Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:56 (2005261): wrapper (7.7.26015): starting
00:01:56 (2005261): wrapper: running run_atlas (--nthreads 9)
[2026-03-18 00:01:56] Arguments: --nthreads 9
[2026-03-18 00:01:56] Threads: 9
[2026-03-18 00:01:56] Checking for CVMFS
[2026-03-18 00:01:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 00:01:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 00:01:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 00:01:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 00:01:58] 2.13.3.0 7038 120291 355736 157401 2 332 24863388 40960001 22322 16776704 0 415622444 99.657 381498063 34156 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-18 00:01:58] CVMFS is ok
[2026-03-18 00:01:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 00:01:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 00:01:58] Further information can be found at the LHC@home message board.
[2026-03-18 00:01:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 00:01:58] Checking for apptainer binary...
[2026-03-18 00:01:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 00:01:58] Running /usr/bin/apptainer --version
[2026-03-18 00:01:58] apptainer version 1.4.5-2.el9
[2026-03-18 00:01:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 00:01:58] c-212-4.aglt2.org
[2026-03-18 00:01:58] apptainer works
[2026-03-18 00:01:58] Set ATHENA_PROC_NUMBER=9
[2026-03-18 00:01:58] Set ATHENA_CORE_NUMBER=9
[2026-03-18 00:01:58] Starting ATLAS job with PandaID=7041376246
[2026-03-18 00:01:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 08:22:55]  *** The last 200 lines of the pilot log: ***
[2026-03-18 08:22:55] 2026-03-18 12:21:41,723 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 08:22:55] 2026-03-18 12:21:41,764 | INFO     | fitting pss+swap vs Time
[2026-03-18 08:22:55] 2026-03-18 12:21:41,766 | INFO     | sum of square deviations: 36257499319.50919
[2026-03-18 08:22:55] 2026-03-18 12:21:41,794 | INFO     | sum of deviations: 322972943669.5829
[2026-03-18 08:22:55] 2026-03-18 12:21:41,795 | INFO     | mean x: 1773821544.0552146
[2026-03-18 08:22:55] 2026-03-18 12:21:41,795 | INFO     | mean y: 2473410.163599182
[2026-03-18 08:22:55] 2026-03-18 12:21:41,795 | INFO     | intersect: -15798295434.360025
[2026-03-18 08:22:55] 2026-03-18 12:21:41,795 | INFO     | chi2: 8.558432570351052
[2026-03-18 08:22:55] 2026-03-18 12:21:41,849 | INFO     | sum of square deviations: 35156631099.494026
[2026-03-18 08:22:55] 2026-03-18 12:21:41,879 | INFO     | sum of deviations: 444631540863.0347
[2026-03-18 08:22:55] 2026-03-18 12:21:41,879 | INFO     | mean x: 1773821391.5557852
[2026-03-18 08:22:55] 2026-03-18 12:21:41,879 | INFO     | mean y: 2490227.6838842975
[2026-03-18 08:22:55] 2026-03-18 12:21:41,879 | INFO     | intersect: -22431312838.12273
[2026-03-18 08:22:55] 2026-03-18 12:21:41,880 | INFO     | chi2: 5.752275066168888
[2026-03-18 08:22:55] 2026-03-18 12:21:41,880 | INFO     | current chi2=5.752275066168888 (change=32.78821771528031 %)
[2026-03-18 08:22:55] 2026-03-18 12:21:41,881 | INFO     | sum of square deviations: 34078274929.47804
[2026-03-18 08:22:55] 2026-03-18 12:21:41,918 | INFO     | sum of deviations: 439377742582.48303
[2026-03-18 08:22:55] 2026-03-18 12:21:41,919 | INFO     | mean x: 1773821239.0563674
[2026-03-18 08:22:55] 2026-03-18 12:21:41,919 | INFO     | mean y: 2489484.7599164927
