Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:43:39 (1742690): wrapper (7.7.26015): starting
08:43:39 (1742690): wrapper: running run_atlas (--nthreads 12)
[2026-03-20 08:43:39] Arguments: --nthreads 12
[2026-03-20 08:43:39] Threads: 12
[2026-03-20 08:43:39] Checking for CVMFS
[2026-03-20 08:43:39] No cvmfs_config command found, will try listing directly
[2026-03-20 08:43:39] CVMFS is ok
[2026-03-20 08:43:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 08:43:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-20 08:43:39] Further information can be found at the LHC@home message board.
[2026-03-20 08:43:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 08:43:39] Checking for apptainer binary...
[2026-03-20 08:43:39] which: no apptainer in ((null))
[2026-03-20 08:43:39] apptainer is not installed, using version from CVMFS
[2026-03-20 08:43:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 08:43:39] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot168/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-20 08:43:39] apptainer works
[2026-03-20 08:43:39] Set ATHENA_PROC_NUMBER=12
[2026-03-20 08:43:39] Set ATHENA_CORE_NUMBER=12
[2026-03-20 08:43:39] Starting ATLAS job with PandaID=7058443273
[2026-03-20 08:43:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot168/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 09:40:03]  *** The last 200 lines of the pilot log: ***
[2026-03-20 09:40:03]  is_altstaged=None
[2026-03-20 09:40:03]  is_tar=False
[2026-03-20 09:40:03]  lfn=log.49178595._000016.job.log.tgz.1
[2026-03-20 09:40:03]  mtime=0
[2026-03-20 09:40:03]  protocol_id=None
[2026-03-20 09:40:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-20 09:40:03]  replicas=None
[2026-03-20 09:40:03]  scope=mc23_13p6TeV
[2026-03-20 09:40:03]  status=None
[2026-03-20 09:40:03]  status_code=0
[2026-03-20 09:40:03]  storage_token=
[2026-03-20 09:40:03]  surl=/var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7058443273/log.49178595._000016.job.log.tgz.1
[2026-03-20 09:40:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/61/log.49178595._000016.job.log.tgz.1
[2026-03-20 09:40:03]  workdir=None
[2026-03-20 09:40:03] ]
[2026-03-20 09:40:03] 2026-03-20 08:38:04,497 | INFO     | transferring file log.49178595._000016.job.log.tgz.1 from /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7058443273/log.49178595._000016.job.log.tgz.1 to /var/lib/
[2026-03-20 09:40:03] 2026-03-20 08:38:04,497 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7058443273/log.49178595._000016.job.log.tgz.1 /var/lib/boinc/var/slot168/slots/1/
[2026-03-20 09:40:03] 2026-03-20 08:38:04,514 | INFO     | adding to output.list: log.49178595._000016.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/61/log.49178595._000016.job.log.tg
[2026-03-20 09:40:03] 2026-03-20 08:38:04,515 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-20 09:40:03] 2026-03-20 08:38:04,515 | INFO     | summary of transferred files:
[2026-03-20 09:40:03] 2026-03-20 08:38:04,515 | INFO     |  -- lfn=log.49178595._000016.job.log.tgz.1, status_code=0, status=transferred
[2026-03-20 09:40:03] 2026-03-20 08:38:04,515 | INFO     | stage-out finished correctly
[2026-03-20 09:40:03] 2026-03-20 08:38:04,609 | INFO     | time since job start (3258s) is within the limit (345600.0s)
[2026-03-20 09:40:03] 2026-03-20 08:38:04,669 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-20 09:40:03] 2026-03-20 08:38:05,336 | INFO     | job 7058443273 has state=finished
