Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:29:44 (5325): wrapper (7.7.26015): starting
18:29:44 (5325): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 18:29:44] Arguments: --nthreads 8
[2026-03-17 18:29:44] Threads: 8
[2026-03-17 18:29:44] Checking for CVMFS
[2026-03-17 18:29:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 18:29:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 18:29:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 18:29:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 18:29:44] 2.11.4.0 31920 143004 78840 157390 3 188 17761598 18432000 1833 130560 0 80868517 99.990 4719796 23745 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-17 18:29:44] CVMFS is ok
[2026-03-17 18:29:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 18:29:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 18:29:44] Further information can be found at the LHC@home message board.
[2026-03-17 18:29:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 18:29:44] Checking for apptainer binary...
[2026-03-17 18:29:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 18:29:44] Running /usr/bin/apptainer --version
[2026-03-17 18:29:44] apptainer version 1.3.2-1.el7
[2026-03-17 18:29:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 18:29:45] c-206-22.aglt2.org
[2026-03-17 18:29:45] apptainer works
[2026-03-17 18:29:45] Set ATHENA_PROC_NUMBER=8
[2026-03-17 18:29:45] Set ATHENA_CORE_NUMBER=8
[2026-03-17 18:29:45] Starting ATLAS job with PandaID=7056905685
[2026-03-17 18:29:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:47:44 (20433): wrapper (7.7.26015): starting
20:47:44 (20433): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 20:47:44] Arguments: --nthreads 8
[2026-03-17 20:47:44] Threads: 8
[2026-03-17 20:47:44] This job has been restarted, cleaning up previous attempt
[2026-03-17 20:47:44] Checking for CVMFS
[2026-03-17 20:47:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 20:47:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 20:47:45] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 20:47:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 20:47:45] 2.11.4.0 31920 143142 78036 157394 2 32 17783252 18432000 1 130560 0 80924493 99.990 4725165 23753 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-17 20:47:45] CVMFS is ok
[2026-03-17 20:47:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 20:47:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 20:47:45] Further information can be found at the LHC@home message board.
[2026-03-17 20:47:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 20:47:45] Checking for apptainer binary...
[2026-03-17 20:47:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 20:47:45] Running /usr/bin/apptainer --version
[2026-03-17 20:47:45] apptainer version 1.3.2-1.el7
[2026-03-17 20:47:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 20:47:46] c-206-22.aglt2.org
[2026-03-17 20:47:46] apptainer works
[2026-03-17 20:47:46] Set ATHENA_PROC_NUMBER=8
[2026-03-17 20:47:46] Set ATHENA_CORE_NUMBER=8
[2026-03-17 20:47:46] Starting ATLAS job with PandaID=7056905685
[2026-03-17 20:47:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 05:42:18]  *** The last 200 lines of the pilot log: ***
[2026-03-18 05:42:18] 2026-03-18 09:41:46,481 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 05:42:18] 2026-03-18 09:41:46,481 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 05:42:18] 2026-03-18 09:41:46,481 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 05:42:18] 2026-03-18 09:41:46,496 | INFO     | fitting pss+swap vs Time
[2026-03-18 05:42:18] 2026-03-18 09:41:46,497 | INFO     | sum of square deviations: 44869864550.0
[2026-03-18 05:42:18] 2026-03-18 09:41:46,507 | INFO     | sum of deviations: 151695906906.00003
[2026-03-18 05:42:18] 2026-03-18 09:41:46,507 | INFO     | mean x: 1773810884.0