[2026-03-18 08:22:55] 2026-03-18 12:21:41,919 | INFO     | intersect: -22867728370.29003
[2026-03-18 08:22:55] 2026-03-18 12:21:41,924 | INFO     | chi2: 5.750008955729578
[2026-03-18 08:22:55] 2026-03-18 12:21:41,924 | INFO     | current chi2=5.750008955729578 (change=0.039395029153553085 %)
[2026-03-18 08:22:55] 2026-03-18 12:21:41,924 | INFO     | right removable region: 478
[2026-03-18 08:22:55] 2026-03-18 12:21:41,925 | INFO     | sum of square deviations: 35156614629.49403
[2026-03-18 08:22:55] 2026-03-18 12:21:41,929 | INFO     | sum of deviations: 175236404596.07016
[2026-03-18 08:22:55] 2026-03-18 12:21:41,930 | INFO     | mean x: 1773821696.5557852
[2026-03-18 08:22:55] 2026-03-18 12:21:41,930 | INFO     | mean y: 2493862.367768595
[2026-03-18 08:22:55] 2026-03-18 12:21:41,930 | INFO     | intersect: -8839032540.978384
[2026-03-18 08:22:55] 2026-03-18 12:21:41,930 | INFO     | chi2: 5.219881018906499
[2026-03-18 08:22:55] 2026-03-18 12:21:41,930 | INFO     | current chi2=5.219881018906499 (change=39.00891341961711 %)
[2026-03-18 08:22:55] 2026-03-18 12:21:41,931 | INFO     | sum of square deviations: 34078271512.588753
[2026-03-18 08:22:55] 2026-03-18 12:21:41,936 | INFO     | sum of deviations: 83676797947.20683
[2026-03-18 08:22:55] 2026-03-18 12:21:41,936 | INFO     | mean x: 1773821849.0542798
[2026-03-18 08:22:55] 2026-03-18 12:21:41,936 | INFO     | mean y: 2506788.338204593
[2026-03-18 08:22:55] 2026-03-18 12:21:41,936 | INFO     | intersect: -4352987955.660932
[2026-03-18 08:22:55] 2026-03-18 12:21:41,937 | INFO     | chi2: 3.912539203266469
[2026-03-18 08:22:55] 2026-03-18 12:21:41,937 | INFO     | current chi2=3.912539203266469 (change=25.04543323698021 %)
[2026-03-18 08:22:55] 2026-03-18 12:21:41,938 | INFO     | sum of square deviations: 33022267045.384018
[2026-03-18 08:22:55] 2026-03-18 12:21:41,942 | INFO     | sum of deviations: 27312650114.692024
[2026-03-18 08:22:55] 2026-03-18 12:21:41,943 | INFO     | mean x: 1773822001.5485232
[2026-03-18 08:22:55] 2026-03-18 12:21:41,943 | INFO     | mean y: 2514930.2742616036
[2026-03-18 08:22:55] 2026-03-18 12:21:41,944 | INFO     | intersect: -1464609650.4655614
[2026-03-18 08:22:55] 2026-03-18 12:21:41,945 | INFO     | chi2: 3.46964071023562
[2026-03-18 08:22:55] 2026-03-18 12:21:41,945 | INFO     | current chi2=3.46964071023562 (change=11.319975852538052 %)
[2026-03-18 08:22:55] 2026-03-18 12:21:41,945 | INFO     | left removable region: 30
[2026-03-18 08:22:55] 2026-03-18 12:21:41,945 | INFO     | sum of square deviations: 27880796918.91976
[2026-03-18 08:22:55] 2026-03-18 12:21:41,950 | INFO     | sum of deviations: 42936262828.77233
[2026-03-18 08:22:55] 2026-03-18 12:21:41,950 | INFO     | mean x: 1773822123.549107
[2026-03-18 08:22:55] 2026-03-18 12:21:41,950 | INFO     | mean y: 2548538.8058035714
[2026-03-18 08:22:55] 2026-03-18 12:21:41,950 | INFO     | intersect: -2729127070.3842936
[2026-03-18 08:22:55] 2026-03-18 12:21:41,951 | INFO     | chi2: 0.04712849937193977
[2026-03-18 08:22:55] 2026-03-18 12:21:41,951 | INFO     | current memory leak: 1.54 B/s (using 448 data points, chi2=0.05)
[2026-03-18 08:22:55] 2026-03-18 12:21:41,952 | INFO     | could have reported an average CPU frequency of 3281 MHz (20 samples)
[2026-03-18 08:22:55] 2026-03-18 12:21:41,953 | INFO     | ..............................
