Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:19:23 (13680): wrapper (7.7.26015): starting
22:19:23 (13680): wrapper: running run_atlas (--nthreads 12)
[2026-03-17 22:19:23] Arguments: --nthreads 12
[2026-03-17 22:19:23] Threads: 12
[2026-03-17 22:19:23] Checking for CVMFS
[2026-03-17 22:19:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 22:19:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 22:19:24] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 22:19:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 22:19:24] 2.11.2.0 3173 25037 92368 157397 1 50 16375502 20275201 1 130560 0 15142200 99.988 902821 17074 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-17 22:19:24] CVMFS is ok
[2026-03-17 22:19:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 22:19:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 22:19:24] Further information can be found at the LHC@home message board.
[2026-03-17 22:19:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 22:19:24] Checking for apptainer binary...
[2026-03-17 22:19:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 22:19:24] Running /usr/bin/apptainer --version
[2026-03-17 22:19:24] apptainer version 1.3.2-1.el7
[2026-03-17 22:19:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 22:19:25] c-115-40.aglt2.org
[2026-03-17 22:19:25] apptainer works
[2026-03-17 22:19:25] Set ATHENA_PROC_NUMBER=12
[2026-03-17 22:19:25] Set ATHENA_CORE_NUMBER=12
[2026-03-17 22:19:25] Starting ATLAS job with PandaID=7049377015
[2026-03-17 22:19:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 23:35:00]  *** The last 200 lines of the pilot log: ***
[2026-03-17 23:35:00]  guid=0ce3cc06-aaf3-4cd2-a1a3-00e6560fedeb
[2026-03-17 23:35:00]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-17 23:35:00]  is_altstaged=None
[2026-03-17 23:35:00]  is_tar=False
[2026-03-17 23:35:00]  lfn=log.48967085._005307.job.log.tgz.1
[2026-03-17 23:35:00]  mtime=0
[2026-03-17 23:35:00]  protocol_id=None
[2026-03-17 23:35:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-17 23:35:00]  replicas=None
[2026-03-17 23:35:00]  scope=mc23_13p6TeV
[2026-03-17 23:35:00]  status=None
[2026-03-17 23:35:00]  status_code=0
[2026-03-17 23:35:00]  storage_token=
[2026-03-17 23:35:00]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7049377015/log.48967085._005307.job.log.tgz.1
[2026-03-17 23:35:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/b9/log.48967085._005307.job.log.tgz.1
[2026-03-17 23:35:00]  workdir=None
[2026-03-17 23:35:00] ]
[2026-03-17 23:35:00] 2026-03-18 03:34:22,690 | INFO     | transferring file log.48967085._005307.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7049377015/log.48967085._005307.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-17 23:35:00] 2026-03-18 03:34:22,690 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7049377015/log.48967085._005307.job.log.tgz.1 /tmp/boinchome/slots/0/log.48967085._005307.job
[2026-03-17 23:35:00] 2026-03-18 03:34:22,712 | INFO     | adding to output.list: log.48967085._005307.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/b9/log.48967085._005307.job.log.tg
[2026-03-17 23:35:00] 2026-03-18 03:34:22,713 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-17 23:35:00] 2026-03-18 03:34:22,714 | INFO     | summary of transferred files:
[2026-03-17 23:35:00] 2026-03-18 03:34:22,714 | INFO     |  -- lfn=log.48967085._005307.job.log.tgz.1, status_code=0, status=transferred
[2026-03-17 23:35:00] 2026-03-18 03:34:22,714 | INFO     | stage-out finished correctly
[2026-03-17 23:35:00] 2026-03-18 03:34:22,791 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-17 23:35:00] 2026-03-18 03:34:23,596 | INFO     | time since job start (4477s) is within the limit (345600.0s)
[2026-03-17 23:35:00] 2026-03-18 03:34:23,883 | WARNING  | process 22585 can no longer be monitored (due to stat problems) - aborting
[2026-03-17 23:35:00] 2026-03-18 03:34:23,884 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7049377015/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 23:35:00] 2026-03-18 03:34:23,964 | INFO     | number of running child processes to parent process 22585: 1
[2026-03-17 23:35:00] 2026-03-18 03:34:23,964 | INFO     | maximum number of monitored processes: 6
[2026-03-17 23:35:00] 2026-03-18 03:34:24,869 | INFO     | job 7049377015 has state=finished
[2026-03-17 23:35:00] 2026-03-18 03:34:24,869 | INFO     | preparing for final server update for job 7049377015 in state='finished'
[2026-03-17 23:35:00] 2026-03-18 03:34:24,870 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7049377015/jobReport.json
[2026-03-17 23:35:00] 2026-03-18 03:34:24,872 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-17 23:35:00] 2026-03-18 03:34:24,873 | INFO     | this job has now completed (state=finished)
[2026-03-17 23:35:00] 2026-03-18 03:34:24,873 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-17 23:35:00] 2026-03-18 03:34:24,873 | INFO     | log transfer has been attempted: DONE
[2026-03-17 23:35:00] 2026-03-18 03:34:24,873 | INFO     | job 7049377015 has finished - writing final server update
[2026-03-17 23:35:00] 2026-03-18 03:34:24,874 | INFO     | total number of processed events: 400 (read)
[2026-03-17 23:35:00] 2026-03-18 03:34:24,876 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7049377015/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 23:35:00] 2026-03-18 03:34:24,877 | INFO     | extracted standard info from prmon json
[2026-03-17 23:35:00] 2026-03-18 03:34:24,877 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 23:35:00] 2026-03-18 03:34:24,877 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 23:35:00] 2026-03-18 03:34:24,878 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 23:35:00] 2026-03-18 03:34:24,878 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 23:35:00] 2026-03-18 03:34:24,879 | INFO     | fitting pss+swap vs Time
[2026-03-17 23:35:00] 2026-03-18 03:34:24,879 | INFO     | sum of square deviations: 89127252.5
[2026-03-17 23:35:00] 2026-03-18 03:34:24,879 | INFO     | sum of deviations: -4362823791.5
[2026-03-17 23:35:00] 2026-03-18 03:34:24,880 | INFO     | mean x: 1773802697.5
[2026-03-17 23:35:00] 2026-03-18 03:34:24,880 | INFO     | mean y: 2810034.590909091
[2026-03-17 23:35:00] 2026-03-18 03:34:24,880 | INFO     | intersect: 86831343317.15651
[2026-03-17 23:35:00] 2026-03-18 03:34:24,880 | INFO     | chi2: 0.025216617121234942
[2026-03-17 23:35:00] 2026-03-18 03:34:24,880 | INFO     | current memory leak: -48.95 B/s (using 66 data points, chi2=0.03)
[2026-03-17 23:35:00] 2026-03-18 03:34:24,880 | INFO     | could have reported an average CPU frequency of 1740 MHz (6 samples)
[2026-03-17 23:35:00] 2026-03-18 03:34:24,881 | INFO     | ..............................
[2026-03-17 23:35:00] 2026-03-18 03:34:24,881 | INFO     | . Timing measurements:
[2026-03-17 23:35:00] 2026-03-18 03:34:24,881 | INFO     | . get job = 0 s
[2026-03-17 23:35:00] 2026-03-18 03:34:24,881 | INFO     | . initial setup = 7 s
[2026-03-17 23:35:00] 2026-03-18 03:34:24,881 | INFO     | . payload setup = 6 s
[2026-03-17 23:35:00] 2026-03-18 03:34:24,881 | INFO     | . stage-in = 0 s
[2026-03-17 23:35:00] 2026-03-18 03:34:24,881 | INFO     | . payload execution = 4453 s
[2026-03-17 23:35:00] 2026-03-18 03:34:24,881 | INFO     | . stage-out = 0 s
[2026-03-17 23:35:00] 2026-03-18 03:34:24,881 | INFO     | . log creation = 0 s
[2026-03-17 23:35:00] 2026-03-18 03:34:24,881 | INFO     | ..............................
[2026-03-17 23:35:00] 2026-03-18 03:34:24,951 | INFO     | 
[2026-03-17 23:35:00] 2026-03-18 03:34:24,952 | INFO     | job summary report
[2026-03-17 23:35:00] 2026-03-18 03:34:24,952 | INFO     | --------------------------------------------------
[2026-03-17 23:35:00] 2026-03-18 03:34:24,952 | INFO     | PanDA job id: 7049377015
[2026-03-17 23:35:00] 2026-03-18 03:34:24,952 | INFO     | task id: 48967085
[2026-03-17 23:35:00] 2026-03-18 03:34:24,952 | INFO     | errors: (none)
[2026-03-17 23:35:00] 2026-03-18 03:34:24,952 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 23:35:00] 2026-03-18 03:34:24,953 | INFO     | pilot state: finished 
[2026-03-17 23:35:00] 2026-03-18 03:34:24,953 | INFO     | transexitcode: 0
[2026-03-17 23:35:00] 2026-03-18 03:34:24,953 | INFO     | exeerrorcode: 0
[2026-03-17 23:35:00] 2026-03-18 03:34:24,953 | INFO     | exeerrordiag: 
[2026-03-17 23:35:00] 2026-03-18 03:34:24,953 | INFO     | exitcode: 0
[2026-03-17 23:35:00] 2026-03-18 03:34:24,953 | INFO     | exitmsg: OK
[2026-03-17 23:35:00] 2026-03-18 03:34:24,953 | INFO     | cpuconsumptiontime: 49015 s
[2026-03-17 23:35:00] 2026-03-18 03:34:24,954 | INFO     | nevents: 400
[2026-03-17 23:35:00] 2026-03-18 03:34:24,954 | INFO     | neventsw: 0
[2026-03-17 23:35:00] 2026-03-18 03:34:24,954 | INFO     | pid: 22585
[2026-03-17 23:35:00] 2026-03-18 03:34:24,954 | INFO     | pgrp: 22585
[2026-03-17 23:35:00] 2026-03-18 03:34:24,954 | INFO     | corecount: 12
[2026-03-17 23:35:00] 2026-03-18 03:34:24,954 | INFO     | event service: False
[2026-03-17 23:35:00] 2026-03-18 03:34:24,954 | INFO     | sizes: {0: 2279805, 1: 2280266, 11: 2280266, 4464: 2306346, 4466: 2315400, 4468: 2315538}
[2026-03-17 23:35:00] 2026-03-18 03:34:24,955 | INFO     | --------------------------------------------------
[2026-03-17 23:35:00] 2026-03-18 03:34:24,955 | INFO     | 
[2026-03-17 23:35:00] 2026-03-18 03:34:24,955 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-17 23:35:00] 2026-03-18 03:34:24,980 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,980 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,980 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,981 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,981 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,981 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,981 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,981 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,982 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,982 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,982 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,982 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,982 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,982 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,983 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,983 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,983 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,983 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 23:35:00] 2026-03-18 03:34:24,983 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,983 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 23:35:00] 2026-03-18 03:34:24,984 | INFO     | job 7049377015 has completed (purged errors)
[2026-03-17 23:35:00] 2026-03-18 03:34:24,984 | INFO     | overall cleanup function is called
[2026-03-17 23:35:00] 2026-03-18 03:34:25,992 | INFO     | --- collectZombieJob: --- 10, [22585]
[2026-03-17 23:35:00] 2026-03-18 03:34:25,992 | INFO     | zombie collector waiting for pid 22585
[2026-03-17 23:35:00] 2026-03-18 03:34:25,992 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 23:35:00] 2026-03-18 03:34:25,993 | INFO     | collected zombie processes
[2026-03-17 23:35:00] 2026-03-18 03:34:25,993 | INFO     | will attempt to kill all subprocesses of pid=22585
[2026-03-17 23:35:00] 2026-03-18 03:34:26,076 | INFO     | process IDs to be killed: [22585] (in reverse order)
[2026-03-17 23:35:00] 2026-03-18 03:34:26,129 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 23:35:00] 2026-03-18 03:34:26,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 23:35:00] 2026-03-18 03:34:26,132 | INFO     | did not find any defunct processes belonging to 22585
[2026-03-17 23:35:00] 2026-03-18 03:34:26,135 | INFO     | did not find any defunct processes belonging to 22585
[2026-03-17 23:35:00] 2026-03-18 03:34:26,136 | INFO     | ready for new job
[2026-03-17 23:35:00] 2026-03-18 03:34:26,136 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 23:35:00] 2026-03-18 03:34:26,137 | INFO     | **************************************
[2026-03-17 23:35:00] 2026-03-18 03:34:26,138 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 23:35:00] 2026-03-18 03:34:26,138 | INFO     | **************************************
[2026-03-17 23:35:00] 2026-03-18 03:34:26,138 | INFO     | 
[2026-03-17 23:35:00] 2026-03-18 03:34:26,139 | INFO     | architecture information:
[2026-03-17 23:35:00] 2026-03-18 03:34:26,139 | INFO     | executing command: cat /etc/os-release
[2026-03-17 23:35:00] 2026-03-18 03:34:26,154 | INFO     | cat /etc/os-release:
[2026-03-17 23:35:00] NAME="CentOS Linux"
[2026-03-17 23:35:00] VERSION="7 (Core)"
[2026-03-17 23:35:00] ID="centos"
[2026-03-17 23:35:00] ID_LIKE="rhel fedora"
[2026-03-17 23:35:00] VERSION_ID="7"
[2026-03-17 23:35:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 23:35:00] ANSI_COLOR="0;31"
[2026-03-17 23:35:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 23:35:00] HOME_URL="https://www.centos.org/"
[2026-03-17 23:35:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 23:35:00] 
[2026-03-17 23:35:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 23:35:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 23:35:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 23:35:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 23:35:00] 
[2026-03-17 23:35:00] 2026-03-18 03:34:26,154 | INFO     | **************************************
[2026-03-17 23:35:00] 2026-03-18 03:34:26,657 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-17 23:35:00] 2026-03-18 03:34:26,686 | INFO     | sufficient remaining disk space (18685624320 B)
[2026-03-17 23:35:00] 2026-03-18 03:34:26,687 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 23:35:00] 2026-03-18 03:34:26,687 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 23:35:00] 2026-03-18 03:34:26,687 | INFO     | update_server=False
[2026-03-17 23:35:00] 2026-03-18 03:34:26,687 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 23:35:00] 2026-03-18 03:34:26,688 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 23:35:00] 2026-03-18 03:34:26,688 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 23:35:00] 2026-03-18 03:34:26,772 | INFO     | all data control threads have been joined
[2026-03-17 23:35:00] 2026-03-18 03:34:26,804 | INFO     | all payload control threads have been joined
[2026-03-17 23:35:00] 2026-03-18 03:34:27,472 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 23:35:00] 2026-03-18 03:34:27,472 | INFO     | aborting loop
[2026-03-17 23:35:00] 2026-03-18 03:34:27,693 | INFO     | [job] retrieve thread has finished
[2026-03-17 23:35:00] 2026-03-18 03:34:27,694 | INFO     | [job] queue monitor thread has finished
[2026-03-17 23:35:00] 2026-03-18 03:34:27,775 | INFO     | [data] control thread has finished
[2026-03-17 23:35:00] 2026-03-18 03:34:27,805 | INFO     | [payload] control thread has finished
[2026-03-17 23:35:00] 2026-03-18 03:34:27,806 | INFO     | all job control threads have been joined
[2026-03-17 23:35:00] 2026-03-18 03:34:28,049 | INFO     | [payload] failed_post thread has finished
[2026-03-17 23:35:00] 2026-03-18 03:34:28,469 | INFO     | [job] validate thread has finished
[2026-03-17 23:35:00] 2026-03-18 03:34:28,478 | INFO     | [job] job monitor thread has finished
[2026-03-17 23:35:00] 2026-03-18 03:34:28,673 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 23:35:00] 2026-03-18 03:34:28,694 | INFO     | [data] copytool_out thread has finished
[2026-03-17 23:35:00] 2026-03-18 03:34:28,751 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 23:35:00] 2026-03-18 03:34:28,811 | INFO     | [job] control thread has finished
[2026-03-17 23:35:00] 2026-03-18 03:34:28,870 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 23:35:00] 2026-03-18 03:34:28,903 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 23:35:00] 2026-03-18 03:34:28,990 | INFO     | [data] copytool_in thread has finished
[2026-03-17 23:35:00] 2026-03-18 03:34:29,159 | INFO     | [payload] validate_post thread has finished
[2026-03-17 23:35:00] 2026-03-18 03:34:32,876 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 23:35:00] 2026-03-18 03:34:37,557 | INFO     | job.realtimelogging is not enabled
[2026-03-17 23:35:00] 2026-03-18 03:34:38,562 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 23:35:00] 2026-03-18 03:34:38,994 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-03-17 23:35:00] 2026-03-18 03:34:52,868 | INFO     | [monitor] cgroup control has ended
[2026-03-17 23:35:00] 2026-03-18 03:34:54,822 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139961680295744)>', '<ExcThread(monitor, started 139960921331456)>']
[2026-03-17 23:35:00] 2026-03-18 03:34:56,793 | INFO     | PID=17657 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-17 23:35:00] 2026-03-18 03:34:56,794 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 23:35:00] 2026-03-18 03:34:56,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 23:35:00] 2026-03-18 03:34:56,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 23:35:00] 2026-03-18 03:34:56,794 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 23:35:00] 2026-03-18 03:34:56,794 | INFO     | [monitor] control thread has ended
[2026-03-17 23:35:00] 2026-03-18 03:34:59,833 | INFO     | all workflow threads have been joined
[2026-03-17 23:35:00] 2026-03-18 03:34:59,834 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 23:35:00] 2026-03-18 03:34:59,834 | INFO     | traces error code: 0
[2026-03-17 23:35:00] 2026-03-18 03:34:59,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 23:35:00] 2026-03-18 03:34:59,921 [wrapper] ==== pilot stdout END ====
[2026-03-17 23:35:00] 2026-03-18 03:34:59,925 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 23:35:00] 2026-03-18 03:34:59,928 [wrapper] pilotpid: 17657
[2026-03-17 23:35:00] 2026-03-18 03:34:59,932 [wrapper] Pilot exit status: 0
[2026-03-17 23:35:00] 2026-03-18 03:34:59,947 [wrapper] pandaids: 7049377015
[2026-03-17 23:35:00] 2026-03-18 03:34:59,986 [wrapper] cleanup supervisor_pilot 18764 17658
[2026-03-17 23:35:00] 2026-03-18 03:34:59,990 [wrapper] Test setup, not cleaning
[2026-03-17 23:35:00] 2026-03-18 03:34:59,993 [wrapper] apfmon messages muted
[2026-03-17 23:35:00] 2026-03-18 03:34:59,997 [wrapper] ==== wrapper stdout END ====
[2026-03-17 23:35:00] 2026-03-18 03:35:00,000 [wrapper] ==== wrapper stderr END ====
[2026-03-17 23:35:00]  *** Error codes and diagnostics ***
[2026-03-17 23:35:00]     "exeErrorCode": 0,
[2026-03-17 23:35:00]     "exeErrorDiag": "",
[2026-03-17 23:35:00]     "pilotErrorCode": 0,
[2026-03-17 23:35:00]     "pilotErrorDiag": "",
[2026-03-17 23:35:00]  *** Listing of results directory ***
[2026-03-17 23:35:00] total 405272
[2026-03-17 23:35:00] -rw-r--r-- 1 boincer umatlas    585013 Mar 10 22:46 pilot3.tar.gz
[2026-03-17 23:35:00] -rwx------ 1 boincer umatlas     36322 Mar 10 22:46 runpilot2-wrapper.sh
[2026-03-17 23:35:00] -rw-r--r-- 1 boincer umatlas      5111 Mar 10 22:46 queuedata.json
[2026-03-17 23:35:00] -rw-r--r-- 1 boincer umatlas       100 Mar 17 22:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 23:35:00] -rwxr-xr-x 1 boincer umatlas      7986 Mar 17 22:19 run_atlas
[2026-03-17 23:35:00] -rw-r--r-- 1 boincer umatlas       105 Mar 17 22:19 job.xml
[2026-03-17 23:35:00] -rw-r--r-- 2 boincer umatlas 213867642 Mar 17 22:19 EVNT.48967083._000213.pool.root.1
[2026-03-17 23:35:00] -rw-r--r-- 2 boincer umatlas     15845 Mar 17 22:19 start_atlas.sh
[2026-03-17 23:35:00] drwxrwx--x 2 boincer umatlas      4096 Mar 17 22:19 shared
[2026-03-17 23:35:00] -rw-r--r-- 2 boincer umatlas    597519 Mar 17 22:19 input.tar.gz
[2026-03-17 23:35:00] -rw-r--r-- 1 boincer umatlas         0 Mar 17 22:19 boinc_lockfile
[2026-03-17 23:35:00] -rw-r--r-- 1 boincer umatlas      2561 Mar 17 22:19 pandaJob.out
[2026-03-17 23:35:00] -rw------- 1 boincer umatlas        57 Mar 17 22:19 setup.sh.local
[2026-03-17 23:35:00] -rw------- 1 boincer umatlas   1011515 Mar 17 22:19 agis_schedconf.cvmfs.json
[2026-03-17 23:35:00] -rw------- 1 boincer umatlas   1511579 Mar 17 22:19 agis_ddmendpoints.agis.ALL.json
[2026-03-17 23:35:00] -rw------- 1 boincer umatlas       445 Mar 17 22:19 workernode_map.json
[2026-03-17 23:35:00] drwx------ 5 boincer umatlas      4096 Mar 17 22:19 pilot3
[2026-03-17 23:35:00] -rw-r--r-- 1 boincer umatlas      5953 Mar 17 23:29 init_data.xml
[2026-03-17 23:35:00] -rw------- 1 boincer umatlas 195134894 Mar 17 23:33 HITS.48967085._005307.pool.root.1
[2026-03-17 23:35:00] -rw------- 1 boincer umatlas      1045 Mar 17 23:34 memory_monitor_summary.json
[2026-03-17 23:35:00] -rw-r--r-- 1 boincer umatlas       529 Mar 17 23:34 boinc_task_state.xml
[2026-03-17 23:35:00] -rw------- 1 boincer umatlas    375097 Mar 17 23:34 log.48967085._005307.job.log.tgz.1
[2026-03-17 23:35:00] -rw------- 1 boincer umatlas      6416 Mar 17 23:34 heartbeat.json
[2026-03-17 23:35:00] -rw-r--r-- 1 boincer umatlas      8192 Mar 17 23:34 boinc_mmap_file
[2026-03-17 23:35:00] -rw-r--r-- 1 boincer umatlas        27 Mar 17 23:34 wrapper_checkpoint.txt
[2026-03-17 23:35:00] -rw------- 1 boincer umatlas        95 Mar 17 23:34 pilot_heartbeat.json
[2026-03-17 23:35:00] -rw------- 1 boincer umatlas      4814 Mar 17 23:34 pilotlog.txt
[2026-03-17 23:35:00] -rw------- 1 boincer umatlas    651959 Mar 17 23:35 log.48967085._005307.job.log.1
[2026-03-17 23:35:00] -rw------- 1 boincer umatlas       357 Mar 17 23:35 output.list
[2026-03-17 23:35:00] -rw-r--r-- 1 boincer umatlas       620 Mar 17 23:35 runtime_log
[2026-03-17 23:35:00] -rw------- 1 boincer umatlas   1044480 Mar 17 23:35 result.tar.gz
[2026-03-17 23:35:00] -rw------- 1 boincer umatlas       658 Mar 17 23:35 xzkMDmtlOK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmf2hLDmghYNxm.diag
[2026-03-17 23:35:00] -rw-r--r-- 1 boincer umatlas      9343 Mar 17 23:35 runtime_log.err
[2026-03-17 23:35:00] -rw-r--r-- 1 boincer umatlas     21338 Mar 17 23:35 stderr.txt
[2026-03-17 23:35:00] HITS file was successfully produced:
[2026-03-17 23:35:00] -rw------- 1 boincer umatlas 195134894 Mar 17 23:33 shared/HITS.pool.root.1
[2026-03-17 23:35:00]  *** Contents of shared directory: ***
[2026-03-17 23:35:00] total 401044
[2026-03-17 23:35:00] -rw-r--r-- 2 boincer umatlas 213867642 Mar 17 22:19 ATLAS.root_0
[2026-03-17 23:35:00] -rw-r--r-- 2 boincer umatlas     15845 Mar 17 22:19 start_atlas.sh
[2026-03-17 23:35:00] -rw-r--r-- 2 boincer umatlas    597519 Mar 17 22:19 input.tar.gz
[2026-03-17 23:35:00] -rw------- 1 boincer umatlas 195134894 Mar 17 23:33 HITS.pool.root.1
[2026-03-17 23:35:00] -rw------- 1 boincer umatlas   1044480 Mar 17 23:35 result.tar.gz
23:35:02 (13680): run_atlas exited; CPU time 49020.999422
23:35:02 (13680): called boinc_finish(0)

</stderr_txt>
]]>

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