Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:12:08 (20260): wrapper (7.7.26015): starting
06:12:08 (20260): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 06:12:08] Arguments: --nthreads 8
[2026-03-18 06:12:08] Threads: 8
[2026-03-18 06:12:08] Checking for CVMFS
[2026-03-18 06:12:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 06:12:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 06:12:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 06:12:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 06:12:08] 2.11.2.0 3733 278844 150760 157409 2 50 13731374 18432000 1833 130560 0 180049854 99.980 10632221 27021 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-18 06:12:08] CVMFS is ok
[2026-03-18 06:12:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 06:12:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 06:12:08] Further information can be found at the LHC@home message board.
[2026-03-18 06:12:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 06:12:08] Checking for apptainer binary...
[2026-03-18 06:12:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 06:12:08] Running /usr/bin/apptainer --version
[2026-03-18 06:12:08] apptainer version 1.3.2-1.el7
[2026-03-18 06:12:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 06:12:09] c-206-23.aglt2.org
[2026-03-18 06:12:09] apptainer works
[2026-03-18 06:12:09] Set ATHENA_PROC_NUMBER=8
[2026-03-18 06:12:09] Set ATHENA_CORE_NUMBER=8
[2026-03-18 06:12:09] Starting ATLAS job with PandaID=7057846445
[2026-03-18 06:12:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 12:01:05]  *** The last 200 lines of the pilot log: ***
[2026-03-18 12:01:05] 2026-03-18 16:00:18,601 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 12:01:05] 2026-03-18 16:00:18,602 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 12:01:05] 2026-03-18 16:00:18,611 | INFO     | fitting pss+swap vs Time
[2026-03-18 12:01:05] 2026-03-18 16:00:18,612 | INFO     | sum of square deviations: 12403750705.5
[2026-03-18 12:01:05] 2026-03-18 16:00:18,616 | INFO     | sum of deviations: 63538097546.5
[2026-03-18 12:01:05] 2026-03-18 16:00:18,616 | INFO     | mean x: 1773839159.5
[2026-03-18 12:01:05] 2026-03-18 16:00:18,617 | INFO     | mean y: 2510102.17251462
[2026-03-18 12:01:05] 2026-03-18 16:00:18,617 | INFO     | intersect: -9083964483.142794
[2026-03-18 12:01:05] 2026-03-18 16:00:18,617 | INFO     | chi2: 1.4030440028426623
[2026-03-18 12:01:05] 2026-03-18 16:00:18,618 | INFO     | sum of square deviations: 11867638328.0
[2026-03-18 12:01:05] 2026-03-18 16:00:18,622 | INFO     | sum of deviations: 62419343669.0
[2026-03-18 12:01:05] 2026-03-18 16:00:18,623 | INFO     | mean x: 1773839007.0
[2026-03-18 12:01:05] 2026-03-18 16:00:18,623 | INFO     | mean y: 2509784.005934718
[2026-03-18 12:01:05] 2026-03-18 16:00:18,623 | INFO     | intersect: -9327220658.670115
[2026-03-18 12:01:05] 2026-03-18 16:00:18,624 | INFO     | chi2: 1.4032197346116693
[2026-03-18 12:01:05] 2026-03-18 16:00:18,624 | INFO     | current chi2=1.4032197346116693 (change=-0.01252503618211097 %)
[2026-03-18 12:01:05] 2026-03-18 16:00:18,624 | INFO     | right removable region: 336
[2026-03-18 12:01:05] 2026-03-18 16:00:18,625 | INFO     | sum of square deviations: 11867638328.0
[2026-03-18 12:01:05] 2026-03-18 16:00:18,629 | INFO     | sum of deviations: 13628912861.000002
