Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:33:58 (176700): wrapper (7.7.26015): starting
21:33:58 (176700): wrapper: running run_atlas (--nthreads 11)
[2026-03-17 21:33:58] Arguments: --nthreads 11
[2026-03-17 21:33:58] Threads: 11
[2026-03-17 21:33:58] Checking for CVMFS
[2026-03-17 21:33:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 21:33:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 21:33:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 21:34:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 21:34:00] 2.13.3.0 14328 190653 322748 157395 2 564 29352306 40960001 66923 16776704 0 1925835948 99.729 1377853079 47760 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-17 21:34:00] CVMFS is ok
[2026-03-17 21:34:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 21:34:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 21:34:00] Further information can be found at the LHC@home message board.
[2026-03-17 21:34:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 21:34:00] Checking for apptainer binary...
[2026-03-17 21:34:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 21:34:00] Running /usr/bin/apptainer --version
[2026-03-17 21:34:00] apptainer version 1.4.5-2.el9
[2026-03-17 21:34:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 21:34:01] c8-16-2.aglt2.org
[2026-03-17 21:34:01] apptainer works
[2026-03-17 21:34:01] Set ATHENA_PROC_NUMBER=11
[2026-03-17 21:34:01] Set ATHENA_CORE_NUMBER=11
[2026-03-17 21:34:01] Starting ATLAS job with PandaID=7047738861
[2026-03-17 21:34:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 23:47:59]  *** The last 200 lines of the pilot log: ***
[2026-03-17 23:47:59] 2026-03-18 03:47:07,335 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7047738861/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 23:47:59] 2026-03-18 03:47:07,336 | INFO     | extracted standard info from prmon json
[2026-03-17 23:47:59] 2026-03-18 03:47:07,336 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 23:47:59] 2026-03-18 03:47:07,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 23:47:59] 2026-03-18 03:47:07,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 23:47:59] 2026-03-18 03:47:07,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 23:47:59] 2026-03-18 03:47:07,371 | INFO     | fitting pss+swap vs Time
[2026-03-17 23:47:59] 2026-03-18 03:47:07,371 | INFO     | sum of square deviations: 665614562.3720928
[2026-03-17 23:47:59] 2026-03-18 03:47:07,371 | INFO     | sum of deviations: 28612621033.651146
[2026-03-17 23:47:59] 2026-03-18 03:47:07,371 | INFO     | mean x: 1773801701.0697675
[2026-03-17 23:47:59] 2026-03-18 03:47:07,371 | INFO     | mean y: 2595642.7054263568
[2026-03-17 23:47:59] 2026-03-18 03:47:07,371 | INFO     | intersect: -76247412591.31354
[2026-03-17 23:47:59] 2026-03-18 03:47:07,372 | INFO     | chi2: 3.4747560960165567
[2026-03-17 23:47:59] 2026-03-18 03:47:07,372 | INFO     | sum of square deviations: 591178702.3467727
[2026-03-17 23:47:59] 2026-03-18 03:47:07,372 | INFO     | sum of deviations: 35842507654.79838
[2026-03-17 23:47:59] 2026-03-18 03:47:07,372 | INFO     | mean x: 1773801548.5725806
[2026-03-17 23:47:59] 2026-03-18 03:47:07,372 | INFO     | mean y: 2609896.4112903224
[2026-03-17 23:47:59] 2026-03-18 03:47:07,372 | INFO     | intersect: -107541006493.05862
