Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:55:16 (1555760): wrapper (7.7.26015): starting
16:55:16 (1555760): wrapper: running run_atlas (--nthreads 4)
[2026-03-23 16:55:16] Arguments: --nthreads 4
[2026-03-23 16:55:16] Threads: 4
[2026-03-23 16:55:16] Checking for CVMFS
[2026-03-23 16:55:16] No cvmfs_config command found, will try listing directly
[2026-03-23 16:55:16] CVMFS is ok
[2026-03-23 16:55:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-23 16:55:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-23 16:55:17] Further information can be found at the LHC@home message board.
[2026-03-23 16:55:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 16:55:17] Checking for apptainer binary...
[2026-03-23 16:55:17] which: no apptainer in ((null))
[2026-03-23 16:55:17] apptainer is not installed, using version from CVMFS
[2026-03-23 16:55:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 16:55:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-03-23 16:55:17] apptainer works
[2026-03-23 16:55:17] Set ATHENA_PROC_NUMBER=4
[2026-03-23 16:55:17] Set ATHENA_CORE_NUMBER=4
[2026-03-23 16:55:17] Starting ATLAS job with PandaID=7057350768
[2026-03-23 16:55:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 00:29:28]  *** The last 200 lines of the pilot log: ***
[2026-03-24 00:29:28] 2026-03-23 23:27:49,994 | INFO     | log transfer has been attempted: DONE
[2026-03-24 00:29:28] 2026-03-23 23:27:49,994 | INFO     | job 7057350768 has finished - writing final server update
[2026-03-24 00:29:28] 2026-03-23 23:27:49,994 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3734198/.job.ad'
[2026-03-24 00:29:28] 2026-03-23 23:27:49,995 | INFO     | total number of processed events: 400 (read)
[2026-03-24 00:29:28] 2026-03-23 23:27:50,007 | INFO     | using path: /var/lib/boinc/var/slot44/slots/0/PanDA_Pilot-7057350768/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 00:29:28] 2026-03-23 23:27:50,008 | INFO     | extracted standard info from prmon json
[2026-03-24 00:29:28] 2026-03-23 23:27:50,008 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 00:29:28] 2026-03-23 23:27:50,008 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 00:29:28] 2026-03-23 23:27:50,008 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 00:29:28] 2026-03-23 23:27:50,008 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 00:29:28] 2026-03-23 23:27:50,016 | INFO     | fitting pss+swap vs Time
[2026-03-24 00:29:28] 2026-03-23 23:27:50,017 | INFO     | sum of square deviations: 27324754190.0
[2026-03-24 00:29:28] 2026-03-23 23:27:50,022 | INFO     | sum of deviations: 32334459892.999996
[2026-03-24 00:29:28] 2026-03-23 23:27:50,022 | INFO     | mean x: 1774294909.0
[2026-03-24 00:29:28] 2026-03-23 23:27:50,022 | INFO     | mean y: 2335835.152808989
[2026-03-24 00:29:28] 2026-03-23 23:27:50,022 | INFO     | intersect: -2097257345.9785516
[2026-03-24 00:29:28] 2026-03-23 23:27:50,023 | INFO     | chi2: 2.2757657770832145
[2026-03-24 00:29:28] 2026-03-23 23:27:50,023 | INFO     | sum of square deviations: 26414002230.0
[2026-03-24 00:29:28] 2026-03-23 23:27:50,028 | INFO     | sum of deviations: 60316924379.00007
[2026-03-24 00:29:28] 2026-03-23 23:27:50,028 | INFO     | mean x: 1774294756.5
[2026-03-24 00:29:28] 2026-03-23 23:27:50,028 | INFO     | mean y: 2340477.4
[2026-03-24 00:29:28] 2026-03-23 23:27:50,028 | INFO     | intersect: -4049298563.211486
[2026-03-24 00:29:28] 2026-03-23 23:27:50,029 | INFO     | chi2: 1.46297125139371
[2026-03-24 00:29:28] 2026-03-23 23:27:50,029 | INFO     | current chi2=1.46297125139371 (change=35.71520996906986 %)
[2026-03-24 00:29:28] 2026-03-23 23:27:50,030 | INFO     | sum of square deviations: 25523715770.0