[2026-03-18 12:01:05] 2026-03-18 16:00:18,629 | INFO     | mean x: 1773839312.0
[2026-03-18 12:01:05] 2026-03-18 16:00:18,629 | INFO     | mean y: 2524200.356083086
[2026-03-18 12:01:05] 2026-03-18 16:00:18,630 | INFO     | intersect: -2034570354.1371684
[2026-03-18 12:01:05] 2026-03-18 16:00:18,630 | INFO     | chi2: 0.06463549937451743
[2026-03-18 12:01:05] 2026-03-18 16:00:18,631 | INFO     | current chi2=0.06463549937451743 (change=95.39319513546535 %)
[2026-03-18 12:01:05] 2026-03-18 16:00:18,631 | INFO     | sum of square deviations: 11347200663.0
[2026-03-18 12:01:05] 2026-03-18 16:00:18,634 | INFO     | sum of deviations: 2046055930.5000005
[2026-03-18 12:01:05] 2026-03-18 16:00:18,634 | INFO     | mean x: 1773839464.5
[2026-03-18 12:01:05] 2026-03-18 16:00:18,634 | INFO     | mean y: 2527587.3463855423
[2026-03-18 12:01:05] 2026-03-18 16:00:18,634 | INFO     | intersect: -317320000.0792542
[2026-03-18 12:01:05] 2026-03-18 16:00:18,635 | INFO     | chi2: 0.006534768655852999
[2026-03-18 12:01:05] 2026-03-18 16:00:18,635 | INFO     | current chi2=0.006534768655852999 (change=89.88981485547347 %)
[2026-03-18 12:01:05] 2026-03-18 16:00:18,635 | INFO     | sum of square deviations: 10842205148.0
[2026-03-18 12:01:05] 2026-03-18 16:00:18,637 | INFO     | sum of deviations: -886957324.0000004
[2026-03-18 12:01:05] 2026-03-18 16:00:18,638 | INFO     | mean x: 1773839617.0
[2026-03-18 12:01:05] 2026-03-18 16:00:18,638 | INFO     | mean y: 2528471.489296636
[2026-03-18 12:01:05] 2026-03-18 16:00:18,638 | INFO     | intersect: 147639177.14586014
[2026-03-18 12:01:05] 2026-03-18 16:00:18,638 | INFO     | chi2: 0.0037835824115947762
[2026-03-18 12:01:05] 2026-03-18 16:00:18,638 | INFO     | current chi2=0.0037835824115947762 (change=42.10074432847851 %)
[2026-03-18 12:01:05] 2026-03-18 16:00:18,639 | INFO     | sum of square deviations: 10352419220.5
[2026-03-18 12:01:05] 2026-03-18 16:00:18,641 | INFO     | sum of deviations: -2475003385.999999
[2026-03-18 12:01:05] 2026-03-18 16:00:18,641 | INFO     | mean x: 1773839769.5
[2026-03-18 12:01:05] 2026-03-18 16:00:18,641 | INFO     | mean y: 2528965.3602484474
[2026-03-18 12:01:05] 2026-03-18 16:00:18,641 | INFO     | intersect: 426609495.9323013
[2026-03-18 12:01:05] 2026-03-18 16:00:18,642 | INFO     | chi2: 0.0028767584677126925
[2026-03-18 12:01:05] 2026-03-18 16:00:18,642 | INFO     | current chi2=0.0028767584677126925 (change=23.967336910731078 %)
[2026-03-18 12:01:05] 2026-03-18 16:00:18,642 | INFO     | left removable region: 40
[2026-03-18 12:01:05] 2026-03-18 16:00:18,642 | INFO     | sum of square deviations: 8041713570.0
[2026-03-18 12:01:05] 2026-03-18 16:00:18,644 | INFO     | sum of deviations: 1114492387.0
[2026-03-18 12:01:05] 2026-03-18 16:00:18,644 | INFO     | mean x: 1773840196.5
[2026-03-18 12:01:05] 2026-03-18 16:00:18,644 | INFO     | mean y: 2527593.168918919
[2026-03-18 12:01:05] 2026-03-18 16:00:18,644 | INFO     | intersect: -243307001.35442644
[2026-03-18 12:01:05] 2026-03-18 16:00:18,645 | INFO     | chi2: 0.0008897886895232488
[2026-03-18 12:01:05] 2026-03-18 16:00:18,645 | INFO     | current memory leak: 0.14 B/s (using 296 data points, chi2=0.00)
[2026-03-18 12:01:05] 2026-03-18 16:00:18,645 | INFO     | could have reported an average CPU frequency of 2455 MHz (15 samples)
[2026-03-18 12:01:05] 2026-03-18 16:00:18,645 | INFO     | ..............................
