Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:01:08 (4058756): wrapper (7.7.26015): starting
03:01:08 (4058756): wrapper: running run_atlas (--nthreads 12)
[2026-03-18 03:01:08] Arguments: --nthreads 12
[2026-03-18 03:01:08] Threads: 12
[2026-03-18 03:01:08] Checking for CVMFS
[2026-03-18 03:01:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 03:01:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 03:01:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 03:01:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 03:01:09] 2.11.0.0 2842615 420 74688 157398 0 229 5251222 6144000 13958 130560 0 3081863 99.853 304536 805 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-03-18 03:01:09] CVMFS is ok
[2026-03-18 03:01:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 03:01:09] Checking for apptainer binary...
[2026-03-18 03:01:09] apptainer is not installed, using version from CVMFS
[2026-03-18 03:01:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 03:01:09] radiat0r
[2026-03-18 03:01:09] apptainer works
[2026-03-18 03:01:09] Set ATHENA_PROC_NUMBER=12
[2026-03-18 03:01:09] Set ATHENA_CORE_NUMBER=12
[2026-03-18 03:01:09] Starting ATLAS job with PandaID=7041174543
[2026-03-18 03:01:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 03:49:58]  *** The last 200 lines of the pilot log: ***
[2026-03-18 03:49:58]  is_tar=False
[2026-03-18 03:49:58]  lfn=log.48955006._035556.job.log.tgz.1
[2026-03-18 03:49:58]  mtime=0
[2026-03-18 03:49:58]  protocol_id=None
[2026-03-18 03:49:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-18 03:49:58]  replicas=None
[2026-03-18 03:49:58]  scope=mc23_13p6TeV
[2026-03-18 03:49:58]  status=None
[2026-03-18 03:49:58]  status_code=0
[2026-03-18 03:49:58]  storage_token=
[2026-03-18 03:49:58]  surl=/var/lib/boinc/slots/21/PanDA_Pilot-7041174543/log.48955006._035556.job.log.tgz.1
[2026-03-18 03:49:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/cb/log.48955006._035556.job.log.tgz.1
[2026-03-18 03:49:58]  workdir=None
[2026-03-18 03:49:58] ]
[2026-03-18 03:49:58] 2026-03-18 03:49:21,595 | INFO     | transferring file log.48955006._035556.job.log.tgz.1 from /var/lib/boinc/slots/21/PanDA_Pilot-7041174543/log.48955006._035556.job.log.tgz.1 to /var/lib/boinc/slots
[2026-03-18 03:49:58] 2026-03-18 03:49:21,596 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/21/PanDA_Pilot-7041174543/log.48955006._035556.job.log.tgz.1 /var/lib/boinc/slots/21/log.48955006._035556.j
[2026-03-18 03:49:58] 2026-03-18 03:49:21,621 | INFO     | adding to output.list: log.48955006._035556.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/cb/log.48955006._035556.job.log.tg
[2026-03-18 03:49:58] 2026-03-18 03:49:21,622 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-18 03:49:58] 2026-03-18 03:49:21,622 | INFO     | summary of transferred files:
[2026-03-18 03:49:58] 2026-03-18 03:49:21,622 | INFO     |  -- lfn=log.48955006._035556.job.log.tgz.1, status_code=0, status=transferred
[2026-03-18 03:49:58] 2026-03-18 03:49:21,622 | INFO     | stage-out finished correctly
[2026-03-18 03:49:58] 2026-03-18 03:49:22,211 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-18 03:49:58] 2026-03-18 03:49:22,221 | INFO     | time since job start (2871s) is within the limit (349056.0s)