[2026-03-20 09:40:03] 2026-03-20 08:38:05,336 | INFO     | preparing for final server update for job 7058443273 in state='finished'
[2026-03-20 09:40:03] 2026-03-20 08:38:05,336 | INFO     | reading metadata from: /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7058443273/jobReport.json
[2026-03-20 09:40:03] 2026-03-20 08:38:05,338 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot168/slots/1/workernode_map.json
[2026-03-20 09:40:03] 2026-03-20 08:38:05,338 | INFO     | this job has now completed (state=finished)
[2026-03-20 09:40:03] 2026-03-20 08:38:05,338 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-20 09:40:03] 2026-03-20 08:38:05,338 | INFO     | log transfer has been attempted: DONE
[2026-03-20 09:40:03] 2026-03-20 08:38:05,338 | INFO     | job 7058443273 has finished - writing final server update
[2026-03-20 09:40:03] 2026-03-20 08:38:05,338 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1268669/.job.ad'
[2026-03-20 09:40:03] 2026-03-20 08:38:05,338 | INFO     | total number of processed events: 400 (read)
[2026-03-20 09:40:03] 2026-03-20 08:38:05,355 | INFO     | using path: /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7058443273/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 09:40:03] 2026-03-20 08:38:05,356 | INFO     | extracted standard info from prmon json
[2026-03-20 09:40:03] 2026-03-20 08:38:05,356 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 09:40:03] 2026-03-20 08:38:05,356 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 09:40:03] 2026-03-20 08:38:05,356 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 09:40:03] 2026-03-20 08:38:05,356 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 09:40:03] 2026-03-20 08:38:05,357 | INFO     | fitting pss+swap vs Time
[2026-03-20 09:40:03] 2026-03-20 08:38:05,357 | INFO     | sum of square deviations: 32179208.0
[2026-03-20 09:40:03] 2026-03-20 08:38:05,357 | INFO     | sum of deviations: -844248845.0
[2026-03-20 09:40:03] 2026-03-20 08:38:05,357 | INFO     | mean x: 1773994353.0
[2026-03-20 09:40:03] 2026-03-20 08:38:05,357 | INFO     | mean y: 2744605.3829787234
[2026-03-20 09:40:03] 2026-03-20 08:38:05,358 | INFO     | intersect: 46544992741.40833
[2026-03-20 09:40:03] 2026-03-20 08:38:05,358 | INFO     | chi2: 0.001375568166057697
[2026-03-20 09:40:03] 2026-03-20 08:38:05,358 | INFO     | current memory leak: -26.24 B/s (using 47 data points, chi2=0.00)
[2026-03-20 09:40:03] 2026-03-20 08:38:05,358 | INFO     | could have reported an average CPU frequency of 3696 MHz (5 samples)
[2026-03-20 09:40:03] 2026-03-20 08:38:05,358 | INFO     | ..............................
[2026-03-20 09:40:03] 2026-03-20 08:38:05,358 | INFO     | . Timing measurements:
[2026-03-20 09:40:03] 2026-03-20 08:38:05,358 | INFO     | . get job = 0 s
[2026-03-20 09:40:03] 2026-03-20 08:38:05,358 | INFO     | . initial setup = 3 s
[2026-03-20 09:40:03] 2026-03-20 08:38:05,358 | INFO     | . payload setup = 4 s
[2026-03-20 09:40:03] 2026-03-20 08:38:05,358 | INFO     | . stage-in = 0 s
[2026-03-20 09:40:03] 2026-03-20 08:38:05,358 | INFO     | . payload execution = 3237 s
[2026-03-20 09:40:03] 2026-03-20 08:38:05,358 | INFO     | . stage-out = 0 s
[2026-03-20 09:40:03] 2026-03-20 08:38:05,358 | INFO     | . log creation = 0 s
[2026-03-20 09:40:03] 2026-03-20 08:38:05,358 | INFO     | ..............................
