Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:45:47 (558843): wrapper (7.7.26015): starting
05:45:47 (558843): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 05:45:47] Arguments: --nthreads 8
[2026-03-18 05:45:47] Threads: 8
[2026-03-18 05:45:47] Checking for CVMFS
[2026-03-18 05:45:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 05:45:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 05:45:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 05:45:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 05:45:48] 2.13.3.0 8759 119137 239660 157409 2 808 32463305 40960001 30752 16776704 0 992361665 99.682 797220038 43656 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-18 05:45:48] CVMFS is ok
[2026-03-18 05:45:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 05:45:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 05:45:48] Further information can be found at the LHC@home message board.
[2026-03-18 05:45:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 05:45:48] Checking for apptainer binary...
[2026-03-18 05:45:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 05:45:48] Running /usr/bin/apptainer --version
[2026-03-18 05:45:49] apptainer version 1.4.5-2.el9
[2026-03-18 05:45:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 05:45:50] c-208-39.aglt2.org
[2026-03-18 05:45:50] apptainer works
[2026-03-18 05:45:50] Set ATHENA_PROC_NUMBER=8
[2026-03-18 05:45:50] Set ATHENA_CORE_NUMBER=8
[2026-03-18 05:45:50] Starting ATLAS job with PandaID=7050868470
[2026-03-18 05:45:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 08:42:40]  *** The last 200 lines of the pilot log: ***
[2026-03-18 08:42:40] 2026-03-18 12:41:55,652 | INFO     | total number of processed events: 400 (read)
[2026-03-18 08:42:40] 2026-03-18 12:41:55,713 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-7050868470/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 08:42:40] 2026-03-18 12:41:55,713 | INFO     | extracted standard info from prmon json
[2026-03-18 08:42:40] 2026-03-18 12:41:55,713 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 08:42:40] 2026-03-18 12:41:55,713 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 08:42:40] 2026-03-18 12:41:55,713 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 08:42:40] 2026-03-18 12:41:55,713 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 08:42:40] 2026-03-18 12:41:55,715 | INFO     | fitting pss+swap vs Time
[2026-03-18 08:42:40] 2026-03-18 12:41:55,715 | INFO     | sum of square deviations: 1418334528.319273
[2026-03-18 08:42:40] 2026-03-18 12:41:55,716 | INFO     | sum of deviations: 108035343954.7952
[2026-03-18 08:42:40] 2026-03-18 12:41:55,716 | INFO     | mean x: 1773832626.5843372
[2026-03-18 08:42:40] 2026-03-18 12:41:55,716 | INFO     | mean y: 2338841.2289156625
[2026-03-18 08:42:40] 2026-03-18 12:41:55,716 | INFO     | intersect: -135111496509.2833
[2026-03-18 08:42:40] 2026-03-18 12:41:55,729 | INFO     | chi2: 10.74341053819458
[2026-03-18 08:42:40] 2026-03-18 12:41:55,729 | INFO     | sum of square deviations: 1293992280.7826104
[2026-03-18 08:42:40] 2026-03-18 12:41:55,730 | INFO     | sum of deviations: 115488175269.86958
[2026-03-18 08:42:40] 2026-03-18 12:41:55,730 | INFO     | mean x: 1773832474.0869565
[2026-03-18 08:42:40] 2026-03-18 12:41:55,730 | INFO     | mean y: 2347644.652173913
