Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:56:12 (3972606): wrapper (7.7.26015): starting
04:56:12 (3972606): wrapper: running run_atlas (--nthreads 4)
[2026-03-25 04:56:12] Arguments: --nthreads 4
[2026-03-25 04:56:12] Threads: 4
[2026-03-25 04:56:12] Checking for CVMFS
[2026-03-25 04:56:12] No cvmfs_config command found, will try listing directly
[2026-03-25 04:56:12] CVMFS is ok
[2026-03-25 04:56:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 04:56:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 04:56:12] Further information can be found at the LHC@home message board.
[2026-03-25 04:56:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 04:56:12] Checking for apptainer binary...
[2026-03-25 04:56:12] which: no apptainer in ((null))
[2026-03-25 04:56:12] apptainer is not installed, using version from CVMFS
[2026-03-25 04:56:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 04:56:12] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-03-25 04:56:12] apptainer works
[2026-03-25 04:56:12] Set ATHENA_PROC_NUMBER=4
[2026-03-25 04:56:12] Set ATHENA_CORE_NUMBER=4
[2026-03-25 04:56:12] Starting ATLAS job with PandaID=7057544237
[2026-03-25 04:56:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 11:59:56]  *** The last 200 lines of the pilot log: ***
[2026-03-25 11:59:56] 2026-03-25 10:58:36,064 | INFO     | mean y: 2333331.4144578315
[2026-03-25 11:59:56] 2026-03-25 10:58:36,064 | INFO     | intersect: -4305612502.514808
[2026-03-25 11:59:56] 2026-03-25 10:58:36,065 | INFO     | chi2: 2.1415659635433113
[2026-03-25 11:59:56] 2026-03-25 10:58:36,065 | INFO     | sum of square deviations: 21371140862.497494
[2026-03-25 11:59:56] 2026-03-25 10:58:36,070 | INFO     | sum of deviations: 79125956093.50742
[2026-03-25 11:59:56] 2026-03-25 10:58:36,070 | INFO     | mean x: 1774423504.502439
[2026-03-25 11:59:56] 2026-03-25 10:58:36,070 | INFO     | mean y: 2338160.992682927
[2026-03-25 11:59:56] 2026-03-25 10:58:36,070 | INFO     | intersect: -6567407329.522027
[2026-03-25 11:59:56] 2026-03-25 10:58:36,071 | INFO     | chi2: 1.3508918483898524
[2026-03-25 11:59:56] 2026-03-25 10:58:36,071 | INFO     | current chi2=1.3508918483898524 (change=36.920371756621265 %)
[2026-03-25 11:59:56] 2026-03-25 10:58:36,071 | INFO     | sum of square deviations: 20598763894.99742
[2026-03-25 11:59:56] 2026-03-25 10:58:36,075 | INFO     | sum of deviations: 77931991098.75803
[2026-03-25 11:59:56] 2026-03-25 10:58:36,076 | INFO     | mean x: 1774423352.002469
[2026-03-25 11:59:56] 2026-03-25 10:58:36,076 | INFO     | mean y: 2337925.241975309
[2026-03-25 11:59:56] 2026-03-25 10:58:36,076 | INFO     | intersect: -6710897178.504627
[2026-03-25 11:59:56] 2026-03-25 10:58:36,076 | INFO     | chi2: 1.3509541797620066
[2026-03-25 11:59:56] 2026-03-25 10:58:36,076 | INFO     | current chi2=1.3509541797620066 (change=-0.004614090478705684 %)
[2026-03-25 11:59:56] 2026-03-25 10:58:36,076 | INFO     | right removable region: 404