[2026-03-18 12:01:05] 2026-03-18 16:00:18,646 | INFO     | . Timing measurements:
[2026-03-18 12:01:05] 2026-03-18 16:00:18,646 | INFO     | . get job = 0 s
[2026-03-18 12:01:05] 2026-03-18 16:00:18,646 | INFO     | . initial setup = 6 s
[2026-03-18 12:01:05] 2026-03-18 16:00:18,646 | INFO     | . payload setup = 7 s
[2026-03-18 12:01:05] 2026-03-18 16:00:18,646 | INFO     | . stage-in = 0 s
[2026-03-18 12:01:05] 2026-03-18 16:00:18,646 | INFO     | . payload execution = 20855 s
[2026-03-18 12:01:05] 2026-03-18 16:00:18,646 | INFO     | . stage-out = 2 s
[2026-03-18 12:01:05] 2026-03-18 16:00:18,646 | INFO     | . log creation = 0 s
[2026-03-18 12:01:05] 2026-03-18 16:00:18,646 | INFO     | ..............................
[2026-03-18 12:01:05] 2026-03-18 16:00:18,729 | INFO     | 
[2026-03-18 12:01:05] 2026-03-18 16:00:18,729 | INFO     | job summary report
[2026-03-18 12:01:05] 2026-03-18 16:00:18,729 | INFO     | --------------------------------------------------
[2026-03-18 12:01:05] 2026-03-18 16:00:18,729 | INFO     | PanDA job id: 7057846445
[2026-03-18 12:01:05] 2026-03-18 16:00:18,729 | INFO     | task id: 49191939
[2026-03-18 12:01:05] 2026-03-18 16:00:18,729 | INFO     | errors: (none)
[2026-03-18 12:01:05] 2026-03-18 16:00:18,729 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 12:01:05] 2026-03-18 16:00:18,729 | INFO     | pilot state: finished 
[2026-03-18 12:01:05] 2026-03-18 16:00:18,729 | INFO     | transexitcode: 0
[2026-03-18 12:01:05] 2026-03-18 16:00:18,730 | INFO     | exeerrorcode: 0
[2026-03-18 12:01:05] 2026-03-18 16:00:18,730 | INFO     | exeerrordiag: 
[2026-03-18 12:01:05] 2026-03-18 16:00:18,730 | INFO     | exitcode: 0
[2026-03-18 12:01:05] 2026-03-18 16:00:18,730 | INFO     | exitmsg: OK
[2026-03-18 12:01:05] 2026-03-18 16:00:18,730 | INFO     | cpuconsumptiontime: 159414 s
[2026-03-18 12:01:05] 2026-03-18 16:00:18,730 | INFO     | nevents: 400
[2026-03-18 12:01:05] 2026-03-18 16:00:18,730 | INFO     | neventsw: 0
[2026-03-18 12:01:05] 2026-03-18 16:00:18,730 | INFO     | pid: 28351
[2026-03-18 12:01:05] 2026-03-18 16:00:18,730 | INFO     | pgrp: 28351
[2026-03-18 12:01:05] 2026-03-18 16:00:18,730 | INFO     | corecount: 8
[2026-03-18 12:01:05] 2026-03-18 16:00:18,731 | INFO     | event service: False
[2026-03-18 12:01:05] 2026-03-18 16:00:18,731 | INFO     | sizes: {0: 2280207, 1: 2280295, 20867: 2313808, 20869: 2322806, 20871: 2322862, 20872: 2323056}
[2026-03-18 12:01:05] 2026-03-18 16:00:18,731 | INFO     | --------------------------------------------------
[2026-03-18 12:01:05] 2026-03-18 16:00:18,731 | INFO     | 
[2026-03-18 12:01:05] 2026-03-18 16:00:18,731 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-18 12:01:05] 2026-03-18 16:00:18,747 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,747 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,748 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,748 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,748 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,748 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,748 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,748 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,748 