[2026-03-18 03:49:58] 2026-03-18 03:49:22,312 | INFO     | job 7041174543 has state=finished
[2026-03-18 03:49:58] 2026-03-18 03:49:22,313 | INFO     | preparing for final server update for job 7041174543 in state='finished'
[2026-03-18 03:49:58] 2026-03-18 03:49:22,313 | INFO     | reading metadata from: /var/lib/boinc/slots/21/PanDA_Pilot-7041174543/jobReport.json
[2026-03-18 03:49:58] 2026-03-18 03:49:22,316 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/21/workernode_map.json
[2026-03-18 03:49:58] 2026-03-18 03:49:22,316 | INFO     | this job has now completed (state=finished)
[2026-03-18 03:49:58] 2026-03-18 03:49:22,316 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 03:49:58] 2026-03-18 03:49:22,316 | INFO     | log transfer has been attempted: DONE
[2026-03-18 03:49:58] 2026-03-18 03:49:22,316 | INFO     | job 7041174543 has finished - writing final server update
[2026-03-18 03:49:58] 2026-03-18 03:49:22,317 | INFO     | total number of processed events: 400 (read)
[2026-03-18 03:49:58] 2026-03-18 03:49:22,383 | INFO     | using path: /var/lib/boinc/slots/21/PanDA_Pilot-7041174543/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 03:49:58] 2026-03-18 03:49:22,384 | INFO     | extracted standard info from prmon json
[2026-03-18 03:49:58] 2026-03-18 03:49:22,384 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 03:49:58] 2026-03-18 03:49:22,384 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 03:49:58] 2026-03-18 03:49:22,385 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 03:49:58] 2026-03-18 03:49:22,385 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 03:49:58] 2026-03-18 03:49:22,386 | INFO     | fitting pss+swap vs Time
[2026-03-18 03:49:58] 2026-03-18 03:49:22,386 | INFO     | sum of square deviations: 19832930.0
[2026-03-18 03:49:58] 2026-03-18 03:49:22,386 | INFO     | sum of deviations: 96004575.5
[2026-03-18 03:49:58] 2026-03-18 03:49:22,386 | INFO     | mean x: 1773804413.5
[2026-03-18 03:49:58] 2026-03-18 03:49:22,387 | INFO     | mean y: 2651500.275
[2026-03-18 03:49:58] 2026-03-18 03:49:22,387 | INFO     | intersect: -8583741924.100218
[2026-03-18 03:49:58] 2026-03-18 03:49:22,387 | INFO     | chi2: 0.0008905023654970029
[2026-03-18 03:49:58] 2026-03-18 03:49:22,387 | INFO     | current memory leak: 4.84 B/s (using 40 data points, chi2=0.00)
[2026-03-18 03:49:58] 2026-03-18 03:49:22,387 | INFO     | could have reported an average CPU frequency of 2316 MHz (5 samples)
[2026-03-18 03:49:58] 2026-03-18 03:49:22,387 | INFO     | ..............................
[2026-03-18 03:49:58] 2026-03-18 03:49:22,387 | INFO     | . Timing measurements:
[2026-03-18 03:49:58] 2026-03-18 03:49:22,388 | INFO     | . get job = 0 s
[2026-03-18 03:49:58] 2026-03-18 03:49:22,388 | INFO     | . initial setup = 8 s
[2026-03-18 03:49:58] 2026-03-18 03:49:22,388 | INFO     | . payload setup = 8 s
[2026-03-18 03:49:58] 2026-03-18 03:49:22,388 | INFO     | . stage-in = 0 s
[2026-03-18 03:49:58] 2026-03-18 03:49:22,388 | INFO     | . payload execution = 2847 s
[2026-03-18 03:49:58] 2026-03-18 03:49:22,388 | INFO     | . stage-out = 0 s
[2026-03-18 03:49:58] 2026-03-18 03:49:22,388 | INFO     | . log creation = 0 s
[2026-03-18 03:49:58] 2026-03-18 03:49:22,388 | INFO     | ..............................
[2026-03-18 03:49:58] 2026-03-18 03:49:22,478 | INFO     | 
[2026-03-18 03:49:58] 2026-03-18 03:49:22,479 | INFO     | job summary report
[2026-03-18 03:49:58] 2026-03-18 03:49:22,479 | INFO     | --------------------------------------------------
[2026-03-18 03:49:58] 2026-03-18 03:49:22,479 | INFO     | PanDA job id: 7041174543
[2026-03-18 03:49:58] 2026-03-18 03:49:22,479 | INFO     | task id: 48955006
[2026-03-18 03:49:58] 2026-03-18 03:49:22,479 | INFO     | errors: (none)
[2026-03-18 03:49:58] 2026-03-18 03:49:22,479 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 03:49:58] 2026-03-18 03:49:22,479 | INFO     | pilot state: finished 
[2026-03-18 03:49:58] 2026-03-18 03:49:22,479 | INFO     | transexitcode: 0
[2026-03-18 03:49:58] 2026-03-18 03:49:22,479 | INFO     | exeerrorcode: 0
[2026-03-18 03:49:58] 2026-03-18 03:49:22,480 | INFO     | exeerrordiag: 
[2026-03-18 03:49:58] 2026-03-18 03:49:22,480 | INFO     | exitcode: 0
[2026-03-18 03:49:58] 2026-03-18 03:49:22,480 | INFO     | exitmsg: OK
[2026-03-18 03:49:58] 2026-03-18 03:49:22,480 | INFO     | cpuconsumptiontime: 29597 s
[2026-03-18 03:49:58] 2026-03-18 03:49:22,480 | INFO     | nevents: 400
[2026-03-18 03:49:58] 2026-03-18 03:49:22,480 | INFO     | neventsw: 0
[2026-03-18 03:49:58] 2026-03-18 03:49:22,480 | INFO     | pid: 4069011
[2026-03-18 03:49:58] 2026-03-18 03:49:22,480 | INFO     | pgrp: 4069011
[2026-03-18 03:49:58] 2026-03-18 03:49:22,480 | INFO     | corecount: 12
[2026-03-18 03:49:58] 2026-03-18 03:49:22,480 | INFO     | event service: False
[2026-03-18 03:49:58] 2026-03-18 03:49:22,480 | INFO     | sizes: {0: 2279800, 1: 2280261, 12: 2280261, 2856: 2305638, 2858: 2314638, 2859: 2315048}
[2026-03-18 03:49:58] 2026-03-18 03:49:22,481 | INFO     | --------------------------------------------------
[2026-03-18 03:49:58] 2026-03-18 03:49:22,481 | INFO     | 
[2026-03-18 03:49:58] 2026-03-18 03:49:22,481 | INFO     | executing command: ls -lF /var/lib/boinc/slots/21
[2026-03-18 03:49:58] 2026-03-18 03:49:22,508 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,508 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,509 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,509 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,509 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,509 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,509 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,509 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,509 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,509 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,509 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,509 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,509 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,509 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,509 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,509 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,510 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 03:49:58] 2026-03-18 03:49:22,510 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,510 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 03:49:58] 2026-03-18 03:49:22,510 | INFO     | job 7041174543 has completed (purged errors)
[2026-03-18 03:49:58] 2026-03-18 03:49:22,510 | INFO     | overall cleanup function is called
[2026-03-18 03:49:58] 2026-03-18 03:49:23,518 | INFO     | --- collectZombieJob: --- 10, [4069011]
[2026-03-18 03:49:58] 2026-03-18 03:49:23,519 | INFO     | zombie collector waiting for pid 4069011
[2026-03-18 03:49:58] 2026-03-18 03:49:23,519 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 03:49:58] 2026-03-18 03:49:23,519 | INFO     | collected zombie processes
[2026-03-18 03:49:58] 2026-03-18 03:49:23,519 | INFO     | will attempt to kill all subprocesses of pid=4069011
[2026-03-18 03:49:58] 2026-03-18 03:49:24,709 | INFO     | PID=4063448 has CPU usage=20.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-18 03:49:58] 2026-03-18 03:49:24,710 | INFO     | .. there are 16 such processes running
[2026-03-18 03:49:58] 2026-03-18 03:49:25,217 | INFO     | process IDs to be killed: [4069011] (in reverse order)
[2026-03-18 03:49:58] 2026-03-18 03:49:25,504 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 03:49:58] 2026-03-18 03:49:25,504 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 03:49:58] 2026-03-18 03:49:25,567 | INFO     | did not find any defunct processes belonging to 4069011
[2026-03-18 03:49:58] 2026-03-18 03:49:25,624 | INFO     | did not find any defunct processes belonging to 4069011
[2026-03-18 03:49:58] 2026-03-18 03:49:25,625 | INFO     | ready for new job
[2026-03-18 03:49:58] 2026-03-18 03:49:25,625 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 03:49:58] 2026-03-18 03:49:25,628 | INFO     | **************************************
[2026-03-18 03:49:58] 2026-03-18 03:49:25,629 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-18 03:49:58] 2026-03-18 03:49:25,629 | INFO     | **************************************
[2026-03-18 03:49:58] 2026-03-18 03:49:25,629 | INFO     | 
[2026-03-18 03:49:58] 2026-03-18 03:49:25,668 | INFO     | architecture information:
[2026-03-18 03:49:58] 2026-03-18 03:49:25,669 | INFO     | executing command: cat /etc/os-release
[2026-03-18 03:49:58] 2026-03-18 03:49:25,693 | INFO     | cat /etc/os-release:
[2026-03-18 03:49:58] NAME="CentOS Linux"
[2026-03-18 03:49:58] VERSION="7 (Core)"
[2026-03-18 03:49:58] ID="centos"
[2026-03-18 03:49:58] ID_LIKE="rhel fedora"
[2026-03-18 03:49:58] VERSION_ID="7"
[2026-03-18 03:49:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 03:49:58] ANSI_COLOR="0;31"
[2026-03-18 03:49:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 03:49:58] HOME_URL="https://www.centos.org/"
[2026-03-18 03:49:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 03:49:58] 
[2026-03-18 03:49:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 03:49:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 03:49:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 03:49:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 03:49:58] 
[2026-03-18 03:49:58] 2026-03-18 03:49:25,693 | INFO     | **************************************
[2026-03-18 03:49:58] 2026-03-18 03:49:25,753 | WARNING  | process 4069011 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 03:49:58] 2026-03-18 03:49:26,194 | INFO     | executing command: df -mP /var/lib/boinc/slots/21
[2026-03-18 03:49:58] 2026-03-18 03:49:26,219 | INFO     | sufficient remaining disk space (1717394472960 B)
[2026-03-18 03:49:58] 2026-03-18 03:49:26,219 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 03:49:58] 2026-03-18 03:49:26,219 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 03:49:58] 2026-03-18 03:49:26,219 | INFO     | update_server=False
[2026-03-18 03:49:58] 2026-03-18 03:49:26,220 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 03:49:58] 2026-03-18 03:49:26,284 | INFO     | all data control threads have been joined
[2026-03-18 03:49:58] 2026-03-18 03:49:26,343 | INFO     | using path: /var/lib/boinc/slots/21/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 03:49:58] 2026-03-18 03:49:26,371 | INFO     | all payload control threads have been joined
[2026-03-18 03:49:58] 2026-03-18 03:49:26,610 | INFO     | all job control threads have been joined
[2026-03-18 03:49:58] 2026-03-18 03:49:26,902 | INFO     | number of running child processes to parent process 4069011: 1
[2026-03-18 03:49:58] 2026-03-18 03:49:26,902 | INFO     | maximum number of monitored processes: 6
[2026-03-18 03:49:58] 2026-03-18 03:49:26,902 | INFO     | aborting job monitoring since job object (job id=7041174543) has expired
[2026-03-18 03:49:58] 2026-03-18 03:49:26,902 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 03:49:58] 2026-03-18 03:49:26,903 | INFO     | will abort loop
[2026-03-18 03:49:58] 2026-03-18 03:49:27,225 | INFO     | [job] retrieve thread has finished
[2026-03-18 03:49:58] 2026-03-18 03:49:27,225 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 03:49:58] 2026-03-18 03:49:27,251 | INFO     | [payload] validate_post thread has finished
[2026-03-18 03:49:58] 2026-03-18 03:49:27,290 | INFO     | [data] control thread has finished
[2026-03-18 03:49:58] 2026-03-18 03:49:27,376 | INFO     | [payload] control thread has finished
[2026-03-18 03:49:58] 2026-03-18 03:49:27,438 | INFO     | [job] validate thread has finished
[2026-03-18 03:49:58] 2026-03-18 03:49:27,490 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 03:49:58] 2026-03-18 03:49:27,616 | INFO     | [job] control thread has finished
[2026-03-18 03:49:58] 2026-03-18 03:49:27,782 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 03:49:58] 2026-03-18 03:49:27,879 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 03:49:58] 2026-03-18 03:49:27,906 | INFO     | [job] job monitor thread has finished
[2026-03-18 03:49:58] 2026-03-18 03:49:28,183 | INFO     | [payload] failed_post thread has finished
[2026-03-18 03:49:58] 2026-03-18 03:49:28,255 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 03:49:58] 2026-03-18 03:49:28,281 | INFO     | [data] copytool_in thread has finished
[2026-03-18 03:49:58] 2026-03-18 03:49:28,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 03:49:58] 2026-03-18 03:49:28,495 | INFO     | [job] queue monitor thread has finished
[2026-03-18 03:49:58] 2026-03-18 03:49:29,231 | INFO     | [data] copytool_out thread has finished
[2026-03-18 03:49:58] 2026-03-18 03:49:32,325 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 03:49:58] 2026-03-18 03:49:35,726 | INFO     | [monitor] cgroup control has ended
[2026-03-18 03:49:58] 2026-03-18 03:49:37,093 | INFO     | job.realtimelogging is not enabled
[2026-03-18 03:49:58] 2026-03-18 03:49:38,099 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 03:49:58] 2026-03-18 03:49:39,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140176989820736)>', '<ExcThread(monitor, started 140176181421824)>']
[2026-03-18 03:49:58] 2026-03-18 03:49:44,955 | INFO     | all workflow threads have been joined
[2026-03-18 03:49:58] 2026-03-18 03:49:44,956 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 03:49:58] 2026-03-18 03:49:44,956 | INFO     | traces error code: 0
[2026-03-18 03:49:58] 2026-03-18 03:49:44,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 03:49:58] 2026-03-18 03:49:57,780 | INFO     | PID=4063448 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-18 03:49:58] 2026-03-18 03:49:57,781 | INFO     | .. there are 16 such processes running
[2026-03-18 03:49:58] 2026-03-18 03:49:57,782 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 03:49:58] 2026-03-18 03:49:57,782 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 03:49:58] 2026-03-18 03:49:57,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 03:49:58] 2026-03-18 03:49:57,782 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 03:49:58] 2026-03-18 03:49:57,782 | INFO     | [monitor] control thread has ended
[2026-03-18 03:49:58] 2026-03-18 03:49:58,009 [wrapper] ==== pilot stdout END ====
[2026-03-18 03:49:58] 2026-03-18 03:49:58,013 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 03:49:58] 2026-03-18 03:49:58,017 [wrapper] pilotpid: 4063448
[2026-03-18 03:49:58] 2026-03-18 03:49:58,020 [wrapper] Pilot exit status: 0
[2026-03-18 03:49:58] 2026-03-18 03:49:58,033 [wrapper] pandaids: 7041174543
[2026-03-18 03:49:58] 2026-03-18 03:49:58,203 [wrapper] cleanup supervisor_pilot 4172996 4063449
[2026-03-18 03:49:58] 2026-03-18 03:49:58,207 [wrapper] Test setup, not cleaning
[2026-03-18 03:49:58] 2026-03-18 03:49:58,210 [wrapper] apfmon messages muted
[2026-03-18 03:49:58] 2026-03-18 03:49:58,213 [wrapper] ==== wrapper stdout END ====
[2026-03-18 03:49:58] 2026-03-18 03:49:58,216 [wrapper] ==== wrapper stderr END ====
[2026-03-18 03:49:58]  *** Error codes and diagnostics ***
[2026-03-18 03:49:58]     "exeErrorCode": 0,
[2026-03-18 03:49:58]     "exeErrorDiag": "",
[2026-03-18 03:49:58]     "pilotErrorCode": 0,
[2026-03-18 03:49:58]     "pilotErrorDiag": "",
[2026-03-18 03:49:58]  *** Listing of results directory ***
[2026-03-18 03:49:58] total 616012
[2026-03-18 03:49:58] -rw-r--r-- 1 boinc boinc    584627 Mar  9 19:08 pilot3.tar.gz
[2026-03-18 03:49:58] -rwx------ 1 boinc boinc     36322 Mar  9 19:12 runpilot2-wrapper.sh
[2026-03-18 03:49:58] -rw-r--r-- 1 boinc boinc      5111 Mar  9 19:12 queuedata.json
[2026-03-18 03:49:58] -rw-r--r-- 1 boinc boinc       100 Mar 18 03:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 03:49:58] -rwxr-xr-x 1 boinc boinc      7986 Mar 18 03:01 run_atlas
[2026-03-18 03:49:58] -rw-r--r-- 1 boinc boinc       105 Mar 18 03:01 job.xml
[2026-03-18 03:49:58] -rw-r--r-- 2 boinc boinc 441811629 Mar 18 03:01 EVNT.46701403._000711.pool.root.1
[2026-03-18 03:49:58] -rw-r--r-- 2 boinc boinc     15845 Mar 18 03:01 start_atlas.sh
[2026-03-18 03:49:58] drwxrwx--x 2 boinc boinc      4096 Mar 18 03:01 shared
[2026-03-18 03:49:58] -rw-r--r-- 2 boinc boinc    597958 Mar 18 03:01 input.tar.gz
[2026-03-18 03:49:58] -rw-r--r-- 1 boinc boinc      9415 Mar 18 03:01 init_data.xml
[2026-03-18 03:49:58] -rw-r--r-- 1 boinc boinc         0 Mar 18 03:01 boinc_setup_complete
[2026-03-18 03:49:58] -rw-r--r-- 1 boinc boinc         0 Mar 18 03:01 boinc_lockfile
[2026-03-18 03:49:58] -rw-r--r-- 1 boinc boinc      2565 Mar 18 03:01 pandaJob.out
[2026-03-18 03:49:58] -rw------- 1 boinc boinc   1011515 Mar 18 03:01 agis_schedconf.cvmfs.json
[2026-03-18 03:49:58] -rw------- 1 boinc boinc   1511579 Mar 18 03:01 agis_ddmendpoints.agis.ALL.json
[2026-03-18 03:49:58] -rw------- 1 boinc boinc       420 Mar 18 03:01 workernode_map.json
[2026-03-18 03:49:58] drwx------ 5 boinc boinc      4096 Mar 18 03:01 pilot3
[2026-03-18 03:49:58] -rw------- 1 boinc boinc 183413440 Mar 18 03:48 HITS.48955006._035556.pool.root.1
[2026-03-18 03:49:58] -rw-r--r-- 1 boinc boinc       530 Mar 18 03:48 boinc_task_state.xml
[2026-03-18 03:49:58] -rw------- 1 boinc boinc        95 Mar 18 03:49 pilot_heartbeat.json
[2026-03-18 03:49:58] -rw------- 1 boinc boinc      1022 Mar 18 03:49 memory_monitor_summary.json
[2026-03-18 03:49:58] -rw------- 1 boinc boinc    383301 Mar 18 03:49 log.48955006._035556.job.log.tgz.1
[2026-03-18 03:49:58] -rw------- 1 boinc boinc      6285 Mar 18 03:49 heartbeat.json
[2026-03-18 03:49:58] -rw-r--r-- 1 boinc boinc      8192 Mar 18 03:49 boinc_mmap_file
[2026-03-18 03:49:58] -rw-r--r-- 1 boinc boinc        27 Mar 18 03:49 wrapper_checkpoint.txt
[2026-03-18 03:49:58] -rw------- 1 boinc boinc       824 Mar 18 03:49 pilotlog.txt
[2026-03-18 03:49:58] -rw------- 1 boinc boinc    430965 Mar 18 03:49 log.48955006._035556.job.log.1
[2026-03-18 03:49:58] -rw------- 1 boinc boinc       357 Mar 18 03:49 output.list
[2026-03-18 03:49:58] -rw-r--r-- 1 boinc boinc       620 Mar 18 03:49 runtime_log
[2026-03-18 03:49:58] -rw------- 1 boinc boinc    829440 Mar 18 03:49 result.tar.gz
[2026-03-18 03:49:58] -rw-r--r-- 1 boinc boinc      8787 Mar 18 03:49 runtime_log.err
[2026-03-18 03:49:58] -rw------- 1 boinc boinc       643 Mar 18 03:49 EWJODmyCvJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmeadLDm7fQs3n.diag
[2026-03-18 03:49:58] -rw-r--r-- 1 boinc boinc     21325 Mar 18 03:49 stderr.txt
[2026-03-18 03:49:58] HITS file was successfully produced:
[2026-03-18 03:49:58] -rw------- 1 boinc boinc 183413440 Mar 18 03:48 shared/HITS.pool.root.1
[2026-03-18 03:49:58]  *** Contents of shared directory: ***
[2026-03-18 03:49:58] total 611996
[2026-03-18 03:49:58] -rw-r--r-- 2 boinc boinc 441811629 Mar 18 03:01 ATLAS.root_0
[2026-03-18 03:49:58] -rw-r--r-- 2 boinc boinc     15845 Mar 18 03:01 start_atlas.sh
[2026-03-18 03:49:58] -rw-r--r-- 2 boinc boinc    597958 Mar 18 03:01 input.tar.gz
[2026-03-18 03:49:58] -rw------- 1 boinc boinc 183413440 Mar 18 03:48 HITS.pool.root.1
[2026-03-18 03:49:58] -rw------- 1 boinc boinc    829440 Mar 18 03:49 result.tar.gz
03:49:59 (4058756): run_atlas exited; CPU time 29783.124678
03:49:59 (4058756): called boinc_finish(0)

</stderr_txt>
]]>

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