[2026-03-18 08:42:40] 2026-03-18 12:41:55,730 | INFO     | intersect: -158311329113.01974
[2026-03-18 08:42:40] 2026-03-18 12:41:55,730 | INFO     | chi2: 10.074568864562153
[2026-03-18 08:42:40] 2026-03-18 12:41:55,730 | INFO     | current chi2=10.074568864562153 (change=6.225599135903681 %)
[2026-03-18 08:42:40] 2026-03-18 12:41:55,730 | INFO     | right removable region: 160
[2026-03-18 08:42:40] 2026-03-18 12:41:55,730 | INFO     | sum of square deviations: 1293983740.7826104
[2026-03-18 08:42:40] 2026-03-18 12:41:55,731 | INFO     | sum of deviations: 49055078428.13041
[2026-03-18 08:42:40] 2026-03-18 12:41:55,731 | INFO     | mean x: 1773832779.0869565
[2026-03-18 08:42:40] 2026-03-18 12:41:55,731 | INFO     | mean y: 2411195.0621118015
[2026-03-18 08:42:40] 2026-03-18 12:41:55,731 | INFO     | intersect: -67243801685.38072
[2026-03-18 08:42:40] 2026-03-18 12:41:55,731 | INFO     | chi2: 4.617073577292832
[2026-03-18 08:42:40] 2026-03-18 12:41:55,731 | INFO     | current chi2=4.617073577292832 (change=57.02413529783321 %)
[2026-03-18 08:42:40] 2026-03-18 12:41:55,731 | INFO     | sum of square deviations: 1177121465.743588
[2026-03-18 08:42:40] 2026-03-18 12:41:55,732 | INFO     | sum of deviations: 1048948619.7692356
[2026-03-18 08:42:40] 2026-03-18 12:41:55,732 | INFO     | mean x: 1773832931.5897436
[2026-03-18 08:42:40] 2026-03-18 12:41:55,737 | INFO     | mean y: 2473731.230769231
[2026-03-18 08:42:40] 2026-03-18 12:41:55,737 | INFO     | intersect: -1578212425.1608307
[2026-03-18 08:42:40] 2026-03-18 12:41:55,737 | INFO     | chi2: 1.0657255176085105
[2026-03-18 08:42:40] 2026-03-18 12:41:55,737 | INFO     | current chi2=1.0657255176085105 (change=76.91772721903673 %)
[2026-03-18 08:42:40] 2026-03-18 12:41:55,738 | INFO     | sum of square deviations: 1067515140.7019833
[2026-03-18 08:42:40] 2026-03-18 12:41:55,738 | INFO     | sum of deviations: -9844427120.18543
[2026-03-18 08:42:40] 2026-03-18 12:41:55,738 | INFO     | mean x: 1773833084.0927153
[2026-03-18 08:42:40] 2026-03-18 12:41:55,738 | INFO     | mean y: 2488751.013245033
[2026-03-18 08:42:40] 2026-03-18 12:41:55,738 | INFO     | intersect: 16360449265.036
[2026-03-18 08:42:40] 2026-03-18 12:41:55,738 | INFO     | chi2: 0.8434924667339939
[2026-03-18 08:42:40] 2026-03-18 12:41:55,738 | INFO     | current chi2=0.8434924667339939 (change=20.852747466646747 %)
[2026-03-18 08:42:40] 2026-03-18 12:41:55,738 | INFO     | left removable region: 30
[2026-03-18 08:42:40] 2026-03-18 12:41:55,738 | INFO     | sum of square deviations: 681192469.5692304
[2026-03-18 08:42:40] 2026-03-18 12:41:55,739 | INFO     | sum of deviations: 1591857066.7230773
[2026-03-18 08:42:40] 2026-03-18 12:41:55,739 | INFO     | mean x: 1773833358.5846155
[2026-03-18 08:42:40] 2026-03-18 12:41:55,739 | INFO     | mean y: 2501697.1615384617
[2026-03-18 08:42:40] 2026-03-18 12:41:55,739 | INFO     | intersect: -4142713191.719548
[2026-03-18 08:42:40] 2026-03-18 12:41:55,739 | INFO     | chi2: 0.0005919557249719796
[2026-03-18 08:42:40] 2026-03-18 12:41:55,739 | INFO     | current memory leak: 2.34 B/s (using 130 data points, chi2=0.00)
[2026-03-18 08:42:40] 2026-03-18 12:41:55,739 | INFO     | could have reported an average CPU frequency of 3795 MHz (9 samples)
[2026-03-18 08:42:40] 2026-03-18 12:41:55,740 | INFO     | ..............................