[2026-03-25 11:59:56] 2026-03-25 10:58:36,077 | INFO     | sum of square deviations: 21371140252.497498
[2026-03-25 11:59:56] 2026-03-25 10:58:36,081 | INFO     | sum of deviations: -1271910698.121952
[2026-03-25 11:59:56] 2026-03-25 10:58:36,081 | INFO     | mean x: 1774423809.502439
[2026-03-25 11:59:56] 2026-03-25 10:58:36,082 | INFO     | mean y: 2343880.1219512196
[2026-03-25 11:59:56] 2026-03-25 10:58:36,082 | INFO     | intersect: 107949318.0931288
[2026-03-25 11:59:56] 2026-03-25 10:58:36,082 | INFO     | chi2: 0.8104077205239995
[2026-03-25 11:59:56] 2026-03-25 10:58:36,082 | INFO     | current chi2=0.8104077205239995 (change=62.15817143530123 %)
[2026-03-25 11:59:56] 2026-03-25 10:58:36,083 | INFO     | sum of square deviations: 20598762674.99742
[2026-03-25 11:59:56] 2026-03-25 10:58:36,087 | INFO     | sum of deviations: -4894349743.012356
[2026-03-25 11:59:56] 2026-03-25 10:58:36,087 | INFO     | mean x: 1774423962.002469
[2026-03-25 11:59:56] 2026-03-25 10:58:36,087 | INFO     | mean y: 2344590.012345679
[2026-03-25 11:59:56] 2026-03-25 10:58:36,087 | INFO     | intersect: 423954936.19896865
[2026-03-25 11:59:56] 2026-03-25 10:58:36,088 | INFO     | chi2: 0.8037272186519159
[2026-03-25 11:59:56] 2026-03-25 10:58:36,088 | INFO     | current chi2=0.8037272186519159 (change=0.8243383796694396 %)
[2026-03-25 11:59:56] 2026-03-25 10:58:36,088 | INFO     | left removable region: 20
[2026-03-25 11:59:56] 2026-03-25 10:58:36,089 | INFO     | sum of square deviations: 17557775485.997364
[2026-03-25 11:59:56] 2026-03-25 10:58:36,092 | INFO     | sum of deviations: 20378920969.049477
[2026-03-25 11:59:56] 2026-03-25 10:58:36,092 | INFO     | mean x: 1774423931.5026042
[2026-03-25 11:59:56] 2026-03-25 10:58:36,093 | INFO     | mean y: 2349481.4505208335
[2026-03-25 11:59:56] 2026-03-25 10:58:36,093 | INFO     | intersect: -2057185058.9313483
[2026-03-25 11:59:56] 2026-03-25 10:58:36,093 | INFO     | chi2: 0.002026662970863538
[2026-03-25 11:59:56] 2026-03-25 10:58:36,093 | INFO     | current memory leak: 1.16 B/s (using 384 data points, chi2=0.00)
[2026-03-25 11:59:56] 2026-03-25 10:58:36,094 | INFO     | could have reported an average CPU frequency of 2731 MHz (18 samples)
[2026-03-25 11:59:56] 2026-03-25 10:58:36,094 | INFO     | ..............................
[2026-03-25 11:59:56] 2026-03-25 10:58:36,094 | INFO     | . Timing measurements:
[2026-03-25 11:59:56] 2026-03-25 10:58:36,094 | INFO     | . get job = 0 s
[2026-03-25 11:59:56] 2026-03-25 10:58:36,094 | INFO     | . initial setup = 8 s
[2026-03-25 11:59:56] 2026-03-25 10:58:36,094 | INFO     | . payload setup = 15 s
[2026-03-25 11:59:56] 2026-03-25 10:58:36,094 | INFO     | . stage-in = 0 s
[2026-03-25 11:59:56] 2026-03-25 10:58:36,094 | INFO     | . payload execution = 25284 s
[2026-03-25 11:59:56] 2026-03-25 10:58:36,095 | INFO     | . stage-out = 1 s
[2026-03-25 11:59:56] 2026-03-25 10:58:36,095 | INFO     | . log creation = 0 s
[2026-03-25 11:59:56] 2026-03-25 10:58:36,095 | INFO     | ..............................
