Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:07:55 (1601291): wrapper (7.7.26015): starting
13:07:55 (1601291): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 13:07:55] Arguments: --nthreads 4
[2026-03-18 13:07:55] Threads: 4
[2026-03-18 13:07:55] Checking for CVMFS
[2026-03-18 13:07:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 13:07:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 13:07:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 13:07:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 13:07:57] 2.13.3.0 1487640 2619 55224 157415 3 49 2277901 4096000 0 130560 0 388836 99.956 93762 2038 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-18 13:07:57] CVMFS is ok
[2026-03-18 13:07:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 13:07:57] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-18 13:07:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-18 13:07:57] Further information can be found at the LHC@home message board.
[2026-03-18 13:07:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 13:07:57] Checking for apptainer binary...
[2026-03-18 13:07:57] apptainer is not installed, using version from CVMFS
[2026-03-18 13:07:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 13:07:57] localhost
[2026-03-18 13:07:57] apptainer works
[2026-03-18 13:07:57] Set ATHENA_PROC_NUMBER=4
[2026-03-18 13:07:57] Set ATHENA_CORE_NUMBER=4
[2026-03-18 13:07:57] Starting ATLAS job with PandaID=7057542673
[2026-03-18 13:07:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 18:41:50]  *** The last 200 lines of the pilot log: ***
[2026-03-18 18:41:50] 2026-03-18 18:41:06,965 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-18 18:41:50] 2026-03-18 18:41:07,282 | INFO     | PID=1605300 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 18:41:50] 2026-03-18 18:41:07,356 | INFO     | job 7057542673 has state=finished
[2026-03-18 18:41:50] 2026-03-18 18:41:07,356 | INFO     | preparing for final server update for job 7057542673 in state='finished'
[2026-03-18 18:41:50] 2026-03-18 18:41:07,356 | INFO     | reading metadata from: /var/lib/boinc/slots/3/PanDA_Pilot-7057542673/jobReport.json
[2026-03-18 18:41:50] 2026-03-18 18:41:07,358 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/3/workernode_map.json
[2026-03-18 18:41:50] 2026-03-18 18:41:07,358 | INFO     | this job has now completed (state=finished)
[2026-03-18 18:41:50] 2026-03-18 18:41:07,358 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 18:41:50] 2026-03-18 18:41:07,358 | INFO     | log transfer has been attempted: DONE
[2026-03-18 18:41:50] 2026-03-18 18:41:07,358 | INFO     | job 7057542673 has finished - writing final server update
[2026-03-18 18:41:50] 2026-03-18 18:41:07,358 | INFO     | total number of processed events: 400 (read)
[2026-03-18 18:41:50] 2026-03-18 18:41:07,359 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-7057542673/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 18:41:50] 2026-03-18 18:41:07,360 | INFO     | extracted standard info from prmon json
[2026-03-18 18:41:50] 2026-03-18 18:41:07,360 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 18:41:50] 2026-03-18 18:41:07,360 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 18:41:50] 2026-03-18 18:41:07,360 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 18:41:50] 2026-03-18 18:41:07,360 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 18:41:50] 2026-03-18 18:41:07,363 | INFO     | fitting pss+swap vs Time
[2026-03-18 18:41:50] 2026-03-18 18:41:07,363 | INFO     | sum of square deviations: 10842205148.0
[2026-03-18 18:41:50] 2026-03-18 18:41:07,366 | INFO     | sum of deviations: -30606280177.999992
[2026-03-18 18:41:50] 2026-03-18 18:41:07,366 | INFO     | mean x: 1773849257.0
[2026-03-18 18:41:50] 2026-03-18 18:41:07,366 | INFO     | mean y: 2381076.7125382265
