Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:30:37 (3339133): wrapper (7.7.26015): starting
23:30:37 (3339133): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 23:30:37] Arguments: --nthreads 8
[2026-03-17 23:30:37] Threads: 8
[2026-03-17 23:30:37] Checking for CVMFS
[2026-03-17 23:30:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 23:30:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 23:30:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 23:30:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 23:30:39] 2.13.3.0 15551 189091 358700 157400 3 381 29592258 32935937 13560 16776704 0 425340177 99.476 636579572 39419 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-17 23:30:39] CVMFS is ok
[2026-03-17 23:30:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 23:30:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 23:30:39] Further information can be found at the LHC@home message board.
[2026-03-17 23:30:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 23:30:39] Checking for apptainer binary...
[2026-03-17 23:30:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 23:30:39] Running /usr/bin/apptainer --version
[2026-03-17 23:30:40] apptainer version 1.4.5-2.el9
[2026-03-17 23:30:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 23:30:40] c6-5-7-3.aglt2.org
[2026-03-17 23:30:40] apptainer works
[2026-03-17 23:30:40] Set ATHENA_PROC_NUMBER=8
[2026-03-17 23:30:40] Set ATHENA_CORE_NUMBER=8
[2026-03-17 23:30:41] Starting ATLAS job with PandaID=7047786596
[2026-03-17 23:30:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 11:50:20]  *** The last 200 lines of the pilot log: ***
[2026-03-18 11:50:20] 2026-03-18 15:49:09,435 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 11:50:20] 2026-03-18 15:49:09,435 | INFO     | log transfer has been attempted: DONE
[2026-03-18 11:50:20] 2026-03-18 15:49:09,435 | INFO     | job 7047786596 has finished - writing final server update
[2026-03-18 11:50:20] 2026-03-18 15:49:09,435 | INFO     | total number of processed events: 400 (read)
[2026-03-18 11:50:20] 2026-03-18 15:49:09,479 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7047786596/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 11:50:20] 2026-03-18 15:49:09,516 | INFO     | extracted standard info from prmon json
[2026-03-18 11:50:20] 2026-03-18 15:49:09,516 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 11:50:20] 2026-03-18 15:49:09,516 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 11:50:20] 2026-03-18 15:49:09,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 11:50:20] 2026-03-18 15:49:09,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 11:50:20] 2026-03-18 15:49:09,635 | INFO     | fitting pss+swap vs Time
[2026-03-18 11:50:20] 2026-03-18 15:49:09,636 | INFO     | sum of square deviations: 117676923851.39603
[2026-03-18 11:50:20] 2026-03-18 15:49:09,700 | INFO     | sum of deviations: 546072033879.713
[2026-03-18 11:50:20] 2026-03-18 15:49:09,701 | INFO     | mean x: 1773826833.2279005
[2026-03-18 11:50:20] 2026-03-18 15:49:09,701 | INFO     | mean y: 2509296.232044199
[2026-03-18 11:50:20] 2026-03-18 15:49:09,701 | INFO     | intersect: -8228817584.76612
[2026-03-18 11:50:20] 2026-03-18 15:49:09,702 | INFO     | chi2: 7.532212134583259
[2026-03-18 11:50:20] 2026-03-18 15:49:09,703 | INFO     | sum of square deviations: 115255811278.72888
[2026-03-18 11:50:20] 2026-03-18 15:49:09,732 | INFO     | sum of deviations: 736590472864.734
[2026-03-18 11:50:20] 2026-03-18 15:49:09,732 | INFO     | mean x: 1773826680.7329624
[2026-03-18 11:50:20] 2026-03-18 15:49:09,732 | INFO     | mean y: 2521279.9986091796
[2026-03-18 11:50:20] 2026-03-18 15:49:09,733 | INFO     | intersect: -11333860105.417154
[2026-03-18 11:50:20] 2026-03-18 15:49:09,733 | INFO     | chi2: 4.492085874736808