[2026-03-25 11:59:56] 2026-03-25 10:58:36,311 | INFO     | 
[2026-03-25 11:59:56] 2026-03-25 10:58:36,312 | INFO     | job summary report
[2026-03-25 11:59:56] 2026-03-25 10:58:36,312 | INFO     | --------------------------------------------------
[2026-03-25 11:59:56] 2026-03-25 10:58:36,312 | INFO     | PanDA job id: 7057544237
[2026-03-25 11:59:56] 2026-03-25 10:58:36,312 | INFO     | task id: 49176785
[2026-03-25 11:59:56] 2026-03-25 10:58:36,312 | INFO     | errors: (none)
[2026-03-25 11:59:56] 2026-03-25 10:58:36,312 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 11:59:56] 2026-03-25 10:58:36,313 | INFO     | pilot state: finished 
[2026-03-25 11:59:56] 2026-03-25 10:58:36,313 | INFO     | transexitcode: 0
[2026-03-25 11:59:56] 2026-03-25 10:58:36,313 | INFO     | exeerrorcode: 0
[2026-03-25 11:59:56] 2026-03-25 10:58:36,313 | INFO     | exeerrordiag: 
[2026-03-25 11:59:56] 2026-03-25 10:58:36,313 | INFO     | exitcode: 0
[2026-03-25 11:59:56] 2026-03-25 10:58:36,313 | INFO     | exitmsg: OK
[2026-03-25 11:59:56] 2026-03-25 10:58:36,313 | INFO     | cpuconsumptiontime: 95616 s
[2026-03-25 11:59:56] 2026-03-25 10:58:36,323 | INFO     | nevents: 400
[2026-03-25 11:59:56] 2026-03-25 10:58:36,323 | INFO     | neventsw: 0
[2026-03-25 11:59:56] 2026-03-25 10:58:36,323 | INFO     | pid: 3982804
[2026-03-25 11:59:56] 2026-03-25 10:58:36,323 | INFO     | pgrp: 3982804
[2026-03-25 11:59:56] 2026-03-25 10:58:36,324 | INFO     | corecount: 4
[2026-03-25 11:59:56] 2026-03-25 10:58:36,324 | INFO     | event service: False
[2026-03-25 11:59:56] 2026-03-25 10:58:36,324 | INFO     | sizes: {0: 2279877, 1: 2280338, 12: 2280338, 25303: 2317017, 25304: 2326039, 25307: 2326095, 25308: 2326417}
[2026-03-25 11:59:56] 2026-03-25 10:58:36,324 | INFO     | --------------------------------------------------
[2026-03-25 11:59:56] 2026-03-25 10:58:36,324 | INFO     | 
[2026-03-25 11:59:56] 2026-03-25 10:58:36,324 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot104/slots/0
[2026-03-25 11:59:56] 2026-03-25 10:58:36,360 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,360 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,360 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,360 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,360 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,360 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,361 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,361 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,361 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,361 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,361 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,361 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,361 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,361 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,361 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,361 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,361 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,362 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 11:59:56] 2026-03-25 10:58:36,362 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,362 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 11:59:56] 2026-03-25 10:58:36,362 | INFO     | job 7057544237 has completed (purged errors)
[2026-03-25 11:59:56] 2026-03-25 10:58:36,362 | INFO     | overall cleanup function is called
