Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:50:27 (3300722): wrapper (7.7.26015): starting
18:50:27 (3300722): wrapper: running run_atlas (--nthreads 4)
[2026-03-24 18:50:27] Arguments: --nthreads 4
[2026-03-24 18:50:27] Threads: 4
[2026-03-24 18:50:27] Checking for CVMFS
[2026-03-24 18:50:27] No cvmfs_config command found, will try listing directly
[2026-03-24 18:50:27] CVMFS is ok
[2026-03-24 18:50:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 18:50:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 18:50:27] Further information can be found at the LHC@home message board.
[2026-03-24 18:50:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 18:50:27] Checking for apptainer binary...
[2026-03-24 18:50:27] which: no apptainer in ((null))
[2026-03-24 18:50:27] apptainer is not installed, using version from CVMFS
[2026-03-24 18:50:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 18:50:27] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-03-24 18:50:27] apptainer works
[2026-03-24 18:50:27] Set ATHENA_PROC_NUMBER=4
[2026-03-24 18:50:27] Set ATHENA_CORE_NUMBER=4
[2026-03-24 18:50:27] Starting ATLAS job with PandaID=7056910792
[2026-03-24 18:50:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 22:23:05]  *** The last 200 lines of the pilot log: ***
[2026-03-24 22:23:05] 2026-03-24 21:18:26,078 | INFO     | log transfer has been attempted: DONE
[2026-03-24 22:23:05] 2026-03-24 21:18:26,078 | INFO     | job 7056910792 has finished - writing final server update
[2026-03-24 22:23:05] 2026-03-24 21:18:26,079 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3529187/.job.ad'
[2026-03-24 22:23:05] 2026-03-24 21:18:26,079 | INFO     | total number of processed events: 400 (read)
[2026-03-24 22:23:05] 2026-03-24 21:18:26,112 | INFO     | using path: /var/lib/boinc/var/slot44/slots/3/PanDA_Pilot-7056910792/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 22:23:05] 2026-03-24 21:18:26,113 | INFO     | extracted standard info from prmon json
[2026-03-24 22:23:05] 2026-03-24 21:18:26,113 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 22:23:05] 2026-03-24 21:18:26,113 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 22:23:05] 2026-03-24 21:18:26,113 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 22:23:05] 2026-03-24 21:18:26,113 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 22:23:05] 2026-03-24 21:18:26,118 | INFO     | fitting pss+swap vs Time
[2026-03-24 22:23:05] 2026-03-24 21:18:26,118 | INFO     | sum of square deviations: 2632440055.0
[2026-03-24 22:23:05] 2026-03-24 21:18:26,120 | INFO     | sum of deviations: 24886934024.999992
[2026-03-24 22:23:05] 2026-03-24 21:18:26,120 | INFO     | mean x: 1774380875.5
[2026-03-24 22:23:05] 2026-03-24 21:18:26,120 | INFO     | mean y: 2317722.725490196
[2026-03-24 22:23:05] 2026-03-24 21:18:26,120 | INFO     | intersect: -16772575099.588076
[2026-03-24 22:23:05] 2026-03-24 21:18:26,120 | INFO     | chi2: 1.3710869181358607
[2026-03-24 22:23:05] 2026-03-24 21:18:26,121 | INFO     | sum of square deviations: 2443580700.0
[2026-03-24 22:23:05] 2026-03-24 21:18:26,122 | INFO     | sum of deviations: 23539529486.0
[2026-03-24 22:23:05] 2026-03-24 21:18:26,122 | INFO     | mean x: 1774380723.0
[2026-03-24 22:23:05] 2026-03-24 21:18:26,122 | INFO     | mean y: 2316645.010050251