[2026-03-18 11:50:20] 2026-03-18 15:49:09,733 | INFO     | current chi2=4.492085874736808 (change=40.36166541152063 %)
[2026-03-18 11:50:20] 2026-03-18 15:49:09,742 | INFO     | sum of square deviations: 112868141193.52377
[2026-03-18 11:50:20] 2026-03-18 15:49:09,769 | INFO     | sum of deviations: 729695661984.9049
[2026-03-18 11:50:20] 2026-03-18 15:49:09,769 | INFO     | mean x: 1773826528.2380953
[2026-03-18 11:50:20] 2026-03-18 15:49:09,770 | INFO     | mean y: 2520839.6358543416
[2026-03-18 11:50:20] 2026-03-18 15:49:09,770 | INFO     | intersect: -11465316843.185406
[2026-03-18 11:50:20] 2026-03-18 15:49:09,770 | INFO     | chi2: 4.490580894517759
[2026-03-18 11:50:20] 2026-03-18 15:49:09,770 | INFO     | current chi2=4.490580894517759 (change=0.03350292628003122 %)
[2026-03-18 11:50:20] 2026-03-18 15:49:09,771 | INFO     | right removable region: 713
[2026-03-18 11:50:20] 2026-03-18 15:49:09,771 | INFO     | sum of square deviations: 115255533729.19302
[2026-03-18 11:50:20] 2026-03-18 15:49:09,803 | INFO     | sum of deviations: 343297162417.8688
[2026-03-18 11:50:20] 2026-03-18 15:49:09,803 | INFO     | mean x: 1773826985.7315717
[2026-03-18 11:50:20] 2026-03-18 15:49:09,803 | INFO     | mean y: 2522058.159944367
[2026-03-18 11:50:20] 2026-03-18 15:49:09,803 | INFO     | intersect: -5280953286.743598
[2026-03-18 11:50:20] 2026-03-18 15:49:09,804 | INFO     | chi2: 4.757515114728781
[2026-03-18 11:50:20] 2026-03-18 15:49:09,804 | INFO     | current chi2=4.757515114728781 (change=36.83774394928132 %)
[2026-03-18 11:50:20] 2026-03-18 15:49:09,814 | INFO     | sum of square deviations: 112867586216.47073
[2026-03-18 11:50:20] 2026-03-18 15:49:09,831 | INFO     | sum of deviations: 211567755836.47095
[2026-03-18 11:50:20] 2026-03-18 15:49:09,831 | INFO     | mean x: 1773827138.235294
[2026-03-18 11:50:20] 2026-03-18 15:49:09,831 | INFO     | mean y: 2530461.663865546
[2026-03-18 11:50:20] 2026-03-18 15:49:09,831 | INFO     | intersect: -3322468676.339367
[2026-03-18 11:50:20] 2026-03-18 15:49:09,837 | INFO     | chi2: 3.5928196181457834
[2026-03-18 11:50:20] 2026-03-18 15:49:09,837 | INFO     | current chi2=3.5928196181457834 (change=24.48117280756963 %)
[2026-03-18 11:50:20] 2026-03-18 15:49:09,837 | INFO     | left removable region: 20
[2026-03-18 11:50:20] 2026-03-18 15:49:09,838 | INFO     | sum of square deviations: 103198672289.27274
[2026-03-18 11:50:20] 2026-03-18 15:49:09,859 | INFO     | sum of deviations: 279949933808.02997
[2026-03-18 11:50:20] 2026-03-18 15:49:09,859 | INFO     | mean x: 1773827107.7575758
[2026-03-18 11:50:20] 2026-03-18 15:49:09,859 | INFO     | mean y: 2550232.518037518
[2026-03-18 11:50:20] 2026-03-18 15:49:09,859 | INFO     | intersect: -4809360331.715464
[2026-03-18 11:50:20] 2026-03-18 15:49:09,868 | INFO     | chi2: 0.10552247554932542
[2026-03-18 11:50:20] 2026-03-18 15:49:09,868 | INFO     | current memory leak: 2.71 B/s (using 693 data points, chi2=0.11)
[2026-03-18 11:50:20] 2026-03-18 15:49:09,870 | INFO     | could have reported an average CPU frequency of 2972 MHz (28 samples)
[2026-03-18 11:50:20] 2026-03-18 15:49:09,870 | INFO     | ..............................
[2026-03-18 11:50:20] 2026-03-18 15:49:09,870 | INFO     | . Timing measurements:
[2026-03-18 11:50:20] 2026-03-18 15:49:09,870 | INFO     | . get job = 0 s
[2026-03-18 11:50:20] 2026-03-18 15:49:09,870 | INFO     | . initial setup = 30 s
[2026-03-18 11:50:20] 2026-03-18 15:49:09,870 | INFO     | . payload setup = 43 s
[2026-03-18 11:50:20] 2026-03-18 15:49:09,870 | INFO     | . stage-in = 0 s
[2026-03-18 11:50:20] 2026-03-18 15:49:09,870 | INFO     | . payload execution = 44182 s
[2026-03-18 11:50:20] 2026-03-18 15:49:09,870 | INFO     | . stage-out = 7 s
[2026-03-18 11:50:20] 2026-03-18 15:49:09,870 | INFO     | . log creation = 2 s
[2026-03-18 11:50:20] 2026-03-18 15:49:09,870 | INFO     | ..............................