[2026-03-25 11:59:56] 2026-03-25 10:58:36,385 | WARNING  | process 3982804 can no longer be monitored (due to stat problems) - aborting
[2026-03-25 11:59:56] 2026-03-25 10:58:37,037 | INFO     | using path: /var/lib/boinc/var/slot104/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 11:59:56] 2026-03-25 10:58:37,038 | INFO     | using path: /var/lib/boinc/var/slot104/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 11:59:56] 2026-03-25 10:58:37,038 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-25 11:59:56] 2026-03-25 10:58:37,038 | WARNING  | maxPSS not found in memory monitor output
[2026-03-25 11:59:56] 2026-03-25 10:58:37,039 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot104/slots/0/PanDA_Pilot-7057544237/payload.stdout) since it has not been created yet
[2026-03-25 11:59:56] 2026-03-25 10:58:37,039 | INFO     | executing command: df -mP /var/lib/boinc/var/slot104/slots/0
[2026-03-25 11:59:56] 2026-03-25 10:58:37,069 | INFO     | sufficient remaining disk space (214729490432 B)
[2026-03-25 11:59:56] 2026-03-25 10:58:37,069 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-25 11:59:56] 2026-03-25 10:58:37,070 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot104/slots/0/PanDA_Pilot-7057544237/HITS.49176785._000196.pool.root.1 since it does not exist
[2026-03-25 11:59:56] 2026-03-25 10:58:37,375 | INFO     | --- collectZombieJob: --- 10, [3982804]
[2026-03-25 11:59:56] 2026-03-25 10:58:37,376 | INFO     | zombie collector waiting for pid 3982804
[2026-03-25 11:59:56] 2026-03-25 10:58:37,376 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 11:59:56] 2026-03-25 10:58:37,376 | INFO     | collected zombie processes
[2026-03-25 11:59:56] 2026-03-25 10:58:37,376 | INFO     | will attempt to kill all subprocesses of pid=3982804
[2026-03-25 11:59:56] 2026-03-25 10:58:38,559 | INFO     | number of running child processes to parent process 3982804: 1
[2026-03-25 11:59:56] 2026-03-25 10:58:38,560 | INFO     | maximum number of monitored processes: 6
[2026-03-25 11:59:56] 2026-03-25 10:58:38,560 | INFO     | aborting job monitoring since job object (job id=7057544237) has expired
[2026-03-25 11:59:56] 2026-03-25 10:58:38,963 | INFO     | process IDs to be killed: [3982804] (in reverse order)
[2026-03-25 11:59:56] 2026-03-25 10:58:39,546 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 11:59:56] 2026-03-25 10:58:39,546 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 11:59:56] 2026-03-25 10:58:39,588 | INFO     | did not find any defunct processes belonging to 3982804
[2026-03-25 11:59:56] 2026-03-25 10:58:39,626 | INFO     | did not find any defunct processes belonging to 3982804
[2026-03-25 11:59:56] 2026-03-25 10:58:39,626 | INFO     | ready for new job
[2026-03-25 11:59:56] 2026-03-25 10:58:39,627 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 11:59:56] 2026-03-25 10:58:39,631 | INFO     | **************************************
[2026-03-25 11:59:56] 2026-03-25 10:58:39,631 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 11:59:56] 2026-03-25 10:58:39,631 | INFO     | **************************************
[2026-03-25 11:59:56] 2026-03-25 10:58:39,631 | INFO     | 
[2026-03-25 11:59:56] 2026-03-25 10:58:39,639 | INFO     | architecture information:
[2026-03-25 11:59:56] 2026-03-25 10:58:39,643 | INFO     | executing command: cat /etc/os-release
