Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:00:37 (2829513): wrapper (7.7.26015): starting
02:00:37 (2829513): wrapper: running run_atlas (--nthreads 3)
[2026-03-19 02:00:37] Arguments: --nthreads 3
[2026-03-19 02:00:37] Threads: 3
[2026-03-19 02:00:37] Checking for CVMFS
[2026-03-19 02:00:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 02:00:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 02:00:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 02:00:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 02:00:38] 2.9.2.0 2580369 3324 66732 157435 2 50 23072196 36864000 0 130560 0 761039 99.970 120508 13342 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-19 02:00:38] CVMFS is ok
[2026-03-19 02:00:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 02:00:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 02:00:38] Further information can be found at the LHC@home message board.
[2026-03-19 02:00:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 02:00:38] Checking for apptainer binary...
[2026-03-19 02:00:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 02:00:38] Running /usr/bin/apptainer --version
[2026-03-19 02:00:38] apptainer version 1.4.1-1.1
[2026-03-19 02:00:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 02:00:39] thA335
[2026-03-19 02:00:39] apptainer works
[2026-03-19 02:00:40] Set ATHENA_PROC_NUMBER=3
[2026-03-19 02:00:40] Set ATHENA_CORE_NUMBER=3
[2026-03-19 02:00:40] Starting ATLAS job with PandaID=7041367962
[2026-03-19 02:00:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 03:28:09]  *** The last 200 lines of the pilot log: ***
[2026-03-19 03:28:09] 2026-03-19 02:27:20,014 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 03:28:09] 2026-03-19 02:27:20,014 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 03:28:09] 2026-03-19 02:27:20,014 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 03:28:09] 2026-03-19 02:27:20,396 | INFO     | all job control threads have been joined
[2026-03-19 03:28:09] 2026-03-19 02:27:20,408 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-19 03:28:09] 2026-03-19 02:27:20,408 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-19 03:28:09] 2026-03-19 02:27:20,409 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 03:28:09] 2026-03-19 02:27:20,409 | INFO     | will abort loop
[2026-03-19 03:28:09] 2026-03-19 02:27:20,659 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 03:28:09] 2026-03-19 02:27:20,986 | INFO     | all data control threads have been joined
[2026-03-19 03:28:09] 2026-03-19 02:27:21,020 | INFO     | [job] retrieve thread has finished
[2026-03-19 03:28:09] 2026-03-19 02:27:21,021 | INFO     | [job] queue monitor thread has finished
[2026-03-19 03:28:09] 2026-03-19 02:27:21,105 | INFO     | all payload control threads have been joined
[2026-03-19 03:28:09] 2026-03-19 02:27:21,201 | INFO     | [data] copytool_in thread has finished
[2026-03-19 03:28:09] 2026-03-19 02:27:21,403 | INFO     | [job] control thread has finished
[2026-03-19 03:28:09] 2026-03-19 02:27:21,415 | INFO     | [job] job monitor thread has finished
[2026-03-19 03:28:09] 2026-03-19 02:27:21,815 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 03:28:09] 2026-03-19 02:27:21,992 | INFO     | [data] control thread has finished
[2026-03-19 03:28:09] 2026-03-19 02:27:22,111 | INFO     | [payload] control thread has finished
[2026-03-19 03:28:09] 2026-03-19 02:27:22,195 | INFO     | [job] validate thread has finished