[2026-03-18 11:50:20] 2026-03-18 15:49:10,169 | INFO     | 
[2026-03-18 11:50:20] 2026-03-18 15:49:10,169 | INFO     | job summary report
[2026-03-18 11:50:20] 2026-03-18 15:49:10,169 | INFO     | --------------------------------------------------
[2026-03-18 11:50:20] 2026-03-18 15:49:10,169 | INFO     | PanDA job id: 7047786596
[2026-03-18 11:50:20] 2026-03-18 15:49:10,169 | INFO     | task id: 48998032
[2026-03-18 11:50:20] 2026-03-18 15:49:10,169 | INFO     | errors: (none)
[2026-03-18 11:50:20] 2026-03-18 15:49:10,169 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 11:50:20] 2026-03-18 15:49:10,169 | INFO     | pilot state: finished 
[2026-03-18 11:50:20] 2026-03-18 15:49:10,169 | INFO     | transexitcode: 0
[2026-03-18 11:50:20] 2026-03-18 15:49:10,170 | INFO     | exeerrorcode: 0
[2026-03-18 11:50:20] 2026-03-18 15:49:10,170 | INFO     | exeerrordiag: 
[2026-03-18 11:50:20] 2026-03-18 15:49:10,170 | INFO     | exitcode: 0
[2026-03-18 11:50:20] 2026-03-18 15:49:10,172 | INFO     | exitmsg: OK
[2026-03-18 11:50:20] 2026-03-18 15:49:10,172 | INFO     | cpuconsumptiontime: 58348 s
[2026-03-18 11:50:20] 2026-03-18 15:49:10,172 | INFO     | nevents: 400
[2026-03-18 11:50:20] 2026-03-18 15:49:10,172 | INFO     | neventsw: 0
[2026-03-18 11:50:20] 2026-03-18 15:49:10,172 | INFO     | pid: 3350298
[2026-03-18 11:50:20] 2026-03-18 15:49:10,172 | INFO     | pgrp: 3350298
[2026-03-18 11:50:20] 2026-03-18 15:49:10,172 | INFO     | corecount: 8
[2026-03-18 11:50:20] 2026-03-18 15:49:10,172 | INFO     | event service: False
[2026-03-18 11:50:20] 2026-03-18 15:49:10,173 | INFO     | sizes: {0: 2279142, 1: 2279827, 2: 2280288, 44230: 2324606, 44238: 2333660, 44240: 2333798}
[2026-03-18 11:50:20] 2026-03-18 15:49:10,173 | INFO     | --------------------------------------------------
[2026-03-18 11:50:20] 2026-03-18 15:49:10,173 | INFO     | 
[2026-03-18 11:50:20] 2026-03-18 15:49:10,173 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-18 11:50:20] 2026-03-18 15:49:10,221 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,222 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,222 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,222 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,222 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,222 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,222 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,222 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,222 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,222 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,222 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,223 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,223 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,223 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 11:50:20] 2026-03-18 15:49:10,223 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,223 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 11:50:20] 2026-03-18 15:49:10,223 | INFO     | job 7047786596 has completed (purged errors)
[2026-03-18 11:50:20] 2026-03-18 15:49:10,223 | INFO     | overall cleanup function is called
[2026-03-18 11:50:20] 2026-03-18 15:49:11,240 | INFO     | --- collectZombieJob: --- 10, [3350298]
[2026-03-18 11:50:20] 2026-03-18 15:49:11,240 | INFO     | zombie collector waiting for pid 3350298
[2026-03-18 11:50:20] 2026-03-18 15:49:11,240 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 11:50:20] 2026-03-18 15:49:11,240 | INFO     | collected zombie processes
[2026-03-18 11:50:20] 2026-03-18 15:49:11,240 | INFO     | will attempt to kill all subprocesses of pid=3350298
[2026-03-18 11:50:20] 2026-03-18 15:49:13,582 | INFO     | process IDs to be killed: [3350298] (in reverse order)