[2026-03-25 11:59:56] 2026-03-25 10:58:39,672 | INFO     | cat /etc/os-release:
[2026-03-25 11:59:56] NAME="CentOS Linux"
[2026-03-25 11:59:56] VERSION="7 (Core)"
[2026-03-25 11:59:56] ID="centos"
[2026-03-25 11:59:56] ID_LIKE="rhel fedora"
[2026-03-25 11:59:56] VERSION_ID="7"
[2026-03-25 11:59:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 11:59:56] ANSI_COLOR="0;31"
[2026-03-25 11:59:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 11:59:56] HOME_URL="https://www.centos.org/"
[2026-03-25 11:59:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 11:59:56] 
[2026-03-25 11:59:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 11:59:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 11:59:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 11:59:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 11:59:56] 
[2026-03-25 11:59:56] 2026-03-25 10:58:39,672 | INFO     | **************************************
[2026-03-25 11:59:56] 2026-03-25 10:58:40,174 | INFO     | executing command: df -mP /var/lib/boinc/var/slot104/slots/0
[2026-03-25 11:59:56] 2026-03-25 10:58:40,209 | INFO     | sufficient remaining disk space (214732636160 B)
[2026-03-25 11:59:56] 2026-03-25 10:58:40,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 11:59:56] 2026-03-25 10:58:40,209 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 11:59:56] 2026-03-25 10:58:40,209 | INFO     | update_server=False
[2026-03-25 11:59:56] 2026-03-25 10:58:40,209 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 11:59:56] 2026-03-25 10:58:40,210 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 11:59:56] 2026-03-25 10:58:40,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 11:59:56] 2026-03-25 10:58:40,210 | INFO     | aborting loop
[2026-03-25 11:59:56] 2026-03-25 10:58:40,589 | INFO     | all payload control threads have been joined
[2026-03-25 11:59:56] 2026-03-25 10:58:40,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 11:59:56] 2026-03-25 10:58:40,790 | INFO     | all data control threads have been joined
[2026-03-25 11:59:56] 2026-03-25 10:58:41,214 | INFO     | [job] retrieve thread has finished
[2026-03-25 11:59:56] 2026-03-25 10:58:41,215 | INFO     | [job] job monitor thread has finished
[2026-03-25 11:59:56] 2026-03-25 10:58:41,237 | INFO     | [job] validate thread has finished
[2026-03-25 11:59:56] 2026-03-25 10:58:41,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 11:59:56] 2026-03-25 10:58:41,329 | INFO     | [payload] validate_post thread has finished
[2026-03-25 11:59:56] 2026-03-25 10:58:41,437 | INFO     | [data] copytool_in thread has finished
[2026-03-25 11:59:56] 2026-03-25 10:58:41,594 | INFO     | [payload] control thread has finished
[2026-03-25 11:59:56] 2026-03-25 10:58:41,795 | INFO     | [data] control thread has finished
[2026-03-25 11:59:56] 2026-03-25 10:58:41,870 | INFO     | all job control threads have been joined
[2026-03-25 11:59:56] 2026-03-25 10:58:42,157 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 11:59:56] 2026-03-25 10:58:42,215 | INFO     | [data] copytool_out thread has finished
[2026-03-25 11:59:56] 2026-03-25 10:58:42,252 | INFO     | [job] queue monitor thread has finished
[2026-03-25 11:59:56] 2026-03-25 10:58:42,280 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 11:59:56] 2026-03-25 10:58:42,326 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 11:59:56] 2026-03-25 10:58:42,426 | INFO     | [payload] failed_post thread has finished
[2026-03-25 11:59:56] 2026-03-25 10:58:42,875 | INFO     | [job] control thread has finished
[2026-03-25 11:59:56] 2026-03-25 10:58:44,788 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 11:59:56] 2026-03-25 10:58:50,320 | INFO     | job.realtimelogging is not enabled
[2026-03-25 11:59:56] 2026-03-25 10:58:51,325 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 11:59:56] 2026-03-25 10:59:08,691 | INFO     | PID=3977127 has CPU usage=15.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-25 11:59:56] 2026-03-25 10:59:08,691 | INFO     | .. there are 23 such processes running
[2026-03-25 11:59:56] 2026-03-25 10:59:08,692 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 11:59:56] 2026-03-25 10:59:08,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 11:59:56] 2026-03-25 10:59:08,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 11:59:56] 2026-03-25 10:59:18,140 | INFO     | [monitor] cgroup control has ended
[2026-03-25 11:59:56] 2026-03-25 10:59:18,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22667274155840)>', '<ExcThread(monitor, started 22667030955776)>']
[2026-03-25 11:59:56] 2026-03-25 10:59:18,742 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 11:59:56] 2026-03-25 10:59:18,743 | INFO     | [monitor] control thread has ended
[2026-03-25 11:59:56] 2026-03-25 10:59:23,540 | INFO     | all workflow threads have been joined
[2026-03-25 11:59:56] 2026-03-25 10:59:23,541 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 11:59:56] 2026-03-25 10:59:23,541 | INFO     | traces error code: 0
[2026-03-25 11:59:56] 2026-03-25 10:59:23,541 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 11:59:56] 2026-03-25 10:59:23,689 [wrapper] ==== pilot stdout END ====
[2026-03-25 11:59:56] 2026-03-25 10:59:23,693 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 11:59:56] 2026-03-25 10:59:23,696 [wrapper] pilotpid: 3977127
[2026-03-25 11:59:56] 2026-03-25 10:59:23,700 [wrapper] Pilot exit status: 0
[2026-03-25 11:59:56] 2026-03-25 10:59:23,754 [wrapper] pandaids: 7057544237
[2026-03-25 11:59:56] 2026-03-25 10:59:23,992 [wrapper] cleanup supervisor_pilot  501664 3977128
[2026-03-25 11:59:56] 2026-03-25 10:59:23,996 [wrapper] Test setup, not cleaning
[2026-03-25 11:59:56] 2026-03-25 10:59:24,001 [wrapper] apfmon messages muted
[2026-03-25 11:59:56] 2026-03-25 10:59:24,005 [wrapper] ==== wrapper stdout END ====
[2026-03-25 11:59:56] 2026-03-25 10:59:24,017 [wrapper] ==== wrapper stderr END ====
[2026-03-25 11:59:56]  *** Error codes and diagnostics ***
[2026-03-25 11:59:56]     "exeErrorCode": 0,
[2026-03-25 11:59:56]     "exeErrorDiag": "",
[2026-03-25 11:59:56]     "pilotErrorCode": 0,
[2026-03-25 11:59:56]     "pilotErrorDiag": "",
[2026-03-25 11:59:56]  *** Listing of results directory ***
[2026-03-25 11:59:56] total 483520
[2026-03-25 11:59:56] -rw-r--r--. 1 boinc boinc      5111 Mar 17 22:36 queuedata.json
[2026-03-25 11:59:56] -rw-r--r--. 1 boinc boinc    585013 Mar 17 22:36 pilot3.tar.gz
[2026-03-25 11:59:56] -rwx------. 1 boinc boinc     36322 Mar 17 22:37 runpilot2-wrapper.sh
[2026-03-25 11:59:56] -rw-r--r--. 1 boinc boinc       100 Mar 25 03:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 11:59:56] -rwxr-xr-x. 1 boinc boinc      7986 Mar 25 03:53 run_atlas
[2026-03-25 11:59:56] -rw-r--r--. 1 boinc boinc       105 Mar 25 03:53 job.xml
[2026-03-25 11:59:56] -rw-r--r--. 2 boinc boinc 242892348 Mar 25 04:56 EVNT.49135220._000008.pool.root.1
[2026-03-25 11:59:56] -rw-r--r--. 1 boinc boinc      6623 Mar 25 04:56 init_data.xml
[2026-03-25 11:59:56] drwxrwx--x. 2 boinc boinc      4096 Mar 25 04:56 shared
[2026-03-25 11:59:56] -rw-r--r--. 2 boinc boinc    597533 Mar 25 04:56 input.tar.gz
[2026-03-25 11:59:56] -rw-r--r--. 2 boinc boinc     15845 Mar 25 04:56 start_atlas.sh
[2026-03-25 11:59:56] -rw-r--r--. 1 boinc boinc         0 Mar 25 04:56 boinc_lockfile
[2026-03-25 11:59:56] -rw-r--r--. 1 boinc boinc      2609 Mar 25 04:56 pandaJob.out
[2026-03-25 11:59:56] -rw-------. 1 boinc boinc   1010836 Mar 25 04:56 agis_schedconf.cvmfs.json
[2026-03-25 11:59:56] -rw-------. 1 boinc boinc       443 Mar 25 04:56 workernode_map.json
[2026-03-25 11:59:56] drwx------. 5 boinc boinc      4096 Mar 25 04:56 pilot3
[2026-03-25 11:59:56] -rw-------. 1 boinc boinc 240297930 Mar 25 11:57 HITS.49176785._000196.pool.root.1
[2026-03-25 11:59:56] -rw-r--r--. 1 boinc boinc       529 Mar 25 11:58 boinc_task_state.xml
[2026-03-25 11:59:56] -rw-------. 1 boinc boinc      1029 Mar 25 11:58 memory_monitor_summary.json
[2026-03-25 11:59:56] -rw-------. 1 boinc boinc   1511579 Mar 25 11:58 agis_ddmendpoints.agis.ALL.json
[2026-03-25 11:59:56] -rw-------. 1 boinc boinc    563547 Mar 25 11:58 log.49176785._000196.job.log.tgz.1
[2026-03-25 11:59:56] -rw-------. 1 boinc boinc      6347 Mar 25 11:58 heartbeat.json
[2026-03-25 11:59:56] -rw-------. 1 boinc boinc        95 Mar 25 11:59 pilot_heartbeat.json
[2026-03-25 11:59:56] -rw-------. 1 boinc boinc      4904 Mar 25 11:59 pilotlog.txt
[2026-03-25 11:59:56] -rw-------. 1 boinc boinc   3432868 Mar 25 11:59 log.49176785._000196.job.log.1
[2026-03-25 11:59:56] -rw-------. 1 boinc boinc       357 Mar 25 11:59 output.list
[2026-03-25 11:59:56] -rw-r--r--. 1 boinc boinc       620 Mar 25 11:59 runtime_log
[2026-03-25 11:59:56] -rw-------. 1 boinc boinc   4014080 Mar 25 11:59 result.tar.gz
[2026-03-25 11:59:56] -rw-------. 1 boinc boinc       667 Mar 25 11:59 x4PKDmDHrM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvy0LDmgz5UPn.diag
[2026-03-25 11:59:56] -rw-r--r--. 1 boinc boinc      9222 Mar 25 11:59 runtime_log.err
[2026-03-25 11:59:56] -rw-r--r--. 1 boinc boinc        27 Mar 25 11:59 wrapper_checkpoint.txt
[2026-03-25 11:59:56] -rw-r--r--. 1 boinc boinc      8192 Mar 25 11:59 boinc_mmap_file
[2026-03-25 11:59:56] -rw-r--r--. 1 boinc boinc     21358 Mar 25 11:59 stderr.txt
[2026-03-25 11:59:56] HITS file was successfully produced:
[2026-03-25 11:59:56] -rw-------. 1 boinc boinc 240297930 Mar 25 11:57 shared/HITS.pool.root.1
[2026-03-25 11:59:56]  *** Contents of shared directory: ***
[2026-03-25 11:59:56] total 476396
[2026-03-25 11:59:56] -rw-r--r--. 2 boinc boinc 242892348 Mar 25 04:56 ATLAS.root_0
[2026-03-25 11:59:56] -rw-r--r--. 2 boinc boinc    597533 Mar 25 04:56 input.tar.gz
[2026-03-25 11:59:56] -rw-r--r--. 2 boinc boinc     15845 Mar 25 04:56 start_atlas.sh
[2026-03-25 11:59:56] -rw-------. 1 boinc boinc 240297930 Mar 25 11:57 HITS.pool.root.1
[2026-03-25 11:59:56] -rw-------. 1 boinc boinc   4014080 Mar 25 11:59 result.tar.gz
11:59:58 (3972606): run_atlas exited; CPU time 97400.634056
11:59:58 (3972606): called boinc_finish(0)

</stderr_txt>
]]>

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