[2026-03-19 03:28:09] 2026-03-19 02:27:22,243 | INFO     | [payload] validate_post thread has finished
[2026-03-19 03:28:09] 2026-03-19 02:27:22,266 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 03:28:09] 2026-03-19 02:27:22,360 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 03:28:09] 2026-03-19 02:27:22,373 | INFO     | [payload] failed_post thread has finished
[2026-03-19 03:28:09] 2026-03-19 02:27:22,662 | INFO     | [data] copytool_out thread has finished
[2026-03-19 03:28:09] 2026-03-19 02:27:24,021 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 03:28:09] 2026-03-19 02:27:30,873 | INFO     | job.realtimelogging is not enabled
[2026-03-19 03:28:09] 2026-03-19 02:27:31,879 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 03:28:09] 2026-03-19 02:27:50,283 | INFO     | PID=2833552 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 03:28:09] 2026-03-19 02:27:50,283 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 03:28:09] 2026-03-19 02:27:50,283 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 03:28:09] 2026-03-19 02:27:50,283 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 03:28:09] 2026-03-19 02:28:04,129 | INFO     | [monitor] cgroup control has ended
[2026-03-19 03:28:09] 2026-03-19 02:28:04,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157271164736)>', '<ExcThread(monitor, started 140156644349696)>']
[2026-03-19 03:28:09] 2026-03-19 02:28:04,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 03:28:09] 2026-03-19 02:28:04,355 | INFO     | [monitor] control thread has ended
[2026-03-19 03:28:09] 2026-03-19 02:28:09,329 | INFO     | all workflow threads have been joined
[2026-03-19 03:28:09] 2026-03-19 02:28:09,330 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 03:28:09] 2026-03-19 02:28:09,330 | INFO     | traces error code: 0
[2026-03-19 03:28:09] 2026-03-19 02:28:09,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 03:28:09] 2026-03-19 02:28:09,379 [wrapper] ==== pilot stdout END ====
[2026-03-19 03:28:09] 2026-03-19 02:28:09,383 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 03:28:09] 2026-03-19 02:28:09,386 [wrapper] pilotpid: 2833552
[2026-03-19 03:28:09] 2026-03-19 02:28:09,388 [wrapper] Pilot exit status: 0
[2026-03-19 03:28:09] 2026-03-19 02:28:09,396 [wrapper] pandaids: 7041367962
[2026-03-19 03:28:09] 2026-03-19 02:28:09,414 [wrapper] cleanup supervisor_pilot 2843541 2833553
[2026-03-19 03:28:09] 2026-03-19 02:28:09,417 [wrapper] Test setup, not cleaning
[2026-03-19 03:28:09] 2026-03-19 02:28:09,420 [wrapper] apfmon messages muted
[2026-03-19 03:28:09] 2026-03-19 02:28:09,422 [wrapper] ==== wrapper stdout END ====
[2026-03-19 03:28:09] 2026-03-19 02:28:09,425 [wrapper] ==== wrapper stderr END ====
[2026-03-19 03:28:09]  *** Error codes and diagnostics ***
[2026-03-19 03:28:09]     "exeErrorCode": 0,
[2026-03-19 03:28:09]     "exeErrorDiag": "",
[2026-03-19 03:28:09]     "pilotErrorCode": 0,
[2026-03-19 03:28:09]     "pilotErrorDiag": "",
[2026-03-19 03:28:09]  *** Listing of results directory ***
[2026-03-19 03:28:09] total 606788
[2026-03-19 03:28:09] -rw-r--r-- 1 boinc boinc    584627 Mar 10 00:46 pilot3.tar.gz
[2026-03-19 03:28:09] -rwx------ 1 boinc boinc     36322 Mar 10 00:46 runpilot2-wrapper.sh
[2026-03-19 03:28:09] -rw-r--r-- 1 boinc boinc      5111 Mar 10 00:46 queuedata.json
[2026-03-19 03:28:09] -rw-r--r-- 1 boinc boinc       100 Mar 19 02:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 03:28:09] -rwxr-xr-x 1 boinc boinc      7986 Mar 19 02:00 run_atlas