[2026-03-18 18:41:50] 2026-03-18 18:41:07,366 | INFO     | intersect: 5009750575.093027
[2026-03-18 18:41:50] 2026-03-18 18:41:07,366 | INFO     | chi2: 1.456087316898215
[2026-03-18 18:41:50] 2026-03-18 18:41:07,367 | INFO     | sum of square deviations: 10352419220.5
[2026-03-18 18:41:50] 2026-03-18 18:41:07,369 | INFO     | sum of deviations: -30386764052.999992
[2026-03-18 18:41:50] 2026-03-18 18:41:07,369 | INFO     | mean x: 1773849104.5
[2026-03-18 18:41:50] 2026-03-18 18:41:07,369 | INFO     | mean y: 2381145.0683229812
[2026-03-18 18:41:50] 2026-03-18 18:41:07,369 | INFO     | intersect: 5209041835.289434
[2026-03-18 18:41:50] 2026-03-18 18:41:07,370 | INFO     | chi2: 1.454738703185463
[2026-03-18 18:41:50] 2026-03-18 18:41:07,370 | INFO     | current chi2=1.454738703185463 (change=0.09261901378446856 %)
[2026-03-18 18:41:50] 2026-03-18 18:41:07,370 | INFO     | right removable region: 321
[2026-03-18 18:41:50] 2026-03-18 18:41:07,370 | INFO     | sum of square deviations: 10352419220.5
[2026-03-18 18:41:50] 2026-03-18 18:41:07,372 | INFO     | sum of deviations: -54625717556.5
[2026-03-18 18:41:50] 2026-03-18 18:41:07,372 | INFO     | mean x: 1773849409.5
[2026-03-18 18:41:50] 2026-03-18 18:41:07,372 | INFO     | mean y: 2388443.9409937887
[2026-03-18 18:41:50] 2026-03-18 18:41:07,372 | INFO     | intersect: 9362306620.286963
[2026-03-18 18:41:50] 2026-03-18 18:41:07,373 | INFO     | chi2: 0.37261500586057633
[2026-03-18 18:41:50] 2026-03-18 18:41:07,373 | INFO     | current chi2=0.37261500586057633 (change=74.40984468882485 %)
[2026-03-18 18:41:50] 2026-03-18 18:41:07,373 | INFO     | sum of square deviations: 9877610318.0
[2026-03-18 18:41:50] 2026-03-18 18:41:07,375 | INFO     | sum of deviations: -38239988842.999985
[2026-03-18 18:41:50] 2026-03-18 18:41:07,375 | INFO     | mean x: 1773849562.0
[2026-03-18 18:41:50] 2026-03-18 18:41:07,375 | INFO     | mean y: 2383179.637223975
[2026-03-18 18:41:50] 2026-03-18 18:41:07,375 | INFO     | intersect: 6869629940.367394
[2026-03-18 18:41:50] 2026-03-18 18:41:07,376 | INFO     | chi2: 0.3044237820342234
[2026-03-18 18:41:50] 2026-03-18 18:41:07,376 | INFO     | current chi2=0.3044237820342234 (change=18.30071863822588 %)
[2026-03-18 18:41:50] 2026-03-18 18:41:07,376 | INFO     | left removable region: 20
[2026-03-18 18:41:50] 2026-03-18 18:41:07,376 | INFO     | sum of square deviations: 8456158550.0
[2026-03-18 18:41:50] 2026-03-18 18:41:07,378 | INFO     | sum of deviations: -2820783777.000002
[2026-03-18 18:41:50] 2026-03-18 18:41:07,378 | INFO     | mean x: 1773849684.0
[2026-03-18 18:41:50] 2026-03-18 18:41:07,378 | INFO     | mean y: 2371027.322259136
[2026-03-18 18:41:50] 2026-03-18 18:41:07,378 | INFO     | intersect: 594087275.5309426
[2026-03-18 18:41:50] 2026-03-18 18:41:07,378 | INFO     | chi2: 0.09080729376342785
[2026-03-18 18:41:50] 2026-03-18 18:41:07,379 | INFO     | current memory leak: -0.33 B/s (using 301 data points, chi2=0.09)
[2026-03-18 18:41:50] 2026-03-18 18:41:07,379 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-03-18 18:41:50] 2026-03-18 18:41:07,379 | INFO     | ..............................
[2026-03-18 18:41:50] 2026-03-18 18:41:07,379 | INFO     | . Timing measurements:
[2026-03-18 18:41:50] 2026-03-18 18:41:07,379 | INFO     | . get job = 0 s
[2026-03-18 18:41:50] 2026-03-18 18:41:07,379 | INFO     | . initial setup = 5 s
[2026-03-18 18:41:50] 2026-03-18 18:41:07,379 | INFO     | . payload setup = 7 s
[2026-03-18 18:41:50] 2026-03-18 18:41:07,379 | INFO     | . stage-in = 0 s
[2026-03-18 18:41:50] 2026-03-18 18:41:07,379 | INFO     | . payload execution = 19946 s
[2026-03-18 18:41:50] 2026-03-18 18:41:07,379 | INFO     | . stage-out = 6 s
[2026-03-18 18:41:50] 2026-03-18 18:41:07,379 | INFO     | . log creation = 0 s
[2026-03-18 18:41:50] 2026-03-18 18:41:07,379 | INFO     | ..............................