[2026-03-18 08:42:40] 2026-03-18 12:41:55,740 | INFO     | . Timing measurements:
[2026-03-18 08:42:40] 2026-03-18 12:41:55,740 | INFO     | . get job = 0 s
[2026-03-18 08:42:40] 2026-03-18 12:41:55,740 | INFO     | . initial setup = 48 s
[2026-03-18 08:42:40] 2026-03-18 12:41:55,740 | INFO     | . payload setup = 255 s
[2026-03-18 08:42:40] 2026-03-18 12:41:55,740 | INFO     | . stage-in = 0 s
[2026-03-18 08:42:40] 2026-03-18 12:41:55,740 | INFO     | . payload execution = 10141 s
[2026-03-18 08:42:40] 2026-03-18 12:41:55,740 | INFO     | . stage-out = 2 s
[2026-03-18 08:42:40] 2026-03-18 12:41:55,740 | INFO     | . log creation = 0 s
[2026-03-18 08:42:40] 2026-03-18 12:41:55,740 | INFO     | ..............................
[2026-03-18 08:42:40] 2026-03-18 12:41:56,017 | INFO     | time since job start (10422s) is within the limit (345600.0s)
[2026-03-18 08:42:40] 2026-03-18 12:41:56,069 | INFO     | 
[2026-03-18 08:42:40] 2026-03-18 12:41:56,069 | INFO     | job summary report
[2026-03-18 08:42:40] 2026-03-18 12:41:56,069 | INFO     | --------------------------------------------------
[2026-03-18 08:42:40] 2026-03-18 12:41:56,069 | INFO     | PanDA job id: 7050868470
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | task id: 48967085
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | errors: (none)
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | pilot state: finished 
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | transexitcode: 0
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | exeerrorcode: 0
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | exeerrordiag: 
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | exitcode: 0
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | exitmsg: OK
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | cpuconsumptiontime: 28659 s
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | nevents: 400
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | neventsw: 0
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | pid: 580567
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | pgrp: 580567
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | corecount: 8
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | event service: False
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | sizes: {0: 2279753, 1: 2256318, 2: 2280270, 12: 2280298, 10402: 2308925, 10406: 2317923, 10408: 2318365}
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | --------------------------------------------------
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | 
[2026-03-18 08:42:40] 2026-03-18 12:41:56,070 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-03-18 08:42:40] 2026-03-18 12:41:56,136 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 08:42:40] 2026-03-18 12:41:56,137 | INFO     | job 7050868470 has completed (purged errors)
[2026-03-18 08:42:40] 2026-03-18 12:41:56,138 | INFO     | overall cleanup function is called
[2026-03-18 08:42:40] 2026-03-18 12:41:57,147 | INFO     | --- collectZombieJob: --- 10, [580567]
[2026-03-18 08:42:40] 2026-03-18 12:41:57,147 | INFO     | zombie collector waiting for pid 580567
[2026-03-18 08:42:40] 2026-03-18 12:41:57,147 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 08:42:40] 2026-03-18 12:41:57,147 | INFO     | collected zombie processes
[2026-03-18 08:42:40] 2026-03-18 12:41:57,147 | INFO     | will attempt to kill all subprocesses of pid=580567
[2026-03-18 08:42:40] 2026-03-18 12:41:58,282 | INFO     | process IDs to be killed: [580567] (in reverse order)
[2026-03-18 08:42:40] 2026-03-18 12:41:59,128 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 08:42:40] 2026-03-18 12:41:59,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 08:42:40] 2026-03-18 12:41:59,192 | INFO     | did not find any defunct processes belonging to 580567