[2026-03-24 00:29:28] 2026-03-23 23:27:50,034 | INFO     | sum of deviations: 59502826919.0
[2026-03-24 00:29:28] 2026-03-23 23:27:50,034 | INFO     | mean x: 1774294604.0
[2026-03-24 00:29:28] 2026-03-23 23:27:50,035 | INFO     | mean y: 2340337.9448275864
[2026-03-24 00:29:28] 2026-03-23 23:27:50,035 | INFO     | intersect: -4134030152.797698
[2026-03-24 00:29:28] 2026-03-23 23:27:50,035 | INFO     | chi2: 1.4631620865011727
[2026-03-24 00:29:28] 2026-03-23 23:27:50,035 | INFO     | current chi2=1.4631620865011727 (change=-0.013044351164170161 %)
[2026-03-24 00:29:28] 2026-03-23 23:27:50,035 | INFO     | right removable region: 434
[2026-03-24 00:29:28] 2026-03-23 23:27:50,036 | INFO     | sum of square deviations: 26414002230.0
[2026-03-24 00:29:28] 2026-03-23 23:27:50,041 | INFO     | sum of deviations: -32157567212.999996
[2026-03-24 00:29:28] 2026-03-23 23:27:50,041 | INFO     | mean x: 1774295061.5
[2026-03-24 00:29:28] 2026-03-23 23:27:50,041 | INFO     | mean y: 2346580.2590909093
[2026-03-24 00:29:28] 2026-03-23 23:27:50,041 | INFO     | intersect: 2162451368.585226
[2026-03-24 00:29:28] 2026-03-23 23:27:50,042 | INFO     | chi2: 0.8631576393832829
[2026-03-24 00:29:28] 2026-03-23 23:27:50,042 | INFO     | current chi2=0.8631576393832829 (change=62.07177170536556 %)
[2026-03-24 00:29:28] 2026-03-23 23:27:50,042 | INFO     | sum of square deviations: 25523715770.0
[2026-03-24 00:29:28] 2026-03-23 23:27:50,047 | INFO     | sum of deviations: -43396407842.0
[2026-03-24 00:29:28] 2026-03-23 23:27:50,047 | INFO     | mean x: 1774295214.0
[2026-03-24 00:29:28] 2026-03-23 23:27:50,047 | INFO     | mean y: 2348505.2620689655
[2026-03-24 00:29:28] 2026-03-23 23:27:50,047 | INFO     | intersect: 3019073790.5888405
[2026-03-24 00:29:28] 2026-03-23 23:27:50,048 | INFO     | chi2: 0.8344428473076353
[2026-03-24 00:29:28] 2026-03-23 23:27:50,048 | INFO     | current chi2=0.8344428473076353 (change=3.3267147002445654 %)
[2026-03-24 00:29:28] 2026-03-23 23:27:50,048 | INFO     | left removable region: 20
[2026-03-24 00:29:28] 2026-03-23 23:27:50,048 | INFO     | sum of square deviations: 22002747427.5
[2026-03-24 00:29:28] 2026-03-23 23:27:50,052 | INFO     | sum of deviations: -19208376010.000015
[2026-03-24 00:29:28] 2026-03-23 23:27:50,053 | INFO     | mean x: 1774295183.5
[2026-03-24 00:29:28] 2026-03-23 23:27:50,053 | INFO     | mean y: 2354171.6666666665
[2026-03-24 00:29:28] 2026-03-23 23:27:50,053 | INFO     | intersect: 1551312052.9357865
[2026-03-24 00:29:28] 2026-03-23 23:27:50,053 | INFO     | chi2: 0.008576931107336278
[2026-03-24 00:29:28] 2026-03-23 23:27:50,053 | INFO     | current memory leak: -0.87 B/s (using 414 data points, chi2=0.01)
[2026-03-24 00:29:28] 2026-03-23 23:27:50,054 | INFO     | could have reported an average CPU frequency of 2576 MHz (19 samples)
[2026-03-24 00:29:28] 2026-03-23 23:27:50,054 | INFO     | ..............................
[2026-03-24 00:29:28] 2026-03-23 23:27:50,055 | INFO     | . Timing measurements:
[2026-03-24 00:29:28] 2026-03-23 23:27:50,055 | INFO     | . get job = 0 s
[2026-03-24 00:29:28] 2026-03-23 23:27:50,055 | INFO     | . initial setup = 7 s
[2026-03-24 00:29:28] 2026-03-23 23:27:50,055 | INFO     | . payload setup = 11 s
[2026-03-24 00:29:28] 2026-03-23 23:27:50,055 | INFO     | . stage-in = 0 s
[2026-03-24 00:29:28] 2026-03-23 23:27:50,055 | INFO     | . payload execution = 27103 s
[2026-03-24 00:29:28] 2026-03-23 23:27:50,055 | INFO     | . stage-out = 1 s
[2026-03-24 00:29:28] 2026-03-23 23:27:50,055 | INFO     | . log creation = 0 s
[2026-03-24 00:29:28] 2026-03-23 23:27:50,055 | INFO     | ..............................