[2026-03-18 08:22:55] 2026-03-18 12:21:41,953 | INFO     | . Timing measurements:
[2026-03-18 08:22:55] 2026-03-18 12:21:41,953 | INFO     | . get job = 0 s
[2026-03-18 08:22:55] 2026-03-18 12:21:41,953 | INFO     | . initial setup = 18 s
[2026-03-18 08:22:55] 2026-03-18 12:21:41,953 | INFO     | . payload setup = 53 s
[2026-03-18 08:22:55] 2026-03-18 12:21:41,953 | INFO     | . stage-in = 0 s
[2026-03-18 08:22:55] 2026-03-18 12:21:41,953 | INFO     | . payload execution = 29843 s
[2026-03-18 08:22:55] 2026-03-18 12:21:41,953 | INFO     | . stage-out = 5 s
[2026-03-18 08:22:55] 2026-03-18 12:21:41,953 | INFO     | . log creation = 0 s
[2026-03-18 08:22:55] 2026-03-18 12:21:41,953 | INFO     | ..............................
[2026-03-18 08:22:55] 2026-03-18 12:21:42,352 | INFO     | 
[2026-03-18 08:22:55] 2026-03-18 12:21:42,352 | INFO     | job summary report
[2026-03-18 08:22:55] 2026-03-18 12:21:42,352 | INFO     | --------------------------------------------------
[2026-03-18 08:22:55] 2026-03-18 12:21:42,352 | INFO     | PanDA job id: 7041376246
[2026-03-18 08:22:55] 2026-03-18 12:21:42,353 | INFO     | task id: 48955006
[2026-03-18 08:22:55] 2026-03-18 12:21:42,353 | INFO     | errors: (none)
[2026-03-18 08:22:55] 2026-03-18 12:21:42,353 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 08:22:55] 2026-03-18 12:21:42,353 | INFO     | pilot state: finished 
[2026-03-18 08:22:55] 2026-03-18 12:21:42,353 | INFO     | transexitcode: 0
[2026-03-18 08:22:55] 2026-03-18 12:21:42,353 | INFO     | exeerrorcode: 0
[2026-03-18 08:22:55] 2026-03-18 12:21:42,353 | INFO     | exeerrordiag: 
[2026-03-18 08:22:55] 2026-03-18 12:21:42,353 | INFO     | exitcode: 0
[2026-03-18 08:22:55] 2026-03-18 12:21:42,353 | INFO     | exitmsg: OK
[2026-03-18 08:22:55] 2026-03-18 12:21:42,353 | INFO     | cpuconsumptiontime: 30078 s
[2026-03-18 08:22:55] 2026-03-18 12:21:42,353 | INFO     | nevents: 400
[2026-03-18 08:22:55] 2026-03-18 12:21:42,353 | INFO     | neventsw: 0
[2026-03-18 08:22:55] 2026-03-18 12:21:42,353 | INFO     | pid: 2031343
[2026-03-18 08:22:55] 2026-03-18 12:21:42,353 | INFO     | pgrp: 2031343
[2026-03-18 08:22:55] 2026-03-18 12:21:42,353 | INFO     | corecount: 9
[2026-03-18 08:22:55] 2026-03-18 12:21:42,353 | INFO     | event service: False
[2026-03-18 08:22:55] 2026-03-18 12:21:42,354 | INFO     | sizes: {0: 2279799, 1: 2279827, 2: 2280260, 12: 2280288, 29901: 2318513, 29909: 2327511, 29912: 2327695, 29914: 2327889}
[2026-03-18 08:22:55] 2026-03-18 12:21:42,354 | INFO     | --------------------------------------------------
[2026-03-18 08:22:55] 2026-03-18 12:21:42,354 | INFO     | 
[2026-03-18 08:22:55] 2026-03-18 12:21:42,354 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-03-18 08:22:55] 2026-03-18 12:21:42,572 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,572 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,572 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,572 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,572 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,572 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,572 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,573 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,573 