Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:51:34 (27367): wrapper (7.7.26015): starting
08:51:34 (27367): wrapper: running run_atlas (--nthreads 12)
[2026-03-18 08:51:34] Arguments: --nthreads 12
[2026-03-18 08:51:34] Threads: 12
[2026-03-18 08:51:34] Checking for CVMFS
[2026-03-18 08:51:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 08:51:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 08:51:34] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 08:51:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 08:51:34] 2.11.2.0 30551 278926 96444 157415 1 49 19367701 20275200 1 130560 0 117208686 99.921 15431041 28494 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-18 08:51:34] CVMFS is ok
[2026-03-18 08:51:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 08:51:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 08:51:34] Further information can be found at the LHC@home message board.
[2026-03-18 08:51:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 08:51:34] Checking for apptainer binary...
[2026-03-18 08:51:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 08:51:34] Running /usr/bin/apptainer --version
[2026-03-18 08:51:34] apptainer version 1.3.2-1.el7
[2026-03-18 08:51:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 08:51:36] c-205-16.aglt2.org
[2026-03-18 08:51:36] apptainer works
[2026-03-18 08:51:36] Set ATHENA_PROC_NUMBER=12
[2026-03-18 08:51:36] Set ATHENA_CORE_NUMBER=12
[2026-03-18 08:51:36] Starting ATLAS job with PandaID=7058316020
[2026-03-18 08:51:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 11:43:21]  *** The last 200 lines of the pilot log: ***
[2026-03-18 11:43:21] 2026-03-18 15:42:24,821 | INFO     | mean x: 1773843442.5
[2026-03-18 11:43:21] 2026-03-18 15:42:24,821 | INFO     | mean y: 2691525.964285714
[2026-03-18 11:43:21] 2026-03-18 15:42:24,821 | INFO     | intersect: 1356347556.4977427
[2026-03-18 11:43:21] 2026-03-18 15:42:24,821 | INFO     | chi2: 2.472219958914559
[2026-03-18 11:43:21] 2026-03-18 15:42:24,822 | INFO     | sum of square deviations: 1342841922.0
[2026-03-18 11:43:21] 2026-03-18 15:42:24,822 | INFO     | sum of deviations: 10850211215.000004
[2026-03-18 11:43:21] 2026-03-18 15:42:24,822 | INFO     | mean x: 1773843290.0
[2026-03-18 11:43:21] 2026-03-18 15:42:24,823 | INFO     | mean y: 2705506.7607361963
[2026-03-18 11:43:21] 2026-03-18 15:42:24,823 | INFO     | intersect: -14330012323.603891
[2026-03-18 11:43:21] 2026-03-18 15:42:24,823 | INFO     | chi2: 1.6974705458443515
[2026-03-18 11:43:21] 2026-03-18 15:42:24,823 | INFO     | current chi2=1.6974705458443515 (change=31.338207196189984 %)
[2026-03-18 11:43:21] 2026-03-18 15:42:24,823 | INFO     | sum of square deviations: 1223016419.5
[2026-03-18 11:43:21] 2026-03-18 15:42:24,824 | INFO     | sum of deviations: 10506050160.499998
[2026-03-18 11:43:21] 2026-03-18 15:42:24,824 | INFO     | mean x: 1773843137.5
[2026-03-18 11:43:21] 2026-03-18 15:42:24,824 | INFO     | mean y: 2705068.917721519
[2026-03-18 11:43:21] 2026-03-18 15:42:24,824 | INFO     | intersect: -15235099331.985252
[2026-03-18 11:43:21] 2026-03-18 15:42:24,825 | INFO     | chi2: 1.6988547665811486