[2026-03-24 00:29:28] 2026-03-23 23:27:50,147 | INFO     | 
[2026-03-24 00:29:28] 2026-03-23 23:27:50,147 | INFO     | job summary report
[2026-03-24 00:29:28] 2026-03-23 23:27:50,147 | INFO     | --------------------------------------------------
[2026-03-24 00:29:28] 2026-03-23 23:27:50,147 | INFO     | PanDA job id: 7057350768
[2026-03-24 00:29:28] 2026-03-23 23:27:50,147 | INFO     | task id: 49179615
[2026-03-24 00:29:28] 2026-03-23 23:27:50,147 | INFO     | errors: (none)
[2026-03-24 00:29:28] 2026-03-23 23:27:50,147 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 00:29:28] 2026-03-23 23:27:50,148 | INFO     | pilot state: finished 
[2026-03-24 00:29:28] 2026-03-23 23:27:50,148 | INFO     | transexitcode: 0
[2026-03-24 00:29:28] 2026-03-23 23:27:50,148 | INFO     | exeerrorcode: 0
[2026-03-24 00:29:28] 2026-03-23 23:27:50,148 | INFO     | exeerrordiag: 
[2026-03-24 00:29:28] 2026-03-23 23:27:50,148 | INFO     | exitcode: 0
[2026-03-24 00:29:28] 2026-03-23 23:27:50,148 | INFO     | exitmsg: OK
[2026-03-24 00:29:28] 2026-03-23 23:27:50,148 | INFO     | cpuconsumptiontime: 103566 s
[2026-03-24 00:29:28] 2026-03-23 23:27:50,148 | INFO     | nevents: 400
[2026-03-24 00:29:28] 2026-03-23 23:27:50,148 | INFO     | neventsw: 0
[2026-03-24 00:29:28] 2026-03-23 23:27:50,148 | INFO     | pid: 1564357
[2026-03-24 00:29:28] 2026-03-23 23:27:50,148 | INFO     | pgrp: 1564357
[2026-03-24 00:29:28] 2026-03-23 23:27:50,148 | INFO     | corecount: 4
[2026-03-24 00:29:28] 2026-03-23 23:27:50,148 | INFO     | event service: False
[2026-03-24 00:29:28] 2026-03-23 23:27:50,149 | INFO     | sizes: {0: 2280045, 1: 2280279, 11: 2280279, 27118: 2317059, 27119: 2317058, 27120: 2326134, 27121: 2326318, 27122: 2326512}
[2026-03-24 00:29:28] 2026-03-23 23:27:50,149 | INFO     | --------------------------------------------------
[2026-03-24 00:29:28] 2026-03-23 23:27:50,149 | INFO     | 
[2026-03-24 00:29:28] 2026-03-23 23:27:50,149 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/0
[2026-03-24 00:29:28] 2026-03-23 23:27:50,170 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,170 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,170 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,170 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,170 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,170 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,171 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,171 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,171 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,171 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,171 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,171 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,171 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,171 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,171 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,171 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,171 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,172 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 00:29:28] 2026-03-23 23:27:50,172 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,172 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 00:29:28] 2026-03-23 23:27:50,172 | INFO     | job 7057350768 has completed (purged errors)
[2026-03-24 00:29:28] 2026-03-23 23:27:50,172 | INFO     | overall cleanup function is called
[2026-03-24 00:29:28] 2026-03-23 23:27:51,180 | INFO     | --- collectZombieJob: --- 10, [1564357]
[2026-03-24 00:29:28] 2026-03-23 23:27:51,181 | INFO     | zombie collector waiting for pid 1564357
[2026-03-24 00:29:28] 2026-03-23 23:27:51,181 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 00:29:28] 2026-03-23 23:27:51,181 | INFO     | collected zombie processes