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,573 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,573 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,573 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,573 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,573 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,573 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,573 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,573 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,573 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 08:22:55] 2026-03-18 12:21:42,573 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,573 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 08:22:55] 2026-03-18 12:21:42,573 | INFO     | job 7041376246 has completed (purged errors)
[2026-03-18 08:22:55] 2026-03-18 12:21:42,574 | INFO     | overall cleanup function is called
[2026-03-18 08:22:55] 2026-03-18 12:21:43,603 | INFO     | --- collectZombieJob: --- 10, [2031343]
[2026-03-18 08:22:55] 2026-03-18 12:21:43,603 | INFO     | zombie collector waiting for pid 2031343
[2026-03-18 08:22:55] 2026-03-18 12:21:43,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 08:22:55] 2026-03-18 12:21:43,604 | INFO     | collected zombie processes
[2026-03-18 08:22:55] 2026-03-18 12:21:43,604 | INFO     | will attempt to kill all subprocesses of pid=2031343
[2026-03-18 08:22:55] 2026-03-18 12:21:45,312 | INFO     | process IDs to be killed: [2031343] (in reverse order)
[2026-03-18 08:22:55] 2026-03-18 12:21:46,184 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 08:22:55] 2026-03-18 12:21:46,185 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 08:22:55] 2026-03-18 12:21:46,203 | INFO     | did not find any defunct processes belonging to 2031343
[2026-03-18 08:22:55] 2026-03-18 12:21:46,220 | INFO     | did not find any defunct processes belonging to 2031343
[2026-03-18 08:22:55] 2026-03-18 12:21:46,220 | INFO     | ready for new job
[2026-03-18 08:22:55] 2026-03-18 12:21:46,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 08:22:55] 2026-03-18 12:21:46,223 | INFO     | **************************************
[2026-03-18 08:22:55] 2026-03-18 12:21:46,223 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-18 08:22:55] 2026-03-18 12:21:46,224 | INFO     | **************************************
[2026-03-18 08:22:55] 2026-03-18 12:21:46,224 | INFO     | 
[2026-03-18 08:22:55] 2026-03-18 12:21:46,228 | INFO     | architecture information:
[2026-03-18 08:22:55] 2026-03-18 12:21:46,229 | INFO     | executing command: cat /etc/os-release
[2026-03-18 08:22:55] 2026-03-18 12:21:46,282 | INFO     | cat /etc/os-release:
[2026-03-18 08:22:55] NAME="CentOS Linux"
[2026-03-18 08:22:55] VERSION="7 (Core)"
[2026-03-18 08:22:55] ID="centos"
[2026-03-18 08:22:55] ID_LIKE="rhel fedora"
[2026-03-18 08:22:55] VERSION_ID="7"
[2026-03-18 08:22:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 08:22:55] ANSI_COLOR="0;31"
[2026-03-18 08:22:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 08:22:55] HOME_URL="https://www.centos.org/"
[2026-03-18 08:22:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 08:22:55] 