[2026-03-18 11:50:20] 2026-03-18 15:49:14,094 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 11:50:20] 2026-03-18 15:49:14,094 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 11:50:20] 2026-03-18 15:49:14,142 | INFO     | did not find any defunct processes belonging to 3350298
[2026-03-18 11:50:20] 2026-03-18 15:49:14,163 | INFO     | did not find any defunct processes belonging to 3350298
[2026-03-18 11:50:20] 2026-03-18 15:49:14,163 | INFO     | ready for new job
[2026-03-18 11:50:20] 2026-03-18 15:49:14,164 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 11:50:20] 2026-03-18 15:49:14,171 | INFO     | **************************************
[2026-03-18 11:50:20] 2026-03-18 15:49:14,171 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-18 11:50:20] 2026-03-18 15:49:14,171 | INFO     | **************************************
[2026-03-18 11:50:20] 2026-03-18 15:49:14,171 | INFO     | 
[2026-03-18 11:50:20] 2026-03-18 15:49:14,186 | INFO     | architecture information:
[2026-03-18 11:50:20] 2026-03-18 15:49:14,187 | INFO     | executing command: cat /etc/os-release
[2026-03-18 11:50:20] 2026-03-18 15:49:14,320 | INFO     | cat /etc/os-release:
[2026-03-18 11:50:20] NAME="CentOS Linux"
[2026-03-18 11:50:20] VERSION="7 (Core)"
[2026-03-18 11:50:20] ID="centos"
[2026-03-18 11:50:20] ID_LIKE="rhel fedora"
[2026-03-18 11:50:20] VERSION_ID="7"
[2026-03-18 11:50:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 11:50:20] ANSI_COLOR="0;31"
[2026-03-18 11:50:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 11:50:20] HOME_URL="https://www.centos.org/"
[2026-03-18 11:50:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 11:50:20] 
[2026-03-18 11:50:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 11:50:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 11:50:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 11:50:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 11:50:20] 
[2026-03-18 11:50:20] 2026-03-18 15:49:14,320 | INFO     | **************************************
[2026-03-18 11:50:20] 2026-03-18 15:49:14,824 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-18 11:50:20] 2026-03-18 15:49:14,956 | INFO     | sufficient remaining disk space (73288122368 B)
[2026-03-18 11:50:20] 2026-03-18 15:49:14,957 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 11:50:20] 2026-03-18 15:49:14,957 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 11:50:20] 2026-03-18 15:49:14,957 | INFO     | update_server=False
[2026-03-18 11:50:20] 2026-03-18 15:49:14,957 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 11:50:20] 2026-03-18 15:49:14,958 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 11:50:20] 2026-03-18 15:49:14,958 | INFO     | aborting loop
[2026-03-18 11:50:20] 2026-03-18 15:49:14,959 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 11:50:20] 2026-03-18 15:49:15,210 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 11:50:20] 2026-03-18 15:49:15,685 | INFO     | all payload control threads have been joined
[2026-03-18 11:50:20] 2026-03-18 15:49:15,685 | INFO     | all data control threads have been joined
[2026-03-18 11:50:20] 2026-03-18 15:49:15,963 | INFO     | [job] retrieve thread has finished
[2026-03-18 11:50:20] 2026-03-18 15:49:15,964 | INFO     | [job] job monitor thread has finished
[2026-03-18 11:50:20] 2026-03-18 15:49:16,050 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 11:50:20] 2026-03-18 15:49:16,172 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 11:50:20] 2026-03-18 15:49:16,221 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 11:50:20] 2026-03-18 15:49:16,221 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 11:50:20] 2026-03-18 15:49:16,232 | INFO     | [job] queue monitor thread has finished
[2026-03-18 11:50:20] 2026-03-18 15:49:16,418 | INFO     | all job control threads have been joined
