Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:20:18 (3446774): wrapper (7.7.26015): starting
10:20:18 (3446774): wrapper: running run_atlas (--nthreads 3)
[2026-03-19 10:20:18] Arguments: --nthreads 3
[2026-03-19 10:20:18] Threads: 3
[2026-03-19 10:20:18] Checking for CVMFS
[2026-03-19 10:20:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 10:20:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 10:20:19] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 10:20:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 10:20:19] 2.9.2.0 3151088 3921 78968 157448 2 50 19993471 36864000 0 130560 0 916421 99.970 145392 10185 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-19 10:20:19] CVMFS is ok
[2026-03-19 10:20:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 10:20:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 10:20:19] Further information can be found at the LHC@home message board.
[2026-03-19 10:20:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 10:20:19] Checking for apptainer binary...
[2026-03-19 10:20:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 10:20:19] Running /usr/bin/apptainer --version
[2026-03-19 10:20:19] apptainer version 1.4.1-1.1
[2026-03-19 10:20:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 10:20:19] atlasA223
[2026-03-19 10:20:19] apptainer works
[2026-03-19 10:20:19] Set ATHENA_PROC_NUMBER=3
[2026-03-19 10:20:19] Set ATHENA_CORE_NUMBER=3
[2026-03-19 10:20:19] Starting ATLAS job with PandaID=7041595666
[2026-03-19 10:20:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 11:37:40]  *** The last 200 lines of the pilot log: ***
[2026-03-19 11:37:40] 2026-03-19 10:36:43,449 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 11:37:40] 2026-03-19 10:36:43,597 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 11:37:40] 2026-03-19 10:36:44,131 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 11:37:40] 2026-03-19 10:36:44,131 | INFO     | aborting loop
[2026-03-19 11:37:40] 2026-03-19 10:36:44,245 | INFO     | all data control threads have been joined
[2026-03-19 11:37:40] 2026-03-19 10:36:44,454 | INFO     | [job] retrieve thread has finished
[2026-03-19 11:37:40] 2026-03-19 10:36:44,454 | INFO     | [job] queue monitor thread has finished
[2026-03-19 11:37:40] 2026-03-19 10:36:44,528 | INFO     | [data] copytool_in thread has finished
[2026-03-19 11:37:40] 2026-03-19 10:36:44,554 | INFO     | all payload control threads have been joined
[2026-03-19 11:37:40] 2026-03-19 10:36:44,655 | INFO     | all job control threads have been joined
[2026-03-19 11:37:40] 2026-03-19 10:36:45,022 | INFO     | [payload] failed_post thread has finished
[2026-03-19 11:37:40] 2026-03-19 10:36:45,136 | INFO     | [job] job monitor thread has finished
[2026-03-19 11:37:40] 2026-03-19 10:36:45,247 | INFO     | [data] control thread has finished
[2026-03-19 11:37:40] 2026-03-19 10:36:45,559 | INFO     | [payload] control thread has finished
[2026-03-19 11:37:40] 2026-03-19 10:36:45,604 | INFO     | [data] copytool_out thread has finished
[2026-03-19 11:37:40] 2026-03-19 10:36:45,612 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 11:37:40] 2026-03-19 10:36:45,661 | INFO     | [job] control thread has finished
[2026-03-19 11:37:40] 2026-03-19 10:36:45,682 | INFO     | [job] validate thread has finished
[2026-03-19 11:37:40] 2026-03-19 10:36:45,781 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 11:37:40] 2026-03-19 10:36:45,813 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 11:37:40] 2026-03-19 10:36:45,941 | INFO     | [payload] validate_post thread has finished
[2026-03-19 11:37:40] 2026-03-19 10:36:47,454 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 11:37:40] 2026-03-19 10:36:53,634 | INFO     | job.realtimelogging is not enabled
[2026-03-19 11:37:40] 2026-03-19 10:36:54,640 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 11:37:40] 2026-03-19 10:37:13,528 | INFO     | PID=3450818 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 11:37:40] 2026-03-19 10:37:13,529 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 11:37:40] 2026-03-19 10:37:13,529 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 11:37:40] 2026-03-19 10:37:13,529 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 11:37:40] 2026-03-19 10:37:33,488 | INFO     | [monitor] cgroup control has ended
[2026-03-19 11:37:40] 2026-03-19 10:37:34,861 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139874816030528)>', '<ExcThread(monitor, started 139874166355712)>']
[2026-03-19 11:37:40] 2026-03-19 10:37:35,640 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 11:37:40] 2026-03-19 10:37:35,640 | INFO     | [monitor] control thread has ended
[2026-03-19 11:37:40] 2026-03-19 10:37:39,886 | INFO     | all workflow threads have been joined
[2026-03-19 11:37:40] 2026-03-19 10:37:39,886 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 11:37:40] 2026-03-19 10:37:39,886 | INFO     | traces error code: 0
[2026-03-19 11:37:40] 2026-03-19 10:37:39,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 11:37:40] 2026-03-19 10:37:39,937 [wrapper] ==== pilot stdout END ====
[2026-03-19 11:37:40] 2026-03-19 10:37:39,940 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 11:37:40] 2026-03-19 10:37:39,942 [wrapper] pilotpid: 3450818
[2026-03-19 11:37:40] 2026-03-19 10:37:39,944 [wrapper] Pilot exit status: 0
[2026-03-19 11:37:40] 2026-03-19 10:37:39,951 [wrapper] pandaids: 7041595666
[2026-03-19 11:37:40] 2026-03-19 10:37:39,969 [wrapper] cleanup supervisor_pilot 3460645 3450819
[2026-03-19 11:37:40] 2026-03-19 10:37:39,972 [wrapper] Test setup, not cleaning
[2026-03-19 11:37:40] 2026-03-19 10:37:39,974 [wrapper] apfmon messages muted
[2026-03-19 11:37:40] 2026-03-19 10:37:39,977 [wrapper] ==== wrapper stdout END ====
[2026-03-19 11:37:40] 2026-03-19 10:37:39,979 [wrapper] ==== wrapper stderr END ====
[2026-03-19 11:37:40]  *** Error codes and diagnostics ***
[2026-03-19 11:37:40]     "exeErrorCode": 0,
[2026-03-19 11:37:40]     "exeErrorDiag": "",
[2026-03-19 11:37:40]     "pilotErrorCode": 0,
[2026-03-19 11:37:40]     "pilotErrorDiag": "",
[2026-03-19 11:37:40]  *** Listing of results directory ***
[2026-03-19 11:37:40] total 606960
[2026-03-19 11:37:40] -rw-r--r-- 1 boinc boinc      5111 Mar 10 04:18 queuedata.json
[2026-03-19 11:37:40] -rw-r--r-- 1 boinc boinc    584627 Mar 10 04:18 pilot3.tar.gz
[2026-03-19 11:37:40] -rwx------ 1 boinc boinc     36322 Mar 10 04:18 runpilot2-wrapper.sh
[2026-03-19 11:37:40] -rw-r--r-- 1 boinc boinc       100 Mar 19 10:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 11:37:40] -rwxr-xr-x 1 boinc boinc      7986 Mar 19 10:20 run_atlas
[2026-03-19 11:37:40] -rw-r--r-- 1 boinc boinc       105 Mar 19 10:20 job.xml
[2026-03-19 11:37:40] -rw-r--r-- 2 boinc boinc 439575653 Mar 19 10:20 EVNT.46701403._001431.pool.root.1
[2026-03-19 11:37:40] -rw-r--r-- 2 boinc boinc    597948 Mar 19 10:20 input.tar.gz
[2026-03-19 11:37:40] -rw-r--r-- 2 boinc boinc     15845 Mar 19 10:20 start_atlas.sh
[2026-03-19 11:37:40] drwxrwx--x 2 boinc boinc      4096 Mar 19 10:20 shared
[2026-03-19 11:37:40] -rw-r--r-- 1 boinc boinc         0 Mar 19 10:20 boinc_setup_complete
[2026-03-19 11:37:40] -rw-r--r-- 1 boinc boinc      6446 Mar 19 10:20 init_data.xml
[2026-03-19 11:37:40] -rw-r--r-- 1 boinc boinc         0 Mar 19 10:20 boinc_lockfile
[2026-03-19 11:37:40] -rw-r--r-- 1 boinc boinc      2563 Mar 19 10:20 pandaJob.out
[2026-03-19 11:37:40] -rw------- 1 boinc boinc   1010816 Mar 19 10:20 agis_schedconf.cvmfs.json
[2026-03-19 11:37:40] -rw------- 1 boinc boinc   1511579 Mar 19 10:20 agis_ddmendpoints.agis.ALL.json
[2026-03-19 11:37:40] -rw------- 1 boinc boinc       425 Mar 19 10:20 workernode_map.json
[2026-03-19 11:37:40] drwx------ 5 boinc boinc      4096 Mar 19 10:20 pilot3
[2026-03-19 11:37:40] -rw------- 1 boinc boinc 176098797 Mar 19 11:36 HITS.48955010._021686.pool.root.1
[2026-03-19 11:37:40] -rw-r--r-- 1 boinc boinc       530 Mar 19 11:36 boinc_task_state.xml
[2026-03-19 11:37:40] -rw------- 1 boinc boinc      1024 Mar 19 11:36 memory_monitor_summary.json
[2026-03-19 11:37:40] -rw------- 1 boinc boinc    287465 Mar 19 11:36 log.48955010._021686.job.log.tgz.1
[2026-03-19 11:37:40] -rw------- 1 boinc boinc      6320 Mar 19 11:36 heartbeat.json
[2026-03-19 11:37:40] -rw-r--r-- 1 boinc boinc      8192 Mar 19 11:37 boinc_mmap_file
[2026-03-19 11:37:40] -rw-r--r-- 1 boinc boinc        27 Mar 19 11:37 wrapper_checkpoint.txt
[2026-03-19 11:37:40] -rw------- 1 boinc boinc        95 Mar 19 11:37 pilot_heartbeat.json
[2026-03-19 11:37:40] -rw------- 1 boinc boinc      4820 Mar 19 11:37 pilotlog.txt
[2026-03-19 11:37:40] -rw------- 1 boinc boinc    675168 Mar 19 11:37 log.48955010._021686.job.log.1
[2026-03-19 11:37:40] -rw------- 1 boinc boinc       357 Mar 19 11:37 output.list
[2026-03-19 11:37:40] -rw-r--r-- 1 boinc boinc       620 Mar 19 11:37 runtime_log
[2026-03-19 11:37:40] -rw------- 1 boinc boinc    983040 Mar 19 11:37 result.tar.gz
[2026-03-19 11:37:40] -rw-r--r-- 1 boinc boinc      8911 Mar 19 11:37 runtime_log.err
[2026-03-19 11:37:40] -rw------- 1 boinc boinc       660 Mar 19 11:37 TjgKDmDn2J9n9Rq4apOajLDm4fhM0noT9bVooX4SDm8ybLDmCWepMn.diag
[2026-03-19 11:37:40] -rw-r--r-- 1 boinc boinc      7163 Mar 19 11:37 stderr.txt
[2026-03-19 11:37:40] HITS file was successfully produced:
[2026-03-19 11:37:40] -rw------- 1 boinc boinc 176098797 Mar 19 11:36 shared/HITS.pool.root.1
[2026-03-19 11:37:40]  *** Contents of shared directory: ***
[2026-03-19 11:37:40] total 602816
[2026-03-19 11:37:40] -rw-r--r-- 2 boinc boinc 439575653 Mar 19 10:20 ATLAS.root_0
[2026-03-19 11:37:40] -rw-r--r-- 2 boinc boinc    597948 Mar 19 10:20 input.tar.gz
[2026-03-19 11:37:40] -rw-r--r-- 2 boinc boinc     15845 Mar 19 10:20 start_atlas.sh
[2026-03-19 11:37:40] -rw------- 1 boinc boinc 176098797 Mar 19 11:36 HITS.pool.root.1
[2026-03-19 11:37:40] -rw------- 1 boinc boinc    983040 Mar 19 11:37 result.tar.gz
11:37:41 (3446774): run_atlas exited; CPU time 12779.709866
11:37:41 (3446774): called boinc_finish(0)

</stderr_txt>
]]>

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