[2026-03-18 08:42:40] 2026-03-18 12:41:59,275 | INFO     | did not find any defunct processes belonging to 580567
[2026-03-18 08:42:40] 2026-03-18 12:41:59,275 | INFO     | ready for new job
[2026-03-18 08:42:40] 2026-03-18 12:41:59,275 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 08:42:40] 2026-03-18 12:41:59,277 | INFO     | **************************************
[2026-03-18 08:42:40] 2026-03-18 12:41:59,277 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 08:42:40] 2026-03-18 12:41:59,277 | INFO     | **************************************
[2026-03-18 08:42:40] 2026-03-18 12:41:59,277 | INFO     | 
[2026-03-18 08:42:40] 2026-03-18 12:41:59,297 | INFO     | architecture information:
[2026-03-18 08:42:40] 2026-03-18 12:41:59,309 | INFO     | executing command: cat /etc/os-release
[2026-03-18 08:42:40] 2026-03-18 12:41:59,342 | INFO     | cat /etc/os-release:
[2026-03-18 08:42:40] NAME="CentOS Linux"
[2026-03-18 08:42:40] VERSION="7 (Core)"
[2026-03-18 08:42:40] ID="centos"
[2026-03-18 08:42:40] ID_LIKE="rhel fedora"
[2026-03-18 08:42:40] VERSION_ID="7"
[2026-03-18 08:42:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 08:42:40] ANSI_COLOR="0;31"
[2026-03-18 08:42:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 08:42:40] HOME_URL="https://www.centos.org/"
[2026-03-18 08:42:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 08:42:40] 
[2026-03-18 08:42:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 08:42:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 08:42:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 08:42:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 08:42:40] 
[2026-03-18 08:42:40] 2026-03-18 12:41:59,343 | INFO     | **************************************
[2026-03-18 08:42:40] 2026-03-18 12:41:59,846 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-03-18 08:42:40] 2026-03-18 12:41:59,878 | INFO     | sufficient remaining disk space (170666229760 B)
[2026-03-18 08:42:40] 2026-03-18 12:41:59,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 08:42:40] 2026-03-18 12:41:59,878 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 08:42:40] 2026-03-18 12:41:59,878 | INFO     | update_server=False
[2026-03-18 08:42:40] 2026-03-18 12:41:59,878 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 08:42:40] 2026-03-18 12:41:59,878 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 08:42:40] 2026-03-18 12:42:00,117 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-18 08:42:40] 2026-03-18 12:42:00,117 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-18 08:42:40] 2026-03-18 12:42:00,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 08:42:40] 2026-03-18 12:42:00,118 | INFO     | will abort loop
[2026-03-18 08:42:40] 2026-03-18 12:42:00,288 | INFO     | all data control threads have been joined
[2026-03-18 08:42:40] 2026-03-18 12:42:00,559 | INFO     | all job control threads have been joined
[2026-03-18 08:42:40] 2026-03-18 12:42:00,884 | INFO     | [job] retrieve thread has finished
[2026-03-18 08:42:40] 2026-03-18 12:42:00,977 | INFO     | [job] validate thread has finished
[2026-03-18 08:42:40] 2026-03-18 12:42:00,978 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 08:42:40] 2026-03-18 12:42:00,978 | INFO     | all payload control threads have been joined
[2026-03-18 08:42:40] 2026-03-18 12:42:00,982 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 08:42:40] 2026-03-18 12:42:00,988 | INFO     | [payload] failed_post thread has finished
[2026-03-18 08:42:40] 2026-03-18 12:42:00,993 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 08:42:40] 2026-03-18 12:42:01,042 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 08:42:40] 2026-03-18 12:42:01,123 | INFO     | [job] job monitor thread has finished