[2026-03-24 22:23:05] 2026-03-24 21:18:26,122 | INFO     | intersect: -17090667985.474426
[2026-03-24 22:23:05] 2026-03-24 21:18:26,123 | INFO     | chi2: 1.3701412799278783
[2026-03-24 22:23:05] 2026-03-24 21:18:26,123 | INFO     | current chi2=1.3701412799278783 (change=0.06896996794835822 %)
[2026-03-24 22:23:05] 2026-03-24 21:18:26,123 | INFO     | right removable region: 198
[2026-03-24 22:23:05] 2026-03-24 21:18:26,123 | INFO     | sum of square deviations: 2443580700.0
[2026-03-24 22:23:05] 2026-03-24 21:18:26,125 | INFO     | sum of deviations: -2013873031.9999998
[2026-03-24 22:23:05] 2026-03-24 21:18:26,125 | INFO     | mean x: 1774381028.0
[2026-03-24 22:23:05] 2026-03-24 21:18:26,125 | INFO     | mean y: 2339179.8090452263
[2026-03-24 22:23:05] 2026-03-24 21:18:26,125 | INFO     | intersect: 1464692398.093032
[2026-03-24 22:23:05] 2026-03-24 21:18:26,126 | INFO     | chi2: 0.016232667088509872
[2026-03-24 22:23:05] 2026-03-24 21:18:26,126 | INFO     | current chi2=0.016232667088509872 (change=98.81607308232655 %)
[2026-03-24 22:23:05] 2026-03-24 21:18:26,126 | INFO     | sum of square deviations: 2263977332.5
[2026-03-24 22:23:05] 2026-03-24 21:18:26,127 | INFO     | sum of deviations: -838355116.5000006
[2026-03-24 22:23:05] 2026-03-24 21:18:26,128 | INFO     | mean x: 1774381180.5
[2026-03-24 22:23:05] 2026-03-24 21:18:26,128 | INFO     | mean y: 2338177.8711340204
[2026-03-24 22:23:05] 2026-03-24 21:18:26,128 | INFO     | intersect: 659394907.1674669
[2026-03-24 22:23:05] 2026-03-24 21:18:26,128 | INFO     | chi2: 0.015003703780194586
[2026-03-24 22:23:05] 2026-03-24 21:18:26,128 | INFO     | current chi2=0.015003703780194586 (change=7.570926586581667 %)
[2026-03-24 22:23:05] 2026-03-24 21:18:26,128 | INFO     | left removable region: 20
[2026-03-24 22:23:05] 2026-03-24 21:18:26,129 | INFO     | sum of square deviations: 1748737904.5
[2026-03-24 22:23:05] 2026-03-24 21:18:26,132 | INFO     | sum of deviations: 2277533545.4999995
[2026-03-24 22:23:05] 2026-03-24 21:18:26,133 | INFO     | mean x: 1774381302.5
[2026-03-24 22:23:05] 2026-03-24 21:18:26,133 | INFO     | mean y: 2333824.679775281
[2026-03-24 22:23:05] 2026-03-24 21:18:26,133 | INFO     | intersect: -2308597349.4844847
[2026-03-24 22:23:05] 2026-03-24 21:18:26,133 | INFO     | chi2: 0.003754173049078659
[2026-03-24 22:23:05] 2026-03-24 21:18:26,133 | INFO     | current memory leak: 1.30 B/s (using 178 data points, chi2=0.00)
[2026-03-24 22:23:05] 2026-03-24 21:18:26,134 | INFO     | could have reported an average CPU frequency of 2706 MHz (10 samples)
[2026-03-24 22:23:05] 2026-03-24 21:18:26,134 | INFO     | ..............................
[2026-03-24 22:23:05] 2026-03-24 21:18:26,134 | INFO     | . Timing measurements:
[2026-03-24 22:23:05] 2026-03-24 21:18:26,134 | INFO     | . get job = 0 s
[2026-03-24 22:23:05] 2026-03-24 21:18:26,135 | INFO     | . initial setup = 8 s
[2026-03-24 22:23:05] 2026-03-24 21:18:26,135 | INFO     | . payload setup = 14 s
[2026-03-24 22:23:05] 2026-03-24 21:18:26,135 | INFO     | . stage-in = 0 s
[2026-03-24 22:23:05] 2026-03-24 21:18:26,135 | INFO     | . payload execution = 12421 s
[2026-03-24 22:23:05] 2026-03-24 21:18:26,135 | INFO     | . stage-out = 1 s
[2026-03-24 22:23:05] 2026-03-24 21:18:26,135 | INFO     | . log creation = 0 s
[2026-03-24 22:23:05] 2026-03-24 21:18:26,135 | INFO     | ..............................