[2026-03-18 11:50:20] 2026-03-18 15:49:16,691 | INFO     | [payload] control thread has finished
[2026-03-18 11:50:20] 2026-03-18 15:49:16,691 | INFO     | [data] control thread has finished
[2026-03-18 11:50:20] 2026-03-18 15:49:16,705 | INFO     | [payload] validate_post thread has finished
[2026-03-18 11:50:20] 2026-03-18 15:49:16,717 | INFO     | [payload] failed_post thread has finished
[2026-03-18 11:50:20] 2026-03-18 15:49:17,056 | INFO     | [data] copytool_in thread has finished
[2026-03-18 11:50:20] 2026-03-18 15:49:17,056 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 11:50:20] 2026-03-18 15:49:17,057 | INFO     | [job] validate thread has finished
[2026-03-18 11:50:20] 2026-03-18 15:49:17,425 | INFO     | [job] control thread has finished
[2026-03-18 11:50:20] 2026-03-18 15:49:18,180 | INFO     | [data] copytool_out thread has finished
[2026-03-18 11:50:20] 2026-03-18 15:49:19,041 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 11:50:20] 2026-03-18 15:49:43,532 | INFO     | PID=3343748 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 11:50:20] 2026-03-18 15:49:43,533 | INFO     | .. there are 18 such processes running
[2026-03-18 11:50:20] 2026-03-18 15:49:43,533 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 11:50:20] 2026-03-18 15:49:43,533 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 11:50:20] 2026-03-18 15:49:43,533 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 11:50:20] 2026-03-18 15:50:11,299 | INFO     | [monitor] cgroup control has ended
[2026-03-18 11:50:20] 2026-03-18 15:50:12,819 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140239173244736)>', '<ExcThread(monitor, started 140238433269504)>']
[2026-03-18 11:50:20] 2026-03-18 15:50:12,827 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 11:50:20] 2026-03-18 15:50:12,827 | INFO     | [monitor] control thread has ended
[2026-03-18 11:50:20] 2026-03-18 15:50:17,857 | INFO     | all workflow threads have been joined
[2026-03-18 11:50:20] 2026-03-18 15:50:17,858 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 11:50:20] 2026-03-18 15:50:17,858 | INFO     | traces error code: 0
[2026-03-18 11:50:20] 2026-03-18 15:50:17,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 11:50:20] 2026-03-18 15:50:18,774 [wrapper] ==== pilot stdout END ====
[2026-03-18 11:50:20] 2026-03-18 15:50:18,811 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 11:50:20] 2026-03-18 15:50:18,877 [wrapper] pilotpid: 3343748
[2026-03-18 11:50:20] 2026-03-18 15:50:18,923 [wrapper] Pilot exit status: 0
[2026-03-18 11:50:20] 2026-03-18 15:50:19,022 [wrapper] pandaids: 7047786596
[2026-03-18 11:50:20] 2026-03-18 15:50:19,718 [wrapper] cleanup supervisor_pilot  884035 3343749
[2026-03-18 11:50:20] 2026-03-18 15:50:19,763 [wrapper] Test setup, not cleaning
[2026-03-18 11:50:20] 2026-03-18 15:50:19,781 [wrapper] apfmon messages muted
[2026-03-18 11:50:20] 2026-03-18 15:50:19,819 [wrapper] ==== wrapper stdout END ====
[2026-03-18 11:50:20] 2026-03-18 15:50:19,832 [wrapper] ==== wrapper stderr END ====
[2026-03-18 11:50:20]  *** Error codes and diagnostics ***
[2026-03-18 11:50:20]     "exeErrorCode": 0,
[2026-03-18 11:50:20]     "exeErrorDiag": "",
[2026-03-18 11:50:20]     "pilotErrorCode": 0,
[2026-03-18 11:50:20]     "pilotErrorDiag": "",
[2026-03-18 11:50:20]  *** Listing of results directory ***
[2026-03-18 11:50:20] total 657336
[2026-03-18 11:50:20] -rwx------. 1 boincer umatlas     36322 Mar  9 18:47 runpilot2-wrapper.sh
[2026-03-18 11:50:20] -rw-r--r--. 1 boincer umatlas    584627 Mar  9 18:47 pilot3.tar.gz
[2026-03-18 11:50:20] -rw-r--r--. 1 boincer umatlas      5111 Mar  9 18:47 queuedata.json