[2026-03-18 18:41:50] 2026-03-18 18:41:07,898 | INFO     | 
[2026-03-18 18:41:50] 2026-03-18 18:41:07,899 | INFO     | job summary report
[2026-03-18 18:41:50] 2026-03-18 18:41:07,899 | INFO     | --------------------------------------------------
[2026-03-18 18:41:50] 2026-03-18 18:41:07,899 | INFO     | PanDA job id: 7057542673
[2026-03-18 18:41:50] 2026-03-18 18:41:07,899 | INFO     | task id: 49176370
[2026-03-18 18:41:50] 2026-03-18 18:41:07,899 | INFO     | errors: (none)
[2026-03-18 18:41:50] 2026-03-18 18:41:07,899 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 18:41:50] 2026-03-18 18:41:07,899 | INFO     | pilot state: finished 
[2026-03-18 18:41:50] 2026-03-18 18:41:07,899 | INFO     | transexitcode: 0
[2026-03-18 18:41:50] 2026-03-18 18:41:07,899 | INFO     | exeerrorcode: 0
[2026-03-18 18:41:50] 2026-03-18 18:41:07,899 | INFO     | exeerrordiag: 
[2026-03-18 18:41:50] 2026-03-18 18:41:07,899 | INFO     | exitcode: 0
[2026-03-18 18:41:50] 2026-03-18 18:41:07,899 | INFO     | exitmsg: OK
[2026-03-18 18:41:50] 2026-03-18 18:41:07,899 | INFO     | cpuconsumptiontime: 78264 s
[2026-03-18 18:41:50] 2026-03-18 18:41:07,899 | INFO     | nevents: 400
[2026-03-18 18:41:50] 2026-03-18 18:41:07,899 | INFO     | neventsw: 0
[2026-03-18 18:41:50] 2026-03-18 18:41:07,899 | INFO     | pid: 1609680
[2026-03-18 18:41:50] 2026-03-18 18:41:07,899 | INFO     | pgrp: 1609680
[2026-03-18 18:41:50] 2026-03-18 18:41:07,900 | INFO     | corecount: 4
[2026-03-18 18:41:50] 2026-03-18 18:41:07,900 | INFO     | event service: False
[2026-03-18 18:41:50] 2026-03-18 18:41:07,900 | INFO     | sizes: {0: 2280103, 1: 2280309, 11: 2280337, 19957: 2313800, 19963: 2322854, 19964: 2322992}
[2026-03-18 18:41:50] 2026-03-18 18:41:07,900 | INFO     | --------------------------------------------------
[2026-03-18 18:41:50] 2026-03-18 18:41:07,900 | INFO     | 
[2026-03-18 18:41:50] 2026-03-18 18:41:07,900 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-03-18 18:41:50] 2026-03-18 18:41:07,915 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,916 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,916 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,916 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,916 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,916 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,916 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,916 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,916 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,916 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,916 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,916 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,916 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,916 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,916 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,916 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,917 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 18:41:50] 2026-03-18 18:41:07,917 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,917 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 18:41:50] 2026-03-18 18:41:07,917 | INFO     | job 7057542673 has completed (purged errors)
[2026-03-18 18:41:50] 2026-03-18 18:41:07,917 | INFO     | overall cleanup function is called
[2026-03-18 18:41:50] 2026-03-18 18:41:08,925 | INFO     | --- collectZombieJob: --- 10, [1609680]
[2026-03-18 18:41:50] 2026-03-18 18:41:08,925 | INFO     | zombie collector waiting for pid 1609680
[2026-03-18 18:41:50] 2026-03-18 18:41:08,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 18:41:50] 2026-03-18 18:41:08,925 | INFO     | collected zombie processes
[2026-03-18 18:41:50] 2026-03-18 18:41:08,926 | INFO     | will attempt to kill all subprocesses of pid=1609680