[2026-03-18 05:42:18] 2026-03-18 09:41:46,507 | INFO     | mean y: 2509395.0742857144
[2026-03-18 05:42:18] 2026-03-18 09:41:46,508 | INFO     | intersect: -5994385256.307353
[2026-03-18 05:42:18] 2026-03-18 09:41:46,509 | INFO     | chi2: 1.4102839463995254
[2026-03-18 05:42:18] 2026-03-18 09:41:46,509 | INFO     | sum of square deviations: 43600036090.0
[2026-03-18 05:42:18] 2026-03-18 09:41:46,519 | INFO     | sum of deviations: 149793763883.5
[2026-03-18 05:42:18] 2026-03-18 09:41:46,520 | INFO     | mean x: 1773810731.5
[2026-03-18 05:42:18] 2026-03-18 09:41:46,520 | INFO     | mean y: 2509166.5903846156
[2026-03-18 05:42:18] 2026-03-18 09:41:46,520 | INFO     | intersect: -6091655190.059565
[2026-03-18 05:42:18] 2026-03-18 09:41:46,521 | INFO     | chi2: 1.4101646350806152
[2026-03-18 05:42:18] 2026-03-18 09:41:46,521 | INFO     | current chi2=1.4101646350806152 (change=0.008460091970470934 %)
[2026-03-18 05:42:18] 2026-03-18 09:41:46,521 | INFO     | right removable region: 519
[2026-03-18 05:42:18] 2026-03-18 09:41:46,522 | INFO     | sum of square deviations: 43600036090.0
[2026-03-18 05:42:18] 2026-03-18 09:41:46,529 | INFO     | sum of deviations: 70747758550.50002
[2026-03-18 05:42:18] 2026-03-18 09:41:46,529 | INFO     | mean x: 1773811036.5
[2026-03-18 05:42:18] 2026-03-18 09:41:46,529 | INFO     | mean y: 2519077.921153846
[2026-03-18 05:42:18] 2026-03-18 09:41:46,529 | INFO     | intersect: -2875761909.403464
[2026-03-18 05:42:18] 2026-03-18 09:41:46,530 | INFO     | chi2: 0.06334350995126205
[2026-03-18 05:42:18] 2026-03-18 09:41:46,530 | INFO     | current chi2=0.06334350995126205 (change=95.50845699456632 %)
[2026-03-18 05:42:18] 2026-03-18 09:41:46,530 | INFO     | sum of square deviations: 42354394130.0
[2026-03-18 05:42:18] 2026-03-18 09:41:46,535 | INFO     | sum of deviations: 50872885956.99998
[2026-03-18 05:42:18] 2026-03-18 09:41:46,536 | INFO     | mean x: 1773811189.0
[2026-03-18 05:42:18] 2026-03-18 09:41:46,536 | INFO     | mean y: 2521507.0019417475
[2026-03-18 05:42:18] 2026-03-18 09:41:46,536 | INFO     | intersect: -2128045962.580406
[2026-03-18 05:42:18] 2026-03-18 09:41:46,536 | INFO     | chi2: 0.011286484388363013
[2026-03-18 05:42:18] 2026-03-18 09:41:46,537 | INFO     | current chi2=0.011286484388363013 (change=82.18209821803829 %)
[2026-03-18 05:42:18] 2026-03-18 09:41:46,537 | INFO     | sum of square deviations: 41132706107.5
[2026-03-18 05:42:18] 2026-03-18 09:41:46,542 | INFO     | sum of deviations: 49690311043.000015
[2026-03-18 05:42:18] 2026-03-18 09:41:46,542 | INFO     | mean x: 1773811341.5
[2026-03-18 05:42:18] 2026-03-18 09:41:46,542 | INFO     | mean y: 2521654.274509804
[2026-03-18 05:42:18] 2026-03-18 09:41:46,542 | INFO     | intersect: -2140328783.5347533
[2026-03-18 05:42:18] 2026-03-18 09:41:46,543 | INFO     | chi2: 0.011243295593204338
[2026-03-18 05:42:18] 2026-03-18 09:41:46,543 | INFO     | current chi2=0.011243295593204338 (change=0.38265941521351504 %)
[2026-03-18 05:42:18] 2026-03-18 09:41:46,543 | INFO     | left removable region: 30
[2026-03-18 05:42:18] 2026-03-18 09:41:46,543 | INFO     | sum of square deviations: 36257944940.0
[2026-03-18 05:42:18] 2026-03-18 09:41:46,548 | INFO     | sum of deviations: 52299122504.000015
[2026-03-18 05:42:18] 2026-03-18 09:41:46,548 | INFO     | mean x: 1773811616.0
[2026-03-18 05:42:18] 2026-03-18 09:41:46,548 | INFO     | mean y: 2521031.617586912
[2026-03-18 05:42:18] 2026-03-18 09:41:46,548 | INFO     | intersect: -2556057265.0210376
[2026-03-18 05:42:18] 2026-03-18 09:41:46,549 | INFO     | chi2: 0.007945299945444018
[2026-03-18 05:42:18] 2026-03-18 09:41:46,549 | INFO     | current memory leak: 1.44 B/s (using 489 data points, chi2=0.01)
[2026-03-18 05:42:18] 2026-03-18 09:41:46,549 | INFO     | could have reported an average CPU frequency of 2466 MHz (21 samples)
[2026-03-18 05:42:18] 2026-03-18 09:41:46,550 | INFO     | ..............................
[2026-03-18 05:42:18] 2026-03-18 09:41:46,550 | INFO     | . Timing measurements:
[2026-03-18 05:42:18] 2026-03-18 09:41:46,550 | INFO     | . get job = 0 s
[2026-03-18 05:42:18] 2026-03-18 09:41:46,550 | INFO     | . initial setup = 1 s
[2026-03-18 05:42:18] 2026-03-18 09:41:46,550 | INFO     | . payload setup = 7 s
[2026-03-18 05:42:18] 2026-03-18 09:41:46,550 | INFO     | . stage-in = 0 s
[2026-03-18 05:42:18] 2026-03-18 09:41:46,550 | INFO     | . payload execution = 32001 s
[2026-03-18 05:42:18] 2026-03-18 09:41:46,550 | INFO     | . stage-out = 1 s
[2026-03-18 05:42:18] 2026-03-18 09:41:46,550 | INFO     | . log creation = 0 s
[2026-03-18 05:42:18] 2026-03-18 09:41:46,550 | INFO     | ..............................
[2026-03-18 05:42:18] 2026-03-18 09:41:46,688 | INFO     | 
[2026-03-18 05:42:18] 2026-03-18 09:41:46,689 | INFO     | job summary report
[2026-03-18 05:42:18] 2026-03-18 09:41:46,689 | INFO     | --------------------------------------------------
[2026-03-18 05:42:18] 2026-03-18 09:41:46,689 | INFO     | PanDA job id: 7056905685
[2026-03-18 05:42:18] 2026-03-18 09:41:46,689 | INFO     | task id: 49176766
[2026-03-18 05:42:18] 2026-03-18 09:41:46,689 | INFO     | errors: (none)
[2026-03-18 05:42:18] 2026-03-18 09:41:46,689 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 05:42:18] 2026-03-18 09:41:46,690 | INFO     | pilot state: finished 
[2026-03-18 05:42:18] 2026-03-18 09:41:46,690 | INFO     | transexitcode: 0
[2026-03-18 05:42:18] 2026-03-18 09:41:46,690 | INFO     | exeerrorcode: 0
[2026-03-18 05:42:18] 2026-03-18 09:41:46,690 | INFO     | exeerrordiag: 
[2026-03-18 05:42:18] 2026-03-18 09:41:46,690 | INFO     | exitcode: 0
[2026-03-18 05:42:18] 2026-03-18 09:41:46,691 | INFO     | exitmsg: OK
[2026-03-18 05:42:18] 2026-03-18 09:41:46,691 | INFO     | cpuconsumptiontime: 247490 s
[2026-03-18 05:42:18] 2026-03-18 09:41:46,691 | INFO     | nevents: 400
[2026-03-18 05:42:18] 2026-03-18 09:41:46,691 | INFO     | neventsw: 0
[2026-03-18 05:42:18] 2026-03-18 09:41:46,691 | INFO     | pid: 6957
[2026-03-18 05:42:18] 2026-03-18 09:41:46,691 | INFO     | pgrp: 6957
[2026-03-18 05:42:18] 2026-03-18 09:41:46,692 | INFO     | corecount: 8
[2026-03-18 05:42:18] 2026-03-18 09:41:46,692 | INFO     | event service: False
[2026-03-18 05:42:18] 2026-03-18 09:41:46,692 | INFO     | sizes: {0: 2280303, 11: 2280303, 32011: 2318921, 32014: 2327919, 32015: 2327975, 32016: 2328169}
[2026-03-18 05:42:18] 2026-03-18 09:41:46,692 | INFO     | --------------------------------------------------
[2026-03-18 05:42:18] 2026-03-18 09:41:46,692 | INFO     | 
[2026-03-18 05:42:18] 2026-03-18 09:41:46,692 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-18 05:42:18] 2026-03-18 09:41:46,709 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,710 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,710 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,710 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,710 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,711 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,711 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,711 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,712 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,712 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,712 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,712 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,712 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,712 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 05:42:18] 2026-03-18 09:41:46,713 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,713 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 05:42:18] 2026-03-18 09:41:46,713 | INFO     | job 7056905685 has completed (purged errors)
[2026-03-18 05:42:18] 2026-03-18 09:41:46,713 | INFO     | overall cleanup function is called
[2026-03-18 05:42:18] 2026-03-18 09:41:47,641 | WARNING  | process 6957 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 05:42:18] 2026-03-18 09:41:47,722 | INFO     | --- collectZombieJob: --- 10, [6957]
[2026-03-18 05:42:18] 2026-03-18 09:41:47,722 | INFO     | zombie collector waiting for pid 6957
[2026-03-18 05:42:18] 2026-03-18 09:41:47,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 05:42:18] 2026-03-18 09:41:47,723 | INFO     | collected zombie processes
[2026-03-18 05:42:18] 2026-03-18 09:41:47,723 | INFO     | will attempt to kill all subprocesses of pid=6957
[2026-03-18 05:42:18] 2026-03-18 09:41:47,727 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 05:42:18] 2026-03-18 09:41:47,926 | INFO     | process IDs to be killed: [6957] (in reverse order)
[2026-03-18 05:42:18] 2026-03-18 09:41:47,930 | INFO     | number of running child processes to parent process 6957: 1
[2026-03-18 05:42:18] 2026-03-18 09:41:47,931 | INFO     | maximum number of monitored processes: 6
[2026-03-18 05:42:18] 2026-03-18 09:41:47,931 | INFO     | aborting job monitoring since job object (job id=7056905685) has expired
[2026-03-18 05:42:18] 2026-03-18 09:41:47,964 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 05:42:18] 2026-03-18 09:41:47,964 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 05:42:18] 2026-03-18 09:41:47,967 | INFO     | did not find any defunct processes belonging to 6957
[2026-03-18 05:42:18] 2026-03-18 09:41:47,969 | INFO     | did not find any defunct processes belonging to 6957
[2026-03-18 05:42:18] 2026-03-18 09:41:47,969 | INFO     | ready for new job
[2026-03-18 05:42:18] 2026-03-18 09:41:47,970 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 05:42:18] 2026-03-18 09:41:47,972 | INFO     | **************************************
[2026-03-18 05:42:18] 2026-03-18 09:41:47,972 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 05:42:18] 2026-03-18 09:41:47,972 | INFO     | **************************************
[2026-03-18 05:42:18] 2026-03-18 09:41:47,972 | INFO     | 
[2026-03-18 05:42:18] 2026-03-18 09:41:47,973 | INFO     | architecture information:
[2026-03-18 05:42:18] 2026-03-18 09:41:47,973 | INFO     | executing command: cat /etc/os-release
[2026-03-18 05:42:18] 2026-03-18 09:41:47,983 | INFO     | cat /etc/os-release:
[2026-03-18 05:42:18] NAME="CentOS Linux"
[2026-03-18 05:42:18] VERSION="7 (Core)"
[2026-03-18 05:42:18] ID="centos"
[2026-03-18 05:42:18] ID_LIKE="rhel fedora"
[2026-03-18 05:42:18] VERSION_ID="7"
[2026-03-18 05:42:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 05:42:18] ANSI_COLOR="0;31"
[2026-03-18 05:42:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 05:42:18] HOME_URL="https://www.centos.org/"
[2026-03-18 05:42:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 05:42:18] 
[2026-03-18 05:42:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 05:42:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 05:42:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 05:42:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 05:42:18] 
[2026-03-18 05:42:18] 2026-03-18 09:41:47,983 | INFO     | **************************************
[2026-03-18 05:42:18] 2026-03-18 09:41:48,486 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-18 05:42:18] 2026-03-18 09:41:48,496 | INFO     | sufficient remaining disk space (27973910528 B)
[2026-03-18 05:42:18] 2026-03-18 09:41:48,497 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 05:42:18] 2026-03-18 09:41:48,497 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 05:42:18] 2026-03-18 09:41:48,497 | INFO     | update_server=False
[2026-03-18 05:42:18] 2026-03-18 09:41:48,497 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 05:42:18] 2026-03-18 09:41:48,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 05:42:18] 2026-03-18 09:41:48,498 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 05:42:18] 2026-03-18 09:41:48,498 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 05:42:18] 2026-03-18 09:41:48,498 | INFO     | will abort loop
[2026-03-18 05:42:18] 2026-03-18 09:41:49,134 | INFO     | all data control threads have been joined
[2026-03-18 05:42:18] 2026-03-18 09:41:49,238 | INFO     | all payload control threads have been joined
[2026-03-18 05:42:18] 2026-03-18 09:41:49,414 | INFO     | all job control threads have been joined
[2026-03-18 05:42:18] 2026-03-18 09:41:49,502 | INFO     | [job] retrieve thread has finished
[2026-03-18 05:42:18] 2026-03-18 09:41:49,503 | INFO     | [job] queue monitor thread has finished
[2026-03-18 05:42:18] 2026-03-18 09:41:49,504 | INFO     | [job] job monitor thread has finished
[2026-03-18 05:42:18] 2026-03-18 09:41:49,791 | INFO     | [payload] validate_post thread has finished
[2026-03-18 05:42:18] 2026-03-18 09:41:49,936 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 05:42:18] 2026-03-18 09:41:50,037 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 05:42:18] 2026-03-18 09:41:50,094 | INFO     | [payload] failed_post thread has finished
[2026-03-18 05:42:18] 2026-03-18 09:41:50,139 | INFO     | [data] control thread has finished
[2026-03-18 05:42:18] 2026-03-18 09:41:50,149 | INFO     | [data] copytool_in thread has finished
[2026-03-18 05:42:18] 2026-03-18 09:41:50,194 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 05:42:18] 2026-03-18 09:41:50,241 | INFO     | [payload] control thread has finished
[2026-03-18 05:42:18] 2026-03-18 09:41:50,419 | INFO     | [job] control thread has finished
[2026-03-18 05:42:18] 2026-03-18 09:41:50,723 | INFO     | [job] validate thread has finished
[2026-03-18 05:42:18] 2026-03-18 09:41:50,820 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 05:42:18] 2026-03-18 09:41:51,881 | INFO     | [monitor] cgroup control has ended
[2026-03-18 05:42:18] 2026-03-18 09:41:51,942 | INFO     | [data] copytool_out thread has finished
[2026-03-18 05:42:18] 2026-03-18 09:41:52,504 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 05:42:18] 2026-03-18 09:41:59,301 | INFO     | job.realtimelogging is not enabled
[2026-03-18 05:42:18] 2026-03-18 09:42:00,307 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 05:42:18] 2026-03-18 09:42:01,996 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139781083809600)>', '<ExcThread(monitor, started 139780482381568)>']
[2026-03-18 05:42:18] 2026-03-18 09:42:07,022 | INFO     | all workflow threads have been joined
[2026-03-18 05:42:18] 2026-03-18 09:42:07,022 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 05:42:18] 2026-03-18 09:42:07,022 | INFO     | traces error code: 0
[2026-03-18 05:42:18] 2026-03-18 09:42:07,022 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 05:42:18] 2026-03-18 09:42:17,467 | INFO     | 32029s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-18 05:42:18] 2026-03-18 09:42:18,602 | INFO     | PID=31832 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 05:42:18] 2026-03-18 09:42:18,602 | INFO     | .. there are 3 such processes running
[2026-03-18 05:42:18] 2026-03-18 09:42:18,602 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 05:42:18] 2026-03-18 09:42:18,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 05:42:18] 2026-03-18 09:42:18,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 05:42:18] 2026-03-18 09:42:18,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 05:42:18] 2026-03-18 09:42:18,602 | INFO     | [monitor] control thread has ended
[2026-03-18 05:42:18] 2026-03-18 09:42:18,688 [wrapper] ==== pilot stdout END ====
[2026-03-18 05:42:18] 2026-03-18 09:42:18,691 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 05:42:18] 2026-03-18 09:42:18,693 [wrapper] pilotpid: 31832
[2026-03-18 05:42:18] 2026-03-18 09:42:18,695 [wrapper] Pilot exit status: 0
[2026-03-18 05:42:18] 2026-03-18 09:42:18,702 [wrapper] pandaids: 7056905685 7056905685
[2026-03-18 05:42:18] 2026-03-18 09:42:18,727 [wrapper] cleanup supervisor_pilot 17224 31834
[2026-03-18 05:42:18] 2026-03-18 09:42:18,729 [wrapper] Test setup, not cleaning
[2026-03-18 05:42:18] 2026-03-18 09:42:18,732 [wrapper] apfmon messages muted
[2026-03-18 05:42:18] 2026-03-18 09:42:18,733 [wrapper] ==== wrapper stdout END ====
[2026-03-18 05:42:18] 2026-03-18 09:42:18,735 [wrapper] ==== wrapper stderr END ====
[2026-03-18 05:42:18]  *** Error codes and diagnostics ***
[2026-03-18 05:42:18]     "exeErrorCode": 0,
[2026-03-18 05:42:18]     "exeErrorDiag": "",
[2026-03-18 05:42:18]     "pilotErrorCode": 0,
[2026-03-18 05:42:18]     "pilotErrorDiag": "",
[2026-03-18 05:42:18]  *** Listing of results directory ***
[2026-03-18 05:42:18] total 730832
[2026-03-18 05:42:18] drwx------ 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-18 05:42:18] -rwx------ 1 boincer umatlas     36322 Mar 16 09:14 runpilot2-wrapper.sh
[2026-03-18 05:42:18] -rw-r--r-- 1 boincer umatlas    585013 Mar 16 09:19 pilot3.tar.gz
[2026-03-18 05:42:18] -rw-r--r-- 1 boincer umatlas      5111 Mar 16 09:25 queuedata.json
[2026-03-18 05:42:18] -rw-r--r-- 1 boincer umatlas       100 Mar 17 18:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 05:42:18] -rwxr-xr-x 1 boincer umatlas      7986 Mar 17 18:29 run_atlas
[2026-03-18 05:42:18] -rw-r--r-- 1 boincer umatlas       105 Mar 17 18:29 job.xml
[2026-03-18 05:42:18] -rw-r--r-- 3 boincer umatlas 244349578 Mar 17 18:29 EVNT.49135151._000002.pool.root.1
[2026-03-18 05:42:18] -rw-r--r-- 3 boincer umatlas 244349578 Mar 17 18:29 ATLAS.root_0
[2026-03-18 05:42:18] -rw-r--r-- 2 boincer umatlas     15845 Mar 17 18:29 start_atlas.sh
[2026-03-18 05:42:18] drwxrwx--x 2 boincer umatlas      4096 Mar 17 18:29 shared
[2026-03-18 05:42:18] -rw-r--r-- 2 boincer umatlas    597538 Mar 17 18:29 input.tar.gz
[2026-03-18 05:42:18] -rw-r--r-- 1 boincer umatlas         0 Mar 17 18:29 boinc_lockfile
[2026-03-18 05:42:18] -rw-r--r-- 1 boincer umatlas      2616 Mar 17 20:47 pandaJob.out
[2026-03-18 05:42:18] -rw------- 1 boincer umatlas        57 Mar 17 20:47 setup.sh.local
[2026-03-18 05:42:18] -rw------- 1 boincer umatlas   1011515 Mar 17 20:47 agis_schedconf.cvmfs.json
[2026-03-18 05:42:18] -rw------- 1 boincer umatlas       445 Mar 17 20:47 workernode_map.json
[2026-03-18 05:42:18] -rw-r--r-- 1 boincer umatlas      5953 Mar 18 05:36 init_data.xml
[2026-03-18 05:42:18] -rw------- 1 boincer umatlas 245485417 Mar 18 05:41 HITS.49176766._000029.pool.root.1
[2026-03-18 05:42:18] -rw-r--r-- 1 boincer umatlas       531 Mar 18 05:41 boinc_task_state.xml
[2026-03-18 05:42:18] -rw------- 1 boincer umatlas        96 Mar 18 05:41 pilot_heartbeat.json
[2026-03-18 05:42:18] -rw------- 1 boincer umatlas      1049 Mar 18 05:41 memory_monitor_summary.json
[2026-03-18 05:42:18] -rw------- 1 boincer umatlas   1511579 Mar 18 05:41 agis_ddmendpoints.agis.ALL.json
[2026-03-18 05:42:18] -rw------- 1 boincer umatlas    697021 Mar 18 05:41 log.49176766._000029.job.log.tgz.1
[2026-03-18 05:42:18] -rw------- 1 boincer umatlas      6415 Mar 18 05:41 heartbeat.json
[2026-03-18 05:42:18] -rw-r--r-- 1 boincer umatlas        29 Mar 18 05:41 wrapper_checkpoint.txt
[2026-03-18 05:42:18] -rw-r--r-- 1 boincer umatlas      8192 Mar 18 05:41 boinc_mmap_file
[2026-03-18 05:42:18] -rw------- 1 boincer umatlas       936 Mar 18 05:42 pilotlog.txt
[2026-03-18 05:42:18] -rw------- 1 boincer umatlas   4429364 Mar 18 05:42 log.49176766._000029.job.log.1
[2026-03-18 05:42:18] -rw------- 1 boincer umatlas       357 Mar 18 05:42 output.list
[2026-03-18 05:42:18] -rw-r--r-- 1 boincer umatlas       620 Mar 18 05:42 runtime_log
[2026-03-18 05:42:18] -rw------- 1 boincer umatlas   5140480 Mar 18 05:42 result.tar.gz
[2026-03-18 05:42:18] -rw-r--r-- 1 boincer umatlas      9427 Mar 18 05:42 runtime_log.err
[2026-03-18 05:42:18] -rw------- 1 boincer umatlas       787 Mar 18 05:42 IjzLDmHxMM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmHVtLDmSkZvxn.diag
[2026-03-18 05:42:18] -rw-r--r-- 1 boincer umatlas     23234 Mar 18 05:42 stderr.txt
[2026-03-18 05:42:18] HITS file was successfully produced:
[2026-03-18 05:42:18] -rw------- 1 boincer umatlas 245485417 Mar 18 05:41 shared/HITS.pool.root.1
[2026-03-18 05:42:18]  *** Contents of shared directory: ***
[2026-03-18 05:42:18] total 483980
[2026-03-18 05:42:18] -rw-r--r-- 3 boincer umatlas 244349578 Mar 17 18:29 ATLAS.root_0
[2026-03-18 05:42:18] -rw-r--r-- 2 boincer umatlas     15845 Mar 17 18:29 start_atlas.sh
[2026-03-18 05:42:18] -rw-r--r-- 2 boincer umatlas    597538 Mar 17 18:29 input.tar.gz
[2026-03-18 05:42:18] -rw------- 1 boincer umatlas 245485417 Mar 18 05:41 HITS.pool.root.1
[2026-03-18 05:42:18] -rw------- 1 boincer umatlas   5140480 Mar 18 05:42 result.tar.gz
05:42:20 (20433): run_atlas exited; CPU time 247964.736397
05:42:20 (20433): called boinc_finish(0)

</stderr_txt>
]]>

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