[2026-03-24 22:23:05] 2026-03-24 21:18:26,233 | INFO     | 
[2026-03-24 22:23:05] 2026-03-24 21:18:26,233 | INFO     | job summary report
[2026-03-24 22:23:05] 2026-03-24 21:18:26,233 | INFO     | --------------------------------------------------
[2026-03-24 22:23:05] 2026-03-24 21:18:26,233 | INFO     | PanDA job id: 7056910792
[2026-03-24 22:23:05] 2026-03-24 21:18:26,233 | INFO     | task id: 48967094
[2026-03-24 22:23:05] 2026-03-24 21:18:26,233 | INFO     | errors: (none)
[2026-03-24 22:23:05] 2026-03-24 21:18:26,234 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 22:23:05] 2026-03-24 21:18:26,234 | INFO     | pilot state: finished 
[2026-03-24 22:23:05] 2026-03-24 21:18:26,234 | INFO     | transexitcode: 0
[2026-03-24 22:23:05] 2026-03-24 21:18:26,234 | INFO     | exeerrorcode: 0
[2026-03-24 22:23:05] 2026-03-24 21:18:26,234 | INFO     | exeerrordiag: 
[2026-03-24 22:23:05] 2026-03-24 21:18:26,234 | INFO     | exitcode: 0
[2026-03-24 22:23:05] 2026-03-24 21:18:26,234 | INFO     | exitmsg: OK
[2026-03-24 22:23:05] 2026-03-24 21:18:26,234 | INFO     | cpuconsumptiontime: 47811 s
[2026-03-24 22:23:05] 2026-03-24 21:18:26,234 | INFO     | nevents: 400
[2026-03-24 22:23:05] 2026-03-24 21:18:26,234 | INFO     | neventsw: 0
[2026-03-24 22:23:05] 2026-03-24 21:18:26,234 | INFO     | pid: 3310209
[2026-03-24 22:23:05] 2026-03-24 21:18:26,246 | INFO     | pgrp: 3310209
[2026-03-24 22:23:05] 2026-03-24 21:18:26,246 | INFO     | corecount: 4
[2026-03-24 22:23:05] 2026-03-24 21:18:26,246 | INFO     | event service: False
[2026-03-24 22:23:05] 2026-03-24 21:18:26,246 | INFO     | sizes: {0: 2280241, 11: 2280241, 12440: 2310601, 12442: 2319621, 12444: 2319871}
[2026-03-24 22:23:05] 2026-03-24 21:18:26,246 | INFO     | --------------------------------------------------
[2026-03-24 22:23:05] 2026-03-24 21:18:26,246 | INFO     | 
[2026-03-24 22:23:05] 2026-03-24 21:18:26,246 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/3
[2026-03-24 22:23:05] 2026-03-24 21:18:26,282 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,283 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,283 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,283 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,284 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,284 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,284 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,284 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,284 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,284 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,284 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,284 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,285 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 22:23:05] 2026-03-24 21:18:26,285 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,285 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 22:23:05] 2026-03-24 21:18:26,285 | INFO     | job 7056910792 has completed (purged errors)
[2026-03-24 22:23:05] 2026-03-24 21:18:26,285 | INFO     | overall cleanup function is called
[2026-03-24 22:23:05] 2026-03-24 21:18:26,999 | INFO     | PID=3304894 has CPU usage=17.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-24 22:23:05] 2026-03-24 21:18:26,999 | INFO     | .. there are 20 such processes running
[2026-03-24 22:23:05] 2026-03-24 21:18:27,296 | INFO     | --- collectZombieJob: --- 10, [3310209]
[2026-03-24 22:23:05] 2026-03-24 21:18:27,296 | INFO     | zombie collector waiting for pid 3310209
[2026-03-24 22:23:05] 2026-03-24 21:18:27,296 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 22:23:05] 2026-03-24 21:18:27,296 | INFO     | collected zombie processes
[2026-03-24 22:23:05] 2026-03-24 21:18:27,296 | INFO     | will attempt to kill all subprocesses of pid=3310209
[2026-03-24 22:23:05] 2026-03-24 21:18:28,706 | INFO     | process IDs to be killed: [3310209] (in reverse order)
[2026-03-24 22:23:05] 2026-03-24 21:18:29,020 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 22:23:05] 2026-03-24 21:18:29,021 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 22:23:05] 2026-03-24 21:18:29,098 | INFO     | did not find any defunct processes belonging to 3310209
[2026-03-24 22:23:05] 2026-03-24 21:18:29,166 | INFO     | did not find any defunct processes belonging to 3310209
[2026-03-24 22:23:05] 2026-03-24 21:18:29,166 | INFO     | ready for new job
[2026-03-24 22:23:05] 2026-03-24 21:18:29,166 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 22:23:05] 2026-03-24 21:18:29,169 | INFO     | **************************************
[2026-03-24 22:23:05] 2026-03-24 21:18:29,169 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 22:23:05] 2026-03-24 21:18:29,169 | INFO     | **************************************
[2026-03-24 22:23:05] 2026-03-24 21:18:29,169 | INFO     | 
[2026-03-24 22:23:05] 2026-03-24 21:18:29,180 | INFO     | architecture information:
[2026-03-24 22:23:05] 2026-03-24 21:18:29,181 | INFO     | executing command: cat /etc/os-release
[2026-03-24 22:23:05] 2026-03-24 21:18:29,206 | INFO     | cat /etc/os-release:
[2026-03-24 22:23:05] NAME="CentOS Linux"
[2026-03-24 22:23:05] VERSION="7 (Core)"
[2026-03-24 22:23:05] ID="centos"
[2026-03-24 22:23:05] ID_LIKE="rhel fedora"
[2026-03-24 22:23:05] VERSION_ID="7"
[2026-03-24 22:23:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 22:23:05] ANSI_COLOR="0;31"
[2026-03-24 22:23:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 22:23:05] HOME_URL="https://www.centos.org/"
[2026-03-24 22:23:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 22:23:05] 
[2026-03-24 22:23:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 22:23:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 22:23:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 22:23:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 22:23:05] 
[2026-03-24 22:23:05] 2026-03-24 21:18:29,206 | INFO     | **************************************
[2026-03-24 22:23:05] 2026-03-24 21:18:29,292 | WARNING  | process 3310209 can no longer be monitored (due to stat problems) - aborting
[2026-03-24 22:23:05] 2026-03-24 21:18:29,709 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/3
[2026-03-24 22:23:05] 2026-03-24 21:18:29,737 | INFO     | sufficient remaining disk space (209519116288 B)
[2026-03-24 22:23:05] 2026-03-24 21:18:29,737 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 22:23:05] 2026-03-24 21:18:29,738 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 22:23:05] 2026-03-24 21:18:29,738 | INFO     | update_server=False
[2026-03-24 22:23:05] 2026-03-24 21:18:29,738 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 22:23:05] 2026-03-24 21:18:29,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 22:23:05] 2026-03-24 21:18:29,750 | INFO     | all payload control threads have been joined
[2026-03-24 22:23:05] 2026-03-24 21:18:29,914 | INFO     | using path: /var/lib/boinc/var/slot44/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 22:23:05] 2026-03-24 21:18:30,666 | INFO     | all data control threads have been joined
[2026-03-24 22:23:05] 2026-03-24 21:18:30,717 | INFO     | number of running child processes to parent process 3310209: 1
[2026-03-24 22:23:05] 2026-03-24 21:18:30,718 | INFO     | maximum number of monitored processes: 6
[2026-03-24 22:23:05] 2026-03-24 21:18:30,718 | INFO     | aborting job monitoring since job object (job id=7056910792) has expired
[2026-03-24 22:23:05] 2026-03-24 21:18:30,718 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 22:23:05] 2026-03-24 21:18:30,718 | INFO     | will abort loop
[2026-03-24 22:23:05] 2026-03-24 21:18:30,743 | INFO     | [job] retrieve thread has finished
[2026-03-24 22:23:05] 2026-03-24 21:18:30,756 | INFO     | [payload] control thread has finished
[2026-03-24 22:23:05] 2026-03-24 21:18:30,898 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 22:23:05] 2026-03-24 21:18:31,009 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 22:23:05] 2026-03-24 21:18:31,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 22:23:05] 2026-03-24 21:18:31,306 | INFO     | [payload] validate_post thread has finished
[2026-03-24 22:23:05] 2026-03-24 21:18:31,363 | INFO     | all job control threads have been joined
[2026-03-24 22:23:05] 2026-03-24 21:18:31,420 | INFO     | [data] copytool_in thread has finished
[2026-03-24 22:23:05] 2026-03-24 21:18:31,508 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 22:23:05] 2026-03-24 21:18:31,671 | INFO     | [data] control thread has finished
[2026-03-24 22:23:05] 2026-03-24 21:18:31,723 | INFO     | [job] job monitor thread has finished
[2026-03-24 22:23:05] 2026-03-24 21:18:31,744 | INFO     | [data] copytool_out thread has finished
[2026-03-24 22:23:05] 2026-03-24 21:18:31,794 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 22:23:05] 2026-03-24 21:18:32,080 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 22:23:05] 2026-03-24 21:18:32,122 | INFO     | [job] validate thread has finished
[2026-03-24 22:23:05] 2026-03-24 21:18:32,236 | INFO     | [payload] failed_post thread has finished
[2026-03-24 22:23:05] 2026-03-24 21:18:32,251 | INFO     | [job] queue monitor thread has finished
[2026-03-24 22:23:05] 2026-03-24 21:18:32,368 | INFO     | [job] control thread has finished
[2026-03-24 22:23:05] 2026-03-24 21:18:36,086 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 22:23:05] 2026-03-24 21:19:00,066 | INFO     | PID=3304894 has CPU usage=14.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-24 22:23:05] 2026-03-24 21:19:00,066 | INFO     | .. there are 20 such processes running
[2026-03-24 22:23:05] 2026-03-24 21:19:00,067 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 22:23:05] 2026-03-24 21:19:00,067 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 22:23:05] 2026-03-24 21:19:00,067 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 22:23:05] 2026-03-24 21:19:10,720 | INFO     | [monitor] cgroup control has ended
[2026-03-24 22:23:05] 2026-03-24 21:19:10,863 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23287959316288)>', '<ExcThread(monitor, started 23287720851200)>']
[2026-03-24 22:23:05] 2026-03-24 21:19:11,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 22:23:05] 2026-03-24 21:19:11,122 | INFO     | [monitor] control thread has ended
[2026-03-24 22:23:05] 2026-03-24 21:19:15,888 | INFO     | all workflow threads have been joined
[2026-03-24 22:23:05] 2026-03-24 21:19:15,888 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 22:23:05] 2026-03-24 21:19:15,888 | INFO     | traces error code: 0
[2026-03-24 22:23:05] 2026-03-24 21:19:15,889 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 22:23:05] 2026-03-24 21:19:16,071 [wrapper] ==== pilot stdout END ====
[2026-03-24 22:23:05] 2026-03-24 21:19:16,075 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 22:23:05] 2026-03-24 21:19:16,079 [wrapper] pilotpid: 3304894
[2026-03-24 22:23:05] 2026-03-24 21:19:16,084 [wrapper] Pilot exit status: 0
[2026-03-24 22:23:05] 2026-03-24 21:19:16,098 [wrapper] pandaids: 7056910792
[2026-03-24 22:23:05] 2026-03-24 21:19:16,298 [wrapper] cleanup supervisor_pilot 3599734 3304895
[2026-03-24 22:23:05] 2026-03-24 21:19:16,302 [wrapper] Test setup, not cleaning
[2026-03-24 22:23:05] 2026-03-24 21:19:16,306 [wrapper] apfmon messages muted
[2026-03-24 22:23:05] 2026-03-24 21:19:16,309 [wrapper] ==== wrapper stdout END ====
[2026-03-24 22:23:05] 2026-03-24 21:19:16,313 [wrapper] ==== wrapper stderr END ====
[2026-03-24 22:23:05]  *** Error codes and diagnostics ***
[2026-03-24 22:23:05]     "exeErrorCode": 0,
[2026-03-24 22:23:05]     "exeErrorDiag": "",
[2026-03-24 22:23:05]     "pilotErrorCode": 0,
[2026-03-24 22:23:05]     "pilotErrorDiag": "",
[2026-03-24 22:23:05]  *** Listing of results directory ***