[2026-03-20 09:40:03] 2026-03-20 08:38:05,407 | INFO     | 
[2026-03-20 09:40:03] 2026-03-20 08:38:05,407 | INFO     | job summary report
[2026-03-20 09:40:03] 2026-03-20 08:38:05,407 | INFO     | --------------------------------------------------
[2026-03-20 09:40:03] 2026-03-20 08:38:05,407 | INFO     | PanDA job id: 7058443273
[2026-03-20 09:40:03] 2026-03-20 08:38:05,407 | INFO     | task id: 49178595
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | errors: (none)
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | pilot state: finished 
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | transexitcode: 0
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | exeerrorcode: 0
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | exeerrordiag: 
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | exitcode: 0
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | exitmsg: OK
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | cpuconsumptiontime: 36072 s
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | nevents: 400
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | neventsw: 0
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | pid: 1761866
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | pgrp: 1761866
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | corecount: 12
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | event service: False
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | sizes: {0: 2280351, 10: 2280351, 3246: 2305882, 3247: 2314960, 3248: 2315130}
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | --------------------------------------------------
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | 
[2026-03-20 09:40:03] 2026-03-20 08:38:05,408 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot168/slots/1
[2026-03-20 09:40:03] 2026-03-20 08:38:05,424 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | job 7058443273 has completed (purged errors)
[2026-03-20 09:40:03] 2026-03-20 08:38:05,425 | INFO     | overall cleanup function is called
[2026-03-20 09:40:03] 2026-03-20 08:38:06,432 | INFO     | --- collectZombieJob: --- 10, [1761866]
[2026-03-20 09:40:03] 2026-03-20 08:38:06,432 | INFO     | zombie collector waiting for pid 1761866
[2026-03-20 09:40:03] 2026-03-20 08:38:06,432 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 09:40:03] 2026-03-20 08:38:06,432 | INFO     | collected zombie processes
[2026-03-20 09:40:03] 2026-03-20 08:38:06,432 | INFO     | will attempt to kill all subprocesses of pid=1761866
[2026-03-20 09:40:03] 2026-03-20 08:38:07,424 | INFO     | process IDs to be killed: [1761866] (in reverse order)
[2026-03-20 09:40:03] 2026-03-20 08:38:07,551 | WARNING  | process 1761866 can no longer be monitored (due to stat problems) - aborting
[2026-03-20 09:40:03] 2026-03-20 08:38:07,577 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 09:40:03] 2026-03-20 08:38:07,578 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 09:40:03] 2026-03-20 08:38:07,660 | INFO     | did not find any defunct processes belonging to 1761866
[2026-03-20 09:40:03] 2026-03-20 08:38:07,737 | INFO     | did not find any defunct processes belonging to 1761866
[2026-03-20 09:40:03] 2026-03-20 08:38:07,737 | INFO     | ready for new job
[2026-03-20 09:40:03] 2026-03-20 08:38:07,737 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 09:40:03] 2026-03-20 08:38:07,738 | INFO     | **************************************
[2026-03-20 09:40:03] 2026-03-20 08:38:07,739 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 09:40:03] 2026-03-20 08:38:07,739 | INFO     | **************************************