[2026-03-18 08:22:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 08:22:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 08:22:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 08:22:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 08:22:55] 
[2026-03-18 08:22:55] 2026-03-18 12:21:46,283 | INFO     | **************************************
[2026-03-18 08:22:55] 2026-03-18 12:21:46,794 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-03-18 08:22:55] 2026-03-18 12:21:46,992 | INFO     | sufficient remaining disk space (125313220608 B)
[2026-03-18 08:22:55] 2026-03-18 12:21:46,992 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 08:22:55] 2026-03-18 12:21:46,992 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 08:22:55] 2026-03-18 12:21:46,992 | INFO     | update_server=False
[2026-03-18 08:22:55] 2026-03-18 12:21:46,992 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 08:22:55] 2026-03-18 12:21:47,001 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 08:22:55] 2026-03-18 12:21:47,111 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 08:22:55] 2026-03-18 12:21:47,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 08:22:55] 2026-03-18 12:21:47,327 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-18 08:22:55] 2026-03-18 12:21:47,327 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-18 08:22:55] 2026-03-18 12:21:47,327 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 08:22:55] 2026-03-18 12:21:47,327 | INFO     | will abort loop
[2026-03-18 08:22:55] 2026-03-18 12:21:47,648 | INFO     | all data control threads have been joined
[2026-03-18 08:22:55] 2026-03-18 12:21:47,763 | INFO     | all job control threads have been joined
[2026-03-18 08:22:55] 2026-03-18 12:21:47,998 | INFO     | [job] retrieve thread has finished
[2026-03-18 08:22:55] 2026-03-18 12:21:48,067 | INFO     | [payload] validate_post thread has finished
[2026-03-18 08:22:55] 2026-03-18 12:21:48,115 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 08:22:55] 2026-03-18 12:21:48,119 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 08:22:55] 2026-03-18 12:21:48,181 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 08:22:55] 2026-03-18 12:21:48,311 | INFO     | [job] queue monitor thread has finished
[2026-03-18 08:22:55] 2026-03-18 12:21:48,333 | INFO     | [job] job monitor thread has finished
[2026-03-18 08:22:55] 2026-03-18 12:21:48,333 | INFO     | all payload control threads have been joined
[2026-03-18 08:22:55] 2026-03-18 12:21:48,620 | INFO     | [job] validate thread has finished
[2026-03-18 08:22:55] 2026-03-18 12:21:48,625 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 08:22:55] 2026-03-18 12:21:48,654 | INFO     | [data] control thread has finished
[2026-03-18 08:22:55] 2026-03-18 12:21:48,770 | INFO     | [job] control thread has finished
[2026-03-18 08:22:55] 2026-03-18 12:21:48,929 | INFO     | [data] copytool_in thread has finished
[2026-03-18 08:22:55] 2026-03-18 12:21:49,136 | INFO     | [data] copytool_out thread has finished
[2026-03-18 08:22:55] 2026-03-18 12:21:49,339 | INFO     | [payload] control thread has finished
[2026-03-18 08:22:55] 2026-03-18 12:21:49,458 | INFO     | [payload] failed_post thread has finished