[2026-03-18 08:42:40] 2026-03-18 12:42:01,294 | INFO     | [data] control thread has finished
[2026-03-18 08:42:40] 2026-03-18 12:42:01,528 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 08:42:40] 2026-03-18 12:42:01,565 | INFO     | [job] control thread has finished
[2026-03-18 08:42:40] 2026-03-18 12:42:01,763 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 08:42:40] 2026-03-18 12:42:01,767 | INFO     | [data] copytool_in thread has finished
[2026-03-18 08:42:40] 2026-03-18 12:42:01,885 | INFO     | [data] copytool_out thread has finished
[2026-03-18 08:42:40] 2026-03-18 12:42:01,984 | INFO     | [payload] control thread has finished
[2026-03-18 08:42:40] 2026-03-18 12:42:01,999 | INFO     | [job] queue monitor thread has finished
[2026-03-18 08:42:40] 2026-03-18 12:42:02,291 | INFO     | [payload] validate_post thread has finished
[2026-03-18 08:42:40] 2026-03-18 12:42:05,537 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 08:42:40] 2026-03-18 12:42:30,623 | INFO     | PID=566158 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-18 08:42:40] 2026-03-18 12:42:30,624 | INFO     | .. there are 29 such processes running
[2026-03-18 08:42:40] 2026-03-18 12:42:30,624 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 08:42:40] 2026-03-18 12:42:30,624 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 08:42:40] 2026-03-18 12:42:30,624 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 08:42:40] 2026-03-18 12:42:32,420 | INFO     | [monitor] cgroup control has ended
[2026-03-18 08:42:40] 2026-03-18 12:42:33,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140171817244480)>', '<ExcThread(monitor, started 140171475408640)>']
[2026-03-18 08:42:40] 2026-03-18 12:42:33,643 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 08:42:40] 2026-03-18 12:42:33,643 | INFO     | [monitor] control thread has ended
[2026-03-18 08:42:40] 2026-03-18 12:42:38,456 | INFO     | all workflow threads have been joined
[2026-03-18 08:42:40] 2026-03-18 12:42:38,456 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 08:42:40] 2026-03-18 12:42:38,457 | INFO     | traces error code: 0
[2026-03-18 08:42:40] 2026-03-18 12:42:38,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 08:42:40] 2026-03-18 12:42:38,702 [wrapper] ==== pilot stdout END ====
[2026-03-18 08:42:40] 2026-03-18 12:42:38,722 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 08:42:40] 2026-03-18 12:42:38,734 [wrapper] pilotpid: 566158
[2026-03-18 08:42:40] 2026-03-18 12:42:38,753 [wrapper] Pilot exit status: 0
[2026-03-18 08:42:40] 2026-03-18 12:42:38,860 [wrapper] pandaids: 7050868470
[2026-03-18 08:42:40] 2026-03-18 12:42:39,229 [wrapper] cleanup supervisor_pilot 1143024 566159
[2026-03-18 08:42:40] 2026-03-18 12:42:39,261 [wrapper] Test setup, not cleaning
[2026-03-18 08:42:40] 2026-03-18 12:42:39,274 [wrapper] apfmon messages muted
[2026-03-18 08:42:40] 2026-03-18 12:42:39,312 [wrapper] ==== wrapper stdout END ====
[2026-03-18 08:42:40] 2026-03-18 12:42:39,330 [wrapper] ==== wrapper stderr END ====
[2026-03-18 08:42:40]  *** Error codes and diagnostics ***
[2026-03-18 08:42:40]     "exeErrorCode": 0,
[2026-03-18 08:42:40]     "exeErrorDiag": "",
[2026-03-18 08:42:40]     "pilotErrorCode": 0,
[2026-03-18 08:42:40]     "pilotErrorDiag": "",
[2026-03-18 08:42:40]  *** Listing of results directory ***
[2026-03-18 08:42:40] total 412884
[2026-03-18 08:42:40] -rw-r--r--. 1 boincer umatlas    585013 Mar 11 21:25 pilot3.tar.gz
[2026-03-18 08:42:40] -rwx------. 1 boincer umatlas     36322 Mar 11 21:28 runpilot2-wrapper.sh
[2026-03-18 08:42:40] -rw-r--r--. 1 boincer umatlas      5111 Mar 11 21:29 queuedata.json