[2026-03-24 00:29:28] 2026-03-23 23:27:51,181 | INFO     | will attempt to kill all subprocesses of pid=1564357
[2026-03-24 00:29:28] 2026-03-23 23:27:51,534 | INFO     | process IDs to be killed: [1564357] (in reverse order)
[2026-03-24 00:29:28] 2026-03-23 23:27:51,625 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 00:29:28] 2026-03-23 23:27:51,625 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 00:29:28] 2026-03-23 23:27:51,638 | INFO     | did not find any defunct processes belonging to 1564357
[2026-03-24 00:29:28] 2026-03-23 23:27:51,650 | INFO     | did not find any defunct processes belonging to 1564357
[2026-03-24 00:29:28] 2026-03-23 23:27:51,651 | INFO     | ready for new job
[2026-03-24 00:29:28] 2026-03-23 23:27:51,651 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 00:29:28] 2026-03-23 23:27:51,654 | INFO     | **************************************
[2026-03-24 00:29:28] 2026-03-23 23:27:51,654 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 00:29:28] 2026-03-23 23:27:51,654 | INFO     | **************************************
[2026-03-24 00:29:28] 2026-03-23 23:27:51,654 | INFO     | 
[2026-03-24 00:29:28] 2026-03-23 23:27:51,659 | INFO     | architecture information:
[2026-03-24 00:29:28] 2026-03-23 23:27:51,659 | INFO     | executing command: cat /etc/os-release
[2026-03-24 00:29:28] 2026-03-23 23:27:51,674 | INFO     | cat /etc/os-release:
[2026-03-24 00:29:28] NAME="CentOS Linux"
[2026-03-24 00:29:28] VERSION="7 (Core)"
[2026-03-24 00:29:28] ID="centos"
[2026-03-24 00:29:28] ID_LIKE="rhel fedora"
[2026-03-24 00:29:28] VERSION_ID="7"
[2026-03-24 00:29:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 00:29:28] ANSI_COLOR="0;31"
[2026-03-24 00:29:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 00:29:28] HOME_URL="https://www.centos.org/"
[2026-03-24 00:29:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 00:29:28] 
[2026-03-24 00:29:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 00:29:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 00:29:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 00:29:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 00:29:28] 
[2026-03-24 00:29:28] 2026-03-23 23:27:51,674 | INFO     | **************************************
[2026-03-24 00:29:28] 2026-03-23 23:27:52,178 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/0
[2026-03-24 00:29:28] 2026-03-23 23:27:52,194 | INFO     | sufficient remaining disk space (26079133696 B)
[2026-03-24 00:29:28] 2026-03-23 23:27:52,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 00:29:28] 2026-03-23 23:27:52,195 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 00:29:28] 2026-03-23 23:27:52,195 | INFO     | update_server=False
[2026-03-24 00:29:28] 2026-03-23 23:27:52,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 00:29:28] 2026-03-23 23:27:52,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 00:29:28] 2026-03-23 23:27:52,195 | INFO     | aborting loop
[2026-03-24 00:29:28] 2026-03-23 23:27:52,233 | INFO     | all payload control threads have been joined
[2026-03-24 00:29:28] 2026-03-23 23:27:52,337 | INFO     | all job control threads have been joined
[2026-03-24 00:29:28] 2026-03-23 23:27:53,033 | INFO     | all data control threads have been joined
[2026-03-24 00:29:28] 2026-03-23 23:27:53,200 | INFO     | [job] job monitor thread has finished
[2026-03-24 00:29:28] 2026-03-23 23:27:53,200 | INFO     | [job] retrieve thread has finished
[2026-03-24 00:29:28] 2026-03-23 23:27:53,218 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 00:29:28] 2026-03-23 23:27:53,235 | INFO     | [payload] control thread has finished
[2026-03-24 00:29:28] 2026-03-23 23:27:53,342 | INFO     | [job] control thread has finished