[2026-03-24 22:23:05] total 427956
[2026-03-24 22:23:05] -rw-r--r--. 1 boinc boinc    585013 Mar 18 02:12 pilot3.tar.gz
[2026-03-24 22:23:05] -rwx------. 1 boinc boinc     36322 Mar 18 02:16 runpilot2-wrapper.sh
[2026-03-24 22:23:05] -rw-r--r--. 1 boinc boinc      5111 Mar 18 02:20 queuedata.json
[2026-03-24 22:23:05] -rw-r--r--. 1 boinc boinc       100 Mar 24 18:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 22:23:05] -rwxr-xr-x. 1 boinc boinc      7986 Mar 24 18:50 run_atlas
[2026-03-24 22:23:05] -rw-r--r--. 1 boinc boinc       105 Mar 24 18:50 job.xml
[2026-03-24 22:23:05] -rw-r--r--. 1 boinc boinc      6622 Mar 24 18:50 init_data.xml
[2026-03-24 22:23:05] -rw-r--r--. 2 boinc boinc 217751306 Mar 24 18:50 EVNT.48967092._000444.pool.root.1
[2026-03-24 22:23:05] -rw-r--r--. 2 boinc boinc     15845 Mar 24 18:50 start_atlas.sh
[2026-03-24 22:23:05] drwxrwx--x. 2 boinc boinc      4096 Mar 24 18:50 shared
[2026-03-24 22:23:05] -rw-r--r--. 2 boinc boinc    597540 Mar 24 18:50 input.tar.gz
[2026-03-24 22:23:05] -rw-r--r--. 1 boinc boinc         0 Mar 24 18:50 boinc_lockfile
[2026-03-24 22:23:05] -rw-r--r--. 1 boinc boinc      2601 Mar 24 18:50 pandaJob.out
[2026-03-24 22:23:05] -rw-------. 1 boinc boinc   1010852 Mar 24 18:50 agis_schedconf.cvmfs.json
[2026-03-24 22:23:05] -rw-------. 1 boinc boinc       443 Mar 24 18:50 workernode_map.json
[2026-03-24 22:23:05] drwx------. 5 boinc boinc      4096 Mar 24 18:50 pilot3
[2026-03-24 22:23:05] -rw-------. 1 boinc boinc 212357574 Mar 24 22:17 HITS.48967094._011257.pool.root.1
[2026-03-24 22:23:05] -rw-r--r--. 1 boinc boinc       529 Mar 24 22:17 boinc_task_state.xml
[2026-03-24 22:23:05] -rw-------. 1 boinc boinc        95 Mar 24 22:18 pilot_heartbeat.json
[2026-03-24 22:23:05] -rw-------. 1 boinc boinc      1026 Mar 24 22:18 memory_monitor_summary.json
[2026-03-24 22:23:05] -rw-------. 1 boinc boinc   1511579 Mar 24 22:18 agis_ddmendpoints.agis.ALL.json
[2026-03-24 22:23:05] -rw-------. 1 boinc boinc    368046 Mar 24 22:18 log.48967094._011257.job.log.tgz.1
[2026-03-24 22:23:05] -rw-------. 1 boinc boinc      6353 Mar 24 22:18 heartbeat.json
[2026-03-24 22:23:05] -rw-------. 1 boinc boinc      5363 Mar 24 22:19 pilotlog.txt
[2026-03-24 22:23:05] -rw-------. 1 boinc boinc   1719798 Mar 24 22:19 log.48967094._011257.job.log.1
[2026-03-24 22:23:05] -rw-------. 1 boinc boinc       357 Mar 24 22:19 output.list
[2026-03-24 22:23:05] -rw-r--r--. 1 boinc boinc       620 Mar 24 22:19 runtime_log
[2026-03-24 22:23:05] -rw-------. 1 boinc boinc   2109440 Mar 24 22:19 result.tar.gz
[2026-03-24 22:23:05] -rw-r--r--. 1 boinc boinc      9205 Mar 24 22:19 runtime_log.err
[2026-03-24 22:23:05] -rw-------. 1 boinc boinc       666 Mar 24 22:19 64JLDmQhuM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmaUyLDmD5zd5n.diag
[2026-03-24 22:23:05] -rw-r--r--. 1 boinc boinc        27 Mar 24 22:23 wrapper_checkpoint.txt
[2026-03-24 22:23:05] -rw-r--r--. 1 boinc boinc      8192 Mar 24 22:23 boinc_mmap_file
[2026-03-24 22:23:05] -rw-r--r--. 1 boinc boinc     21197 Mar 24 22:23 stderr.txt
[2026-03-24 22:23:05] HITS file was successfully produced:
[2026-03-24 22:23:05] -rw-------. 1 boinc boinc 212357574 Mar 24 22:17 shared/HITS.pool.root.1
[2026-03-24 22:23:05]  *** Contents of shared directory: ***
[2026-03-24 22:23:05] total 422700
[2026-03-24 22:23:05] -rw-r--r--. 2 boinc boinc 217751306 Mar 24 18:50 ATLAS.root_0
[2026-03-24 22:23:05] -rw-r--r--. 2 boinc boinc     15845 Mar 24 18:50 start_atlas.sh
[2026-03-24 22:23:05] -rw-r--r--. 2 boinc boinc    597540 Mar 24 18:50 input.tar.gz
[2026-03-24 22:23:05] -rw-------. 1 boinc boinc 212357574 Mar 24 22:17 HITS.pool.root.1
[2026-03-24 22:23:05] -rw-------. 1 boinc boinc   2109440 Mar 24 22:19 result.tar.gz
22:23:06 (3300722): run_atlas exited; CPU time 48625.825862
22:23:06 (3300722): called boinc_finish(0)

</stderr_txt>
]]>

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