Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:06:41 (380852): wrapper (7.7.26015): starting
11:06:41 (380852): wrapper: running run_atlas (--nthreads 12)
[2026-03-20 11:06:41] Arguments: --nthreads 12
[2026-03-20 11:06:41] Threads: 12
[2026-03-20 11:06:41] Checking for CVMFS
[2026-03-20 11:06:41] No cvmfs_config command found, will try listing directly
[2026-03-20 11:06:41] CVMFS is ok
[2026-03-20 11:06:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 11:06:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-20 11:06:41] Further information can be found at the LHC@home message board.
[2026-03-20 11:06:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 11:06:41] Checking for apptainer binary...
[2026-03-20 11:06:41] which: no apptainer in ((null))
[2026-03-20 11:06:41] apptainer is not installed, using version from CVMFS
[2026-03-20 11:06:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 11:06:41] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-20 11:06:41] apptainer works
[2026-03-20 11:06:41] Set ATHENA_PROC_NUMBER=12
[2026-03-20 11:06:41] Set ATHENA_CORE_NUMBER=12
[2026-03-20 11:06:41] Starting ATLAS job with PandaID=7058019297
[2026-03-20 11:06:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 11:49:40]  *** The last 200 lines of the pilot log: ***
[2026-03-20 11:49:40]  protocol_id=None
[2026-03-20 11:49:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-20 11:49:40]  replicas=None
[2026-03-20 11:49:40]  scope=mc23_13p6TeV
[2026-03-20 11:49:40]  status=None
[2026-03-20 11:49:40]  status_code=0
[2026-03-20 11:49:40]  storage_token=
[2026-03-20 11:49:40]  surl=/var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7058019297/log.49190722._000002.job.log.tgz.1
[2026-03-20 11:49:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/13/log.49190722._000002.job.log.tgz.1
[2026-03-20 11:49:40]  workdir=None
[2026-03-20 11:49:40] ]
[2026-03-20 11:49:40] 2026-03-20 10:48:40,989 | INFO     | transferring file log.49190722._000002.job.log.tgz.1 from /var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7058019297/log.49190722._000002.job.log.tgz.1 to /var/lib/
[2026-03-20 11:49:40] 2026-03-20 10:48:40,989 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7058019297/log.49190722._000002.job.log.tgz.1 /var/lib/boinc/var/slot216/slots/2/
[2026-03-20 11:49:40] 2026-03-20 10:48:41,003 | INFO     | adding to output.list: log.49190722._000002.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/13/log.49190722._000002.job.log.tg
[2026-03-20 11:49:40] 2026-03-20 10:48:41,004 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-20 11:49:40] 2026-03-20 10:48:41,004 | INFO     | summary of transferred files:
[2026-03-20 11:49:40] 2026-03-20 10:48:41,004 | INFO     |  -- lfn=log.49190722._000002.job.log.tgz.1, status_code=0, status=transferred
[2026-03-20 11:49:40] 2026-03-20 10:48:41,004 | INFO     | stage-out finished correctly
[2026-03-20 11:49:40] 2026-03-20 10:48:41,624 | INFO     | time since job start (2512s) is within the limit (345600.0s)
[2026-03-20 11:49:40] 2026-03-20 10:48:42,949 | WARNING  | process 391383 can no longer be monitored (due to stat problems) - aborting
[2026-03-20 11:49:40] 2026-03-20 10:48:42,949 | INFO     | using path: /var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7058019297/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 11:49:40] 2026-03-20 10:48:43,295 | INFO     | number of running child processes to parent process 391383: 1
[2026-03-20 11:49:40] 2026-03-20 10:48:43,296 | INFO     | maximum number of monitored processes: 6
[2026-03-20 11:49:40] 2026-03-20 10:48:43,630 | INFO     | time since job start (2514s) is within the limit (345600.0s)