[2026-03-18 11:50:20] -rw-r--r--. 1 boincer umatlas       100 Mar 17 23:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 11:50:20] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 17 23:30 run_atlas
[2026-03-18 11:50:20] -rw-r--r--. 1 boincer umatlas       105 Mar 17 23:30 job.xml
[2026-03-18 11:50:20] -rw-r--r--. 2 boincer umatlas 360201407 Mar 17 23:30 EVNT.48998030._000119.pool.root.1
[2026-03-18 11:50:20] -rw-r--r--. 2 boincer umatlas    597941 Mar 17 23:30 input.tar.gz
[2026-03-18 11:50:20] -rw-r--r--. 2 boincer umatlas     15845 Mar 17 23:30 start_atlas.sh
[2026-03-18 11:50:20] drwxrwx--x. 2 boincer umatlas      4096 Mar 17 23:30 shared
[2026-03-18 11:50:20] -rw-r--r--. 1 boincer umatlas         0 Mar 17 23:30 boinc_lockfile
[2026-03-18 11:50:20] -rw-r--r--. 1 boincer umatlas      2560 Mar 17 23:30 pandaJob.out
[2026-03-18 11:50:20] -rw-------. 1 boincer umatlas        57 Mar 17 23:30 setup.sh.local
[2026-03-18 11:50:20] -rw-------. 1 boincer umatlas   1011515 Mar 17 23:31 agis_schedconf.cvmfs.json
[2026-03-18 11:50:20] -rw-------. 1 boincer umatlas       440 Mar 17 23:31 workernode_map.json
[2026-03-18 11:50:20] drwx------. 5 boincer umatlas      4096 Mar 17 23:31 pilot3
[2026-03-18 11:50:20] -rw-------. 1 boincer umatlas 296362245 Mar 18 11:44 HITS.48998032._001962.pool.root.1
[2026-03-18 11:50:20] -rw-r--r--. 1 boincer umatlas       531 Mar 18 11:44 boinc_task_state.xml
[2026-03-18 11:50:20] -rw-r--r--. 1 boincer umatlas      6842 Mar 18 11:48 init_data.xml
[2026-03-18 11:50:20] -rw-------. 1 boincer umatlas        95 Mar 18 11:48 pilot_heartbeat.json
[2026-03-18 11:50:20] -rw-------. 1 boincer umatlas      1039 Mar 18 11:48 memory_monitor_summary.json
[2026-03-18 11:50:20] -rw-------. 1 boincer umatlas   1511579 Mar 18 11:49 agis_ddmendpoints.agis.ALL.json
[2026-03-18 11:50:20] -rw-------. 1 boincer umatlas    831972 Mar 18 11:49 log.48998032._001962.job.log.tgz.1
[2026-03-18 11:50:20] -rw-------. 1 boincer umatlas      6383 Mar 18 11:49 heartbeat.json
[2026-03-18 11:50:20] -rw-------. 1 boincer umatlas      4820 Mar 18 11:50 pilotlog.txt
[2026-03-18 11:50:20] -rw-r--r--. 1 boincer umatlas        28 Mar 18 11:50 wrapper_checkpoint.txt
[2026-03-18 11:50:20] -rw-------. 1 boincer umatlas   5464716 Mar 18 11:50 log.48998032._001962.job.log.1
[2026-03-18 11:50:20] -rw-r--r--. 1 boincer umatlas      8192 Mar 18 11:50 boinc_mmap_file
[2026-03-18 11:50:20] -rw-------. 1 boincer umatlas       357 Mar 18 11:50 output.list
[2026-03-18 11:50:20] -rw-r--r--. 1 boincer umatlas       620 Mar 18 11:50 runtime_log
[2026-03-18 11:50:20] -rw-------. 1 boincer umatlas   6318080 Mar 18 11:50 result.tar.gz
[2026-03-18 11:50:20] -rw-------. 1 boincer umatlas       658 Mar 18 11:50 TCIKDmBZyJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDm9JbLDmuuaE2n.diag
[2026-03-18 11:50:20] -rw-r--r--. 1 boincer umatlas      9342 Mar 18 11:50 runtime_log.err
[2026-03-18 11:50:20] -rw-r--r--. 1 boincer umatlas     21129 Mar 18 11:50 stderr.txt
[2026-03-18 11:50:20] HITS file was successfully produced:
[2026-03-18 11:50:20] -rw-------. 1 boincer umatlas 296362245 Mar 18 11:44 shared/HITS.pool.root.1
[2026-03-18 11:50:20]  *** Contents of shared directory: ***
[2026-03-18 11:50:20] total 647960
[2026-03-18 11:50:20] -rw-r--r--. 2 boincer umatlas 360201407 Mar 17 23:30 ATLAS.root_0
[2026-03-18 11:50:20] -rw-r--r--. 2 boincer umatlas    597941 Mar 17 23:30 input.tar.gz
[2026-03-18 11:50:20] -rw-r--r--. 2 boincer umatlas     15845 Mar 17 23:30 start_atlas.sh
[2026-03-18 11:50:20] -rw-------. 1 boincer umatlas 296362245 Mar 18 11:44 HITS.pool.root.1
[2026-03-18 11:50:20] -rw-------. 1 boincer umatlas   6318080 Mar 18 11:50 result.tar.gz
11:50:22 (3339133): run_atlas exited; CPU time 59743.773697
11:50:22 (3339133): called boinc_finish(0)

</stderr_txt>
]]>

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