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,748 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,748 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,748 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,749 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,749 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,749 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,749 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 12:01:05] 2026-03-18 16:00:18,749 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,749 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 12:01:05] 2026-03-18 16:00:18,750 | INFO     | job 7057846445 has completed (purged errors)
[2026-03-18 12:01:05] 2026-03-18 16:00:18,750 | INFO     | overall cleanup function is called
[2026-03-18 12:01:05] 2026-03-18 16:00:19,757 | INFO     | --- collectZombieJob: --- 10, [28351]
[2026-03-18 12:01:05] 2026-03-18 16:00:19,758 | INFO     | zombie collector waiting for pid 28351
[2026-03-18 12:01:05] 2026-03-18 16:00:19,758 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 12:01:05] 2026-03-18 16:00:19,758 | INFO     | collected zombie processes
[2026-03-18 12:01:05] 2026-03-18 16:00:19,758 | INFO     | will attempt to kill all subprocesses of pid=28351
[2026-03-18 12:01:05] 2026-03-18 16:00:19,913 | INFO     | process IDs to be killed: [28351] (in reverse order)
[2026-03-18 12:01:05] 2026-03-18 16:00:19,972 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 12:01:05] 2026-03-18 16:00:19,973 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 12:01:05] 2026-03-18 16:00:19,977 | INFO     | did not find any defunct processes belonging to 28351
[2026-03-18 12:01:05] 2026-03-18 16:00:19,979 | INFO     | did not find any defunct processes belonging to 28351
[2026-03-18 12:01:05] 2026-03-18 16:00:19,979 | INFO     | ready for new job
[2026-03-18 12:01:05] 2026-03-18 16:00:19,979 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 12:01:05] 2026-03-18 16:00:19,981 | INFO     | **************************************
[2026-03-18 12:01:05] 2026-03-18 16:00:19,981 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 12:01:05] 2026-03-18 16:00:19,981 | INFO     | **************************************
[2026-03-18 12:01:05] 2026-03-18 16:00:19,982 | INFO     | 
[2026-03-18 12:01:05] 2026-03-18 16:00:19,982 | INFO     | architecture information:
[2026-03-18 12:01:05] 2026-03-18 16:00:19,983 | INFO     | executing command: cat /etc/os-release
[2026-03-18 12:01:05] 2026-03-18 16:00:19,995 | INFO     | cat /etc/os-release:
[2026-03-18 12:01:05] NAME="CentOS Linux"
[2026-03-18 12:01:05] VERSION="7 (Core)"
[2026-03-18 12:01:05] ID="centos"
[2026-03-18 12:01:05] ID_LIKE="rhel fedora"
[2026-03-18 12:01:05] VERSION_ID="7"
[2026-03-18 12:01:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 12:01:05] ANSI_COLOR="0;31"
[2026-03-18 12:01:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 12:01:05] HOME_URL="https://www.centos.org/"
[2026-03-18 12:01:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 12:01:05] 
[2026-03-18 12:01:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 12:01:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 12:01:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 12:01:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 12:01:05] 