[2026-03-20 11:49:40] 2026-03-20 10:48:43,976 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-20 11:49:40] 2026-03-20 10:48:45,636 | INFO     | time since job start (2516s) is within the limit (345600.0s)
[2026-03-20 11:49:40] 2026-03-20 10:48:45,799 | INFO     | monitor loop #189: job 0:7058019297 is in state 'finished'
[2026-03-20 11:49:40] 2026-03-20 10:48:45,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-20 11:49:40] 2026-03-20 10:48:46,924 | INFO     | job 7058019297 has state=finished
[2026-03-20 11:49:40] 2026-03-20 10:48:46,925 | INFO     | preparing for final server update for job 7058019297 in state='finished'
[2026-03-20 11:49:40] 2026-03-20 10:48:46,925 | INFO     | reading metadata from: /var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7058019297/jobReport.json
[2026-03-20 11:49:40] 2026-03-20 10:48:46,926 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot216/slots/2/workernode_map.json
[2026-03-20 11:49:40] 2026-03-20 10:48:46,926 | INFO     | this job has now completed (state=finished)
[2026-03-20 11:49:40] 2026-03-20 10:48:46,926 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-20 11:49:40] 2026-03-20 10:48:46,927 | INFO     | log transfer has been attempted: DONE
[2026-03-20 11:49:40] 2026-03-20 10:48:46,927 | INFO     | job 7058019297 has finished - writing final server update
[2026-03-20 11:49:40] 2026-03-20 10:48:46,927 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3281177/.job.ad'
[2026-03-20 11:49:40] 2026-03-20 10:48:46,927 | INFO     | total number of processed events: 400 (read)
[2026-03-20 11:49:40] 2026-03-20 10:48:46,944 | INFO     | using path: /var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7058019297/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 11:49:40] 2026-03-20 10:48:46,944 | INFO     | extracted standard info from prmon json
[2026-03-20 11:49:40] 2026-03-20 10:48:46,944 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 11:49:40] 2026-03-20 10:48:46,944 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 11:49:40] 2026-03-20 10:48:46,944 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 11:49:40] 2026-03-20 10:48:46,944 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 11:49:40] 2026-03-20 10:48:46,945 | INFO     | fitting pss+swap vs Time
[2026-03-20 11:49:40] 2026-03-20 10:48:46,945 | INFO     | sum of square deviations: 12176972.5
[2026-03-20 11:49:40] 2026-03-20 10:48:46,945 | INFO     | sum of deviations: -328121928.00000006
[2026-03-20 11:49:40] 2026-03-20 10:48:46,945 | INFO     | mean x: 1774002539.5
[2026-03-20 11:49:40] 2026-03-20 10:48:46,945 | INFO     | mean y: 2746674.588235294
[2026-03-20 11:49:40] 2026-03-20 10:48:46,945 | INFO     | intersect: 47805197861.66583
[2026-03-20 11:49:40] 2026-03-20 10:48:46,945 | INFO     | chi2: 0.004544077345472744
[2026-03-20 11:49:40] 2026-03-20 10:48:46,946 | INFO     | current memory leak: -26.95 B/s (using 34 data points, chi2=0.00)
[2026-03-20 11:49:40] 2026-03-20 10:48:46,946 | INFO     | could have reported an average CPU frequency of 3595 MHz (5 samples)
[2026-03-20 11:49:40] 2026-03-20 10:48:46,946 | INFO     | ..............................
[2026-03-20 11:49:40] 2026-03-20 10:48:46,946 | INFO     | . Timing measurements:
[2026-03-20 11:49:40] 2026-03-20 10:48:46,946 | INFO     | . get job = 0 s
[2026-03-20 11:49:40] 2026-03-20 10:48:46,946 | INFO     | . initial setup = 3 s
[2026-03-20 11:49:40] 2026-03-20 10:48:46,946 | INFO     | . payload setup = 5 s
[2026-03-20 11:49:40] 2026-03-20 10:48:46,946 | INFO     | . stage-in = 0 s
[2026-03-20 11:49:40] 2026-03-20 10:48:46,946 | INFO     | . payload execution = 2492 s
[2026-03-20 11:49:40] 2026-03-20 10:48:46,946 | INFO     | . stage-out = 0 s
[2026-03-20 11:49:40] 2026-03-20 10:48:46,946 | INFO     | . log creation = 0 s
[2026-03-20 11:49:40] 2026-03-20 10:48:46,946 | INFO     | ..............................