[2026-03-18 18:41:50] 2026-03-18 18:41:08,957 | INFO     | process IDs to be killed: [1609680] (in reverse order)
[2026-03-18 18:41:50] 2026-03-18 18:41:08,988 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 18:41:50] 2026-03-18 18:41:08,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 18:41:50] 2026-03-18 18:41:08,989 | INFO     | did not find any defunct processes belonging to 1609680
[2026-03-18 18:41:50] 2026-03-18 18:41:08,990 | INFO     | did not find any defunct processes belonging to 1609680
[2026-03-18 18:41:50] 2026-03-18 18:41:08,990 | INFO     | ready for new job
[2026-03-18 18:41:50] 2026-03-18 18:41:08,990 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 18:41:50] 2026-03-18 18:41:08,992 | INFO     | **************************************
[2026-03-18 18:41:50] 2026-03-18 18:41:08,993 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 18:41:50] 2026-03-18 18:41:08,993 | INFO     | **************************************
[2026-03-18 18:41:50] 2026-03-18 18:41:08,993 | INFO     | 
[2026-03-18 18:41:50] 2026-03-18 18:41:08,993 | INFO     | pilot is running in a VM
[2026-03-18 18:41:50] 2026-03-18 18:41:08,993 | INFO     | architecture information:
[2026-03-18 18:41:50] 2026-03-18 18:41:08,993 | INFO     | executing command: cat /etc/os-release
[2026-03-18 18:41:50] 2026-03-18 18:41:09,003 | INFO     | cat /etc/os-release:
[2026-03-18 18:41:50] NAME="CentOS Linux"
[2026-03-18 18:41:50] VERSION="7 (Core)"
[2026-03-18 18:41:50] ID="centos"
[2026-03-18 18:41:50] ID_LIKE="rhel fedora"
[2026-03-18 18:41:50] VERSION_ID="7"
[2026-03-18 18:41:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 18:41:50] ANSI_COLOR="0;31"
[2026-03-18 18:41:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 18:41:50] HOME_URL="https://www.centos.org/"
[2026-03-18 18:41:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 18:41:50] 
[2026-03-18 18:41:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 18:41:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 18:41:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 18:41:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 18:41:50] 
[2026-03-18 18:41:50] 2026-03-18 18:41:09,004 | INFO     | **************************************
[2026-03-18 18:41:50] 2026-03-18 18:41:09,506 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-03-18 18:41:50] 2026-03-18 18:41:09,519 | INFO     | sufficient remaining disk space (150832414720 B)
[2026-03-18 18:41:50] 2026-03-18 18:41:09,519 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 18:41:50] 2026-03-18 18:41:09,519 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 18:41:50] 2026-03-18 18:41:09,519 | INFO     | update_server=False
[2026-03-18 18:41:50] 2026-03-18 18:41:09,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 18:41:50] 2026-03-18 18:41:09,521 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 18:41:50] 2026-03-18 18:41:10,008 | INFO     | all job control threads have been joined
[2026-03-18 18:41:50] 2026-03-18 18:41:10,074 | INFO     | all data control threads have been joined
[2026-03-18 18:41:50] 2026-03-18 18:41:10,222 | INFO     | all payload control threads have been joined
[2026-03-18 18:41:50] 2026-03-18 18:41:10,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 18:41:50] 2026-03-18 18:41:10,474 | INFO     | aborting loop
[2026-03-18 18:41:50] 2026-03-18 18:41:10,525 | INFO     | [job] retrieve thread has finished
[2026-03-18 18:41:50] 2026-03-18 18:41:10,563 | INFO     | [job] validate thread has finished
[2026-03-18 18:41:50] 2026-03-18 18:41:10,682 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 18:41:50] 2026-03-18 18:41:10,918 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 18:41:50] 2026-03-18 18:41:10,946 | INFO     | [payload] validate_post thread has finished
[2026-03-18 18:41:50] 2026-03-18 18:41:11,013 | INFO     | [job] control thread has finished
[2026-03-18 18:41:50] 2026-03-18 18:41:11,017 | INFO     | [data] copytool_in thread has finished
[2026-03-18 18:41:50] 2026-03-18 18:41:11,079 | INFO     | [data] control thread has finished
[2026-03-18 18:41:50] 2026-03-18 18:41:11,102 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 18:41:50] 2026-03-18 18:41:11,227 | INFO     | [payload] control thread has finished
[2026-03-18 18:41:50] 2026-03-18 18:41:11,355 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 18:41:50] 2026-03-18 18:41:11,479 | INFO     | [job] job monitor thread has finished
[2026-03-18 18:41:50] 2026-03-18 18:41:11,527 | INFO     | [data] copytool_out thread has finished
[2026-03-18 18:41:50] 2026-03-18 18:41:11,899 | INFO     | [payload] failed_post thread has finished
[2026-03-18 18:41:50] 2026-03-18 18:41:12,438 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 18:41:50] 2026-03-18 18:41:12,573 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 18:41:50] 2026-03-18 18:41:13,440 | INFO     | [job] queue monitor thread has finished
[2026-03-18 18:41:50] 2026-03-18 18:41:16,579 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 18:41:50] 2026-03-18 18:41:39,404 | INFO     | PID=1605300 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 18:41:50] 2026-03-18 18:41:39,404 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 18:41:50] 2026-03-18 18:41:39,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 18:41:50] 2026-03-18 18:41:39,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 18:41:50] 2026-03-18 18:41:44,689 | INFO     | [monitor] cgroup control has ended
[2026-03-18 18:41:50] 2026-03-18 18:41:44,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139905943177024)>', '<ExcThread(monitor, started 139905506195200)>']
[2026-03-18 18:41:50] 2026-03-18 18:41:45,435 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 18:41:50] 2026-03-18 18:41:45,435 | INFO     | [monitor] control thread has ended
[2026-03-18 18:41:50] 2026-03-18 18:41:49,919 | INFO     | all workflow threads have been joined
[2026-03-18 18:41:50] 2026-03-18 18:41:49,919 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 18:41:50] 2026-03-18 18:41:49,920 | INFO     | traces error code: 0
[2026-03-18 18:41:50] 2026-03-18 18:41:49,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 18:41:50] 2026-03-18 18:41:49,998 [wrapper] ==== pilot stdout END ====
[2026-03-18 18:41:50] 2026-03-18 18:41:50,000 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 18:41:50] 2026-03-18 18:41:50,002 [wrapper] pilotpid: 1605300
[2026-03-18 18:41:50] 2026-03-18 18:41:50,004 [wrapper] Pilot exit status: 0
[2026-03-18 18:41:50] 2026-03-18 18:41:50,013 [wrapper] pandaids: 7057542673
[2026-03-18 18:41:50] 2026-03-18 18:41:50,030 [wrapper] cleanup supervisor_pilot 1615738 1605301
[2026-03-18 18:41:50] 2026-03-18 18:41:50,032 [wrapper] Test setup, not cleaning
[2026-03-18 18:41:50] 2026-03-18 18:41:50,034 [wrapper] apfmon messages muted
[2026-03-18 18:41:50] 2026-03-18 18:41:50,037 [wrapper] ==== wrapper stdout END ====
[2026-03-18 18:41:50] 2026-03-18 18:41:50,039 [wrapper] ==== wrapper stderr END ====
[2026-03-18 18:41:50]  *** Error codes and diagnostics ***
[2026-03-18 18:41:50]     "exeErrorCode": 0,
[2026-03-18 18:41:50]     "exeErrorDiag": "",
[2026-03-18 18:41:50]     "pilotErrorCode": 0,
[2026-03-18 18:41:50]     "pilotErrorDiag": "",
[2026-03-18 18:41:50]  *** Listing of results directory ***
[2026-03-18 18:41:50] total 457512
[2026-03-18 18:41:50] -rw-r--r-- 1 boinc boinc    585013 Mar 17 21:36 pilot3.tar.gz
[2026-03-18 18:41:50] -rwx------ 1 boinc boinc     36322 Mar 17 21:39 runpilot2-wrapper.sh