[2026-03-24 00:29:28] 2026-03-23 23:27:53,383 | INFO     | [job] validate thread has finished
[2026-03-24 00:29:28] 2026-03-23 23:27:53,524 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 00:29:28] 2026-03-23 23:27:53,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 00:29:28] 2026-03-23 23:27:54,010 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 00:29:28] 2026-03-23 23:27:54,010 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 00:29:28] 2026-03-23 23:27:54,039 | INFO     | [data] control thread has finished
[2026-03-24 00:29:28] 2026-03-23 23:27:54,253 | INFO     | [payload] validate_post thread has finished
[2026-03-24 00:29:28] 2026-03-23 23:27:54,356 | INFO     | [data] copytool_in thread has finished
[2026-03-24 00:29:28] 2026-03-23 23:27:54,543 | INFO     | [payload] failed_post thread has finished
[2026-03-24 00:29:28] 2026-03-23 23:27:55,153 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 00:29:28] 2026-03-23 23:27:55,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 00:29:28] 2026-03-23 23:27:55,609 | INFO     | [data] copytool_out thread has finished
[2026-03-24 00:29:28] 2026-03-23 23:27:56,159 | INFO     | [job] queue monitor thread has finished
[2026-03-24 00:29:28] 2026-03-23 23:27:59,492 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 00:29:28] 2026-03-23 23:28:22,089 | INFO     | [monitor] cgroup control has ended
[2026-03-24 00:29:28] 2026-03-23 23:28:22,406 | INFO     | PID=1559540 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-24 00:29:28] 2026-03-23 23:28:22,406 | INFO     | .. there are 11 such processes running
[2026-03-24 00:29:28] 2026-03-23 23:28:22,407 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 00:29:28] 2026-03-23 23:28:22,407 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 00:29:28] 2026-03-23 23:28:22,407 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 00:29:28] 2026-03-23 23:28:23,958 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22872097408832)>', '<ExcThread(monitor, started 22871851398912)>']
[2026-03-24 00:29:28] 2026-03-23 23:28:24,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 00:29:28] 2026-03-23 23:28:24,417 | INFO     | [monitor] control thread has ended
[2026-03-24 00:29:28] 2026-03-23 23:28:28,983 | INFO     | all workflow threads have been joined
[2026-03-24 00:29:28] 2026-03-23 23:28:28,983 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 00:29:28] 2026-03-23 23:28:28,983 | INFO     | traces error code: 0
[2026-03-24 00:29:28] 2026-03-23 23:28:28,984 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 00:29:28] 2026-03-23 23:28:29,147 [wrapper] ==== pilot stdout END ====
[2026-03-24 00:29:28] 2026-03-23 23:28:29,150 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 00:29:28] 2026-03-23 23:28:29,152 [wrapper] pilotpid: 1559540
[2026-03-24 00:29:28] 2026-03-23 23:28:29,155 [wrapper] Pilot exit status: 0
[2026-03-24 00:29:28] 2026-03-23 23:28:29,166 [wrapper] pandaids: 7057350768
[2026-03-24 00:29:28] 2026-03-23 23:28:29,251 [wrapper] cleanup supervisor_pilot 1965064 1559541
[2026-03-24 00:29:28] 2026-03-23 23:28:29,254 [wrapper] Test setup, not cleaning
[2026-03-24 00:29:28] 2026-03-23 23:28:29,257 [wrapper] apfmon messages muted
[2026-03-24 00:29:28] 2026-03-23 23:28:29,260 [wrapper] ==== wrapper stdout END ====
[2026-03-24 00:29:28] 2026-03-23 23:28:29,263 [wrapper] ==== wrapper stderr END ====
[2026-03-24 00:29:28]  *** Error codes and diagnostics ***
[2026-03-24 00:29:28]     "exeErrorCode": 0,
[2026-03-24 00:29:28]     "exeErrorDiag": "",
[2026-03-24 00:29:28]     "pilotErrorCode": 0,
[2026-03-24 00:29:28]     "pilotErrorDiag": "",
[2026-03-24 00:29:28]  *** Listing of results directory ***
[2026-03-24 00:29:28] total 485420
[2026-03-24 00:29:28] -rwx------. 1 boinc boinc     36322 Mar 17 19:31 runpilot2-wrapper.sh