[2026-03-18 11:43:21] 2026-03-18 15:42:24,825 | INFO     | current chi2=1.6988547665811486 (change=-0.08154608279866084 %)
[2026-03-18 11:43:21] 2026-03-18 15:42:24,825 | INFO     | right removable region: 157
[2026-03-18 11:43:21] 2026-03-18 15:42:24,825 | INFO     | sum of square deviations: 1342841922.0
[2026-03-18 11:43:21] 2026-03-18 15:42:24,826 | INFO     | sum of deviations: -29183950925.0
[2026-03-18 11:43:21] 2026-03-18 15:42:24,826 | INFO     | mean x: 1773843595.0
[2026-03-18 11:43:21] 2026-03-18 15:42:24,826 | INFO     | mean y: 2724695.8404907975
[2026-03-18 11:43:21] 2026-03-18 15:42:24,826 | INFO     | intersect: 38553624527.74608
[2026-03-18 11:43:21] 2026-03-18 15:42:24,826 | INFO     | chi2: 1.0208596436414794
[2026-03-18 11:43:21] 2026-03-18 15:42:24,827 | INFO     | current chi2=1.0208596436414794 (change=58.70676312759431 %)
[2026-03-18 11:43:21] 2026-03-18 15:42:24,827 | INFO     | sum of square deviations: 1223016419.5
[2026-03-18 11:43:21] 2026-03-18 15:42:24,828 | INFO     | sum of deviations: -34506018748.5
[2026-03-18 11:43:21] 2026-03-18 15:42:24,828 | INFO     | mean x: 1773843747.5
[2026-03-18 11:43:21] 2026-03-18 15:42:24,828 | INFO     | mean y: 2731400.3860759493
[2026-03-18 11:43:21] 2026-03-18 15:42:24,828 | INFO     | intersect: 50049717387.023926
[2026-03-18 11:43:21] 2026-03-18 15:42:24,828 | INFO     | chi2: 0.9402728547098073
[2026-03-18 11:43:21] 2026-03-18 15:42:24,828 | INFO     | current chi2=0.9402728547098073 (change=7.8940126033597835 %)
[2026-03-18 11:43:21] 2026-03-18 15:42:24,828 | INFO     | left removable region: 20
[2026-03-18 11:43:21] 2026-03-18 15:42:24,829 | INFO     | sum of square deviations: 797291228.0
[2026-03-18 11:43:21] 2026-03-18 15:42:24,829 | INFO     | sum of deviations: -13187939651.999998
[2026-03-18 11:43:21] 2026-03-18 15:42:24,829 | INFO     | mean x: 1773843717.0
[2026-03-18 11:43:21] 2026-03-18 15:42:24,830 | INFO     | mean y: 2735209.321167883
[2026-03-18 11:43:21] 2026-03-18 15:42:24,830 | INFO     | intersect: 29343762766.53814
[2026-03-18 11:43:21] 2026-03-18 15:42:24,830 | INFO     | chi2: 0.11578112118354279
[2026-03-18 11:43:21] 2026-03-18 15:42:24,830 | INFO     | current memory leak: -16.54 B/s (using 137 data points, chi2=0.12)
[2026-03-18 11:43:21] 2026-03-18 15:42:24,830 | INFO     | could have reported an average CPU frequency of 1706 MHz (9 samples)
[2026-03-18 11:43:21] 2026-03-18 15:42:24,831 | INFO     | ..............................
[2026-03-18 11:43:21] 2026-03-18 15:42:24,831 | INFO     | . Timing measurements:
[2026-03-18 11:43:21] 2026-03-18 15:42:24,831 | INFO     | . get job = 0 s
[2026-03-18 11:43:21] 2026-03-18 15:42:24,831 | INFO     | . initial setup = 7 s
[2026-03-18 11:43:21] 2026-03-18 15:42:24,831 | INFO     | . payload setup = 14 s
[2026-03-18 11:43:21] 2026-03-18 15:42:24,831 | INFO     | . stage-in = 0 s
[2026-03-18 11:43:21] 2026-03-18 15:42:24,831 | INFO     | . payload execution = 10195 s
[2026-03-18 11:43:21] 2026-03-18 15:42:24,831 | INFO     | . stage-out = 0 s
[2026-03-18 11:43:21] 2026-03-18 15:42:24,831 | INFO     | . log creation = 0 s
[2026-03-18 11:43:21] 2026-03-18 15:42:24,831 | INFO     | ..............................
[2026-03-18 11:43:21] 2026-03-18 15:42:25,023 | INFO     | 
[2026-03-18 11:43:21] 2026-03-18 15:42:25,023 | INFO     | job summary report
[2026-03-18 11:43:21] 2026-03-18 15:42:25,024 | INFO     | --------------------------------------------------
[2026-03-18 11:43:21] 2026-03-18 15:42:25,024 | INFO     | PanDA job id: 7058316020
[2026-03-18 11:43:21] 2026-03-18 15:42:25,024 | INFO     | task id: 49176688
[2026-03-18 11:43:21] 2026-03-18 15:42:25,024 | INFO     | errors: (none)
[2026-03-18 11:43:21] 2026-03-18 15:42:25,024 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 11:43:21] 2026-03-18 15:42:25,024 | INFO     | pilot state: finished 
[2026-03-18 11:43:21] 2026-03-18 15:42:25,025 | INFO     | transexitcode: 0
[2026-03-18 11:43:21] 2026-03-18 15:42:25,025 | INFO     | exeerrorcode: 0
[2026-03-18 11:43:21] 2026-03-18 15:42:25,025 | INFO     | exeerrordiag: 
[2026-03-18 11:43:21] 2026-03-18 15:42:25,025 | INFO     | exitcode: 0
[2026-03-18 11:43:21] 2026-03-18 15:42:25,025 | INFO     | exitmsg: OK
[2026-03-18 11:43:21] 2026-03-18 15:42:25,025 | INFO     | cpuconsumptiontime: 113018 s
[2026-03-18 11:43:21] 2026-03-18 15:42:25,025 | INFO     | nevents: 400
[2026-03-18 11:43:21] 2026-03-18 15:42:25,026 | INFO     | neventsw: 0
[2026-03-18 11:43:21] 2026-03-18 15:42:25,026 | INFO     | pid: 3310
[2026-03-18 11:43:21] 2026-03-18 15:42:25,026 | INFO     | pgrp: 3310
[2026-03-18 11:43:21] 2026-03-18 15:42:25,026 | INFO     | corecount: 12
[2026-03-18 11:43:21] 2026-03-18 15:42:25,026 | INFO     | event service: False
[2026-03-18 11:43:21] 2026-03-18 15:42:25,026 | INFO     | sizes: {0: 2279813, 1: 2280274, 11: 2280274, 10214: 2309006, 10215: 2318004, 10216: 2318446}
[2026-03-18 11:43:21] 2026-03-18 15:42:25,027 | INFO     | --------------------------------------------------
[2026-03-18 11:43:21] 2026-03-18 15:42:25,027 | INFO     | 
[2026-03-18 11:43:21] 2026-03-18 15:42:25,027 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-18 11:43:21] 2026-03-18 15:42:25,053 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,053 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,053 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,053 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,054 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,054 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,054 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,054 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,054 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,054 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,055 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,055 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,055 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,055 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,055 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,055 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,056 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,056 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 11:43:21] 2026-03-18 15:42:25,056 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,056 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 11:43:21] 2026-03-18 15:42:25,056 | INFO     | job 7058316020 has completed (purged errors)
[2026-03-18 11:43:21] 2026-03-18 15:42:25,057 | INFO     | overall cleanup function is called
[2026-03-18 11:43:21] 2026-03-18 15:42:26,062 | INFO     | --- collectZombieJob: --- 10, [3310]
[2026-03-18 11:43:21] 2026-03-18 15:42:26,062 | INFO     | zombie collector waiting for pid 3310
[2026-03-18 11:43:21] 2026-03-18 15:42:26,062 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 11:43:21] 2026-03-18 15:42:26,062 | INFO     | collected zombie processes
[2026-03-18 11:43:21] 2026-03-18 15:42:26,062 | INFO     | will attempt to kill all subprocesses of pid=3310
[2026-03-18 11:43:21] 2026-03-18 15:42:26,152 | INFO     | process IDs to be killed: [3310] (in reverse order)
[2026-03-18 11:43:21] 2026-03-18 15:42:26,208 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 11:43:21] 2026-03-18 15:42:26,210 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 11:43:21] 2026-03-18 15:42:26,213 | INFO     | did not find any defunct processes belonging to 3310
[2026-03-18 11:43:21] 2026-03-18 15:42:26,215 | INFO     | did not find any defunct processes belonging to 3310
[2026-03-18 11:43:21] 2026-03-18 15:42:26,216 | INFO     | ready for new job
[2026-03-18 11:43:21] 2026-03-18 15:42:26,216 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 11:43:21] 2026-03-18 15:42:26,218 | INFO     | **************************************
[2026-03-18 11:43:21] 2026-03-18 15:42:26,218 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 11:43:21] 2026-03-18 15:42:26,219 | INFO     | **************************************
[2026-03-18 11:43:21] 2026-03-18 15:42:26,219 | INFO     | 
[2026-03-18 11:43:21] 2026-03-18 15:42:26,219 | INFO     | architecture information:
[2026-03-18 11:43:21] 2026-03-18 15:42:26,220 | INFO     | executing command: cat /etc/os-release
[2026-03-18 11:43:21] 2026-03-18 15:42:26,237 | INFO     | cat /etc/os-release:
[2026-03-18 11:43:21] NAME="CentOS Linux"
[2026-03-18 11:43:21] VERSION="7 (Core)"
[2026-03-18 11:43:21] ID="centos"
[2026-03-18 11:43:21] ID_LIKE="rhel fedora"
[2026-03-18 11:43:21] VERSION_ID="7"
[2026-03-18 11:43:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 11:43:21] ANSI_COLOR="0;31"
[2026-03-18 11:43:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 11:43:21] HOME_URL="https://www.centos.org/"
[2026-03-18 11:43:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 11:43:21] 
[2026-03-18 11:43:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 11:43:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 11:43:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 11:43:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 11:43:21] 
[2026-03-18 11:43:21] 2026-03-18 15:42:26,238 | INFO     | **************************************
[2026-03-18 11:43:21] 2026-03-18 15:42:26,741 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-18 11:43:21] 2026-03-18 15:42:26,759 | INFO     | sufficient remaining disk space (29391585280 B)
[2026-03-18 11:43:21] 2026-03-18 15:42:26,759 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 11:43:21] 2026-03-18 15:42:26,759 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 11:43:21] 2026-03-18 15:42:26,759 | INFO     | update_server=False
[2026-03-18 11:43:21] 2026-03-18 15:42:26,759 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 11:43:21] 2026-03-18 15:42:26,760 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 11:43:21] 2026-03-18 15:42:26,760 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 11:43:21] 2026-03-18 15:42:26,761 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 11:43:21] 2026-03-18 15:42:26,913 | INFO     | all data control threads have been joined
[2026-03-18 11:43:21] 2026-03-18 15:42:27,429 | INFO     | all payload control threads have been joined
[2026-03-18 11:43:21] 2026-03-18 15:42:27,765 | INFO     | [job] retrieve thread has finished
[2026-03-18 11:43:21] 2026-03-18 15:42:27,766 | INFO     | [job] queue monitor thread has finished
[2026-03-18 11:43:21] 2026-03-18 15:42:27,918 | INFO     | [data] control thread has finished
[2026-03-18 11:43:21] 2026-03-18 15:42:27,973 | WARNING  | process 3310 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 11:43:21] 2026-03-18 15:42:27,994 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 11:43:21] 2026-03-18 15:42:28,045 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 11:43:21] 2026-03-18 15:42:28,049 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 11:43:21] 2026-03-18 15:42:28,050 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 11:43:21] 2026-03-18 15:42:28,051 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-18 11:43:21] 2026-03-18 15:42:28,051 | WARNING  | maxPSS not found in memory monitor output
[2026-03-18 11:43:21] 2026-03-18 15:42:28,052 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7058316020/payload.stdout) since it has not been created yet
[2026-03-18 11:43:21] 2026-03-18 15:42:28,052 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-18 11:43:21] 2026-03-18 15:42:28,069 | INFO     | sufficient remaining disk space (29391585280 B)
[2026-03-18 11:43:21] 2026-03-18 15:42:28,070 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-18 11:43:21] 2026-03-18 15:42:28,070 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7058316020/HITS.49176688._000256.pool.root.1 since it does not exist
[2026-03-18 11:43:21] 2026-03-18 15:42:28,154 | INFO     | number of running child processes to parent process 3310: 1
[2026-03-18 11:43:21] 2026-03-18 15:42:28,155 | INFO     | maximum number of monitored processes: 6
[2026-03-18 11:43:21] 2026-03-18 15:42:28,155 | INFO     | aborting job monitoring since job object (job id=7058316020) has expired
[2026-03-18 11:43:21] 2026-03-18 15:42:28,155 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 11:43:21] 2026-03-18 15:42:28,155 | INFO     | will abort loop
[2026-03-18 11:43:21] 2026-03-18 15:42:28,358 | INFO     | [payload] validate_post thread has finished
[2026-03-18 11:43:21] 2026-03-18 15:42:28,435 | INFO     | [payload] control thread has finished
[2026-03-18 11:43:21] 2026-03-18 15:42:28,455 | INFO     | all job control threads have been joined
[2026-03-18 11:43:21] 2026-03-18 15:42:28,486 | INFO     | [payload] failed_post thread has finished
[2026-03-18 11:43:21] 2026-03-18 15:42:28,749 | INFO     | [job] validate thread has finished
[2026-03-18 11:43:21] 2026-03-18 15:42:28,766 | INFO     | [data] copytool_out thread has finished
[2026-03-18 11:43:21] 2026-03-18 15:42:28,774 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 11:43:21] 2026-03-18 15:42:29,161 | INFO     | [job] job monitor thread has finished
[2026-03-18 11:43:21] 2026-03-18 15:42:29,249 | INFO     | [data] copytool_in thread has finished
[2026-03-18 11:43:21] 2026-03-18 15:42:29,461 | INFO     | [job] control thread has finished
[2026-03-18 11:43:21] 2026-03-18 15:42:30,767 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 11:43:21] 2026-03-18 15:42:36,967 | INFO     | job.realtimelogging is not enabled
[2026-03-18 11:43:21] 2026-03-18 15:42:37,969 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 11:43:21] 2026-03-18 15:42:57,378 | INFO     | PID=31079 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 11:43:21] 2026-03-18 15:42:57,379 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 11:43:21] 2026-03-18 15:42:57,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 11:43:21] 2026-03-18 15:42:57,379 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 11:43:21] 2026-03-18 15:43:14,053 | INFO     | [monitor] cgroup control has ended
[2026-03-18 11:43:21] 2026-03-18 15:43:15,928 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139672353105728)>', '<ExcThread(monitor, started 139671757629184)>']
[2026-03-18 11:43:21] 2026-03-18 15:43:16,454 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 11:43:21] 2026-03-18 15:43:16,454 | INFO     | [monitor] control thread has ended
[2026-03-18 11:43:21] 2026-03-18 15:43:20,930 | INFO     | all workflow threads have been joined
[2026-03-18 11:43:21] 2026-03-18 15:43:20,930 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 11:43:21] 2026-03-18 15:43:20,930 | INFO     | traces error code: 0
[2026-03-18 11:43:21] 2026-03-18 15:43:20,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 11:43:21] 2026-03-18 15:43:21,033 [wrapper] ==== pilot stdout END ====
[2026-03-18 11:43:21] 2026-03-18 15:43:21,037 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 11:43:21] 2026-03-18 15:43:21,041 [wrapper] pilotpid: 31079
[2026-03-18 11:43:21] 2026-03-18 15:43:21,045 [wrapper] Pilot exit status: 0
[2026-03-18 11:43:21] 2026-03-18 15:43:21,060 [wrapper] pandaids: 7058316020
[2026-03-18 11:43:21] 2026-03-18 15:43:21,105 [wrapper] cleanup supervisor_pilot  4025 31080
[2026-03-18 11:43:21] 2026-03-18 15:43:21,109 [wrapper] Test setup, not cleaning
[2026-03-18 11:43:21] 2026-03-18 15:43:21,113 [wrapper] apfmon messages muted
[2026-03-18 11:43:21] 2026-03-18 15:43:21,118 [wrapper] ==== wrapper stdout END ====
[2026-03-18 11:43:21] 2026-03-18 15:43:21,122 [wrapper] ==== wrapper stderr END ====
[2026-03-18 11:43:21]  *** Error codes and diagnostics ***
[2026-03-18 11:43:21]     "exeErrorCode": 0,
[2026-03-18 11:43:21]     "exeErrorDiag": "",
[2026-03-18 11:43:21]     "pilotErrorCode": 0,
[2026-03-18 11:43:21]     "pilotErrorDiag": "",
[2026-03-18 11:43:21]  *** Listing of results directory ***
[2026-03-18 11:43:21] total 469716
[2026-03-18 11:43:21] -rw-r--r-- 1 boincer umatlas      5111 Mar 18 00:11 queuedata.json
[2026-03-18 11:43:21] -rw-r--r-- 1 boincer umatlas    585013 Mar 18 00:11 pilot3.tar.gz
[2026-03-18 11:43:21] -rwx------ 1 boincer umatlas     36322 Mar 18 00:11 runpilot2-wrapper.sh
[2026-03-18 11:43:21] -rw-r--r-- 1 boincer umatlas       100 Mar 18 08:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 11:43:21] -rwxr-xr-x 1 boincer umatlas      7986 Mar 18 08:51 run_atlas
[2026-03-18 11:43:21] -rw-r--r-- 1 boincer umatlas       105 Mar 18 08:51 job.xml
[2026-03-18 11:43:21] -rw-r--r-- 2 boincer umatlas 239909667 Mar 18 08:51 EVNT.49134869._000001.pool.root.1
[2026-03-18 11:43:21] -rw-r--r-- 2 boincer umatlas     15845 Mar 18 08:51 start_atlas.sh
[2026-03-18 11:43:21] drwxrwx--x 2 boincer umatlas      4096 Mar 18 08:51 shared
[2026-03-18 11:43:21] -rw-r--r-- 2 boincer umatlas    597539 Mar 18 08:51 input.tar.gz
[2026-03-18 11:43:21] -rw-r--r-- 1 boincer umatlas         0 Mar 18 08:51 boinc_lockfile
[2026-03-18 11:43:21] -rw-r--r-- 1 boincer umatlas      2610 Mar 18 08:51 pandaJob.out
[2026-03-18 11:43:21] -rw------- 1 boincer umatlas        57 Mar 18 08:51 setup.sh.local
[2026-03-18 11:43:21] -rw------- 1 boincer umatlas   1010909 Mar 18 08:51 agis_schedconf.cvmfs.json
[2026-03-18 11:43:21] -rw------- 1 boincer umatlas   1511579 Mar 18 08:51 agis_ddmendpoints.agis.ALL.json
[2026-03-18 11:43:21] -rw------- 1 boincer umatlas       445 Mar 18 08:51 workernode_map.json
[2026-03-18 11:43:21] drwx------ 5 boincer umatlas      4096 Mar 18 08:51 pilot3
[2026-03-18 11:43:21] -rw-r--r-- 1 boincer umatlas      5953 Mar 18 11:38 init_data.xml
[2026-03-18 11:43:21] -rw------- 1 boincer umatlas 233360850 Mar 18 11:41 HITS.49176688._000256.pool.root.1
[2026-03-18 11:43:21] -rw-r--r-- 1 boincer umatlas       532 Mar 18 11:41 boinc_task_state.xml
[2026-03-18 11:43:21] -rw------- 1 boincer umatlas        95 Mar 18 11:42 pilot_heartbeat.json
[2026-03-18 11:43:21] -rw------- 1 boincer umatlas      1051 Mar 18 11:42 memory_monitor_summary.json
[2026-03-18 11:43:21] -rw------- 1 boincer umatlas    461966 Mar 18 11:42 log.49176688._000256.job.log.tgz.1
[2026-03-18 11:43:21] -rw------- 1 boincer umatlas      6424 Mar 18 11:42 heartbeat.json
[2026-03-18 11:43:21] -rw-r--r-- 1 boincer umatlas      8192 Mar 18 11:42 boinc_mmap_file
[2026-03-18 11:43:21] -rw-r--r-- 1 boincer umatlas        29 Mar 18 11:42 wrapper_checkpoint.txt
[2026-03-18 11:43:21] -rw------- 1 boincer umatlas      6293 Mar 18 11:43 pilotlog.txt
[2026-03-18 11:43:21] -rw------- 1 boincer umatlas   1429879 Mar 18 11:43 log.49176688._000256.job.log.1
[2026-03-18 11:43:21] -rw------- 1 boincer umatlas       357 Mar 18 11:43 output.list
[2026-03-18 11:43:21] -rw-r--r-- 1 boincer umatlas       620 Mar 18 11:43 runtime_log
[2026-03-18 11:43:21] -rw------- 1 boincer umatlas   1904640 Mar 18 11:43 result.tar.gz
[2026-03-18 11:43:21] -rw------- 1 boincer umatlas       664 Mar 18 11:43 socNDm3QxM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm2ZyLDm83d99m.diag
[2026-03-18 11:43:21] -rw-r--r-- 1 boincer umatlas      9344 Mar 18 11:43 runtime_log.err
[2026-03-18 11:43:21] -rw-r--r-- 1 boincer umatlas     21388 Mar 18 11:43 stderr.txt
[2026-03-18 11:43:21] HITS file was successfully produced:
[2026-03-18 11:43:21] -rw------- 1 boincer umatlas 233360850 Mar 18 11:41 shared/HITS.pool.root.1
[2026-03-18 11:43:21]  *** Contents of shared directory: ***
[2026-03-18 11:43:21] total 464644
[2026-03-18 11:43:21] -rw-r--r-- 2 boincer umatlas 239909667 Mar 18 08:51 ATLAS.root_0
[2026-03-18 11:43:21] -rw-r--r-- 2 boincer umatlas     15845 Mar 18 08:51 start_atlas.sh
[2026-03-18 11:43:21] -rw-r--r-- 2 boincer umatlas    597539 Mar 18 08:51 input.tar.gz
[2026-03-18 11:43:21] -rw------- 1 boincer umatlas 233360850 Mar 18 11:41 HITS.pool.root.1
[2026-03-18 11:43:21] -rw------- 1 boincer umatlas   1904640 Mar 18 11:43 result.tar.gz
11:43:22 (27367): run_atlas exited; CPU time 112996.927477
11:43:22 (27367): called boinc_finish(0)

</stderr_txt>
]]>

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