[2026-03-17 23:47:59] 2026-03-18 03:47:07,372 | INFO     | chi2: 2.805969682100382
[2026-03-17 23:47:59] 2026-03-18 03:47:07,372 | INFO     | current chi2=2.805969682100382 (change=19.247003111466384 %)
[2026-03-17 23:47:59] 2026-03-18 03:47:07,373 | INFO     | right removable region: 123
[2026-03-17 23:47:59] 2026-03-18 03:47:07,373 | INFO     | sum of square deviations: 591173212.3467727
[2026-03-17 23:47:59] 2026-03-18 03:47:07,373 | INFO     | sum of deviations: -4357640872.669354
[2026-03-17 23:47:59] 2026-03-18 03:47:07,373 | INFO     | mean x: 1773801853.5725806
[2026-03-17 23:47:59] 2026-03-18 03:47:07,373 | INFO     | mean y: 2662507.685483871
[2026-03-17 23:47:59] 2026-03-18 03:47:07,373 | INFO     | intersect: 13077665392.982805
[2026-03-17 23:47:59] 2026-03-18 03:47:07,373 | INFO     | chi2: 0.7579235662969298
[2026-03-17 23:47:59] 2026-03-18 03:47:07,373 | INFO     | current chi2=0.7579235662969298 (change=78.1877189260619 %)
[2026-03-17 23:47:59] 2026-03-18 03:47:07,373 | INFO     | sum of square deviations: 522499412.319327
[2026-03-17 23:47:59] 2026-03-18 03:47:07,374 | INFO     | sum of deviations: -5613602832.957983
[2026-03-17 23:47:59] 2026-03-18 03:47:07,374 | INFO     | mean x: 1773802006.0756302
[2026-03-17 23:47:59] 2026-03-18 03:47:07,374 | INFO     | mean y: 2665122.7731092437
[2026-03-17 23:47:59] 2026-03-18 03:47:07,400 | INFO     | intersect: 19059949651.022884
[2026-03-17 23:47:59] 2026-03-18 03:47:07,400 | INFO     | chi2: 0.7258342774074082
[2026-03-17 23:47:59] 2026-03-18 03:47:07,400 | INFO     | current chi2=0.7258342774074082 (change=4.233842344592043 %)
[2026-03-17 23:47:59] 2026-03-18 03:47:07,400 | INFO     | left removable region: 20
[2026-03-17 23:47:59] 2026-03-18 03:47:07,401 | INFO     | sum of square deviations: 338798888.21359324
[2026-03-17 23:47:59] 2026-03-18 03:47:07,401 | INFO     | sum of deviations: 1978604819.1067967
[2026-03-17 23:47:59] 2026-03-18 03:47:07,401 | INFO     | mean x: 1773802128.0873787
[2026-03-17 23:47:59] 2026-03-18 03:47:07,401 | INFO     | mean y: 2684659.5436893203
[2026-03-17 23:47:59] 2026-03-18 03:47:07,401 | INFO     | intersect: -10356420877.316704
[2026-03-17 23:47:59] 2026-03-18 03:47:07,401 | INFO     | chi2: 0.000630867029057483
[2026-03-17 23:47:59] 2026-03-18 03:47:07,401 | INFO     | current memory leak: 5.84 B/s (using 103 data points, chi2=0.00)
[2026-03-17 23:47:59] 2026-03-18 03:47:07,401 | INFO     | could have reported an average CPU frequency of 3800 MHz (8 samples)
[2026-03-17 23:47:59] 2026-03-18 03:47:07,402 | INFO     | ..............................
[2026-03-17 23:47:59] 2026-03-18 03:47:07,402 | INFO     | . Timing measurements:
[2026-03-17 23:47:59] 2026-03-18 03:47:07,402 | INFO     | . get job = 0 s
[2026-03-17 23:47:59] 2026-03-18 03:47:07,402 | INFO     | . initial setup = 32 s
[2026-03-17 23:47:59] 2026-03-18 03:47:07,402 | INFO     | . payload setup = 34 s
[2026-03-17 23:47:59] 2026-03-18 03:47:07,402 | INFO     | . stage-in = 0 s
[2026-03-17 23:47:59] 2026-03-18 03:47:07,402 | INFO     | . payload execution = 7847 s
[2026-03-17 23:47:59] 2026-03-18 03:47:07,402 | INFO     | . stage-out = 1 s
[2026-03-17 23:47:59] 2026-03-18 03:47:07,402 | INFO     | . log creation = 0 s
[2026-03-17 23:47:59] 2026-03-18 03:47:07,402 | INFO     | ..............................