[2026-03-20 09:40:03] 2026-03-20 08:38:07,739 | INFO     | 
[2026-03-20 09:40:03] 2026-03-20 08:38:07,748 | INFO     | architecture information:
[2026-03-20 09:40:03] 2026-03-20 08:38:07,749 | INFO     | executing command: cat /etc/os-release
[2026-03-20 09:40:03] 2026-03-20 08:38:07,762 | INFO     | cat /etc/os-release:
[2026-03-20 09:40:03] NAME="CentOS Linux"
[2026-03-20 09:40:03] VERSION="7 (Core)"
[2026-03-20 09:40:03] ID="centos"
[2026-03-20 09:40:03] ID_LIKE="rhel fedora"
[2026-03-20 09:40:03] VERSION_ID="7"
[2026-03-20 09:40:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 09:40:03] ANSI_COLOR="0;31"
[2026-03-20 09:40:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 09:40:03] HOME_URL="https://www.centos.org/"
[2026-03-20 09:40:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 09:40:03] 
[2026-03-20 09:40:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 09:40:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 09:40:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 09:40:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 09:40:03] 
[2026-03-20 09:40:03] 2026-03-20 08:38:07,762 | INFO     | **************************************
[2026-03-20 09:40:03] 2026-03-20 08:38:07,944 | INFO     | using path: /var/lib/boinc/var/slot168/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 09:40:03] 2026-03-20 08:38:08,264 | INFO     | executing command: df -mP /var/lib/boinc/var/slot168/slots/1
[2026-03-20 09:40:03] 2026-03-20 08:38:08,280 | INFO     | sufficient remaining disk space (235957911552 B)
[2026-03-20 09:40:03] 2026-03-20 08:38:08,280 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 09:40:03] 2026-03-20 08:38:08,280 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 09:40:03] 2026-03-20 08:38:08,280 | INFO     | update_server=False
[2026-03-20 09:40:03] 2026-03-20 08:38:08,280 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 09:40:03] 2026-03-20 08:38:08,281 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 09:40:03] 2026-03-20 08:38:08,281 | INFO     | all data control threads have been joined
[2026-03-20 09:40:03] 2026-03-20 08:38:08,303 | INFO     | number of running child processes to parent process 1761866: 1
[2026-03-20 09:40:03] 2026-03-20 08:38:08,303 | INFO     | maximum number of monitored processes: 6
[2026-03-20 09:40:03] 2026-03-20 08:38:08,303 | INFO     | aborting job monitoring since job object (job id=7058443273) has expired
[2026-03-20 09:40:03] 2026-03-20 08:38:08,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 09:40:03] 2026-03-20 08:38:08,304 | INFO     | will abort loop
[2026-03-20 09:40:03] 2026-03-20 08:38:08,604 | INFO     | all payload control threads have been joined
[2026-03-20 09:40:03] 2026-03-20 08:38:09,016 | INFO     | all job control threads have been joined
[2026-03-20 09:40:03] 2026-03-20 08:38:09,286 | INFO     | [data] control thread has finished
[2026-03-20 09:40:03] 2026-03-20 08:38:09,286 | INFO     | [job] retrieve thread has finished
[2026-03-20 09:40:03] 2026-03-20 08:38:09,309 | INFO     | [job] job monitor thread has finished
[2026-03-20 09:40:03] 2026-03-20 08:38:09,610 | INFO     | [payload] control thread has finished
[2026-03-20 09:40:03] 2026-03-20 08:38:09,859 | INFO     | [payload] failed_post thread has finished
[2026-03-20 09:40:03] 2026-03-20 08:38:09,905 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 09:40:03] 2026-03-20 08:38:10,018 | INFO     | [job] control thread has finished
[2026-03-20 09:40:03] 2026-03-20 08:38:10,201 | INFO     | [job] validate thread has finished
[2026-03-20 09:40:03] 2026-03-20 08:38:10,261 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 09:40:03] 2026-03-20 08:38:10,286 | INFO     | [data] copytool_out thread has finished
[2026-03-20 09:40:03] 2026-03-20 08:38:10,301 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 09:40:03] 2026-03-20 08:38:10,362 | INFO     | [payload] validate_post thread has finished
[2026-03-20 09:40:03] 2026-03-20 08:38:10,418 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 09:40:03] 2026-03-20 08:38:10,444 | INFO     | [data] copytool_in thread has finished
[2026-03-20 09:40:03] 2026-03-20 08:38:10,720 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 09:40:03] 2026-03-20 08:38:11,424 | INFO     | [job] queue monitor thread has finished
[2026-03-20 09:40:03] 2026-03-20 08:38:14,726 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 09:40:03] 2026-03-20 08:38:19,050 | INFO     | job.realtimelogging is not enabled
[2026-03-20 09:40:03] 2026-03-20 08:38:20,056 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 09:40:03] 2026-03-20 08:38:38,174 | INFO     | PID=1749435 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-20 09:40:03] 2026-03-20 08:38:38,174 | INFO     | .. there are 9 such processes running
[2026-03-20 09:40:03] 2026-03-20 08:38:38,174 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 09:40:03] 2026-03-20 08:38:38,174 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 09:40:03] 2026-03-20 08:38:38,174 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 09:40:03] 2026-03-20 08:38:51,505 | INFO     | [monitor] cgroup control has ended
[2026-03-20 09:40:03] 2026-03-20 08:38:52,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22996884555584)>', '<ExcThread(monitor, started 22996646639360)>']
[2026-03-20 09:40:03] 2026-03-20 08:38:53,247 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 09:40:03] 2026-03-20 08:38:53,247 | INFO     | [monitor] control thread has ended
[2026-03-20 09:40:03] 2026-03-20 08:38:57,919 | INFO     | all workflow threads have been joined
[2026-03-20 09:40:03] 2026-03-20 08:38:57,919 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 09:40:03] 2026-03-20 08:38:57,919 | INFO     | traces error code: 0
[2026-03-20 09:40:03] 2026-03-20 08:38:57,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 09:40:03] 2026-03-20 08:38:58,056 [wrapper] ==== pilot stdout END ====
[2026-03-20 09:40:03] 2026-03-20 08:38:58,059 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 09:40:03] 2026-03-20 08:38:58,061 [wrapper] pilotpid: 1749435
[2026-03-20 09:40:03] 2026-03-20 08:38:58,063 [wrapper] Pilot exit status: 0
[2026-03-20 09:40:03] 2026-03-20 08:38:58,070 [wrapper] pandaids: 7058443273
[2026-03-20 09:40:03] 2026-03-20 08:38:58,170 [wrapper] cleanup supervisor_pilot 1936567 1749437
[2026-03-20 09:40:03] 2026-03-20 08:38:58,173 [wrapper] Test setup, not cleaning
[2026-03-20 09:40:03] 2026-03-20 08:38:58,175 [wrapper] apfmon messages muted
[2026-03-20 09:40:03] 2026-03-20 08:38:58,177 [wrapper] ==== wrapper stdout END ====
[2026-03-20 09:40:03] 2026-03-20 08:38:58,179 [wrapper] ==== wrapper stderr END ====
[2026-03-20 09:40:03]  *** Error codes and diagnostics ***
[2026-03-20 09:40:03]     "exeErrorCode": 0,
[2026-03-20 09:40:03]     "exeErrorDiag": "",
[2026-03-20 09:40:03]     "pilotErrorCode": 0,
[2026-03-20 09:40:03]     "pilotErrorDiag": "",
[2026-03-20 09:40:03]  *** Listing of results directory ***
[2026-03-20 09:40:03] total 440160
[2026-03-20 09:40:03] -rw-r--r--. 1 boinc boinc      5111 Mar 18 05:11 queuedata.json
[2026-03-20 09:40:03] -rw-r--r--. 1 boinc boinc    585013 Mar 18 05:11 pilot3.tar.gz
[2026-03-20 09:40:03] -rwx------. 1 boinc boinc     36322 Mar 18 05:11 runpilot2-wrapper.sh