[2026-03-18 18:41:50] -rw-r--r-- 1 boinc boinc      5111 Mar 17 21:40 queuedata.json
[2026-03-18 18:41:50] -rw-r--r-- 1 boinc boinc       100 Mar 18 13:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 18:41:50] -rwxr-xr-x 1 boinc boinc      7986 Mar 18 13:07 run_atlas
[2026-03-18 18:41:50] -rw-r--r-- 1 boinc boinc       105 Mar 18 13:07 job.xml
[2026-03-18 18:41:50] -rw-r--r-- 2 boinc boinc     15845 Mar 18 13:07 start_atlas.sh
[2026-03-18 18:41:50] drwxrwx--x 2 boinc boinc      4096 Mar 18 13:07 shared
[2026-03-18 18:41:50] -rw-r--r-- 2 boinc boinc    597540 Mar 18 13:07 input.tar.gz
[2026-03-18 18:41:50] -rw-r--r-- 2 boinc boinc 239613254 Mar 18 13:07 EVNT.49133711._000008.pool.root.1
[2026-03-18 18:41:50] -rw-r--r-- 1 boinc boinc         0 Mar 18 13:07 boinc_setup_complete
[2026-03-18 18:41:50] -rw-r--r-- 1 boinc boinc      5960 Mar 18 13:07 init_data.xml
[2026-03-18 18:41:50] -rw-r--r-- 1 boinc boinc         0 Mar 18 13:07 boinc_lockfile
[2026-03-18 18:41:50] -rw-r--r-- 1 boinc boinc      2621 Mar 18 13:07 pandaJob.out
[2026-03-18 18:41:50] -rw------- 1 boinc boinc   1010909 Mar 18 13:08 agis_schedconf.cvmfs.json
[2026-03-18 18:41:50] -rw------- 1 boinc boinc       406 Mar 18 13:08 workernode_map.json
[2026-03-18 18:41:50] drwx------ 5 boinc boinc      4096 Mar 18 13:08 pilot3
[2026-03-18 18:41:50] -rw------- 1 boinc boinc 218436658 Mar 18 18:40 HITS.49176370._000178.pool.root.1
[2026-03-18 18:41:50] -rw-r--r-- 1 boinc boinc       530 Mar 18 18:40 boinc_task_state.xml
[2026-03-18 18:41:50] -rw------- 1 boinc boinc      1010 Mar 18 18:40 memory_monitor_summary.json
[2026-03-18 18:41:50] -rw------- 1 boinc boinc        95 Mar 18 18:40 pilot_heartbeat.json
[2026-03-18 18:41:50] -rw------- 1 boinc boinc   1511579 Mar 18 18:41 agis_ddmendpoints.agis.ALL.json
[2026-03-18 18:41:50] -rw------- 1 boinc boinc    452981 Mar 18 18:41 log.49176370._000178.job.log.tgz.1
[2026-03-18 18:41:50] -rw------- 1 boinc boinc      6250 Mar 18 18:41 heartbeat.json
[2026-03-18 18:41:50] -rw-r--r-- 1 boinc boinc      8192 Mar 18 18:41 boinc_mmap_file
[2026-03-18 18:41:50] -rw-r--r-- 1 boinc boinc        28 Mar 18 18:41 wrapper_checkpoint.txt
[2026-03-18 18:41:50] -rw------- 1 boinc boinc      4807 Mar 18 18:41 pilotlog.txt
[2026-03-18 18:41:50] -rw------- 1 boinc boinc   2797433 Mar 18 18:41 log.49176370._000178.job.log.1
[2026-03-18 18:41:50] -rw------- 1 boinc boinc       357 Mar 18 18:41 output.list
[2026-03-18 18:41:50] -rw-r--r-- 1 boinc boinc       620 Mar 18 18:41 runtime_log
[2026-03-18 18:41:50] -rw------- 1 boinc boinc   3266560 Mar 18 18:41 result.tar.gz
[2026-03-18 18:41:50] -rw-r--r-- 1 boinc boinc      8778 Mar 18 18:41 runtime_log.err
[2026-03-18 18:41:50] -rw------- 1 boinc boinc       650 Mar 18 18:41 CNYNDmxJrM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm950LDmm2i6Ln.diag
[2026-03-18 18:41:50] -rw-r--r-- 1 boinc boinc     21436 Mar 18 18:41 stderr.txt
[2026-03-18 18:41:50] HITS file was successfully produced:
[2026-03-18 18:41:50] -rw------- 1 boinc boinc 218436658 Mar 18 18:40 shared/HITS.pool.root.1
[2026-03-18 18:41:50]  *** Contents of shared directory: ***
[2026-03-18 18:41:50] total 451120
[2026-03-18 18:41:50] -rw-r--r-- 2 boinc boinc     15845 Mar 18 13:07 start_atlas.sh
[2026-03-18 18:41:50] -rw-r--r-- 2 boinc boinc    597540 Mar 18 13:07 input.tar.gz
[2026-03-18 18:41:50] -rw-r--r-- 2 boinc boinc 239613254 Mar 18 13:07 ATLAS.root_0
[2026-03-18 18:41:50] -rw------- 1 boinc boinc 218436658 Mar 18 18:40 HITS.pool.root.1
[2026-03-18 18:41:50] -rw------- 1 boinc boinc   3266560 Mar 18 18:41 result.tar.gz
18:41:51 (1601291): run_atlas exited; CPU time 78355.965910
18:41:51 (1601291): called boinc_finish(0)

</stderr_txt>
]]>

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