[2026-03-19 03:28:09] -rw-r--r-- 1 boinc boinc       105 Mar 19 02:00 job.xml
[2026-03-19 03:28:09] -rw-r--r-- 2 boinc boinc 434949801 Mar 19 02:00 EVNT.46701403._001420.pool.root.1
[2026-03-19 03:28:09] -rw-r--r-- 2 boinc boinc    597956 Mar 19 02:00 input.tar.gz
[2026-03-19 03:28:09] -rw-r--r-- 2 boinc boinc     15845 Mar 19 02:00 start_atlas.sh
[2026-03-19 03:28:09] drwxrwx--x 2 boinc boinc      4096 Mar 19 02:00 shared
[2026-03-19 03:28:09] -rw-r--r-- 1 boinc boinc         0 Mar 19 02:00 boinc_setup_complete
[2026-03-19 03:28:09] -rw-r--r-- 1 boinc boinc      6195 Mar 19 02:00 init_data.xml
[2026-03-19 03:28:09] -rw-r--r-- 1 boinc boinc         0 Mar 19 02:00 boinc_lockfile
[2026-03-19 03:28:09] -rw-r--r-- 1 boinc boinc      2563 Mar 19 02:00 pandaJob.out
[2026-03-19 03:28:09] -rw------- 1 boinc boinc   1010422 Mar 19 02:00 agis_schedconf.cvmfs.json
[2026-03-19 03:28:09] -rw------- 1 boinc boinc   1511579 Mar 19 02:00 agis_ddmendpoints.agis.ALL.json
[2026-03-19 03:28:09] -rw------- 1 boinc boinc       425 Mar 19 02:00 workernode_map.json
[2026-03-19 03:28:09] drwx------ 5 boinc boinc      4096 Mar 19 02:00 pilot3
[2026-03-19 03:28:09] -rw------- 1 boinc boinc 180381787 Mar 19 03:26 HITS.48955010._021113.pool.root.1
[2026-03-19 03:28:09] -rw-r--r-- 1 boinc boinc       530 Mar 19 03:27 boinc_task_state.xml
[2026-03-19 03:28:09] -rw------- 1 boinc boinc      1011 Mar 19 03:27 memory_monitor_summary.json
[2026-03-19 03:28:09] -rw------- 1 boinc boinc    293727 Mar 19 03:27 log.48955010._021113.job.log.tgz.1
[2026-03-19 03:28:09] -rw------- 1 boinc boinc        95 Mar 19 03:27 pilot_heartbeat.json
[2026-03-19 03:28:09] -rw------- 1 boinc boinc      6299 Mar 19 03:27 heartbeat.json
[2026-03-19 03:28:09] -rw-r--r-- 1 boinc boinc        27 Mar 19 03:27 wrapper_checkpoint.txt
[2026-03-19 03:28:09] -rw-r--r-- 1 boinc boinc      8192 Mar 19 03:27 boinc_mmap_file
[2026-03-19 03:28:09] -rw------- 1 boinc boinc      5006 Mar 19 03:28 pilotlog.txt
[2026-03-19 03:28:09] -rw------- 1 boinc boinc    756878 Mar 19 03:28 log.48955010._021113.job.log.1
[2026-03-19 03:28:09] -rw------- 1 boinc boinc       357 Mar 19 03:28 output.list
[2026-03-19 03:28:09] -rw-r--r-- 1 boinc boinc       620 Mar 19 03:28 runtime_log
[2026-03-19 03:28:09] -rw------- 1 boinc boinc   1064960 Mar 19 03:28 result.tar.gz
[2026-03-19 03:28:09] -rw-r--r-- 1 boinc boinc      8896 Mar 19 03:28 runtime_log.err
[2026-03-19 03:28:09] -rw------- 1 boinc boinc       657 Mar 19 03:28 qZ2MDmDUzJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmCTbLDmIHJ1Xn.diag
[2026-03-19 03:28:09] -rw-r--r-- 1 boinc boinc      7660 Mar 19 03:28 stderr.txt
[2026-03-19 03:28:09] HITS file was successfully produced:
[2026-03-19 03:28:09] -rw------- 1 boinc boinc 180381787 Mar 19 03:26 shared/HITS.pool.root.1
[2026-03-19 03:28:09]  *** Contents of shared directory: ***
[2026-03-19 03:28:09] total 602560
[2026-03-19 03:28:09] -rw-r--r-- 2 boinc boinc 434949801 Mar 19 02:00 ATLAS.root_0
[2026-03-19 03:28:09] -rw-r--r-- 2 boinc boinc    597956 Mar 19 02:00 input.tar.gz
[2026-03-19 03:28:09] -rw-r--r-- 2 boinc boinc     15845 Mar 19 02:00 start_atlas.sh
[2026-03-19 03:28:09] -rw------- 1 boinc boinc 180381787 Mar 19 03:26 HITS.pool.root.1
[2026-03-19 03:28:09] -rw------- 1 boinc boinc   1064960 Mar 19 03:28 result.tar.gz
03:28:11 (2829513): run_atlas exited; CPU time 14438.768286
03:28:11 (2829513): called boinc_finish(0)

</stderr_txt>
]]>

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