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | 
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | job summary report
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | --------------------------------------------------
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | PanDA job id: 7058019297
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | task id: 49190722
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | errors: (none)
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | pilot state: finished 
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | transexitcode: 0
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | exeerrorcode: 0
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | exeerrordiag: 
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | exitcode: 0
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | exitmsg: OK
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | cpuconsumptiontime: 27185 s
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | nevents: 400
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | neventsw: 0
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | pid: 391383
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | pgrp: 391383
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | corecount: 12
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | event service: False
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | sizes: {0: 2280287, 11: 2280287, 2500: 2305487, 2501: 2314509, 2504: 2314565, 2507: 2314791}
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | --------------------------------------------------
[2026-03-20 11:49:40] 2026-03-20 10:48:46,992 | INFO     | 
[2026-03-20 11:49:40] 2026-03-20 10:48:46,993 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/2
[2026-03-20 11:49:40] 2026-03-20 10:48:47,012 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,012 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,012 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,012 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,012 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,012 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,013 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,013 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,013 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,013 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,013 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,013 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,013 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 11:49:40] 2026-03-20 10:48:47,013 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,013 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 11:49:40] 2026-03-20 10:48:47,013 | INFO     | job 7058019297 has completed (purged errors)
[2026-03-20 11:49:40] 2026-03-20 10:48:47,013 | INFO     | overall cleanup function is called
[2026-03-20 11:49:40] 2026-03-20 10:48:48,020 | INFO     | --- collectZombieJob: --- 10, [391383]
[2026-03-20 11:49:40] 2026-03-20 10:48:48,020 | INFO     | zombie collector waiting for pid 391383
[2026-03-20 11:49:40] 2026-03-20 10:48:48,020 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 11:49:40] 2026-03-20 10:48:48,020 | INFO     | collected zombie processes
[2026-03-20 11:49:40] 2026-03-20 10:48:48,020 | INFO     | will attempt to kill all subprocesses of pid=391383
[2026-03-20 11:49:40] 2026-03-20 10:48:48,368 | INFO     | process IDs to be killed: [391383] (in reverse order)
[2026-03-20 11:49:40] 2026-03-20 10:48:48,507 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 11:49:40] 2026-03-20 10:48:48,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 11:49:40] 2026-03-20 10:48:48,530 | INFO     | did not find any defunct processes belonging to 391383
[2026-03-20 11:49:40] 2026-03-20 10:48:48,552 | INFO     | did not find any defunct processes belonging to 391383
[2026-03-20 11:49:40] 2026-03-20 10:48:48,552 | INFO     | ready for new job
[2026-03-20 11:49:40] 2026-03-20 10:48:48,552 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 11:49:40] 2026-03-20 10:48:48,553 | INFO     | **************************************
[2026-03-20 11:49:40] 2026-03-20 10:48:48,553 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 11:49:40] 2026-03-20 10:48:48,553 | INFO     | **************************************
[2026-03-20 11:49:40] 2026-03-20 10:48:48,553 | INFO     | 
[2026-03-20 11:49:40] 2026-03-20 10:48:48,559 | INFO     | architecture information:
[2026-03-20 11:49:40] 2026-03-20 10:48:48,559 | INFO     | executing command: cat /etc/os-release
[2026-03-20 11:49:40] 2026-03-20 10:48:48,570 | INFO     | cat /etc/os-release:
[2026-03-20 11:49:40] NAME="CentOS Linux"
[2026-03-20 11:49:40] VERSION="7 (Core)"
[2026-03-20 11:49:40] ID="centos"
[2026-03-20 11:49:40] ID_LIKE="rhel fedora"
[2026-03-20 11:49:40] VERSION_ID="7"
[2026-03-20 11:49:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 11:49:40] ANSI_COLOR="0;31"
[2026-03-20 11:49:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 11:49:40] HOME_URL="https://www.centos.org/"
[2026-03-20 11:49:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 11:49:40] 
[2026-03-20 11:49:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 11:49:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 11:49:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 11:49:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 11:49:40] 
[2026-03-20 11:49:40] 2026-03-20 10:48:48,570 | INFO     | **************************************
[2026-03-20 11:49:40] 2026-03-20 10:48:49,073 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/2
[2026-03-20 11:49:40] 2026-03-20 10:48:49,092 | INFO     | sufficient remaining disk space (201701982208 B)
[2026-03-20 11:49:40] 2026-03-20 10:48:49,093 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 11:49:40] 2026-03-20 10:48:49,093 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 11:49:40] 2026-03-20 10:48:49,093 | INFO     | update_server=False
[2026-03-20 11:49:40] 2026-03-20 10:48:49,093 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 11:49:40] 2026-03-20 10:48:49,093 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 11:49:40] 2026-03-20 10:48:49,305 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 11:49:40] 2026-03-20 10:48:49,306 | INFO     | aborting loop
[2026-03-20 11:49:40] 2026-03-20 10:48:49,388 | INFO     | all data control threads have been joined
[2026-03-20 11:49:40] 2026-03-20 10:48:49,793 | INFO     | all payload control threads have been joined
[2026-03-20 11:49:40] 2026-03-20 10:48:50,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 11:49:40] 2026-03-20 10:48:50,098 | INFO     | [job] retrieve thread has finished
[2026-03-20 11:49:40] 2026-03-20 10:48:50,254 | INFO     | [job] validate thread has finished
[2026-03-20 11:49:40] 2026-03-20 10:48:50,296 | INFO     | all job control threads have been joined
[2026-03-20 11:49:40] 2026-03-20 10:48:50,311 | INFO     | [job] job monitor thread has finished
[2026-03-20 11:49:40] 2026-03-20 10:48:50,383 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 11:49:40] 2026-03-20 10:48:50,394 | INFO     | [data] control thread has finished
[2026-03-20 11:49:40] 2026-03-20 10:48:50,469 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 11:49:40] 2026-03-20 10:48:50,500 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 11:49:40] 2026-03-20 10:48:50,588 | INFO     | [data] copytool_in thread has finished