[2026-03-18 08:22:55] 2026-03-18 12:21:51,015 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 08:22:55] 2026-03-18 12:22:15,565 | INFO     | PID=2009444 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 08:22:55] 2026-03-18 12:22:15,565 | INFO     | .. there are 25 such processes running
[2026-03-18 08:22:55] 2026-03-18 12:22:15,565 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 08:22:55] 2026-03-18 12:22:15,565 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 08:22:55] 2026-03-18 12:22:15,565 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 08:22:55] 2026-03-18 12:22:46,413 | INFO     | [monitor] cgroup control has ended
[2026-03-18 08:22:55] 2026-03-18 12:22:48,256 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139703137154880)>', '<ExcThread(monitor, started 139702795495168)>']
[2026-03-18 08:22:55] 2026-03-18 12:22:48,797 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 08:22:55] 2026-03-18 12:22:48,797 | INFO     | [monitor] control thread has ended
[2026-03-18 08:22:55] 2026-03-18 12:22:53,283 | INFO     | all workflow threads have been joined
[2026-03-18 08:22:55] 2026-03-18 12:22:53,283 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 08:22:55] 2026-03-18 12:22:53,283 | INFO     | traces error code: 0
[2026-03-18 08:22:55] 2026-03-18 12:22:53,284 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 08:22:55] 2026-03-18 12:22:53,727 [wrapper] ==== pilot stdout END ====
[2026-03-18 08:22:55] 2026-03-18 12:22:53,793 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 08:22:55] 2026-03-18 12:22:53,876 [wrapper] pilotpid: 2009444
[2026-03-18 08:22:55] 2026-03-18 12:22:54,010 [wrapper] Pilot exit status: 0
[2026-03-18 08:22:55] 2026-03-18 12:22:54,381 [wrapper] pandaids: 7041376246
[2026-03-18 08:22:55] 2026-03-18 12:22:54,513 [wrapper] cleanup supervisor_pilot 3299178 2009445
[2026-03-18 08:22:55] 2026-03-18 12:22:54,580 [wrapper] Test setup, not cleaning
[2026-03-18 08:22:55] 2026-03-18 12:22:54,596 [wrapper] apfmon messages muted
[2026-03-18 08:22:55] 2026-03-18 12:22:54,631 [wrapper] ==== wrapper stdout END ====
[2026-03-18 08:22:55] 2026-03-18 12:22:54,690 [wrapper] ==== wrapper stderr END ====
[2026-03-18 08:22:55]  *** Error codes and diagnostics ***
[2026-03-18 08:22:55]     "exeErrorCode": 0,
[2026-03-18 08:22:55]     "exeErrorDiag": "",
[2026-03-18 08:22:55]     "pilotErrorCode": 0,
[2026-03-18 08:22:55]     "pilotErrorDiag": "",
[2026-03-18 08:22:55]  *** Listing of results directory ***
[2026-03-18 08:22:55] total 623384
[2026-03-18 08:22:55] -rw-r--r--. 1 boincer umatlas      5111 Mar  9 19:46 queuedata.json
[2026-03-18 08:22:55] -rw-r--r--. 1 boincer umatlas    584627 Mar  9 19:46 pilot3.tar.gz
[2026-03-18 08:22:55] -rwx------. 1 boincer umatlas     36322 Mar  9 19:46 runpilot2-wrapper.sh
[2026-03-18 08:22:55] -rw-r--r--. 1 boincer umatlas       100 Mar 18 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 08:22:55] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 18 00:01 run_atlas
[2026-03-18 08:22:55] -rw-r--r--. 1 boincer umatlas       105 Mar 18 00:01 job.xml
[2026-03-18 08:22:55] -rw-r--r--. 2 boincer umatlas 442741894 Mar 18 00:01 EVNT.46701403._000712.pool.root.1
[2026-03-18 08:22:55] -rw-r--r--. 2 boincer umatlas     15845 Mar 18 00:01 start_atlas.sh
[2026-03-18 08:22:55] drwxrwx--x. 2 boincer umatlas      4096 Mar 18 00:01 shared
[2026-03-18 08:22:55] -rw-r--r--. 2 boincer umatlas    597958 Mar 18 00:01 input.tar.gz
[2026-03-18 08:22:55] -rw-r--r--. 1 boincer umatlas         0 Mar 18 00:01 boinc_lockfile
[2026-03-18 08:22:55] -rw-r--r--. 1 boincer umatlas      2565 Mar 18 00:01 pandaJob.out
[2026-03-18 08:22:55] -rw-------. 1 boincer umatlas        57 Mar 18 00:01 setup.sh.local
[2026-03-18 08:22:55] -rw-------. 1 boincer umatlas   1011515 Mar 18 00:02 agis_schedconf.cvmfs.json
[2026-03-18 08:22:55] -rw-------. 1 boincer umatlas       428 Mar 18 00:02 workernode_map.json
[2026-03-18 08:22:55] drwx------. 5 boincer umatlas      4096 Mar 18 00:02 pilot3
[2026-03-18 08:22:55] -rw-------. 1 boincer umatlas 182434311 Mar 18 08:16 HITS.48955006._035612.pool.root.1
[2026-03-18 08:22:55] -rw-r--r--. 1 boincer umatlas       532 Mar 18 08:16 boinc_task_state.xml
[2026-03-18 08:22:55] -rw-r--r--. 1 boincer umatlas      6958 Mar 18 08:18 init_data.xml
[2026-03-18 08:22:55] -rw-------. 1 boincer umatlas        95 Mar 18 08:21 pilot_heartbeat.json
[2026-03-18 08:22:55] -rw-------. 1 boincer umatlas      1047 Mar 18 08:21 memory_monitor_summary.json
[2026-03-18 08:22:55] -rw-------. 1 boincer umatlas   1511579 Mar 18 08:21 agis_ddmendpoints.agis.ALL.json
[2026-03-18 08:22:55] -rw-------. 1 boincer umatlas    713012 Mar 18 08:21 log.48955006._035612.job.log.tgz.1
[2026-03-18 08:22:55] -rw-------. 1 boincer umatlas      6349 Mar 18 08:21 heartbeat.json
[2026-03-18 08:22:55] -rw-r--r--. 1 boincer umatlas      8192 Mar 18 08:22 boinc_mmap_file
[2026-03-18 08:22:55] -rw-r--r--. 1 boincer umatlas        28 Mar 18 08:22 wrapper_checkpoint.txt
[2026-03-18 08:22:55] -rw-------. 1 boincer umatlas      5007 Mar 18 08:22 pilotlog.txt
[2026-03-18 08:22:55] -rw-------. 1 boincer umatlas   3909804 Mar 18 08:22 log.48955006._035612.job.log.1
[2026-03-18 08:22:55] -rw-------. 1 boincer umatlas       357 Mar 18 08:22 output.list
[2026-03-18 08:22:55] -rw-r--r--. 1 boincer umatlas       620 Mar 18 08:22 runtime_log
[2026-03-18 08:22:55] -rw-------. 1 boincer umatlas   4638720 Mar 18 08:22 result.tar.gz
[2026-03-18 08:22:55] -rw-r--r--. 1 boincer umatlas      9337 Mar 18 08:22 runtime_log.err
[2026-03-18 08:22:55] -rw-------. 1 boincer umatlas       660 Mar 18 08:22 fQAMDmtTzJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmnPbLDm7qq8ym.diag
[2026-03-18 08:22:55] -rw-r--r--. 1 boincer umatlas      2143 Mar 18 08:22 stderr.txt
[2026-03-18 08:22:55] HITS file was successfully produced:
[2026-03-18 08:22:55] -rw-------. 1 boincer umatlas 182434311 Mar 18 08:16 shared/HITS.pool.root.1
[2026-03-18 08:22:55]  *** Contents of shared directory: ***
[2026-03-18 08:22:55] total 615664
[2026-03-18 08:22:55] -rw-r--r--. 2 boincer umatlas 442741894 Mar 18 00:01 ATLAS.root_0
[2026-03-18 08:22:55] -rw-r--r--. 2 boincer umatlas     15845 Mar 18 00:01 start_atlas.sh
[2026-03-18 08:22:55] -rw-r--r--. 2 boincer umatlas    597958 Mar 18 00:01 input.tar.gz
[2026-03-18 08:22:55] -rw-------. 1 boincer umatlas 182434311 Mar 18 08:16 HITS.pool.root.1
[2026-03-18 08:22:55] -rw-------. 1 boincer umatlas   4638720 Mar 18 08:22 result.tar.gz
08:22:57 (2005261): run_atlas exited; CPU time 31307.074851
08:22:57 (2005261): called boinc_finish(0)

</stderr_txt>
]]>

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