Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-21 06:56:33 (14524): vboxwrapper version 26210
2026-03-21 06:56:33 (14524): BOINC client version: 8.2.4
2026-03-21 06:56:34 (14524): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2026-03-21 06:56:34 (14524): Successfully copied 'init_data.xml' to the shared directory.
2026-03-21 06:56:34 (14524): Create VM. (boinc_366075d25b77b52c, slot#4)
2026-03-21 06:56:35 (14524): Setting Memory Size for VM. (4200MB)
2026-03-21 06:56:35 (14524): Setting CPU Count for VM. (2)
2026-03-21 06:56:35 (14524): Setting Chipset Options for VM.
2026-03-21 06:56:36 (14524): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-21 06:56:36 (14524): Setting Boot Options for VM.
2026-03-21 06:56:36 (14524): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-21 06:56:37 (14524): Enabling VM Network Access.
2026-03-21 06:56:37 (14524): Disabling USB Support for VM.
2026-03-21 06:56:37 (14524): Disabling COM Port Support for VM.
2026-03-21 06:56:37 (14524): Disabling LPT Port Support for VM.
2026-03-21 06:56:38 (14524): Disabling Audio Support for VM.
2026-03-21 06:56:38 (14524): Disabling Clipboard Support for VM.
2026-03-21 06:56:38 (14524): Disabling Drag and Drop Support for VM.
2026-03-21 06:56:38 (14524): Adding storage controller(s) to VM.
2026-03-21 06:56:39 (14524): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-21 06:56:39 (14524): Adding VirtualBox Guest Additions to VM.
2026-03-21 06:56:39 (14524): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-21 06:56:40 (14524): forwarding host port 56998 to guest port 80
2026-03-21 06:56:40 (14524): Enabling remote desktop for VM.
2026-03-21 06:56:40 (14524): Required extension pack not installed, remote desktop not enabled.
2026-03-21 06:56:40 (14524): Enabling shared directory for VM.
2026-03-21 06:56:41 (14524): Starting VM using VBoxManage interface. (boinc_366075d25b77b52c, slot#4)
2026-03-21 06:56:46 (14524): Successfully started VM. (PID = '21388')
2026-03-21 06:56:46 (14524): Reporting VM Process ID to BOINC.
2026-03-21 06:56:46 (14524): Guest Log: BIOS: VirtualBox 7.1.10
2026-03-21 06:56:46 (14524): Guest Log: CPUID EDX: 0x178bfbff
2026-03-21 06:56:46 (14524): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-21 06:56:46 (14524): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-21 06:56:46 (14524): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-21 06:56:46 (14524): Detected: Web Application Enabled (http://localhost:56998)
2026-03-21 06:56:46 (14524): Preference change detected
2026-03-21 06:56:46 (14524): Setting CPU throttle for VM. (60%)
2026-03-21 06:56:46 (14524): Setting checkpoint interval to 18000 seconds. (Higher value of (Preference: 18000 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-21 06:56:48 (14524): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-21 06:56:48 (14524): Guest Log: BIOS: Booting from Hard Disk...
2026-03-21 06:56:51 (14524): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-21 06:56:51 (14524): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-21 06:56:51 (14524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-21 06:56:57 (14524): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-21 06:56:57 (14524): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-21 06:57:06 (14524): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-21 06:57:06 (14524): Guest Log: 00:00:00.000169 main     Log opened 2026-03-21T06:57:05.268753000Z
2026-03-21 06:57:06 (14524): Guest Log: 00:00:00.000235 main     OS Product: Linux
2026-03-21 06:57:06 (14524): Guest Log: 00:00:00.000262 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-21 06:57:06 (14524): Guest Log: 00:00:00.000284 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-21 06:57:06 (14524): Guest Log: 00:00:00.000304 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-21 06:57:06 (14524): Guest Log: 00:00:00.000305 main     Process ID: 1288
2026-03-21 06:57:06 (14524): Guest Log: 00:00:00.000305 main     Package type: LINUX_64BITS_GENERIC
2026-03-21 06:57:06 (14524): Guest Log: 00:00:00.001438 main     5.2.32 r132073 started. Verbose level = 0
2026-03-21 06:57:06 (14524): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-21 06:57:06 (14524): Guest Log: [INFO] Mounting shared directory
2026-03-21 06:57:06 (14524): Guest Log: [INFO] Checking for init_data.xml
2026-03-21 06:57:16 (14524): Guest Log: 00:00:10.007712 timesync vgsvcTimeSyncWorker: Radical guest time change: -46 789 365 799 000ns (GuestNow=1 774 029 435 906 717 000 ns GuestLast=1 774 076 225 272 516 000 ns fSetTimeLastLoop=true )
2026-03-21 06:57:17 (14524): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-21 06:57:17 (14524): Guest Log: [INFO] Detected branch: prod
2026-03-21 06:57:18 (14524): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-21 06:57:18 (14524): Guest Log: Copying input files
2026-03-21 06:57:23 (14524): Guest Log: Copied input files into RunAtlas.
2026-03-21 06:57:23 (14524): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-21 06:57:23 (14524): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-21 06:57:23 (14524): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-21 06:57:23 (14524): Guest Log: Further information can be found at the LHC@home message board.
2026-03-21 06:57:40 (14524): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-21 06:57:41 (14524): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-21 06:57:41 (14524): Guest Log: 2.6.3.0 1566 0 32180 157510 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-21 06:57:42 (14524): Guest Log: copied the webapp to /var/www
2026-03-21 06:57:42 (14524): Guest Log: ATHENA_PROC_NUMBER=2
2026-03-21 06:57:42 (14524): Guest Log: ATHENA_CORE_NUMBER=2
2026-03-21 06:57:42 (14524): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-21 06:57:42 (14524): Guest Log:  *** Starting ATLAS job. (PandaID=7041592465 taskID=48955006) ***
2026-03-21 08:36:49 (14524): Status Report: Elapsed Time: '6000.000000'
2026-03-21 08:36:49 (14524): Status Report: CPU Time: '6641.078125'
2026-03-21 10:16:53 (14524): Status Report: Elapsed Time: '12000.000000'
2026-03-21 10:16:53 (14524): Status Report: CPU Time: '13883.390625'
2026-03-21 11:51:14 (14524): Guest Log:  *** Job finished ***
2026-03-21 11:51:14 (14524): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:04,944 | INFO     | PID=5950 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:04,944 | INFO     | found 0 job(s) in 20 queues
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:04,944 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:04,944 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:04,944 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:04,944 | INFO     | [monitor] control thread has ended
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:07,387 | INFO     | all workflow threads have been joined
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:07,387 | INFO     | end of generic workflow (traces error code: 0)
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:07,387 | INFO     | traces error code: 0
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:07,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:07,448 [wrapper] ==== pilot stdout END ====
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:07,451 [wrapper] ==== wrapper stdout RESUME ====
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:07,459 [wrapper] pilotpid: 5950
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:07,473 [wrapper] Pilot exit status: 0
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:07,749 [wrapper] pandaids: 7041592465
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:07,832 [wrapper] cleanup supervisor_pilot 28378 5951
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:07,847 [wrapper] Test setup, not cleaning
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:07,851 [wrapper] apfmon messages muted
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:07,854 [wrapper] ==== wrapper stdout END ====
2026-03-21 11:51:14 (14524): Guest Log: 2026-03-20 22:51:07,857 [wrapper] ==== wrapper stderr END ====
2026-03-21 11:51:14 (14524): Guest Log:  *** Error codes and diagnostics ***
2026-03-21 11:51:14 (14524): Guest Log:     "exeErrorCode": 0,
2026-03-21 11:51:14 (14524): Guest Log:     "exeErrorDiag": "",
2026-03-21 11:51:14 (14524): Guest Log:     "pilotErrorCode": 0,
2026-03-21 11:51:14 (14524): Guest Log:     "pilotErrorDiag": "",
2026-03-21 11:51:14 (14524): Guest Log:  *** Listing of results directory ***
2026-03-21 11:51:14 (14524): Guest Log: total 181532
2026-03-21 11:51:14 (14524): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar 10 02:23 pilot3.tar.gz
2026-03-21 11:51:14 (14524): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 10 02:24 queuedata.json
2026-03-21 11:51:14 (14524): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 10 02:24 runpilot2-wrapper.sh
2026-03-21 11:51:14 (14524): Guest Log: -rwxr-xr-x. 1 atlas atlas      9016 Mar 20 17:57 init_data.xml
2026-03-21 11:51:14 (14524): Guest Log: -rwxr-xr-x. 1 atlas atlas    597956 Mar 20 17:57 input.tar.gz
2026-03-21 11:51:14 (14524): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 20 17:57 start_atlas.sh
2026-03-21 11:51:14 (14524): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 20 17:57 EVNT.46701403._000758.pool.root.1 -> /data/./ATLAS.root_0
2026-03-21 11:51:14 (14524): Guest Log: -rw-r--r--. 1 atlas atlas      2565 Mar 20 17:57 pandaJob.out
2026-03-21 11:51:14 (14524): Guest Log: -rw-------. 1 atlas atlas   1010679 Mar 20 17:59 agis_schedconf.cvmfs.json
2026-03-21 11:51:14 (14524): Guest Log: -rw-------. 1 atlas atlas       411 Mar 20 17:59 workernode_map.json
2026-03-21 11:51:14 (14524): Guest Log: drwx------. 5 atlas atlas      4096 Mar 20 17:59 pilot3
2026-03-21 11:51:14 (14524): Guest Log: -rw-------. 1 atlas atlas 176399094 Mar 20 22:49 HITS.48955006._037934.pool.root.1
2026-03-21 11:51:14 (14524): Guest Log: -rw-------. 1 atlas atlas      1029 Mar 20 22:50 memory_monitor_summary.json
2026-03-21 11:51:14 (14524): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 20 22:50 agis_ddmendpoints.agis.ALL.json
2026-03-21 11:51:14 (14524): Guest Log: -rw-------. 1 atlas atlas    431076 Mar 20 22:50 log.48955006._037934.job.log.tgz.1
2026-03-21 11:51:14 (14524): Guest Log: -rw-------. 1 atlas atlas        95 Mar 20 22:50 pilot_heartbeat.json
2026-03-21 11:51:14 (14524): Guest Log: -rw-------. 1 atlas atlas      6341 Mar 20 22:50 heartbeat.json
2026-03-21 11:51:14 (14524): Guest Log: -rw-------. 1 atlas atlas      4801 Mar 20 22:51 pilotlog.txt
2026-03-21 11:51:14 (14524): Guest Log: -rw-------. 1 atlas atlas   2378450 Mar 20 22:51 log.48955006._037934.job.log.1
2026-03-21 11:51:14 (14524): Guest Log: -rw-------. 1 atlas atlas       357 Mar 20 22:51 output.list
2026-03-21 11:51:14 (14524): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 20 22:51 runtime_log
2026-03-21 11:51:14 (14524): Guest Log: -rw-------. 1 atlas atlas   2826240 Mar 20 22:51 result.tar.gz
2026-03-21 11:51:14 (14524): Guest Log: -rw-r--r--. 1 atlas atlas      8733 Mar 20 22:51 runtime_log.err
2026-03-21 11:51:14 (14524): Guest Log: -rw-------. 1 atlas atlas       654 Mar 20 22:51 q8MKDmlw1J9n9Rq4apOajLDm4fhM0noT9bVooX4SDmmqbLDmfZQU8n.diag
2026-03-21 11:51:14 (14524): Guest Log: Looking for outputfile HITS.48955006._037934.pool.root.1
2026-03-21 11:51:14 (14524): Guest Log: HITS file was successfully produced
2026-03-21 11:51:14 (14524): Guest Log: -rw-------. 1 atlas atlas 176399094 Mar 20 22:49 /home/atlas/RunAtlas/HITS.48955006._037934.pool.root.1
2026-03-21 11:51:15 (14524): Guest Log: Successfully finished the ATLAS job!
2026-03-21 11:51:15 (14524): Guest Log: Copying the results back to the shared directory!
2026-03-21 11:51:16 (14524): Guest Log:  *** Contents of shared directory: ***
2026-03-21 11:51:16 (14524): Guest Log: total 608056
2026-03-21 11:51:16 (14524): Guest Log: -rwxrwxrwx. 1 root root 442790899 Mar 20 17:56 ATLAS.root_0
2026-03-21 11:51:16 (14524): Guest Log: -rwxrwxrwx. 1 root root 176399094 Mar 20 22:51 HITS.pool.root.1
2026-03-21 11:51:16 (14524): Guest Log: -rwxrwxrwx. 1 root root      9016 Mar 20 17:56 init_data.xml
2026-03-21 11:51:16 (14524): Guest Log: -rwxrwxrwx. 1 root root    597956 Mar 18 06:01 input.tar.gz
2026-03-21 11:51:16 (14524): Guest Log: -rwxrwxrwx. 1 root root   2826240 Mar 20 22:51 result.tar.gz
2026-03-21 11:51:16 (14524): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 18 06:01 start_atlas.sh
2026-03-21 11:51:16 (14524): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-21 11:51:16 (14524): VM Completion File Detected.
2026-03-21 11:51:16 (14524): Powering off VM.
2026-03-21 11:51:16 (14524): Successfully stopped VM.
2026-03-21 11:51:16 (14524): Deregistering VM. (boinc_366075d25b77b52c, slot#4)
2026-03-21 11:51:16 (14524): Removing network bandwidth throttle group from VM.
2026-03-21 11:51:17 (14524): Removing VM from VirtualBox.
2026-03-21 11:51:22 (14524): called boinc_finish(0)

</stderr_txt>
]]>

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