[2026-03-18 08:42:40] -rw-r--r--. 1 boincer umatlas       100 Mar 18 05:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 08:42:40] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 18 05:45 run_atlas
[2026-03-18 08:42:40] -rw-r--r--. 1 boincer umatlas       105 Mar 18 05:45 job.xml
[2026-03-18 08:42:40] -rw-r--r--. 2 boincer umatlas 210450908 Mar 18 05:45 EVNT.48967083._000536.pool.root.1
[2026-03-18 08:42:40] -rw-r--r--. 2 boincer umatlas     15845 Mar 18 05:45 start_atlas.sh
[2026-03-18 08:42:40] drwxrwx--x. 2 boincer umatlas      4096 Mar 18 05:45 shared
[2026-03-18 08:42:40] -rw-r--r--. 2 boincer umatlas    597521 Mar 18 05:45 input.tar.gz
[2026-03-18 08:42:40] -rw-r--r--. 1 boincer umatlas         0 Mar 18 05:45 boinc_lockfile
[2026-03-18 08:42:40] -rw-r--r--. 1 boincer umatlas      2563 Mar 18 05:45 pandaJob.out
[2026-03-18 08:42:40] -rw-------. 1 boincer umatlas        57 Mar 18 05:45 setup.sh.local
[2026-03-18 08:42:40] -rw-------. 1 boincer umatlas   1011565 Mar 18 05:47 agis_schedconf.cvmfs.json
[2026-03-18 08:42:40] -rw-------. 1 boincer umatlas   1511579 Mar 18 05:47 agis_ddmendpoints.agis.ALL.json
[2026-03-18 08:42:40] -rw-------. 1 boincer umatlas       432 Mar 18 05:48 workernode_map.json
[2026-03-18 08:42:40] drwx------. 5 boincer umatlas      4096 Mar 18 05:48 pilot3
[2026-03-18 08:42:40] -rw-r--r--. 1 boincer umatlas      7184 Mar 18 08:38 init_data.xml
[2026-03-18 08:42:40] -rw-------. 1 boincer umatlas 204952957 Mar 18 08:40 HITS.48967085._013062.pool.root.1
[2026-03-18 08:42:40] -rw-r--r--. 1 boincer umatlas       529 Mar 18 08:40 boinc_task_state.xml
[2026-03-18 08:42:40] -rw-------. 1 boincer umatlas      1049 Mar 18 08:41 memory_monitor_summary.json
[2026-03-18 08:42:40] -rw-------. 1 boincer umatlas        95 Mar 18 08:41 pilot_heartbeat.json
[2026-03-18 08:42:40] -rw-------. 1 boincer umatlas    397468 Mar 18 08:41 log.48967085._013062.job.log.tgz.1
[2026-03-18 08:42:40] -rw-------. 1 boincer umatlas      6359 Mar 18 08:41 heartbeat.json
[2026-03-18 08:42:40] -rw-r--r--. 1 boincer umatlas      8192 Mar 18 08:42 boinc_mmap_file
[2026-03-18 08:42:40] -rw-------. 1 boincer umatlas      5006 Mar 18 08:42 pilotlog.txt
[2026-03-18 08:42:40] -rw-r--r--. 1 boincer umatlas        27 Mar 18 08:42 wrapper_checkpoint.txt
[2026-03-18 08:42:40] -rw-------. 1 boincer umatlas   1326216 Mar 18 08:42 log.48967085._013062.job.log.1
[2026-03-18 08:42:40] -rw-------. 1 boincer umatlas       357 Mar 18 08:42 output.list
[2026-03-18 08:42:40] -rw-r--r--. 1 boincer umatlas       620 Mar 18 08:42 runtime_log
[2026-03-18 08:42:40] -rw-------. 1 boincer umatlas   1740800 Mar 18 08:42 result.tar.gz
[2026-03-18 08:42:40] -rw-r--r--. 1 boincer umatlas      9342 Mar 18 08:42 runtime_log.err
[2026-03-18 08:42:40] -rw-------. 1 boincer umatlas       660 Mar 18 08:42 r0gLDmj1jK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmyelLDmTSKghm.diag
[2026-03-18 08:42:40] -rw-r--r--. 1 boincer umatlas     21136 Mar 18 08:42 stderr.txt
[2026-03-18 08:42:40] HITS file was successfully produced:
[2026-03-18 08:42:40] -rw-------. 1 boincer umatlas 204952957 Mar 18 08:40 shared/HITS.pool.root.1
[2026-03-18 08:42:40]  *** Contents of shared directory: ***
[2026-03-18 08:42:40] total 407976
[2026-03-18 08:42:40] -rw-r--r--. 2 boincer umatlas 210450908 Mar 18 05:45 ATLAS.root_0
[2026-03-18 08:42:40] -rw-r--r--. 2 boincer umatlas     15845 Mar 18 05:45 start_atlas.sh
[2026-03-18 08:42:40] -rw-r--r--. 2 boincer umatlas    597521 Mar 18 05:45 input.tar.gz
[2026-03-18 08:42:40] -rw-------. 1 boincer umatlas 204952957 Mar 18 08:40 HITS.pool.root.1
[2026-03-18 08:42:40] -rw-------. 1 boincer umatlas   1740800 Mar 18 08:42 result.tar.gz
08:43:02 (558843): run_atlas exited; CPU time 29010.019720
08:43:02 (558843): called boinc_finish(0)

</stderr_txt>
]]>

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