[2026-03-17 23:47:59] 2026-03-18 03:47:07,587 | INFO     | 
[2026-03-17 23:47:59] 2026-03-18 03:47:07,587 | INFO     | job summary report
[2026-03-17 23:47:59] 2026-03-18 03:47:07,587 | INFO     | --------------------------------------------------
[2026-03-17 23:47:59] 2026-03-18 03:47:07,587 | INFO     | PanDA job id: 7047738861
[2026-03-17 23:47:59] 2026-03-18 03:47:07,587 | INFO     | task id: 48998032
[2026-03-17 23:47:59] 2026-03-18 03:47:07,587 | INFO     | errors: (none)
[2026-03-17 23:47:59] 2026-03-18 03:47:07,587 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 23:47:59] 2026-03-18 03:47:07,587 | INFO     | pilot state: finished 
[2026-03-17 23:47:59] 2026-03-18 03:47:07,587 | INFO     | transexitcode: 0
[2026-03-17 23:47:59] 2026-03-18 03:47:07,587 | INFO     | exeerrorcode: 0
[2026-03-17 23:47:59] 2026-03-18 03:47:07,587 | INFO     | exeerrordiag: 
[2026-03-17 23:47:59] 2026-03-18 03:47:07,587 | INFO     | exitcode: 0
[2026-03-17 23:47:59] 2026-03-18 03:47:07,587 | INFO     | exitmsg: OK
[2026-03-17 23:47:59] 2026-03-18 03:47:07,587 | INFO     | cpuconsumptiontime: 33492 s
[2026-03-17 23:47:59] 2026-03-18 03:47:07,587 | INFO     | nevents: 400
[2026-03-17 23:47:59] 2026-03-18 03:47:07,587 | INFO     | neventsw: 0
[2026-03-17 23:47:59] 2026-03-18 03:47:07,588 | INFO     | pid: 198922
[2026-03-17 23:47:59] 2026-03-18 03:47:07,588 | INFO     | pgrp: 198922
[2026-03-17 23:47:59] 2026-03-18 03:47:07,588 | INFO     | corecount: 11
[2026-03-17 23:47:59] 2026-03-18 03:47:07,588 | INFO     | event service: False
[2026-03-17 23:47:59] 2026-03-18 03:47:07,588 | INFO     | sizes: {0: 2252858, 1: 2280260, 7885: 2307799, 7888: 2316853, 7889: 2316991}
[2026-03-17 23:47:59] 2026-03-18 03:47:07,588 | INFO     | --------------------------------------------------
[2026-03-17 23:47:59] 2026-03-18 03:47:07,588 | INFO     | 
[2026-03-17 23:47:59] 2026-03-18 03:47:07,588 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-17 23:47:59] 2026-03-18 03:47:07,668 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,668 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,668 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | job 7047738861 has completed (purged errors)
[2026-03-17 23:47:59] 2026-03-18 03:47:07,669 | INFO     | overall cleanup function is called
[2026-03-17 23:47:59] 2026-03-18 03:47:08,676 | INFO     | --- collectZombieJob: --- 10, [198922]
[2026-03-17 23:47:59] 2026-03-18 03:47:08,680 | INFO     | zombie collector waiting for pid 198922
[2026-03-17 23:47:59] 2026-03-18 03:47:08,680 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 23:47:59] 2026-03-18 03:47:08,680 | INFO     | collected zombie processes
[2026-03-17 23:47:59] 2026-03-18 03:47:08,680 | INFO     | will attempt to kill all subprocesses of pid=198922
[2026-03-17 23:47:59] 2026-03-18 03:47:11,615 | INFO     | process IDs to be killed: [198922] (in reverse order)
[2026-03-17 23:47:59] 2026-03-18 03:47:12,098 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 23:47:59] 2026-03-18 03:47:12,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 23:47:59] 2026-03-18 03:47:12,215 | INFO     | did not find any defunct processes belonging to 198922
[2026-03-17 23:47:59] 2026-03-18 03:47:12,303 | INFO     | did not find any defunct processes belonging to 198922
[2026-03-17 23:47:59] 2026-03-18 03:47:12,303 | INFO     | ready for new job
[2026-03-17 23:47:59] 2026-03-18 03:47:12,303 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 23:47:59] 2026-03-18 03:47:12,305 | INFO     | **************************************
[2026-03-17 23:47:59] 2026-03-18 03:47:12,305 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-17 23:47:59] 2026-03-18 03:47:12,305 | INFO     | **************************************
[2026-03-17 23:47:59] 2026-03-18 03:47:12,305 | INFO     | 
[2026-03-17 23:47:59] 2026-03-18 03:47:12,309 | INFO     | architecture information:
[2026-03-17 23:47:59] 2026-03-18 03:47:12,320 | INFO     | executing command: cat /etc/os-release
[2026-03-17 23:47:59] 2026-03-18 03:47:12,405 | INFO     | cat /etc/os-release:
[2026-03-17 23:47:59] NAME="CentOS Linux"
[2026-03-17 23:47:59] VERSION="7 (Core)"
[2026-03-17 23:47:59] ID="centos"
[2026-03-17 23:47:59] ID_LIKE="rhel fedora"
[2026-03-17 23:47:59] VERSION_ID="7"
[2026-03-17 23:47:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 23:47:59] ANSI_COLOR="0;31"
[2026-03-17 23:47:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 23:47:59] HOME_URL="https://www.centos.org/"
[2026-03-17 23:47:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 23:47:59] 
[2026-03-17 23:47:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 23:47:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 23:47:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 23:47:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 23:47:59] 
[2026-03-17 23:47:59] 2026-03-18 03:47:12,406 | INFO     | **************************************
[2026-03-17 23:47:59] 2026-03-18 03:47:12,515 | WARNING  | process 198922 can no longer be monitored (due to stat problems) - aborting
[2026-03-17 23:47:59] 2026-03-18 03:47:12,912 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-17 23:47:59] 2026-03-18 03:47:12,982 | INFO     | sufficient remaining disk space (167873871872 B)
[2026-03-17 23:47:59] 2026-03-18 03:47:12,982 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 23:47:59] 2026-03-18 03:47:12,983 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 23:47:59] 2026-03-18 03:47:12,983 | INFO     | update_server=False
[2026-03-17 23:47:59] 2026-03-18 03:47:12,983 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 23:47:59] 2026-03-18 03:47:12,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 23:47:59] 2026-03-18 03:47:12,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 23:47:59] 2026-03-18 03:47:12,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 23:47:59] 2026-03-18 03:47:13,320 | INFO     | all data control threads have been joined
[2026-03-17 23:47:59] 2026-03-18 03:47:13,343 | INFO     | using path: /tmp/boinchome/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 23:47:59] 2026-03-18 03:47:13,349 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/3/PanDA_Pilot-7047738861/payload.stdout) since it has not been created yet
[2026-03-17 23:47:59] 2026-03-18 03:47:13,349 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-17 23:47:59] 2026-03-18 03:47:13,408 | INFO     | sufficient remaining disk space (167873871872 B)
[2026-03-17 23:47:59] 2026-03-18 03:47:13,409 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-17 23:47:59] 2026-03-18 03:47:13,409 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/3/PanDA_Pilot-7047738861/HITS.48998032._001559.pool.root.1 since it does not exist
[2026-03-17 23:47:59] 2026-03-18 03:47:13,843 | INFO     | all payload control threads have been joined
[2026-03-17 23:47:59] 2026-03-18 03:47:13,999 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 23:47:59] 2026-03-18 03:47:14,000 | INFO     | [job] queue monitor thread has finished
[2026-03-17 23:47:59] 2026-03-18 03:47:14,084 | INFO     | [job] retrieve thread has finished
[2026-03-17 23:47:59] 2026-03-18 03:47:14,361 | INFO     | [data] control thread has finished
[2026-03-17 23:47:59] 2026-03-18 03:47:14,475 | INFO     | all job control threads have been joined
[2026-03-17 23:47:59] 2026-03-18 03:47:14,585 | INFO     | [payload] validate_post thread has finished
[2026-03-17 23:47:59] 2026-03-18 03:47:14,848 | INFO     | [payload] control thread has finished
[2026-03-17 23:47:59] 2026-03-18 03:47:14,880 | INFO     | [data] copytool_in thread has finished
[2026-03-17 23:47:59] 2026-03-18 03:47:14,880 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 23:47:59] 2026-03-18 03:47:15,012 | INFO     | [data] copytool_out thread has finished
[2026-03-17 23:47:59] 2026-03-18 03:47:15,137 | INFO     | [payload] failed_post thread has finished
[2026-03-17 23:47:59] 2026-03-18 03:47:15,373 | INFO     | [job] validate thread has finished
[2026-03-17 23:47:59] 2026-03-18 03:47:15,445 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 23:47:59] 2026-03-18 03:47:15,488 | INFO     | [job] control thread has finished
[2026-03-17 23:47:59] 2026-03-18 03:47:15,818 | INFO     | number of running child processes to parent process 198922: 1
[2026-03-17 23:47:59] 2026-03-18 03:47:15,818 | INFO     | maximum number of monitored processes: 6
[2026-03-17 23:47:59] 2026-03-18 03:47:15,818 | INFO     | aborting job monitoring since job object (job id=7047738861) has expired
[2026-03-17 23:47:59] 2026-03-18 03:47:15,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 23:47:59] 2026-03-18 03:47:15,818 | INFO     | will abort loop
[2026-03-17 23:47:59] 2026-03-18 03:47:16,824 | INFO     | [job] job monitor thread has finished
[2026-03-17 23:47:59] 2026-03-18 03:47:16,999 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 23:47:59] 2026-03-18 03:47:23,844 | INFO     | job.realtimelogging is not enabled
[2026-03-17 23:47:59] 2026-03-18 03:47:24,850 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 23:47:59] 2026-03-18 03:47:42,793 | INFO     | PID=190154 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-17 23:47:59] 2026-03-18 03:47:42,800 | INFO     | .. there are 97 such processes running
[2026-03-17 23:47:59] 2026-03-18 03:47:42,801 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 23:47:59] 2026-03-18 03:47:42,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 23:47:59] 2026-03-18 03:47:42,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 23:47:59] 2026-03-18 03:47:50,915 | INFO     | [monitor] cgroup control has ended
[2026-03-17 23:47:59] 2026-03-18 03:47:53,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140362114631488)>', '<ExcThread(monitor, started 140361401886464)>']
[2026-03-17 23:47:59] 2026-03-18 03:47:53,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 23:47:59] 2026-03-18 03:47:53,872 | INFO     | [monitor] control thread has ended
[2026-03-17 23:47:59] 2026-03-18 03:47:58,037 | INFO     | all workflow threads have been joined
[2026-03-17 23:47:59] 2026-03-18 03:47:58,040 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 23:47:59] 2026-03-18 03:47:58,040 | INFO     | traces error code: 0
[2026-03-17 23:47:59] 2026-03-18 03:47:58,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 23:47:59] 2026-03-18 03:47:58,365 [wrapper] ==== pilot stdout END ====
[2026-03-17 23:47:59] 2026-03-18 03:47:58,393 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 23:47:59] 2026-03-18 03:47:58,409 [wrapper] pilotpid: 190154
[2026-03-17 23:47:59] 2026-03-18 03:47:58,534 [wrapper] Pilot exit status: 0
[2026-03-17 23:47:59] 2026-03-18 03:47:58,587 [wrapper] pandaids: 7047738861
[2026-03-17 23:47:59] 2026-03-18 03:47:58,886 [wrapper] cleanup supervisor_pilot 1232658 190155
[2026-03-17 23:47:59] 2026-03-18 03:47:58,937 [wrapper] Test setup, not cleaning
[2026-03-17 23:47:59] 2026-03-18 03:47:58,969 [wrapper] apfmon messages muted
[2026-03-17 23:47:59] 2026-03-18 03:47:59,011 [wrapper] ==== wrapper stdout END ====
[2026-03-17 23:47:59] 2026-03-18 03:47:59,061 [wrapper] ==== wrapper stderr END ====
[2026-03-17 23:47:59]  *** Error codes and diagnostics ***
[2026-03-17 23:47:59]     "exeErrorCode": 0,
[2026-03-17 23:47:59]     "exeErrorDiag": "",
[2026-03-17 23:47:59]     "pilotErrorCode": 0,
[2026-03-17 23:47:59]     "pilotErrorDiag": "",
[2026-03-17 23:47:59]  *** Listing of results directory ***
[2026-03-17 23:47:59] total 643196
[2026-03-17 23:47:59] -rwx------. 1 boincer umatlas     36322 Mar  9 16:45 runpilot2-wrapper.sh
[2026-03-17 23:47:59] -rw-r--r--. 1 boincer umatlas      5111 Mar  9 16:46 queuedata.json
[2026-03-17 23:47:59] -rw-r--r--. 1 boincer umatlas    584627 Mar  9 16:46 pilot3.tar.gz
[2026-03-17 23:47:59] -rw-r--r--. 1 boincer umatlas       100 Mar 17 21:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 23:47:59] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 17 21:33 run_atlas
[2026-03-17 23:47:59] -rw-r--r--. 1 boincer umatlas       105 Mar 17 21:33 job.xml
[2026-03-17 23:47:59] -rw-r--r--. 2 boincer umatlas 366323791 Mar 17 21:33 EVNT.48998030._000063.pool.root.1
[2026-03-17 23:47:59] -rw-r--r--. 2 boincer umatlas     15845 Mar 17 21:33 start_atlas.sh
[2026-03-17 23:47:59] drwxrwx--x. 2 boincer umatlas      4096 Mar 17 21:33 shared
[2026-03-17 23:47:59] -rw-r--r--. 2 boincer umatlas    597942 Mar 17 21:33 input.tar.gz
[2026-03-17 23:47:59] -rw-r--r--. 1 boincer umatlas         0 Mar 17 21:33 boinc_lockfile
[2026-03-17 23:47:59] -rw-r--r--. 1 boincer umatlas      2560 Mar 17 21:34 pandaJob.out
[2026-03-17 23:47:59] -rw-------. 1 boincer umatlas        57 Mar 17 21:34 setup.sh.local
[2026-03-17 23:47:59] -rw-------. 1 boincer umatlas   1011515 Mar 17 21:35 agis_schedconf.cvmfs.json
[2026-03-17 23:47:59] -rw-------. 1 boincer umatlas   1511579 Mar 17 21:35 agis_ddmendpoints.agis.ALL.json
[2026-03-17 23:47:59] -rw-------. 1 boincer umatlas       430 Mar 17 21:35 workernode_map.json
[2026-03-17 23:47:59] drwx------. 5 boincer umatlas      4096 Mar 17 21:35 pilot3
[2026-03-17 23:47:59] -rw-------. 1 boincer umatlas 285595602 Mar 17 23:46 HITS.48998032._001559.pool.root.1
[2026-03-17 23:47:59] -rw-r--r--. 1 boincer umatlas       530 Mar 17 23:46 boinc_task_state.xml
[2026-03-17 23:47:59] -rw-r--r--. 1 boincer umatlas      7169 Mar 17 23:46 init_data.xml
[2026-03-17 23:47:59] -rw-------. 1 boincer umatlas      1039 Mar 17 23:47 memory_monitor_summary.json
[2026-03-17 23:47:59] -rw-------. 1 boincer umatlas    401034 Mar 17 23:47 log.48998032._001559.job.log.tgz.1
[2026-03-17 23:47:59] -rw-------. 1 boincer umatlas      6333 Mar 17 23:47 heartbeat.json
[2026-03-17 23:47:59] -rw-------. 1 boincer umatlas        95 Mar 17 23:47 pilot_heartbeat.json
[2026-03-17 23:47:59] -rw-r--r--. 1 boincer umatlas      8192 Mar 17 23:47 boinc_mmap_file
[2026-03-17 23:47:59] -rw-r--r--. 1 boincer umatlas        27 Mar 17 23:47 wrapper_checkpoint.txt
[2026-03-17 23:47:59] -rw-------. 1 boincer umatlas      6054 Mar 17 23:47 pilotlog.txt
[2026-03-17 23:47:59] -rw-------. 1 boincer umatlas    980714 Mar 17 23:47 log.48998032._001559.job.log.1
[2026-03-17 23:47:59] -rw-------. 1 boincer umatlas       357 Mar 17 23:47 output.list
[2026-03-17 23:47:59] -rw-r--r--. 1 boincer umatlas       620 Mar 17 23:47 runtime_log
[2026-03-17 23:47:59] -rw-------. 1 boincer umatlas   1402880 Mar 17 23:47 result.tar.gz
[2026-03-17 23:47:59] -rw-r--r--. 1 boincer umatlas      9338 Mar 17 23:47 runtime_log.err
[2026-03-17 23:47:59] -rw-------. 1 boincer umatlas       651 Mar 17 23:47 6U7LDmyewJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqmdLDm9DOQLm.diag
[2026-03-17 23:47:59] -rw-r--r--. 1 boincer umatlas     21472 Mar 17 23:47 stderr.txt
[2026-03-17 23:47:59] HITS file was successfully produced:
[2026-03-17 23:47:59] -rw-------. 1 boincer umatlas 285595602 Mar 17 23:46 shared/HITS.pool.root.1
[2026-03-17 23:47:59]  *** Contents of shared directory: ***
[2026-03-17 23:47:59] total 638624
[2026-03-17 23:47:59] -rw-r--r--. 2 boincer umatlas 366323791 Mar 17 21:33 ATLAS.root_0
[2026-03-17 23:47:59] -rw-r--r--. 2 boincer umatlas     15845 Mar 17 21:33 start_atlas.sh
[2026-03-17 23:47:59] -rw-r--r--. 2 boincer umatlas    597942 Mar 17 21:33 input.tar.gz
[2026-03-17 23:47:59] -rw-------. 1 boincer umatlas 285595602 Mar 17 23:46 HITS.pool.root.1
[2026-03-17 23:47:59] -rw-------. 1 boincer umatlas   1402880 Mar 17 23:47 result.tar.gz
23:48:01 (176700): run_atlas exited; CPU time 33860.774348
23:48:01 (176700): called boinc_finish(0)

</stderr_txt>
]]>

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