[2026-03-24 00:29:28] -rw-r--r--. 1 boinc boinc      5111 Mar 17 19:33 queuedata.json
[2026-03-24 00:29:28] -rw-r--r--. 1 boinc boinc    585013 Mar 17 19:33 pilot3.tar.gz
[2026-03-24 00:29:28] -rw-r--r--. 1 boinc boinc       100 Mar 23 16:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 00:29:28] -rwxr-xr-x. 1 boinc boinc      7986 Mar 23 16:55 run_atlas
[2026-03-24 00:29:28] -rw-r--r--. 1 boinc boinc       105 Mar 23 16:55 job.xml
[2026-03-24 00:29:28] -rw-r--r--. 1 boinc boinc      6564 Mar 23 16:55 init_data.xml
[2026-03-24 00:29:28] -rw-r--r--. 2 boinc boinc 244846572 Mar 23 16:55 EVNT.49131861._000024.pool.root.1
[2026-03-24 00:29:28] -rw-r--r--. 2 boinc boinc    597534 Mar 23 16:55 input.tar.gz
[2026-03-24 00:29:28] -rw-r--r--. 2 boinc boinc     15845 Mar 23 16:55 start_atlas.sh
[2026-03-24 00:29:28] drwxrwx--x. 2 boinc boinc      4096 Mar 23 16:55 shared
[2026-03-24 00:29:28] -rw-r--r--. 1 boinc boinc         0 Mar 23 16:55 boinc_lockfile
[2026-03-24 00:29:28] -rw-r--r--. 1 boinc boinc      2606 Mar 23 16:55 pandaJob.out
[2026-03-24 00:29:28] -rw-------. 1 boinc boinc   1010850 Mar 23 16:55 agis_schedconf.cvmfs.json
[2026-03-24 00:29:28] -rw-------. 1 boinc boinc       452 Mar 23 16:55 workernode_map.json
[2026-03-24 00:29:28] drwx------. 5 boinc boinc      4096 Mar 23 16:55 pilot3
[2026-03-24 00:29:28] -rw-------. 1 boinc boinc 239552695 Mar 24 00:27 HITS.49179615._000592.pool.root.1
[2026-03-24 00:29:28] -rw-r--r--. 1 boinc boinc       531 Mar 24 00:27 boinc_task_state.xml
[2026-03-24 00:29:28] -rw-------. 1 boinc boinc        95 Mar 24 00:27 pilot_heartbeat.json
[2026-03-24 00:29:28] -rw-------. 1 boinc boinc      1033 Mar 24 00:27 memory_monitor_summary.json
[2026-03-24 00:29:28] -rw-------. 1 boinc boinc   1511579 Mar 24 00:27 agis_ddmendpoints.agis.ALL.json
[2026-03-24 00:29:28] -rw-------. 1 boinc boinc    584451 Mar 24 00:27 log.49179615._000592.job.log.tgz.1
[2026-03-24 00:29:28] -rw-------. 1 boinc boinc      6400 Mar 24 00:27 heartbeat.json
[2026-03-24 00:29:28] -rw-------. 1 boinc boinc      4829 Mar 24 00:28 pilotlog.txt
[2026-03-24 00:29:28] -rw-------. 1 boinc boinc   3784053 Mar 24 00:28 log.49179615._000592.job.log.1
[2026-03-24 00:29:28] -rw-------. 1 boinc boinc       357 Mar 24 00:28 output.list
[2026-03-24 00:29:28] -rw-r--r--. 1 boinc boinc       620 Mar 24 00:28 runtime_log
[2026-03-24 00:29:28] -rw-------. 1 boinc boinc   4382720 Mar 24 00:28 result.tar.gz
[2026-03-24 00:29:28] -rw-------. 1 boinc boinc       667 Mar 24 00:28 xOrLDmfNoM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmrqxLDmdlwT7m.diag
[2026-03-24 00:29:28] -rw-r--r--. 1 boinc boinc      9205 Mar 24 00:28 runtime_log.err
[2026-03-24 00:29:28] -rw-r--r--. 1 boinc boinc        28 Mar 24 00:29 wrapper_checkpoint.txt
[2026-03-24 00:29:28] -rw-r--r--. 1 boinc boinc      8192 Mar 24 00:29 boinc_mmap_file
[2026-03-24 00:29:28] -rw-r--r--. 1 boinc boinc     20918 Mar 24 00:29 stderr.txt
[2026-03-24 00:29:28] HITS file was successfully produced:
[2026-03-24 00:29:28] -rw-------. 1 boinc boinc 239552695 Mar 24 00:27 shared/HITS.pool.root.1
[2026-03-24 00:29:28]  *** Contents of shared directory: ***
[2026-03-24 00:29:28] total 477936
[2026-03-24 00:29:28] -rw-r--r--. 2 boinc boinc 244846572 Mar 23 16:55 ATLAS.root_0
[2026-03-24 00:29:28] -rw-r--r--. 2 boinc boinc    597534 Mar 23 16:55 input.tar.gz
[2026-03-24 00:29:28] -rw-r--r--. 2 boinc boinc     15845 Mar 23 16:55 start_atlas.sh
[2026-03-24 00:29:28] -rw-------. 1 boinc boinc 239552695 Mar 24 00:27 HITS.pool.root.1
[2026-03-24 00:29:28] -rw-------. 1 boinc boinc   4382720 Mar 24 00:28 result.tar.gz
00:29:30 (1555760): run_atlas exited; CPU time 104768.982129
00:29:30 (1555760): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN