Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:38:23 (5439): wrapper (7.7.26015): starting
04:38:23 (5439): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 04:38:23] Arguments: --nthreads 8
[2026-03-18 04:38:23] Threads: 8
[2026-03-18 04:38:23] Checking for CVMFS
[2026-03-18 04:38:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 04:38:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 04:38:24] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 04:38:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 04:38:24] 2.11.0.0 4053 226262 87056 157401 1 9 3171608 4096000 917 130560 3 14552467 99.571 14416863 450 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-18 04:38:24] CVMFS is ok
[2026-03-18 04:38:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 04:38:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 04:38:24] Further information can be found at the LHC@home message board.
[2026-03-18 04:38:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 04:38:24] Checking for apptainer binary...
[2026-03-18 04:38:24] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-18 04:38:24] apptainer is not installed, using version from CVMFS
[2026-03-18 04:38:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 04:38:24] WARNING: Environment variable TMPDIR already has value [/tmp/job_11332306/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node309
[2026-03-18 04:38:24] apptainer works
[2026-03-18 04:38:24] Set ATHENA_PROC_NUMBER=8
[2026-03-18 04:38:24] Set ATHENA_CORE_NUMBER=8
[2026-03-18 04:38:24] Starting ATLAS job with PandaID=7041691020
[2026-03-18 04:38:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11332306/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 05:23:46]  *** The last 200 lines of the pilot log: ***
[2026-03-18 05:23:46]  domain=
[2026-03-18 05:23:46]  filesize=316426
[2026-03-18 05:23:46]  filetype=log
[2026-03-18 05:23:46]  guid=f9988a8c-d80b-4b59-8d00-1caf616fa7f0
[2026-03-18 05:23:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-18 05:23:46]  is_altstaged=None
[2026-03-18 05:23:46]  is_tar=False
[2026-03-18 05:23:46]  lfn=log.48955015._011372.job.log.tgz.1
[2026-03-18 05:23:46]  mtime=0
[2026-03-18 05:23:46]  protocol_id=None
[2026-03-18 05:23:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-18 05:23:46]  replicas=None
[2026-03-18 05:23:46]  scope=mc23_13p6TeV
[2026-03-18 05:23:46]  status=None
[2026-03-18 05:23:46]  status_code=0
[2026-03-18 05:23:46]  storage_token=
[2026-03-18 05:23:46]  surl=/tmp/job_11332306/atlas/pilot/slots/0/PanDA_Pilot-7041691020/log.48955015._011372.job.log.tgz.1
[2026-03-18 05:23:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/66/log.48955015._011372.job.log.tgz.1
[2026-03-18 05:23:46]  workdir=None
[2026-03-18 05:23:46] ]
[2026-03-18 05:23:46] 2026-03-18 04:22:39,204 | INFO     | transferring file log.48955015._011372.job.log.tgz.1 from /tmp/job_11332306/atlas/pilot/slots/0/PanDA_Pilot-7041691020/log.48955015._011372.job.log.tgz.1 to /tmp/j
[2026-03-18 05:23:46] 2026-03-18 04:22:39,205 | INFO     | executing command: /usr/bin/env mv /tmp/job_11332306/atlas/pilot/slots/0/PanDA_Pilot-7041691020/log.48955015._011372.job.log.tgz.1 /tmp/job_11332306/atlas/pilot/sl
[2026-03-18 05:23:46] 2026-03-18 04:22:39,213 | INFO     | adding to output.list: log.48955015._011372.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/66/log.48955015._011372.job.log.tg
[2026-03-18 05:23:46] 2026-03-18 04:22:39,213 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-18 05:23:46] 2026-03-18 04:22:39,213 | INFO     | summary of transferred files:
[2026-03-18 05:23:46] 2026-03-18 04:22:39,213 | INFO     |  -- lfn=log.48955015._011372.job.log.tgz.1, status_code=0, status=transferred
[2026-03-18 05:23:46] 2026-03-18 04:22:39,213 | INFO     | stage-out finished correctly
[2026-03-18 05:23:46] 2026-03-18 04:22:40,685 | INFO     | time since job start (2643s) is within the limit (349056.0s)
[2026-03-18 05:23:46] 2026-03-18 04:22:40,694 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-18 05:23:46] 2026-03-18 04:22:40,847 | INFO     | monitor loop #201: job 0:7041691020 is in state 'finished'
[2026-03-18 05:23:46] 2026-03-18 04:22:40,847 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-18 05:23:46] 2026-03-18 04:22:41,803 | INFO     | job 7041691020 has state=finished
[2026-03-18 05:23:46] 2026-03-18 04:22:41,803 | INFO     | preparing for final server update for job 7041691020 in state='finished'
[2026-03-18 05:23:46] 2026-03-18 04:22:41,804 | INFO     | reading metadata from: /tmp/job_11332306/atlas/pilot/slots/0/PanDA_Pilot-7041691020/jobReport.json
[2026-03-18 05:23:46] 2026-03-18 04:22:41,805 | INFO     | added worker_node to metadata from /tmp/job_11332306/atlas/pilot/slots/0/workernode_map.json
[2026-03-18 05:23:46] 2026-03-18 04:22:41,805 | INFO     | this job has now completed (state=finished)
[2026-03-18 05:23:46] 2026-03-18 04:22:41,805 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 05:23:46] 2026-03-18 04:22:41,805 | INFO     | log transfer has been attempted: DONE
[2026-03-18 05:23:46] 2026-03-18 04:22:41,805 | INFO     | job 7041691020 has finished - writing final server update
[2026-03-18 05:23:46] 2026-03-18 04:22:41,805 | INFO     | total number of processed events: 400 (read)
[2026-03-18 05:23:46] 2026-03-18 04:22:41,823 | INFO     | using path: /tmp/job_11332306/atlas/pilot/slots/0/PanDA_Pilot-7041691020/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 05:23:46] 2026-03-18 04:22:41,824 | INFO     | extracted standard info from prmon json
[2026-03-18 05:23:46] 2026-03-18 04:22:41,824 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 05:23:46] 2026-03-18 04:22:41,824 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 05:23:46] 2026-03-18 04:22:41,824 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 05:23:46] 2026-03-18 04:22:41,824 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | fitting pss+swap vs Time
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | sum of square deviations: 14456085.0
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | sum of deviations: -2615067102.5
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | mean x: 1773806506.5
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | mean y: 2878946.0833333335
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | intersect: 320879730552.075
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | chi2: 0.07492137426106332
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | current memory leak: -180.90 B/s (using 36 data points, chi2=0.07)
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | could have reported an average CPU frequency of 2605 MHz (5 samples)
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | ..............................
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | . Timing measurements:
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | . get job = 0 s
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | . initial setup = 2 s
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | . payload setup = 3 s
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | . stage-in = 0 s
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | . payload execution = 2623 s
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | . stage-out = 0 s
[2026-03-18 05:23:46] 2026-03-18 04:22:41,825 | INFO     | . log creation = 0 s
[2026-03-18 05:23:46] 2026-03-18 04:22:41,826 | INFO     | ..............................
[2026-03-18 05:23:46] 2026-03-18 04:22:41,873 | INFO     | 
[2026-03-18 05:23:46] 2026-03-18 04:22:41,873 | INFO     | job summary report
[2026-03-18 05:23:46] 2026-03-18 04:22:41,873 | INFO     | --------------------------------------------------
[2026-03-18 05:23:46] 2026-03-18 04:22:41,873 | INFO     | PanDA job id: 7041691020
[2026-03-18 05:23:46] 2026-03-18 04:22:41,873 | INFO     | task id: 48955015
[2026-03-18 05:23:46] 2026-03-18 04:22:41,873 | INFO     | errors: (none)
[2026-03-18 05:23:46] 2026-03-18 04:22:41,873 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 05:23:46] 2026-03-18 04:22:41,873 | INFO     | pilot state: finished 
[2026-03-18 05:23:46] 2026-03-18 04:22:41,874 | INFO     | transexitcode: 0
[2026-03-18 05:23:46] 2026-03-18 04:22:41,874 | INFO     | exeerrorcode: 0
[2026-03-18 05:23:46] 2026-03-18 04:22:41,874 | INFO     | exeerrordiag: 
[2026-03-18 05:23:46] 2026-03-18 04:22:41,874 | INFO     | exitcode: 0
[2026-03-18 05:23:46] 2026-03-18 04:22:41,874 | INFO     | exitmsg: OK
[2026-03-18 05:23:46] 2026-03-18 04:22:41,874 | INFO     | cpuconsumptiontime: 18933 s
[2026-03-18 05:23:46] 2026-03-18 04:22:41,874 | INFO     | nevents: 400
[2026-03-18 05:23:46] 2026-03-18 04:22:41,874 | INFO     | neventsw: 0
[2026-03-18 05:23:46] 2026-03-18 04:22:41,874 | INFO     | pid: 16130
[2026-03-18 05:23:46] 2026-03-18 04:22:41,874 | INFO     | pgrp: 16130
[2026-03-18 05:23:46] 2026-03-18 04:22:41,874 | INFO     | corecount: 8
[2026-03-18 05:23:46] 2026-03-18 04:22:41,874 | INFO     | event service: False
[2026-03-18 05:23:46] 2026-03-18 04:22:41,874 | INFO     | sizes: {0: 2280364, 11: 2280364, 2630: 2305726, 2631: 2314754, 2632: 2314810, 2633: 2315036}
[2026-03-18 05:23:46] 2026-03-18 04:22:41,874 | INFO     | --------------------------------------------------
[2026-03-18 05:23:46] 2026-03-18 04:22:41,874 | INFO     | 
[2026-03-18 05:23:46] 2026-03-18 04:22:41,874 | INFO     | executing command: ls -lF /tmp/job_11332306/atlas/pilot/slots/0
[2026-03-18 05:23:46] 2026-03-18 04:22:41,884 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,884 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,884 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,884 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,884 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,884 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,884 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,884 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,884 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,884 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,884 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,884 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,884 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,885 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 05:23:46] 2026-03-18 04:22:41,885 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,885 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 05:23:46] 2026-03-18 04:22:41,885 | INFO     | job 7041691020 has completed (purged errors)
[2026-03-18 05:23:46] 2026-03-18 04:22:41,885 | INFO     | overall cleanup function is called
[2026-03-18 05:23:46] 2026-03-18 04:22:42,891 | INFO     | --- collectZombieJob: --- 10, [16130]
[2026-03-18 05:23:46] 2026-03-18 04:22:42,891 | INFO     | zombie collector waiting for pid 16130
[2026-03-18 05:23:46] 2026-03-18 04:22:42,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 05:23:46] 2026-03-18 04:22:42,891 | INFO     | collected zombie processes
[2026-03-18 05:23:46] 2026-03-18 04:22:42,891 | INFO     | will attempt to kill all subprocesses of pid=16130
[2026-03-18 05:23:46] 2026-03-18 04:22:42,983 | INFO     | process IDs to be killed: [16130] (in reverse order)
[2026-03-18 05:23:46] 2026-03-18 04:22:43,013 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 05:23:46] 2026-03-18 04:22:43,013 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 05:23:46] 2026-03-18 04:22:43,017 | INFO     | did not find any defunct processes belonging to 16130
[2026-03-18 05:23:46] 2026-03-18 04:22:43,019 | INFO     | did not find any defunct processes belonging to 16130
[2026-03-18 05:23:46] 2026-03-18 04:22:43,020 | INFO     | ready for new job
[2026-03-18 05:23:46] 2026-03-18 04:22:43,020 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 05:23:46] 2026-03-18 04:22:43,020 | INFO     | **************************************
[2026-03-18 05:23:46] 2026-03-18 04:22:43,020 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-18 05:23:46] 2026-03-18 04:22:43,020 | INFO     | **************************************
[2026-03-18 05:23:46] 2026-03-18 04:22:43,020 | INFO     | 
[2026-03-18 05:23:46] 2026-03-18 04:22:43,035 | INFO     | architecture information:
[2026-03-18 05:23:46] 2026-03-18 04:22:43,035 | INFO     | executing command: cat /etc/os-release
[2026-03-18 05:23:46] 2026-03-18 04:22:43,042 | INFO     | cat /etc/os-release:
[2026-03-18 05:23:46] NAME="CentOS Linux"
[2026-03-18 05:23:46] VERSION="7 (Core)"
[2026-03-18 05:23:46] ID="centos"
[2026-03-18 05:23:46] ID_LIKE="rhel fedora"
[2026-03-18 05:23:46] VERSION_ID="7"
[2026-03-18 05:23:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 05:23:46] ANSI_COLOR="0;31"
[2026-03-18 05:23:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 05:23:46] HOME_URL="https://www.centos.org/"
[2026-03-18 05:23:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 05:23:46] 
[2026-03-18 05:23:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 05:23:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 05:23:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 05:23:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 05:23:46] 
[2026-03-18 05:23:46] 2026-03-18 04:22:43,042 | INFO     | **************************************
[2026-03-18 05:23:46] 2026-03-18 04:22:43,544 | INFO     | executing command: df -mP /tmp/job_11332306/atlas/pilot/slots/0
[2026-03-18 05:23:46] 2026-03-18 04:22:43,551 | INFO     | sufficient remaining disk space (227048161280 B)
[2026-03-18 05:23:46] 2026-03-18 04:22:43,551 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 05:23:46] 2026-03-18 04:22:43,551 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 05:23:46] 2026-03-18 04:22:43,551 | INFO     | update_server=False
[2026-03-18 05:23:46] 2026-03-18 04:22:43,551 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 05:23:46] 2026-03-18 04:22:43,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 05:23:46] 2026-03-18 04:22:44,360 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 05:23:46] 2026-03-18 04:22:44,360 | INFO     | aborting loop
[2026-03-18 05:23:46] 2026-03-18 04:22:44,375 | INFO     | all data control threads have been joined
[2026-03-18 05:23:46] 2026-03-18 04:22:44,469 | INFO     | all job control threads have been joined
[2026-03-18 05:23:46] 2026-03-18 04:22:44,556 | INFO     | [job] retrieve thread has finished
[2026-03-18 05:23:46] 2026-03-18 04:22:44,556 | INFO     | [job] queue monitor thread has finished
[2026-03-18 05:23:46] 2026-03-18 04:22:44,729 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 05:23:46] 2026-03-18 04:22:44,769 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 05:23:46] 2026-03-18 04:22:44,879 | INFO     | [data] copytool_in thread has finished
[2026-03-18 05:23:46] 2026-03-18 04:22:44,990 | INFO     | all payload control threads have been joined
[2026-03-18 05:23:46] 2026-03-18 04:22:45,074 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 05:23:46] 2026-03-18 04:22:45,108 | INFO     | [payload] failed_post thread has finished
[2026-03-18 05:23:46] 2026-03-18 04:22:45,365 | INFO     | [job] job monitor thread has finished
[2026-03-18 05:23:46] 2026-03-18 04:22:45,380 | INFO     | [data] control thread has finished
[2026-03-18 05:23:46] 2026-03-18 04:22:45,474 | INFO     | [job] control thread has finished
[2026-03-18 05:23:46] 2026-03-18 04:22:45,561 | INFO     | [payload] validate_post thread has finished
[2026-03-18 05:23:46] 2026-03-18 04:22:45,682 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 05:23:46] 2026-03-18 04:22:45,803 | INFO     | [job] validate thread has finished
[2026-03-18 05:23:46] 2026-03-18 04:22:45,995 | INFO     | [payload] control thread has finished
[2026-03-18 05:23:46] 2026-03-18 04:22:46,008 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 05:23:46] 2026-03-18 04:22:46,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 05:23:46] 2026-03-18 04:22:46,774 | INFO     | [data] copytool_out thread has finished
[2026-03-18 05:23:46] 2026-03-18 04:22:50,753 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 05:23:46] 2026-03-18 04:23:13,864 | INFO     | PID=10340 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 05:23:46] 2026-03-18 04:23:13,865 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 05:23:46] 2026-03-18 04:23:13,865 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 05:23:46] 2026-03-18 04:23:13,865 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 05:23:46] 2026-03-18 04:23:34,442 [wrapper] supervise_pilot (15 min periods counter: 4)
[2026-03-18 05:23:46] 2026-03-18 04:23:41,246 | INFO     | [monitor] cgroup control has ended
[2026-03-18 05:23:46] 2026-03-18 04:23:41,767 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-03-18 05:23:46] 2026-03-18 04:23:42,002 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 05:23:46] 2026-03-18 04:23:42,003 | INFO     | [monitor] control thread has ended
[2026-03-18 05:23:46] 2026-03-18 04:23:46,792 | INFO     | all workflow threads have been joined
[2026-03-18 05:23:46] 2026-03-18 04:23:46,792 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 05:23:46] 2026-03-18 04:23:46,792 | INFO     | traces error code: 0
[2026-03-18 05:23:46] 2026-03-18 04:23:46,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 05:23:46] 2026-03-18 04:23:46,846 [wrapper] ==== pilot stdout END ====
[2026-03-18 05:23:46] 2026-03-18 04:23:46,847 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 05:23:46] 2026-03-18 04:23:46,848 [wrapper] pilotpid: 10340
[2026-03-18 05:23:46] 2026-03-18 04:23:46,849 [wrapper] Pilot exit status: 0
[2026-03-18 05:23:46] 2026-03-18 04:23:46,853 [wrapper] pandaids: 7041691020
[2026-03-18 05:23:46] 2026-03-18 04:23:46,875 [wrapper] cleanup supervisor_pilot 10507 10341
[2026-03-18 05:23:46] 2026-03-18 04:23:46,876 [wrapper] Test setup, not cleaning
[2026-03-18 05:23:46] 2026-03-18 04:23:46,878 [wrapper] apfmon messages muted
[2026-03-18 05:23:46] 2026-03-18 04:23:46,879 [wrapper] ==== wrapper stdout END ====
[2026-03-18 05:23:46] 2026-03-18 04:23:46,880 [wrapper] ==== wrapper stderr END ====
[2026-03-18 05:23:46]  *** Error codes and diagnostics ***
[2026-03-18 05:23:46]     "exeErrorCode": 0,
[2026-03-18 05:23:46]     "exeErrorDiag": "",
[2026-03-18 05:23:46]     "pilotErrorCode": 0,
[2026-03-18 05:23:46]     "pilotErrorDiag": "",
[2026-03-18 05:23:46]  *** Listing of results directory ***
[2026-03-18 05:23:47] total 619264
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user    584627 Mar 10 04:18 pilot3.tar.gz
[2026-03-18 05:23:47] -rwx------ 1 mf493845 unix-user     36322 Mar 10 04:19 runpilot2-wrapper.sh
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user      5111 Mar 10 04:20 queuedata.json
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user       100 Mar 18 02:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 05:23:47] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 18 02:45 run_atlas
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user       105 Mar 18 02:45 job.xml
[2026-03-18 05:23:47] -rw-r--r-- 2 mf493845 unix-user 443695676 Mar 18 04:38 EVNT.46701403._002278.pool.root.1
[2026-03-18 05:23:47] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 18 04:38 start_atlas.sh
[2026-03-18 05:23:47] drwxrwx--x 2 mf493845 unix-user       100 Mar 18 04:38 shared
[2026-03-18 05:23:47] -rw-r--r-- 2 mf493845 unix-user    597950 Mar 18 04:38 input.tar.gz
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user      6390 Mar 18 04:38 init_data.xml
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user         0 Mar 18 04:38 boinc_setup_complete
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user      8192 Mar 18 04:38 boinc_mmap_file
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user         0 Mar 18 04:38 boinc_lockfile
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user      2572 Mar 18 04:38 pandaJob.out
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user   1011515 Mar 18 04:38 agis_schedconf.cvmfs.json
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user   1511579 Mar 18 04:38 agis_ddmendpoints.agis.ALL.json
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user       415 Mar 18 04:38 workernode_map.json
[2026-03-18 05:23:47] drwx------ 5 mf493845 unix-user       440 Mar 18 04:38 pilot3
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user 185047182 Mar 18 05:22 HITS.48955015._011372.pool.root.1
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user      1022 Mar 18 05:22 memory_monitor_summary.json
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user    316426 Mar 18 05:22 log.48955015._011372.job.log.tgz.1
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user      6322 Mar 18 05:22 heartbeat.json
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user        95 Mar 18 05:23 pilot_heartbeat.json
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user      4756 Mar 18 05:23 pilotlog.txt
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user    418065 Mar 18 05:23 log.48955015._011372.job.log.1
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user       357 Mar 18 05:23 output.list
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user       620 Mar 18 05:23 runtime_log
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user    747520 Mar 18 05:23 result.tar.gz
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user      9219 Mar 18 05:23 runtime_log.err
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user       644 Mar 18 05:23 8bRLDmEo2J9n9Rq4apOajLDm4fhM0noT9bVooX4SDmC2bLDmhM6Qcm.diag
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user     21626 Mar 18 05:23 stderr.txt
[2026-03-18 05:23:47] HITS file was successfully produced:
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user 185047182 Mar 18 05:22 shared/HITS.pool.root.1
[2026-03-18 05:23:47]  *** Contents of shared directory: ***
[2026-03-18 05:23:47] total 615344
[2026-03-18 05:23:47] -rw-r--r-- 2 mf493845 unix-user 443695676 Mar 18 04:38 ATLAS.root_0
[2026-03-18 05:23:47] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 18 04:38 start_atlas.sh
[2026-03-18 05:23:47] -rw-r--r-- 2 mf493845 unix-user    597950 Mar 18 04:38 input.tar.gz
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user 185047182 Mar 18 05:22 HITS.pool.root.1
[2026-03-18 05:23:47] -rw------- 1 mf493845 unix-user    747520 Mar 18 05:23 result.tar.gz
05:23:48 (5439): run_atlas exited; CPU time 18964.766135
05:23:48 (5439): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN