Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:20:44 (2061): wrapper (7.7.26015): starting
09:20:44 (2061): wrapper: running run_atlas (--nthreads 12)
[2026-03-20 09:20:44] Arguments: --nthreads 12
[2026-03-20 09:20:44] Threads: 12
[2026-03-20 09:20:44] Checking for CVMFS
[2026-03-20 09:20:44] No cvmfs_config command found, will try listing directly
[2026-03-20 09:20:44] CVMFS is ok
[2026-03-20 09:20:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 09:20:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-20 09:20:44] Further information can be found at the LHC@home message board.
[2026-03-20 09:20:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 09:20:44] Checking for apptainer binary...
[2026-03-20 09:20:44] which: no apptainer in ((null))
[2026-03-20 09:20:44] apptainer is not installed, using version from CVMFS
[2026-03-20 09:20:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 09:20:44] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-20 09:20:44] apptainer works
[2026-03-20 09:20:44] Set ATHENA_PROC_NUMBER=12
[2026-03-20 09:20:44] Set ATHENA_CORE_NUMBER=12
[2026-03-20 09:20:44] Starting ATLAS job with PandaID=7058446459
[2026-03-20 09:20:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 10:14:03]  *** The last 200 lines of the pilot log: ***
[2026-03-20 10:14:03]  lfn=log.49176089._000198.job.log.tgz.1
[2026-03-20 10:14:03]  mtime=0
[2026-03-20 10:14:03]  protocol_id=None
[2026-03-20 10:14:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-20 10:14:03]  replicas=None
[2026-03-20 10:14:03]  scope=mc23_13p6TeV
[2026-03-20 10:14:03]  status=None
[2026-03-20 10:14:03]  status_code=0
[2026-03-20 10:14:03]  storage_token=
[2026-03-20 10:14:03]  surl=/var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7058446459/log.49176089._000198.job.log.tgz.1
[2026-03-20 10:14:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/94/log.49176089._000198.job.log.tgz.1
[2026-03-20 10:14:03]  workdir=None
[2026-03-20 10:14:03] ]
[2026-03-20 10:14:03] 2026-03-20 09:13:20,025 | INFO     | transferring file log.49176089._000198.job.log.tgz.1 from /var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7058446459/log.49176089._000198.job.log.tgz.1 to /var/lib/
[2026-03-20 10:14:03] 2026-03-20 09:13:20,025 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7058446459/log.49176089._000198.job.log.tgz.1 /var/lib/boinc/var/slot216/slots/2/
[2026-03-20 10:14:03] 2026-03-20 09:13:20,036 | INFO     | adding to output.list: log.49176089._000198.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/94/log.49176089._000198.job.log.tg
[2026-03-20 10:14:03] 2026-03-20 09:13:20,037 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-20 10:14:03] 2026-03-20 09:13:20,037 | INFO     | summary of transferred files:
[2026-03-20 10:14:03] 2026-03-20 09:13:20,037 | INFO     |  -- lfn=log.49176089._000198.job.log.tgz.1, status_code=0, status=transferred
[2026-03-20 10:14:03] 2026-03-20 09:13:20,037 | INFO     | stage-out finished correctly
[2026-03-20 10:14:03] 2026-03-20 09:13:21,199 | INFO     | time since job start (3149s) is within the limit (345600.0s)
[2026-03-20 10:14:03] 2026-03-20 09:13:22,422 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-20 10:14:03] 2026-03-20 09:13:23,200 | INFO     | time since job start (3151s) is within the limit (345600.0s)
[2026-03-20 10:14:03] 2026-03-20 09:13:23,226 | INFO     | job 7058446459 has state=finished
[2026-03-20 10:14:03] 2026-03-20 09:13:23,226 | INFO     | preparing for final server update for job 7058446459 in state='finished'
[2026-03-20 10:14:03] 2026-03-20 09:13:23,805 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-20 10:14:03] 2026-03-20 09:13:23,805 | INFO     | reading metadata from: /var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7058446459/jobReport.json
[2026-03-20 10:14:03] 2026-03-20 09:13:23,806 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot216/slots/2/workernode_map.json
[2026-03-20 10:14:03] 2026-03-20 09:13:23,807 | INFO     | this job has now completed (state=finished)
[2026-03-20 10:14:03] 2026-03-20 09:13:23,807 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-20 10:14:03] 2026-03-20 09:13:23,807 | INFO     | log transfer has been attempted: DONE
[2026-03-20 10:14:03] 2026-03-20 09:13:23,807 | INFO     | job 7058446459 has finished - writing final server update
[2026-03-20 10:14:03] 2026-03-20 09:13:23,807 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3281177/.job.ad'
[2026-03-20 10:14:03] 2026-03-20 09:13:23,807 | INFO     | total number of processed events: 400 (read)
[2026-03-20 10:14:03] 2026-03-20 09:13:23,821 | INFO     | using path: /var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7058446459/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 10:14:03] 2026-03-20 09:13:23,822 | INFO     | extracted standard info from prmon json
[2026-03-20 10:14:03] 2026-03-20 09:13:23,822 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 10:14:03] 2026-03-20 09:13:23,822 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 10:14:03] 2026-03-20 09:13:23,822 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 10:14:03] 2026-03-20 09:13:23,822 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | fitting pss+swap vs Time
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | sum of square deviations: 28242390.0
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | sum of deviations: -668732691.0
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | mean x: 1773996519.0
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | mean y: 2722751.3333333335
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | intersect: 42008001553.00355
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | chi2: 0.005553775728070313
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | current memory leak: -23.68 B/s (using 45 data points, chi2=0.01)
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | could have reported an average CPU frequency of 3624 MHz (5 samples)
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | ..............................
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | . Timing measurements:
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | . get job = 0 s
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | . initial setup = 3 s
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | . payload setup = 5 s
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | . stage-in = 0 s
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | . payload execution = 3127 s
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | . stage-out = 0 s
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | . log creation = 0 s
[2026-03-20 10:14:03] 2026-03-20 09:13:23,823 | INFO     | ..............................
[2026-03-20 10:14:03] 2026-03-20 09:13:23,866 | INFO     | 
[2026-03-20 10:14:03] 2026-03-20 09:13:23,866 | INFO     | job summary report
[2026-03-20 10:14:03] 2026-03-20 09:13:23,866 | INFO     | --------------------------------------------------
[2026-03-20 10:14:03] 2026-03-20 09:13:23,866 | INFO     | PanDA job id: 7058446459
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | task id: 49176089
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | errors: (none)
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | pilot state: finished 
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | transexitcode: 0
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | exeerrorcode: 0
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | exeerrordiag: 
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | exitcode: 0
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | exitmsg: OK
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | cpuconsumptiontime: 34848 s
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | nevents: 400
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | neventsw: 0
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | pid: 13028
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | pgrp: 13028
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | corecount: 12
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | event service: False
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | sizes: {0: 2279218, 1: 2280348, 11: 2280348, 3136: 2305845, 3137: 2314867, 3139: 2314923, 3141: 2315277}
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | --------------------------------------------------
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | 
[2026-03-20 10:14:03] 2026-03-20 09:13:23,867 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/2
[2026-03-20 10:14:03] 2026-03-20 09:13:23,881 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,881 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,881 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,881 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,881 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,881 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,881 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,881 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,882 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,882 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,882 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,882 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,882 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 10:14:03] 2026-03-20 09:13:23,882 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,882 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 10:14:03] 2026-03-20 09:13:23,882 | INFO     | job 7058446459 has completed (purged errors)
[2026-03-20 10:14:03] 2026-03-20 09:13:23,882 | INFO     | overall cleanup function is called
[2026-03-20 10:14:03] 2026-03-20 09:13:24,353 | WARNING  | process 13028 can no longer be monitored (due to stat problems) - aborting
[2026-03-20 10:14:03] 2026-03-20 09:13:24,583 | INFO     | using path: /var/lib/boinc/var/slot216/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 10:14:03] 2026-03-20 09:13:24,781 | INFO     | number of running child processes to parent process 13028: 1
[2026-03-20 10:14:03] 2026-03-20 09:13:24,781 | INFO     | maximum number of monitored processes: 6
[2026-03-20 10:14:03] 2026-03-20 09:13:24,781 | INFO     | aborting job monitoring since job object (job id=7058446459) has expired
[2026-03-20 10:14:03] 2026-03-20 09:13:24,888 | INFO     | --- collectZombieJob: --- 10, [13028]
[2026-03-20 10:14:03] 2026-03-20 09:13:24,889 | INFO     | zombie collector waiting for pid 13028
[2026-03-20 10:14:03] 2026-03-20 09:13:24,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 10:14:03] 2026-03-20 09:13:24,889 | INFO     | collected zombie processes
[2026-03-20 10:14:03] 2026-03-20 09:13:24,889 | INFO     | will attempt to kill all subprocesses of pid=13028
[2026-03-20 10:14:03] 2026-03-20 09:13:25,085 | INFO     | process IDs to be killed: [13028] (in reverse order)
[2026-03-20 10:14:03] 2026-03-20 09:13:25,197 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 10:14:03] 2026-03-20 09:13:25,197 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 10:14:03] 2026-03-20 09:13:25,219 | INFO     | did not find any defunct processes belonging to 13028
[2026-03-20 10:14:03] 2026-03-20 09:13:25,240 | INFO     | did not find any defunct processes belonging to 13028
[2026-03-20 10:14:03] 2026-03-20 09:13:25,241 | INFO     | ready for new job
[2026-03-20 10:14:03] 2026-03-20 09:13:25,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 10:14:03] 2026-03-20 09:13:25,242 | INFO     | **************************************
[2026-03-20 10:14:03] 2026-03-20 09:13:25,242 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 10:14:03] 2026-03-20 09:13:25,242 | INFO     | **************************************
[2026-03-20 10:14:03] 2026-03-20 09:13:25,242 | INFO     | 
[2026-03-20 10:14:03] 2026-03-20 09:13:25,247 | INFO     | architecture information:
[2026-03-20 10:14:03] 2026-03-20 09:13:25,247 | INFO     | executing command: cat /etc/os-release
[2026-03-20 10:14:03] 2026-03-20 09:13:25,257 | INFO     | cat /etc/os-release:
[2026-03-20 10:14:03] NAME="CentOS Linux"
[2026-03-20 10:14:03] VERSION="7 (Core)"
[2026-03-20 10:14:03] ID="centos"
[2026-03-20 10:14:03] ID_LIKE="rhel fedora"
[2026-03-20 10:14:03] VERSION_ID="7"
[2026-03-20 10:14:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 10:14:03] ANSI_COLOR="0;31"
[2026-03-20 10:14:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 10:14:03] HOME_URL="https://www.centos.org/"
[2026-03-20 10:14:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 10:14:03] 
[2026-03-20 10:14:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 10:14:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 10:14:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 10:14:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 10:14:03] 
[2026-03-20 10:14:03] 2026-03-20 09:13:25,257 | INFO     | **************************************
[2026-03-20 10:14:03] 2026-03-20 09:13:25,760 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/2
[2026-03-20 10:14:03] 2026-03-20 09:13:25,772 | INFO     | sufficient remaining disk space (205075251200 B)
[2026-03-20 10:14:03] 2026-03-20 09:13:25,772 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 10:14:03] 2026-03-20 09:13:25,772 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 10:14:03] 2026-03-20 09:13:25,772 | INFO     | update_server=False
[2026-03-20 10:14:03] 2026-03-20 09:13:25,772 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 10:14:03] 2026-03-20 09:13:25,772 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 10:14:03] 2026-03-20 09:13:25,772 | INFO     | will abort loop
[2026-03-20 10:14:03] 2026-03-20 09:13:25,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 10:14:03] 2026-03-20 09:13:25,773 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 10:14:03] 2026-03-20 09:13:25,898 | INFO     | all payload control threads have been joined
[2026-03-20 10:14:03] 2026-03-20 09:13:26,778 | INFO     | [job] retrieve thread has finished
[2026-03-20 10:14:03] 2026-03-20 09:13:26,778 | INFO     | [job] job monitor thread has finished
[2026-03-20 10:14:03] 2026-03-20 09:13:26,779 | INFO     | [job] queue monitor thread has finished
[2026-03-20 10:14:03] 2026-03-20 09:13:26,806 | INFO     | [payload] failed_post thread has finished
[2026-03-20 10:14:03] 2026-03-20 09:13:26,830 | INFO     | all data control threads have been joined
[2026-03-20 10:14:03] 2026-03-20 09:13:26,834 | INFO     | [data] copytool_in thread has finished
[2026-03-20 10:14:03] 2026-03-20 09:13:26,904 | INFO     | [payload] control thread has finished
[2026-03-20 10:14:03] 2026-03-20 09:13:27,208 | INFO     | all job control threads have been joined
[2026-03-20 10:14:03] 2026-03-20 09:13:27,779 | INFO     | [data] copytool_out thread has finished
[2026-03-20 10:14:03] 2026-03-20 09:13:27,794 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 10:14:03] 2026-03-20 09:13:27,835 | INFO     | [data] control thread has finished
[2026-03-20 10:14:03] 2026-03-20 09:13:27,872 | INFO     | [job] validate thread has finished
[2026-03-20 10:14:03] 2026-03-20 09:13:27,934 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 10:14:03] 2026-03-20 09:13:28,130 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 10:14:03] 2026-03-20 09:13:28,214 | INFO     | [job] control thread has finished
[2026-03-20 10:14:03] 2026-03-20 09:13:28,337 | INFO     | [payload] validate_post thread has finished
[2026-03-20 10:14:03] 2026-03-20 09:13:28,468 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 10:14:03] 2026-03-20 09:13:32,474 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 10:14:03] 2026-03-20 09:13:36,729 | INFO     | job.realtimelogging is not enabled
[2026-03-20 10:14:03] 2026-03-20 09:13:37,735 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 10:14:03] 2026-03-20 09:13:56,578 | INFO     | PID=7042 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-20 10:14:03] 2026-03-20 09:13:56,578 | INFO     | .. there are 6 such processes running
[2026-03-20 10:14:03] 2026-03-20 09:13:56,579 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 10:14:03] 2026-03-20 09:13:56,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 10:14:03] 2026-03-20 09:13:56,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 10:14:03] 2026-03-20 09:13:56,649 | INFO     | [monitor] cgroup control has ended
[2026-03-20 10:14:03] 2026-03-20 09:13:57,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22798875047744)>', '<ExcThread(monitor, started 22798635640576)>']
[2026-03-20 10:14:03] 2026-03-20 09:13:58,589 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 10:14:03] 2026-03-20 09:13:58,589 | INFO     | [monitor] control thread has ended
[2026-03-20 10:14:03] 2026-03-20 09:14:02,891 | INFO     | all workflow threads have been joined
[2026-03-20 10:14:03] 2026-03-20 09:14:02,892 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 10:14:03] 2026-03-20 09:14:02,892 | INFO     | traces error code: 0
[2026-03-20 10:14:03] 2026-03-20 09:14:02,892 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 10:14:03] 2026-03-20 09:14:02,987 [wrapper] ==== pilot stdout END ====
[2026-03-20 10:14:03] 2026-03-20 09:14:02,989 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 10:14:03] 2026-03-20 09:14:02,991 [wrapper] pilotpid: 7042
[2026-03-20 10:14:03] 2026-03-20 09:14:02,994 [wrapper] Pilot exit status: 0
[2026-03-20 10:14:03] 2026-03-20 09:14:03,001 [wrapper] pandaids: 7058446459
[2026-03-20 10:14:03] 2026-03-20 09:14:03,081 [wrapper] cleanup supervisor_pilot  152129 7043
[2026-03-20 10:14:03] 2026-03-20 09:14:03,083 [wrapper] Test setup, not cleaning
[2026-03-20 10:14:03] 2026-03-20 09:14:03,085 [wrapper] apfmon messages muted
[2026-03-20 10:14:03] 2026-03-20 09:14:03,087 [wrapper] ==== wrapper stdout END ====
[2026-03-20 10:14:03] 2026-03-20 09:14:03,089 [wrapper] ==== wrapper stderr END ====
[2026-03-20 10:14:03]  *** Error codes and diagnostics ***
[2026-03-20 10:14:03]     "exeErrorCode": 0,
[2026-03-20 10:14:03]     "exeErrorDiag": "",
[2026-03-20 10:14:03]     "pilotErrorCode": 0,
[2026-03-20 10:14:03]     "pilotErrorDiag": "",
[2026-03-20 10:14:03]  *** Listing of results directory ***
[2026-03-20 10:14:03] total 462320
[2026-03-20 10:14:03] -rw-r--r--. 1 boinc boinc      5111 Mar 18 05:11 queuedata.json
[2026-03-20 10:14:03] -rw-r--r--. 1 boinc boinc    585013 Mar 18 05:11 pilot3.tar.gz
[2026-03-20 10:14:03] -rwx------. 1 boinc boinc     36322 Mar 18 05:11 runpilot2-wrapper.sh
[2026-03-20 10:14:03] -rw-r--r--. 1 boinc boinc       100 Mar 20 08:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 10:14:03] -rwxr-xr-x. 1 boinc boinc      7986 Mar 20 08:35 run_atlas
[2026-03-20 10:14:03] -rw-r--r--. 1 boinc boinc       105 Mar 20 08:35 job.xml
[2026-03-20 10:14:03] -rw-r--r--. 1 boinc boinc      6711 Mar 20 09:20 init_data.xml
[2026-03-20 10:14:03] -rw-r--r--. 2 boinc boinc 241155806 Mar 20 09:20 EVNT.49132503._000008.pool.root.1
[2026-03-20 10:14:03] -rw-r--r--. 2 boinc boinc     15845 Mar 20 09:20 start_atlas.sh
[2026-03-20 10:14:03] drwxrwx--x. 2 boinc boinc      4096 Mar 20 09:20 shared
[2026-03-20 10:14:03] -rw-r--r--. 2 boinc boinc    597538 Mar 20 09:20 input.tar.gz
[2026-03-20 10:14:03] -rw-r--r--. 1 boinc boinc         0 Mar 20 09:20 boinc_lockfile
[2026-03-20 10:14:03] -rw-r--r--. 1 boinc boinc      2619 Mar 20 09:20 pandaJob.out
[2026-03-20 10:14:03] -rw-------. 1 boinc boinc   1010740 Mar 20 09:20 agis_schedconf.cvmfs.json
[2026-03-20 10:14:03] -rw-------. 1 boinc boinc   1511579 Mar 20 09:20 agis_ddmendpoints.agis.ALL.json
[2026-03-20 10:14:03] -rw-------. 1 boinc boinc       444 Mar 20 09:20 workernode_map.json
[2026-03-20 10:14:03] drwx------. 5 boinc boinc      4096 Mar 20 09:20 pilot3
[2026-03-20 10:14:03] -rw-------. 1 boinc boinc 226593890 Mar 20 10:12 HITS.49176089._000198.pool.root.1
[2026-03-20 10:14:03] -rw-r--r--. 1 boinc boinc       529 Mar 20 10:13 boinc_task_state.xml
[2026-03-20 10:14:03] -rw-------. 1 boinc boinc      1030 Mar 20 10:13 memory_monitor_summary.json
[2026-03-20 10:14:03] -rw-------. 1 boinc boinc    378697 Mar 20 10:13 log.49176089._000198.job.log.tgz.1
[2026-03-20 10:14:03] -rw-------. 1 boinc boinc      6356 Mar 20 10:13 heartbeat.json
[2026-03-20 10:14:03] -rw-r--r--. 1 boinc boinc        27 Mar 20 10:13 wrapper_checkpoint.txt
[2026-03-20 10:14:03] -rw-r--r--. 1 boinc boinc      8192 Mar 20 10:13 boinc_mmap_file
[2026-03-20 10:14:03] -rw-------. 1 boinc boinc        95 Mar 20 10:13 pilot_heartbeat.json
[2026-03-20 10:14:03] -rw-------. 1 boinc boinc      4901 Mar 20 10:14 pilotlog.txt
[2026-03-20 10:14:03] -rw-------. 1 boinc boinc    486211 Mar 20 10:14 log.49176089._000198.job.log.1
[2026-03-20 10:14:03] -rw-------. 1 boinc boinc       357 Mar 20 10:14 output.list
[2026-03-20 10:14:03] -rw-r--r--. 1 boinc boinc       620 Mar 20 10:14 runtime_log
[2026-03-20 10:14:03] -rw-------. 1 boinc boinc    880640 Mar 20 10:14 result.tar.gz
[2026-03-20 10:14:03] -rw-r--r--. 1 boinc boinc      9223 Mar 20 10:14 runtime_log.err
[2026-03-20 10:14:03] -rw-------. 1 boinc boinc       661 Mar 20 10:14 mtxLDm2QxM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmMT1LDmg4KwQn.diag
[2026-03-20 10:14:03] -rw-r--r--. 1 boinc boinc     21508 Mar 20 10:14 stderr.txt
[2026-03-20 10:14:03] HITS file was successfully produced:
[2026-03-20 10:14:03] -rw-------. 1 boinc boinc 226593890 Mar 20 10:12 shared/HITS.pool.root.1
[2026-03-20 10:14:03]  *** Contents of shared directory: ***
[2026-03-20 10:14:03] total 458256
[2026-03-20 10:14:03] -rw-r--r--. 2 boinc boinc 241155806 Mar 20 09:20 ATLAS.root_0
[2026-03-20 10:14:03] -rw-r--r--. 2 boinc boinc     15845 Mar 20 09:20 start_atlas.sh
[2026-03-20 10:14:03] -rw-r--r--. 2 boinc boinc    597538 Mar 20 09:20 input.tar.gz
[2026-03-20 10:14:03] -rw-------. 1 boinc boinc 226593890 Mar 20 10:12 HITS.pool.root.1
[2026-03-20 10:14:03] -rw-------. 1 boinc boinc    880640 Mar 20 10:14 result.tar.gz
10:14:04 (2061): run_atlas exited; CPU time 34933.874240
10:14:04 (2061): called boinc_finish(0)

</stderr_txt>
]]>

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