0 s
[2026-03-20 11:58:35] 2026-03-20 10:55:44,009 | INFO     | . payload execution = 2887 s
[2026-03-20 11:58:35] 2026-03-20 10:55:44,009 | INFO     | . stage-out = 0 s
[2026-03-20 11:58:35] 2026-03-20 10:55:44,009 | INFO     | . log creation = 0 s
[2026-03-20 11:58:35] 2026-03-20 10:55:44,009 | INFO     | ..............................
[2026-03-20 11:58:35] 2026-03-20 10:55:44,052 | INFO     | 
[2026-03-20 11:58:35] 2026-03-20 10:55:44,052 | INFO     | job summary report
[2026-03-20 11:58:35] 2026-03-20 10:55:44,052 | INFO     | --------------------------------------------------
[2026-03-20 11:58:35] 2026-03-20 10:55:44,052 | INFO     | PanDA job id: 7058593228
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | task id: 49178257
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | errors: (none)
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | pilot state: finished 
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | transexitcode: 0
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | exeerrorcode: 0
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | exeerrordiag: 
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | exitcode: 0
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | exitmsg: OK
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | cpuconsumptiontime: 31869 s
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | nevents: 400
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | neventsw: 0
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | pid: 407253
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | pgrp: 407253
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | corecount: 12
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | event service: False
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | sizes: {0: 2280173, 11: 2280173, 2895: 2305581, 2896: 2314659, 2899: 2314829}
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | --------------------------------------------------
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | 
[2026-03-20 11:58:35] 2026-03-20 10:55:44,053 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot120/slots/2
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | job 7058593228 has completed (purged errors)
[2026-03-20 11:58:35] 2026-03-20 10:55:44,068 | INFO     | overall cleanup function is called
[2026-03-20 11:58:35] 2026-03-20 10:55:45,075 | INFO     | --- collectZombieJob: --- 10, [407253]
[2026-03-20 11:58:35] 2026-03-20 10:55:45,076 | INFO     | zombie collector waiting for pid 407253
[2026-03-20 11:58:35] 2026-03-20 10:55:45,076 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 11:58:35] 2026-03-20 10:55:45,076 | INFO     | collected zombie processes
[2026-03-20 11:58:35] 2026-03-20 10:55:45,076 | INFO     | will attempt to kill all subprocesses of pid=407253
[2026-03-20 11:58:35] 2026-03-20 10:55:45,399 | INFO     | process IDs to be killed: [407253] (in reverse order)
[2026-03-20 11:58:35] 2026-03-20 10:55:45,543 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 11:58:35] 2026-03-20 10:55:45,544 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 11:58:35] 2026-03-20 10:55:45,569 | INFO     | did not find any defunct processes belonging to 407253
[2026-03-20 11:58:35] 2026-03-20 10:55:45,593 | INFO     | did not find any defunct processes belonging to 407253
[2026-03-20 11:58:35] 2026-03-20 10:55:45,593 | INFO     | ready for new job
[2026-03-20 11:58:35] 2026-03-20 10:55:45,594 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 11:58:35] 2026-03-20 10:55:45,594 | INFO     | **************************************
[2026-03-20 11:58:35] 2026-03-20 10:55:45,595 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 11:58:35] 2026-03-20 10:55:45,595 | INFO     | **************************************
[2026-03-20 11:58:35] 2026-03-20 10:55:45,595 | INFO     | 
[2026-03-20 11:58:35] 2026-03-20 10:55:45,600 | INFO     | architecture information:
[2026-03-20 11:58:35] 2026-03-20 10:55:45,600 | INFO     | executing command: cat /etc/os-release
[2026-03-20 11:58:35] 2026-03-20 10:55:45,612 | INFO     | cat /etc/os-release:
[2026-03-20 11:58:35] NAME="CentOS Linux"
[2026-03-20 11:58:35] VERSION="7 (Core)"
[2026-03-20 11:58:35] ID="centos"
[2026-03-20 11:58:35] ID_LIKE="rhel fedora"
[2026-03-20 11:58:35] VERSION_ID="7"
[2026-03-20 11:58:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 11:58:35] ANSI_COLOR="0;31"
[2026-03-20 11:58:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 11:58:35] HOME_URL="https://www.centos.org/"
[2026-03-20 11:58:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 11:58:35] 
[2026-03-20 11:58:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 11:58:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 11:58:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 11:58:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 11:58:35] 
[2026-03-20 11:58:35] 2026-03-20 10:55:45,612 | INFO     | **************************************
[2026-03-20 11:58:35] 2026-03-20 10:55:46,068 | WARNING  | process 407253 can no longer be monitored (due to stat problems) - aborting
[2026-03-20 11:58:35] 2026-03-20 10:55:46,115 | INFO     | executing command: df -mP /var/lib/boinc/var/slot120/slots/2
[2026-03-20 11:58:35] 2026-03-20 10:55:46,132 | INFO     | sufficient remaining disk space (201565667328 B)
[2026-03-20 11:58:35] 2026-03-20 10:55:46,132 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 11:58:35] 2026-03-20 10:55:46,132 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 11:58:35] 2026-03-20 10:55:46,132 | INFO     | update_server=False
[2026-03-20 11:58:35] 2026-03-20 10:55:46,132 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 11:58:35] 2026-03-20 10:55:46,249 | INFO     | all payload control threads have been joined
[2026-03-20 11:58:35] 2026-03-20 10:55:46,306 | INFO     | using path: /var/lib/boinc/var/slot120/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 11:58:35] 2026-03-20 10:55:46,453 | INFO     | all data control threads have been joined
[2026-03-20 11:58:35] 2026-03-20 10:55:46,542 | INFO     | number of running child processes to parent process 407253: 1
[2026-03-20 11:58:35] 2026-03-20 10:55:46,542 | INFO     | maximum number of monitored processes: 6
[2026-03-20 11:58:35] 2026-03-20 10:55:46,542 | INFO     | aborting job monitoring since job object (job id=7058593228) has expired
[2026-03-20 11:58:35] 2026-03-20 10:55:46,542 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 11:58:35] 2026-03-20 10:55:46,543 | INFO     | will abort loop
[2026-03-20 11:58:35] 2026-03-20 10:55:46,686 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 11:58:35] 2026-03-20 10:55:47,137 | INFO     | [job] retrieve thread has finished
[2026-03-20 11:58:35] 2026-03-20 10:55:47,177 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 11:58:35] 2026-03-20 10:55:47,182 | INFO     | [job] validate thread has finished
[2026-03-20 11:58:35] 2026-03-20 10:55:47,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 11:58:35] 2026-03-20 10:55:47,255 | INFO     | [payload] control thread has finished
[2026-03-20 11:58:35] 2026-03-20 10:55:47,309 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 11:58:35] 2026-03-20 10:55:47,336 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 11:58:35] 2026-03-20 10:55:47,359 | INFO     | [payload] failed_post thread has finished
[2026-03-20 11:58:35] 2026-03-20 10:55:47,433 | INFO     | [data] copytool_in thread has finished
[2026-03-20 11:58:35] 2026-03-20 10:55:47,458 | INFO     | [data] control thread has finished
[2026-03-20 11:58:35] 2026-03-20 10:55:47,548 | INFO     | [job] job monitor thread has finished
[2026-03-20 11:58:35] 2026-03-20 10:55:47,743 | INFO     | all job control threads have been joined
[2026-03-20 11:58:35] 2026-03-20 10:55:47,926 | INFO     | [payload] validate_post thread has finished
[2026-03-20 11:58:35] 2026-03-20 10:55:47,995 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 11:58:35] 2026-03-20 10:55:48,692 | INFO     | [data] copytool_out thread has finished
[2026-03-20 11:58:35] 2026-03-20 10:55:48,748 | INFO     | [job] control thread has finished
[2026-03-20 11:58:35] 2026-03-20 10:55:49,063 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 11:58:35] 2026-03-20 10:55:50,068 | INFO     | [job] queue monitor thread has finished
[2026-03-20 11:58:35] 2026-03-20 10:55:51,232 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 11:58:35] 2026-03-20 10:56:15,951 | INFO     | PID=401381 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-20 11:58:35] 2026-03-20 10:56:15,954 | INFO     | .. there are 8 such processes running
[2026-03-20 11:58:35] 2026-03-20 10:56:15,954 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 11:58:35] 2026-03-20 10:56:15,954 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 11:58:35] 2026-03-20 10:56:15,954 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 11:58:35] 2026-03-20 10:56:17,669 | INFO     | [monitor] cgroup control has ended
[2026-03-20 11:58:35] 2026-03-20 10:56:18,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22799911122752)>', '<ExcThread(monitor, started 22799667431168)>']
[2026-03-20 11:58:35] 2026-03-20 10:56:18,969 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 11:58:35] 2026-03-20 10:56:18,970 | INFO     | [monitor] control thread has ended
[2026-03-20 11:58:35] 2026-03-20 10:56:23,382 | INFO     | all workflow threads have been joined
[2026-03-20 11:58:35] 2026-03-20 10:56:23,382 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 11:58:35] 2026-03-20 10:56:23,383 | INFO     | traces error code: 0
[2026-03-20 11:58:35] 2026-03-20 10:56:23,383 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 11:58:35] 2026-03-20 10:56:23,555 [wrapper] ==== pilot stdout END ====
[2026-03-20 11:58:35] 2026-03-20 10:56:23,560 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 11:58:35] 2026-03-20 10:56:23,563 [wrapper] pilotpid: 401381
[2026-03-20 11:58:35] 2026-03-20 10:56:23,565 [wrapper] Pilot exit status: 0
[2026-03-20 11:58:35] 2026-03-20 10:56:23,573 [wrapper] pandaids: 7058593228
[2026-03-20 11:58:35] 2026-03-20 10:56:23,677 [wrapper] cleanup supervisor_pilot  549783 401382
[2026-03-20 11:58:35] 2026-03-20 10:56:23,679 [wrapper] Test setup, not cleaning
[2026-03-20 11:58:35] 2026-03-20 10:56:23,681 [wrapper] apfmon messages muted
[2026-03-20 11:58:35] 2026-03-20 10:56:23,683 [wrapper] ==== wrapper stdout END ====
[2026-03-20 11:58:35] 2026-03-20 10:56:23,685 [wrapper] ==== wrapper stderr END ====
[2026-03-20 11:58:35]  *** Error codes and diagnostics ***
[2026-03-20 11:58:35]     "exeErrorCode": 0,
[2026-03-20 11:58:35]     "exeErrorDiag": "",
[2026-03-20 11:58:35]     "pilotErrorCode": 0,
[2026-03-20 11:58:35]     "pilotErrorDiag": "",
[2026-03-20 11:58:35]  *** Listing of results directory ***
[2026-03-20 11:58:35] total 412332
[2026-03-20 11:58:35] -rw-r--r--. 1 boinc boinc      5111 Mar 18 09:55 queuedata.json
[2026-03-20 11:58:35] -rw-r--r--. 1 boinc boinc    585013 Mar 18 09:55 pilot3.tar.gz