[2026-03-20 11:49:40] 2026-03-20 10:48:50,799 | INFO     | [payload] control thread has finished
[2026-03-20 11:49:40] 2026-03-20 10:48:51,099 | INFO     | [data] copytool_out thread has finished
[2026-03-20 11:49:40] 2026-03-20 10:48:51,142 | INFO     | [payload] validate_post thread has finished
[2026-03-20 11:49:40] 2026-03-20 10:48:51,302 | INFO     | [job] control thread has finished
[2026-03-20 11:49:40] 2026-03-20 10:48:51,555 | INFO     | [payload] failed_post thread has finished
[2026-03-20 11:49:40] 2026-03-20 10:48:51,898 | INFO     | [monitor] cgroup control has ended
[2026-03-20 11:49:40] 2026-03-20 10:48:52,002 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 11:49:40] 2026-03-20 10:48:53,008 | INFO     | [job] queue monitor thread has finished
[2026-03-20 11:49:40] 2026-03-20 10:48:54,034 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 11:49:40] 2026-03-20 10:48:59,368 | INFO     | job.realtimelogging is not enabled
[2026-03-20 11:49:40] 2026-03-20 10:49:00,374 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 11:49:40] 2026-03-20 10:49:01,403 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22734120712000)>', '<ExcThread(monitor, started 22733879781120)>']
[2026-03-20 11:49:40] 2026-03-20 10:49:06,429 | INFO     | all workflow threads have been joined
[2026-03-20 11:49:40] 2026-03-20 10:49:06,429 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 11:49:40] 2026-03-20 10:49:06,429 | INFO     | traces error code: 0
[2026-03-20 11:49:40] 2026-03-20 10:49:06,429 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 11:49:40] 2026-03-20 10:49:19,179 | INFO     | PID=385501 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-20 11:49:40] 2026-03-20 10:49:19,180 | INFO     | .. there are 8 such processes running
[2026-03-20 11:49:40] 2026-03-20 10:49:19,180 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 11:49:40] 2026-03-20 10:49:19,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 11:49:40] 2026-03-20 10:49:19,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 11:49:40] 2026-03-20 10:49:19,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 11:49:40] 2026-03-20 10:49:19,180 | CRITICAL | thread 'MainThread' is not alive
[2026-03-20 11:49:40] 2026-03-20 10:49:19,180 | INFO     | [monitor] control thread has ended
[2026-03-20 11:49:40] 2026-03-20 10:49:19,278 [wrapper] ==== pilot stdout END ====
[2026-03-20 11:49:40] 2026-03-20 10:49:19,280 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 11:49:40] 2026-03-20 10:49:19,282 [wrapper] pilotpid: 385501
[2026-03-20 11:49:40] 2026-03-20 10:49:19,283 [wrapper] Pilot exit status: 0
[2026-03-20 11:49:40] 2026-03-20 10:49:19,289 [wrapper] pandaids: 7058019297
[2026-03-20 11:49:40] 2026-03-20 10:49:19,392 [wrapper] cleanup supervisor_pilot  482476 385502
[2026-03-20 11:49:40] 2026-03-20 10:49:19,394 [wrapper] Test setup, not cleaning
[2026-03-20 11:49:40] 2026-03-20 10:49:19,395 [wrapper] apfmon messages muted
[2026-03-20 11:49:40] 2026-03-20 10:49:19,397 [wrapper] ==== wrapper stdout END ====
[2026-03-20 11:49:40] 2026-03-20 10:49:19,398 [wrapper] ==== wrapper stderr END ====
[2026-03-20 11:49:40]  *** Error codes and diagnostics ***
[2026-03-20 11:49:40]     "exeErrorCode": 0,
[2026-03-20 11:49:40]     "exeErrorDiag": "",
[2026-03-20 11:49:40]     "pilotErrorCode": 0,
[2026-03-20 11:49:40]     "pilotErrorDiag": "",
[2026-03-20 11:49:40]  *** Listing of results directory ***
[2026-03-20 11:49:40] total 481656
[2026-03-20 11:49:40] -rw-r--r--. 1 boinc boinc    585013 Mar 18 05:11 pilot3.tar.gz
[2026-03-20 11:49:40] -rwx------. 1 boinc boinc     36322 Mar 18 05:12 runpilot2-wrapper.sh
[2026-03-20 11:49:40] -rw-r--r--. 1 boinc boinc      5111 Mar 18 05:14 queuedata.json
[2026-03-20 11:49:40] -rw-r--r--. 1 boinc boinc       100 Mar 20 10:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 11:49:40] -rwxr-xr-x. 1 boinc boinc      7986 Mar 20 10:14 run_atlas
[2026-03-20 11:49:40] -rw-r--r--. 1 boinc boinc       105 Mar 20 10:14 job.xml
[2026-03-20 11:49:40] -rw-r--r--. 2 boinc boinc 256525389 Mar 20 11:06 EVNT.49124412._000001.pool.root.1
[2026-03-20 11:49:40] -rw-r--r--. 2 boinc boinc     15845 Mar 20 11:06 start_atlas.sh
[2026-03-20 11:49:40] drwxrwx--x. 2 boinc boinc      4096 Mar 20 11:06 shared
[2026-03-20 11:49:40] -rw-r--r--. 2 boinc boinc    597533 Mar 20 11:06 input.tar.gz
[2026-03-20 11:49:40] -rw-r--r--. 1 boinc boinc      6711 Mar 20 11:06 init_data.xml
[2026-03-20 11:49:40] -rw-r--r--. 1 boinc boinc         0 Mar 20 11:06 boinc_lockfile
[2026-03-20 11:49:40] -rw-r--r--. 1 boinc boinc      2599 Mar 20 11:06 pandaJob.out
[2026-03-20 11:49:40] -rw-------. 1 boinc boinc   1010749 Mar 20 11:06 agis_schedconf.cvmfs.json
[2026-03-20 11:49:40] -rw-------. 1 boinc boinc   1511579 Mar 20 11:06 agis_ddmendpoints.agis.ALL.json
[2026-03-20 11:49:40] -rw-------. 1 boinc boinc       445 Mar 20 11:06 workernode_map.json
[2026-03-20 11:49:40] drwx------. 5 boinc boinc      4096 Mar 20 11:06 pilot3
[2026-03-20 11:49:40] -rw-------. 1 boinc boinc 231269607 Mar 20 11:48 HITS.49190722._000002.pool.root.1
[2026-03-20 11:49:40] -rw-r--r--. 1 boinc boinc       528 Mar 20 11:48 boinc_task_state.xml
[2026-03-20 11:49:40] -rw-------. 1 boinc boinc      1030 Mar 20 11:48 memory_monitor_summary.json
[2026-03-20 11:49:40] -rw-------. 1 boinc boinc        95 Mar 20 11:48 pilot_heartbeat.json
[2026-03-20 11:49:40] -rw-------. 1 boinc boinc    343971 Mar 20 11:48 log.49190722._000002.job.log.tgz.1
[2026-03-20 11:49:40] -rw-------. 1 boinc boinc      6338 Mar 20 11:48 heartbeat.json
[2026-03-20 11:49:40] -rw-------. 1 boinc boinc       891 Mar 20 11:49 pilotlog.txt
[2026-03-20 11:49:40] -rw-------. 1 boinc boinc    397695 Mar 20 11:49 log.49190722._000002.job.log.1
[2026-03-20 11:49:40] -rw-------. 1 boinc boinc       357 Mar 20 11:49 output.list
[2026-03-20 11:49:40] -rw-r--r--. 1 boinc boinc       620 Mar 20 11:49 runtime_log
[2026-03-20 11:49:40] -rw-------. 1 boinc boinc    757760 Mar 20 11:49 result.tar.gz
[2026-03-20 11:49:40] -rw-r--r--. 1 boinc boinc      9223 Mar 20 11:49 runtime_log.err
[2026-03-20 11:49:40] -rw-------. 1 boinc boinc       663 Mar 20 11:49 9zRLDmLSxM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmMkyLDm9s4Obn.diag
[2026-03-20 11:49:40] -rw-r--r--. 1 boinc boinc        26 Mar 20 11:49 wrapper_checkpoint.txt
[2026-03-20 11:49:40] -rw-r--r--. 1 boinc boinc      8192 Mar 20 11:49 boinc_mmap_file
[2026-03-20 11:49:40] -rw-r--r--. 1 boinc boinc     21664 Mar 20 11:49 stderr.txt
[2026-03-20 11:49:40] HITS file was successfully produced:
[2026-03-20 11:49:40] -rw-------. 1 boinc boinc 231269607 Mar 20 11:48 shared/HITS.pool.root.1
[2026-03-20 11:49:40]  *** Contents of shared directory: ***
[2026-03-20 11:49:40] total 477716
[2026-03-20 11:49:40] -rw-r--r--. 2 boinc boinc 256525389 Mar 20 11:06 ATLAS.root_0
[2026-03-20 11:49:40] -rw-r--r--. 2 boinc boinc     15845 Mar 20 11:06 start_atlas.sh
[2026-03-20 11:49:40] -rw-r--r--. 2 boinc boinc    597533 Mar 20 11:06 input.tar.gz
[2026-03-20 11:49:40] -rw-------. 1 boinc boinc 231269607 Mar 20 11:48 HITS.pool.root.1
[2026-03-20 11:49:40] -rw-------. 1 boinc boinc    757760 Mar 20 11:49 result.tar.gz
11:49:41 (380852): run_atlas exited; CPU time 27266.609086
11:49:41 (380852): called boinc_finish(0)

</stderr_txt>
]]>

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