[2026-03-18 12:01:05] 2026-03-18 16:00:19,995 | INFO     | **************************************
[2026-03-18 12:01:05] 2026-03-18 16:00:20,498 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-18 12:01:05] 2026-03-18 16:00:20,512 | INFO     | sufficient remaining disk space (28005367808 B)
[2026-03-18 12:01:05] 2026-03-18 16:00:20,513 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 12:01:05] 2026-03-18 16:00:20,513 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 12:01:05] 2026-03-18 16:00:20,513 | INFO     | update_server=False
[2026-03-18 12:01:05] 2026-03-18 16:00:20,514 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 12:01:05] 2026-03-18 16:00:20,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 12:01:05] 2026-03-18 16:00:20,514 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 12:01:05] 2026-03-18 16:00:20,551 | INFO     | all job control threads have been joined
[2026-03-18 12:01:05] 2026-03-18 16:00:21,328 | INFO     | all data control threads have been joined
[2026-03-18 12:01:05] 2026-03-18 16:00:21,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 12:01:05] 2026-03-18 16:00:21,455 | INFO     | aborting loop
[2026-03-18 12:01:05] 2026-03-18 16:00:21,515 | INFO     | [job] retrieve thread has finished
[2026-03-18 12:01:05] 2026-03-18 16:00:21,520 | INFO     | [payload] failed_post thread has finished
[2026-03-18 12:01:05] 2026-03-18 16:00:21,522 | INFO     | [job] queue monitor thread has finished
[2026-03-18 12:01:05] 2026-03-18 16:00:21,558 | INFO     | [job] control thread has finished
[2026-03-18 12:01:05] 2026-03-18 16:00:21,749 | INFO     | all payload control threads have been joined
[2026-03-18 12:01:05] 2026-03-18 16:00:21,812 | INFO     | [job] validate thread has finished
[2026-03-18 12:01:05] 2026-03-18 16:00:21,840 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 12:01:05] 2026-03-18 16:00:22,319 | INFO     | [data] copytool_in thread has finished
[2026-03-18 12:01:05] 2026-03-18 16:00:22,320 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 12:01:05] 2026-03-18 16:00:22,321 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 12:01:05] 2026-03-18 16:00:22,333 | INFO     | [data] control thread has finished
[2026-03-18 12:01:05] 2026-03-18 16:00:22,401 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 12:01:05] 2026-03-18 16:00:22,460 | INFO     | [job] job monitor thread has finished
[2026-03-18 12:01:05] 2026-03-18 16:00:22,756 | INFO     | [payload] control thread has finished
[2026-03-18 12:01:05] 2026-03-18 16:00:23,110 | INFO     | [payload] validate_post thread has finished
[2026-03-18 12:01:05] 2026-03-18 16:00:23,845 | INFO     | [data] copytool_out thread has finished
[2026-03-18 12:01:05] 2026-03-18 16:00:24,521 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 12:01:05] 2026-03-18 16:00:31,018 | INFO     | job.realtimelogging is not enabled
[2026-03-18 12:01:05] 2026-03-18 16:00:32,024 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 12:01:05] 2026-03-18 16:00:50,196 | INFO     | PID=23953 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 12:01:05] 2026-03-18 16:00:50,196 | INFO     | .. there are 3 such processes running
[2026-03-18 12:01:05] 2026-03-18 16:00:50,197 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 12:01:05] 2026-03-18 16:00:50,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 12:01:05] 2026-03-18 16:00:50,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 12:01:05] 2026-03-18 16:00:58,685 | INFO     | [monitor] cgroup control has ended
[2026-03-18 12:01:05] 2026-03-18 16:00:59,683 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139898847790912)>', '<ExcThread(monitor, started 139898250045184)>']
[2026-03-18 12:01:05] 2026-03-18 16:01:00,242 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 12:01:05] 2026-03-18 16:01:00,243 | INFO     | [monitor] control thread has ended
[2026-03-18 12:01:05] 2026-03-18 16:01:04,708 | INFO     | all workflow threads have been joined
[2026-03-18 12:01:05] 2026-03-18 16:01:04,715 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 12:01:05] 2026-03-18 16:01:04,715 | INFO     | traces error code: 0
[2026-03-18 12:01:05] 2026-03-18 16:01:04,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 12:01:05] 2026-03-18 16:01:04,813 [wrapper] ==== pilot stdout END ====
[2026-03-18 12:01:05] 2026-03-18 16:01:04,816 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 12:01:05] 2026-03-18 16:01:04,818 [wrapper] pilotpid: 23953
[2026-03-18 12:01:05] 2026-03-18 16:01:04,820 [wrapper] Pilot exit status: 0
[2026-03-18 12:01:05] 2026-03-18 16:01:04,830 [wrapper] pandaids: 7057846445
[2026-03-18 12:01:05] 2026-03-18 16:01:04,862 [wrapper] cleanup supervisor_pilot 30692 23954
[2026-03-18 12:01:05] 2026-03-18 16:01:04,864 [wrapper] Test setup, not cleaning
[2026-03-18 12:01:05] 2026-03-18 16:01:04,867 [wrapper] apfmon messages muted
[2026-03-18 12:01:05] 2026-03-18 16:01:04,872 [wrapper] ==== wrapper stdout END ====
[2026-03-18 12:01:05] 2026-03-18 16:01:04,875 [wrapper] ==== wrapper stderr END ====
[2026-03-18 12:01:05]  *** Error codes and diagnostics ***
[2026-03-18 12:01:05]     "exeErrorCode": 0,
[2026-03-18 12:01:05]     "exeErrorDiag": "",
[2026-03-18 12:01:05]     "pilotErrorCode": 0,
[2026-03-18 12:01:05]     "pilotErrorDiag": "",
[2026-03-18 12:01:05]  *** Listing of results directory ***
[2026-03-18 12:01:05] total 486920
[2026-03-18 12:01:05] -rw-r--r-- 1 boincer umatlas    585013 Mar 17 21:12 pilot3.tar.gz
[2026-03-18 12:01:05] -rwx------ 1 boincer umatlas     36322 Mar 17 21:16 runpilot2-wrapper.sh
[2026-03-18 12:01:05] -rw-r--r-- 1 boincer umatlas      5111 Mar 17 21:19 queuedata.json
[2026-03-18 12:01:05] -rw-r--r-- 1 boincer umatlas       100 Mar 18 06:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 12:01:05] -rwxr-xr-x 1 boincer umatlas      7986 Mar 18 06:12 run_atlas
[2026-03-18 12:01:05] -rw-r--r-- 1 boincer umatlas       105 Mar 18 06:12 job.xml
[2026-03-18 12:01:05] -rw-r--r-- 2 boincer umatlas 255968969 Mar 18 06:12 EVNT.49129340._000001.pool.root.1
[2026-03-18 12:01:05] -rw-r--r-- 2 boincer umatlas     15845 Mar 18 06:12 start_atlas.sh
[2026-03-18 12:01:05] drwxrwx--x 2 boincer umatlas      4096 Mar 18 06:12 shared
[2026-03-18 12:01:05] -rw-r--r-- 2 boincer umatlas    597534 Mar 18 06:12 input.tar.gz
[2026-03-18 12:01:05] -rw-r--r-- 1 boincer umatlas         0 Mar 18 06:12 boinc_lockfile
[2026-03-18 12:01:05] -rw-r--r-- 1 boincer umatlas      2591 Mar 18 06:12 pandaJob.out
[2026-03-18 12:01:05] -rw------- 1 boincer umatlas        57 Mar 18 06:12 setup.sh.local
[2026-03-18 12:01:05] -rw------- 1 boincer umatlas   1011565 Mar 18 06:12 agis_schedconf.cvmfs.json
[2026-03-18 12:01:05] -rw------- 1 boincer umatlas       445 Mar 18 06:12 workernode_map.json
[2026-03-18 12:01:05] drwx------ 5 boincer umatlas      4096 Mar 18 06:12 pilot3
[2026-03-18 12:01:05] -rw------- 1 boincer umatlas 231739309 Mar 18 11:59 HITS.49191939._000015.pool.root.1
[2026-03-18 12:01:05] -rw-r--r-- 1 boincer umatlas       531 Mar 18 11:59 boinc_task_state.xml
[2026-03-18 12:01:05] -rw------- 1 boincer umatlas      1055 Mar 18 12:00 memory_monitor_summary.json
[2026-03-18 12:01:05] -rw------- 1 boincer umatlas   1511579 Mar 18 12:00 agis_ddmendpoints.agis.ALL.json
[2026-03-18 12:01:05] -rw------- 1 boincer umatlas    561677 Mar 18 12:00 log.49191939._000015.job.log.tgz.1
[2026-03-18 12:01:05] -rw------- 1 boincer umatlas      6417 Mar 18 12:00 heartbeat.json
[2026-03-18 12:01:05] -rw-r--r-- 1 boincer umatlas      5952 Mar 18 12:00 init_data.xml
[2026-03-18 12:01:05] -rw-r--r-- 1 boincer umatlas      8192 Mar 18 12:00 boinc_mmap_file
[2026-03-18 12:01:05] -rw-r--r-- 1 boincer umatlas        29 Mar 18 12:00 wrapper_checkpoint.txt
[2026-03-18 12:01:05] -rw------- 1 boincer umatlas        95 Mar 18 12:00 pilot_heartbeat.json
[2026-03-18 12:01:05] -rw------- 1 boincer umatlas      4889 Mar 18 12:01 pilotlog.txt
[2026-03-18 12:01:05] -rw------- 1 boincer umatlas   2916381 Mar 18 12:01 log.49191939._000015.job.log.1
[2026-03-18 12:01:05] -rw------- 1 boincer umatlas       357 Mar 18 12:01 output.list
[2026-03-18 12:01:05] -rw-r--r-- 1 boincer umatlas       620 Mar 18 12:01 runtime_log
[2026-03-18 12:01:05] -rw------- 1 boincer umatlas   3491840 Mar 18 12:01 result.tar.gz
[2026-03-18 12:01:05] -rw------- 1 boincer umatlas       663 Mar 18 12:01 sCrNDm7guM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm7N1LDmZOey9n.diag
[2026-03-18 12:01:05] -rw-r--r-- 1 boincer umatlas      9342 Mar 18 12:01 runtime_log.err
[2026-03-18 12:01:05] -rw-r--r-- 1 boincer umatlas     20877 Mar 18 12:01 stderr.txt
[2026-03-18 12:01:05] HITS file was successfully produced:
[2026-03-18 12:01:05] -rw------- 1 boincer umatlas 231739309 Mar 18 11:59 shared/HITS.pool.root.1
[2026-03-18 12:01:05]  *** Contents of shared directory: ***
[2026-03-18 12:01:05] total 480296
[2026-03-18 12:01:05] -rw-r--r-- 2 boincer umatlas 255968969 Mar 18 06:12 ATLAS.root_0
[2026-03-18 12:01:05] -rw-r--r-- 2 boincer umatlas     15845 Mar 18 06:12 start_atlas.sh
[2026-03-18 12:01:05] -rw-r--r-- 2 boincer umatlas    597534 Mar 18 06:12 input.tar.gz
[2026-03-18 12:01:05] -rw------- 1 boincer umatlas 231739309 Mar 18 11:59 HITS.pool.root.1
[2026-03-18 12:01:05] -rw------- 1 boincer umatlas   3491840 Mar 18 12:01 result.tar.gz
12:01:06 (20260): run_atlas exited; CPU time 159737.250017
12:01:06 (20260): called boinc_finish(0)

</stderr_txt>
]]>

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