[2026-03-20 11:58:35] -rwx------. 1 boinc boinc     36322 Mar 18 09:55 runpilot2-wrapper.sh
[2026-03-20 11:58:35] -rw-r--r--. 1 boinc boinc       100 Mar 20 11:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 11:58:35] -rwxr-xr-x. 1 boinc boinc      7986 Mar 20 11:07 run_atlas
[2026-03-20 11:58:35] -rw-r--r--. 1 boinc boinc       105 Mar 20 11:07 job.xml
[2026-03-20 11:58:35] -rw-r--r--. 2 boinc boinc     15845 Mar 20 11:07 start_atlas.sh
[2026-03-20 11:58:35] drwxrwx--x. 2 boinc boinc      4096 Mar 20 11:07 shared
[2026-03-20 11:58:35] -rw-r--r--. 2 boinc boinc    597529 Mar 20 11:07 input.tar.gz
[2026-03-20 11:58:35] -rw-r--r--. 1 boinc boinc      6711 Mar 20 11:07 init_data.xml
[2026-03-20 11:58:35] -rw-r--r--. 2 boinc boinc 215785013 Mar 20 11:07 EVNT.49128386._000001.pool.root.1
[2026-03-20 11:58:35] -rw-r--r--. 1 boinc boinc         0 Mar 20 11:07 boinc_lockfile
[2026-03-20 11:58:35] -rw-r--r--. 1 boinc boinc      2587 Mar 20 11:07 pandaJob.out
[2026-03-20 11:58:35] -rw-------. 1 boinc boinc   1010749 Mar 20 11:07 agis_schedconf.cvmfs.json
[2026-03-20 11:58:35] -rw-------. 1 boinc boinc   1511579 Mar 20 11:07 agis_ddmendpoints.agis.ALL.json
[2026-03-20 11:58:35] -rw-------. 1 boinc boinc       445 Mar 20 11:07 workernode_map.json
[2026-03-20 11:58:35] drwx------. 5 boinc boinc      4096 Mar 20 11:07 pilot3
[2026-03-20 11:58:35] -rw-r--r--. 1 boinc boinc       528 Mar 20 11:55 boinc_task_state.xml
[2026-03-20 11:58:35] -rw-------. 1 boinc boinc 200854764 Mar 20 11:55 HITS.49178257._000021.pool.root.1
[2026-03-20 11:58:35] -rw-------. 1 boinc boinc      1030 Mar 20 11:55 memory_monitor_summary.json
[2026-03-20 11:58:35] -rw-------. 1 boinc boinc    373268 Mar 20 11:55 log.49178257._000021.job.log.tgz.1
[2026-03-20 11:58:35] -rw-------. 1 boinc boinc      6349 Mar 20 11:55 heartbeat.json
[2026-03-20 11:58:35] -rw-------. 1 boinc boinc        95 Mar 20 11:56 pilot_heartbeat.json
[2026-03-20 11:58:35] -rw-------. 1 boinc boinc      5360 Mar 20 11:56 pilotlog.txt
[2026-03-20 11:58:35] -rw-------. 1 boinc boinc    451629 Mar 20 11:56 log.49178257._000021.job.log.1
[2026-03-20 11:58:35] -rw-------. 1 boinc boinc       357 Mar 20 11:56 output.list
[2026-03-20 11:58:35] -rw-r--r--. 1 boinc boinc       620 Mar 20 11:56 runtime_log
[2026-03-20 11:58:35] -rw-------. 1 boinc boinc    839680 Mar 20 11:56 result.tar.gz
[2026-03-20 11:58:35] -rw-r--r--. 1 boinc boinc      9223 Mar 20 11:56 runtime_log.err
[2026-03-20 11:58:35] -rw-------. 1 boinc boinc       662 Mar 20 11:56 3R1NDmbr1M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmoryLDmBKXRJo.diag
[2026-03-20 11:58:35] -rw-r--r--. 1 boinc boinc        26 Mar 20 11:58 wrapper_checkpoint.txt
[2026-03-20 11:58:35] -rw-r--r--. 1 boinc boinc      8192 Mar 20 11:58 boinc_mmap_file
[2026-03-20 11:58:35] -rw-r--r--. 1 boinc boinc     21521 Mar 20 11:58 stderr.txt
[2026-03-20 11:58:35] HITS file was successfully produced:
[2026-03-20 11:58:35] -rw-------. 1 boinc boinc 200854764 Mar 20 11:55 shared/HITS.pool.root.1
[2026-03-20 11:58:35]  *** Contents of shared directory: ***
[2026-03-20 11:58:35] total 408304
[2026-03-20 11:58:35] -rw-r--r--. 2 boinc boinc     15845 Mar 20 11:07 start_atlas.sh
[2026-03-20 11:58:35] -rw-r--r--. 2 boinc boinc    597529 Mar 20 11:07 input.tar.gz
[2026-03-20 11:58:35] -rw-r--r--. 2 boinc boinc 215785013 Mar 20 11:07 ATLAS.root_0
[2026-03-20 11:58:35] -rw-------. 1 boinc boinc 200854764 Mar 20 11:55 HITS.pool.root.1
[2026-03-20 11:58:35] -rw-------. 1 boinc boinc    839680 Mar 20 11:56 result.tar.gz
11:58:36 (392242): run_atlas exited; CPU time 31972.362344
11:58:36 (392242): called boinc_finish(0)

</stderr_txt>
]]>

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