[2026-03-20 09:40:03] -rw-r--r--. 1 boinc boinc       100 Mar 20 07:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 09:40:03] -rwxr-xr-x. 1 boinc boinc      7986 Mar 20 07:59 run_atlas
[2026-03-20 09:40:03] -rw-r--r--. 1 boinc boinc       105 Mar 20 07:59 job.xml
[2026-03-20 09:40:03] -rw-r--r--. 1 boinc boinc      6711 Mar 20 08:43 init_data.xml
[2026-03-20 09:40:03] -rw-r--r--. 2 boinc boinc 229130135 Mar 20 08:43 EVNT.49129192._000001.pool.root.1
[2026-03-20 09:40:03] -rw-r--r--. 2 boinc boinc     15845 Mar 20 08:43 start_atlas.sh
[2026-03-20 09:40:03] drwxrwx--x. 2 boinc boinc      4096 Mar 20 08:43 shared
[2026-03-20 09:40:03] -rw-r--r--. 2 boinc boinc    597548 Mar 20 08:43 input.tar.gz
[2026-03-20 09:40:03] -rw-r--r--. 1 boinc boinc         0 Mar 20 08:43 boinc_lockfile
[2026-03-20 09:40:03] -rw-r--r--. 1 boinc boinc      2647 Mar 20 08:43 pandaJob.out
[2026-03-20 09:40:03] -rw-------. 1 boinc boinc   1010740 Mar 20 08:43 agis_schedconf.cvmfs.json
[2026-03-20 09:40:03] -rw-------. 1 boinc boinc   1511579 Mar 20 08:43 agis_ddmendpoints.agis.ALL.json
[2026-03-20 09:40:03] -rw-------. 1 boinc boinc       444 Mar 20 08:43 workernode_map.json
[2026-03-20 09:40:03] drwx------. 5 boinc boinc      4096 Mar 20 08:43 pilot3
[2026-03-20 09:40:03] -rw-------. 1 boinc boinc 215906926 Mar 20 09:37 HITS.49178595._000016.pool.root.1
[2026-03-20 09:40:03] -rw-r--r--. 1 boinc boinc       529 Mar 20 09:37 boinc_task_state.xml
[2026-03-20 09:40:03] -rw-------. 1 boinc boinc        95 Mar 20 09:37 pilot_heartbeat.json
[2026-03-20 09:40:03] -rw-------. 1 boinc boinc      1028 Mar 20 09:37 memory_monitor_summary.json
[2026-03-20 09:40:03] -rw-------. 1 boinc boinc    370433 Mar 20 09:38 log.49178595._000016.job.log.tgz.1
[2026-03-20 09:40:03] -rw-------. 1 boinc boinc      6348 Mar 20 09:38 heartbeat.json
[2026-03-20 09:40:03] -rw-------. 1 boinc boinc      5321 Mar 20 09:38 pilotlog.txt
[2026-03-20 09:40:03] -rw-------. 1 boinc boinc    499731 Mar 20 09:38 log.49178595._000016.job.log.1
[2026-03-20 09:40:03] -rw-------. 1 boinc boinc       357 Mar 20 09:38 output.list
[2026-03-20 09:40:03] -rw-r--r--. 1 boinc boinc       620 Mar 20 09:38 runtime_log
[2026-03-20 09:40:03] -rw-------. 1 boinc boinc    890880 Mar 20 09:38 result.tar.gz
[2026-03-20 09:40:03] -rw-r--r--. 1 boinc boinc      9223 Mar 20 09:38 runtime_log.err
[2026-03-20 09:40:03] -rw-------. 1 boinc boinc       662 Mar 20 09:38 M66NDmERxM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmObyLDmrpzSZm.diag
[2026-03-20 09:40:03] -rw-r--r--. 1 boinc boinc        27 Mar 20 09:39 wrapper_checkpoint.txt
[2026-03-20 09:40:03] -rw-r--r--. 1 boinc boinc      8192 Mar 20 09:40 boinc_mmap_file
[2026-03-20 09:40:03] -rw-r--r--. 1 boinc boinc     21349 Mar 20 09:40 stderr.txt
[2026-03-20 09:40:03] HITS file was successfully produced:
[2026-03-20 09:40:03] -rw-------. 1 boinc boinc 215906926 Mar 20 09:37 shared/HITS.pool.root.1
[2026-03-20 09:40:03]  *** Contents of shared directory: ***
[2026-03-20 09:40:03] total 436088
[2026-03-20 09:40:03] -rw-r--r--. 2 boinc boinc 229130135 Mar 20 08:43 ATLAS.root_0
[2026-03-20 09:40:03] -rw-r--r--. 2 boinc boinc     15845 Mar 20 08:43 start_atlas.sh
[2026-03-20 09:40:03] -rw-r--r--. 2 boinc boinc    597548 Mar 20 08:43 input.tar.gz
[2026-03-20 09:40:03] -rw-------. 1 boinc boinc 215906926 Mar 20 09:37 HITS.pool.root.1
[2026-03-20 09:40:03] -rw-------. 1 boinc boinc    890880 Mar 20 09:38 result.tar.gz
09:40:04 (1742690): run_atlas exited; CPU time 36180.830320
09:40:04 (1742690): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN