Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:24:12 (10947): wrapper (7.7.26015): starting
00:24:12 (10947): wrapper: running run_atlas (--nthreads 8)
[2026-03-19 00:24:12] Arguments: --nthreads 8
[2026-03-19 00:24:12] Threads: 8
[2026-03-19 00:24:12] Checking for CVMFS
[2026-03-19 00:24:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 00:24:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 00:24:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 00:24:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 00:24:16] 2.11.2.0 6904 133992 136504 157434 0 156 20606313 25165825 4553 130560 164 44847803 99.829 32080241 1080 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-19 00:24:16] CVMFS is ok
[2026-03-19 00:24:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 00:24:16] Checking for apptainer binary...
[2026-03-19 00:24:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 00:24:16] Running /usr/bin/apptainer --version
[2026-03-19 00:24:16] apptainer version 1.3.2-1.el7
[2026-03-19 00:24:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 00:24:27] cg-vwn474.simple-grid.lan
[2026-03-19 00:24:27] apptainer works
[2026-03-19 00:24:28] Set ATHENA_PROC_NUMBER=8
[2026-03-19 00:24:28] Set ATHENA_CORE_NUMBER=8
[2026-03-19 00:24:28] Starting ATLAS job with PandaID=7057534454
[2026-03-19 00:24:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 10:48:47]  *** The last 200 lines of the pilot log: ***
[2026-03-19 10:48:47] 2026-03-19 09:47:41,016 | INFO     | extracted standard info from prmon json
[2026-03-19 10:48:47] 2026-03-19 09:47:41,016 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 10:48:47] 2026-03-19 09:47:41,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 10:48:47] 2026-03-19 09:47:41,017 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 10:48:47] 2026-03-19 09:47:41,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 10:48:47] 2026-03-19 09:47:41,028 | INFO     | fitting pss+swap vs Time
[2026-03-19 10:48:47] 2026-03-19 09:47:41,029 | INFO     | sum of square deviations: 67987514742.0
[2026-03-19 10:48:47] 2026-03-19 09:47:41,044 | INFO     | sum of deviations: 262970992558.00003
[2026-03-19 10:48:47] 2026-03-19 09:47:41,044 | INFO     | mean x: 1773895229.0
[2026-03-19 10:48:47] 2026-03-19 09:47:41,044 | INFO     | mean y: 2496081.6036484246
[2026-03-19 10:48:47] 2026-03-19 09:47:41,044 | INFO     | intersect: -6858807656.799603
[2026-03-19 10:48:47] 2026-03-19 09:47:41,045 | INFO     | chi2: 7.56185942785379
[2026-03-19 10:48:47] 2026-03-19 09:47:41,046 | INFO     | sum of square deviations: 66310264689.5
[2026-03-19 10:48:47] 2026-03-19 09:47:41,057 | INFO     | sum of deviations: 301192277306.5
[2026-03-19 10:48:47] 2026-03-19 09:47:41,057 | INFO     | mean x: 1773895076.5
[2026-03-19 10:48:47] 2026-03-19 09:47:41,057 | INFO     | mean y: 2499532.001672241
[2026-03-19 10:48:47] 2026-03-19 09:47:41,057 | INFO     | intersect: -8054827644.953858
[2026-03-19 10:48:47] 2026-03-19 09:47:41,058 | INFO     | chi2: 6.810260704991628
[2026-03-19 10:48:47] 2026-03-19 09:47:41,058 | INFO     | current chi2=6.810260704991628 (change=9.93933740812054 %)
[2026-03-19 10:48:47] 2026-03-19 09:47:41,058 | INFO     | right removable region: 597
[2026-03-19 10:48:47] 2026-03-19 09:47:41,059 | INFO     | sum of square deviations: 66310264689.5
[2026-03-19 10:48:47] 2026-03-19 09:47:41,085 | INFO     | sum of deviations: 41000493853.500015
[2026-03-19 10:48:47] 2026-03-19 09:47:41,085 | INFO     | mean x: 1773895381.5
[2026-03-19 10:48:47] 2026-03-19 09:47:41,085 | INFO     | mean y: 2516260.1755852844
[2026-03-19 10:48:47] 2026-03-19 09:47:41,085 | INFO     | intersect: -1094306185.4368126
[2026-03-19 10:48:47] 2026-03-19 09:47:41,086 | INFO     | chi2: 2.6359676024086296
[2026-03-19 10:48:47] 2026-03-19 09:47:41,086 | INFO     | current chi2=2.6359676024086296 (change=65.14127738609959 %)
[2026-03-19 10:48:47] 2026-03-19 09:47:41,087 | INFO     | sum of square deviations: 64660829112.0
[2026-03-19 10:48:47] 2026-03-19 09:47:41,098 | INFO     | sum of deviations: -76315812046.00003
[2026-03-19 10:48:47] 2026-03-19 09:47:41,098 | INFO     | mean x: 1773895534.0
[2026-03-19 10:48:47] 2026-03-19 09:47:41,098 | INFO     | mean y: 2527082.7588532884
[2026-03-19 10:48:47] 2026-03-19 09:47:41,099 | INFO     | intersect: 2096163678.8423266
[2026-03-19 10:48:47] 2026-03-19 09:47:41,099 | INFO     | chi2: 1.0068402195562287
[2026-03-19 10:48:47] 2026-03-19 09:47:41,100 | INFO     | current chi2=1.0068402195562287 (change=61.80377108443127 %)
[2026-03-19 10:48:47] 2026-03-19 09:47:41,100 | INFO     | sum of square deviations: 63038975447.0
[2026-03-19 10:48:47] 2026-03-19 09:47:41,111 | INFO     | sum of deviations: -88879161504.5
[2026-03-19 10:48:47] 2026-03-19 09:47:41,111 | INFO     | mean x: 1773895686.5
[2026-03-19 10:48:47] 2026-03-19 09:47:41,111 | INFO     | mean y: 2528262.0561224488
[2026-03-19 10:48:47] 2026-03-19 09:47:41,112 | INFO     | intersect: 2503558142.294642
[2026-03-19 10:48:47] 2026-03-19 09:47:41,112 | INFO     | chi2: 0.9838152212812145
[2026-03-19 10:48:47] 2026-03-19 09:47:41,113 | INFO     | current chi2=0.9838152212812145 (change=2.2868572220091354 %)
[2026-03-19 10:48:47] 2026-03-19 09:47:41,113 | INFO     | left removable region: 30
[2026-03-19 10:48:47] 2026-03-19 09:47:41,114 | INFO     | sum of square deviations: 56523136068.0
[2026-03-19 10:48:47] 2026-03-19 09:47:41,123 | INFO     | sum of deviations: -1031036395.9999956
[2026-03-19 10:48:47] 2026-03-19 09:47:41,124 | INFO     | mean x: 1773895961.0
[2026-03-19 10:48:47] 2026-03-19 09:47:41,124 | INFO     | mean y: 2527322.7566137565
[2026-03-19 10:48:47] 2026-03-19 09:47:41,124 | INFO     | intersect: 34884892.16514894
[2026-03-19 10:48:47] 2026-03-19 09:47:41,125 | INFO     | chi2: 0.11470472801947523
[2026-03-19 10:48:47] 2026-03-19 09:47:41,125 | INFO     | current memory leak: -0.02 B/s (using 567 data points, chi2=0.11)
[2026-03-19 10:48:47] 2026-03-19 09:47:41,126 | INFO     | could have reported an average CPU frequency of 2249 MHz (24 samples)
[2026-03-19 10:48:47] 2026-03-19 09:47:41,126 | INFO     | ..............................
[2026-03-19 10:48:47] 2026-03-19 09:47:41,126 | INFO     | . Timing measurements:
[2026-03-19 10:48:47] 2026-03-19 09:47:41,126 | INFO     | . get job = 0 s
[2026-03-19 10:48:47] 2026-03-19 09:47:41,126 | INFO     | . initial setup = 105 s
[2026-03-19 10:48:47] 2026-03-19 09:47:41,127 | INFO     | . payload setup = 182 s
[2026-03-19 10:48:47] 2026-03-19 09:47:41,127 | INFO     | . stage-in = 0 s
[2026-03-19 10:48:47] 2026-03-19 09:47:41,127 | INFO     | . payload execution = 36893 s
[2026-03-19 10:48:47] 2026-03-19 09:47:41,127 | INFO     | . stage-out = 4 s
[2026-03-19 10:48:47] 2026-03-19 09:47:41,127 | INFO     | . log creation = 2 s
[2026-03-19 10:48:47] 2026-03-19 09:47:41,127 | INFO     | ..............................
[2026-03-19 10:48:47] 2026-03-19 09:47:41,268 | INFO     | 
[2026-03-19 10:48:47] 2026-03-19 09:47:41,268 | INFO     | job summary report
[2026-03-19 10:48:47] 2026-03-19 09:47:41,268 | INFO     | --------------------------------------------------
[2026-03-19 10:48:47] 2026-03-19 09:47:41,269 | INFO     | PanDA job id: 7057534454
[2026-03-19 10:48:47] 2026-03-19 09:47:41,269 | INFO     | task id: 49182524
[2026-03-19 10:48:47] 2026-03-19 09:47:41,269 | INFO     | errors: (none)
[2026-03-19 10:48:47] 2026-03-19 09:47:41,269 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 10:48:47] 2026-03-19 09:47:41,269 | INFO     | pilot state: finished 
[2026-03-19 10:48:47] 2026-03-19 09:47:41,269 | INFO     | transexitcode: 0
[2026-03-19 10:48:47] 2026-03-19 09:47:41,269 | INFO     | exeerrorcode: 0
[2026-03-19 10:48:47] 2026-03-19 09:47:41,269 | INFO     | exeerrordiag: 
[2026-03-19 10:48:47] 2026-03-19 09:47:41,269 | INFO     | exitcode: 0
[2026-03-19 10:48:47] 2026-03-19 09:47:41,269 | INFO     | exitmsg: OK
[2026-03-19 10:48:47] 2026-03-19 09:47:41,269 | INFO     | cpuconsumptiontime: 143138 s
[2026-03-19 10:48:47] 2026-03-19 09:47:41,269 | INFO     | nevents: 400
[2026-03-19 10:48:47] 2026-03-19 09:47:41,270 | INFO     | neventsw: 0
[2026-03-19 10:48:47] 2026-03-19 09:47:41,270 | INFO     | pid: 19529
[2026-03-19 10:48:47] 2026-03-19 09:47:41,270 | INFO     | pgrp: 19529
[2026-03-19 10:48:47] 2026-03-19 09:47:41,270 | INFO     | corecount: 8
[2026-03-19 10:48:47] 2026-03-19 09:47:41,270 | INFO     | event service: False
[2026-03-19 10:48:47] 2026-03-19 09:47:41,270 | INFO     | sizes: {0: 2279808, 1: 2280325, 2: 2280325, 37079: 2321039, 37084: 2330037, 37086: 2330093, 37087: 2330415}
[2026-03-19 10:48:47] 2026-03-19 09:47:41,270 | INFO     | --------------------------------------------------
[2026-03-19 10:48:47] 2026-03-19 09:47:41,270 | INFO     | 
[2026-03-19 10:48:47] 2026-03-19 09:47:41,270 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-19 10:48:47] 2026-03-19 09:47:41,483 | INFO     | time since job start (37089s) is within the limit (345600.0s)
[2026-03-19 10:48:47] 2026-03-19 09:47:41,758 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,759 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,759 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,759 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,759 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,759 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,759 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,759 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,759 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,759 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,760 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 10:48:47] 2026-03-19 09:47:41,760 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,760 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 10:48:47] 2026-03-19 09:47:41,761 | INFO     | job 7057534454 has completed (purged errors)
[2026-03-19 10:48:47] 2026-03-19 09:47:41,761 | INFO     | overall cleanup function is called
[2026-03-19 10:48:47] 2026-03-19 09:47:42,645 | INFO     | PID=14991 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-19 10:48:47] 2026-03-19 09:47:42,645 | INFO     | .. there are 9 such processes running
[2026-03-19 10:48:47] 2026-03-19 09:47:42,769 | INFO     | --- collectZombieJob: --- 10, [19529]
[2026-03-19 10:48:47] 2026-03-19 09:47:42,769 | INFO     | zombie collector waiting for pid 19529
[2026-03-19 10:48:47] 2026-03-19 09:47:42,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 10:48:47] 2026-03-19 09:47:42,770 | INFO     | collected zombie processes
[2026-03-19 10:48:47] 2026-03-19 09:47:42,770 | INFO     | will attempt to kill all subprocesses of pid=19529
[2026-03-19 10:48:47] 2026-03-19 09:47:42,894 | INFO     | process IDs to be killed: [19529] (in reverse order)
[2026-03-19 10:48:47] 2026-03-19 09:47:43,677 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 10:48:47] 2026-03-19 09:47:43,677 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 10:48:47] 2026-03-19 09:47:43,680 | INFO     | did not find any defunct processes belonging to 19529
[2026-03-19 10:48:47] 2026-03-19 09:47:43,683 | INFO     | did not find any defunct processes belonging to 19529
[2026-03-19 10:48:47] 2026-03-19 09:47:43,683 | INFO     | ready for new job
[2026-03-19 10:48:47] 2026-03-19 09:47:43,683 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 10:48:47] 2026-03-19 09:47:43,686 | INFO     | **************************************
[2026-03-19 10:48:47] 2026-03-19 09:47:43,687 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 10:48:47] 2026-03-19 09:47:43,687 | INFO     | **************************************
[2026-03-19 10:48:47] 2026-03-19 09:47:43,687 | INFO     | 
[2026-03-19 10:48:47] 2026-03-19 09:47:43,687 | INFO     | pilot is running in a VM
[2026-03-19 10:48:47] 2026-03-19 09:47:43,687 | INFO     | architecture information:
[2026-03-19 10:48:47] 2026-03-19 09:47:43,688 | INFO     | executing command: cat /etc/os-release
[2026-03-19 10:48:47] 2026-03-19 09:47:43,971 | INFO     | cat /etc/os-release:
[2026-03-19 10:48:47] NAME="CentOS Linux"
[2026-03-19 10:48:47] VERSION="7 (Core)"
[2026-03-19 10:48:47] ID="centos"
[2026-03-19 10:48:47] ID_LIKE="rhel fedora"
[2026-03-19 10:48:47] VERSION_ID="7"
[2026-03-19 10:48:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 10:48:47] ANSI_COLOR="0;31"
[2026-03-19 10:48:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 10:48:47] HOME_URL="https://www.centos.org/"
[2026-03-19 10:48:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 10:48:47] 
[2026-03-19 10:48:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 10:48:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 10:48:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 10:48:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 10:48:47] 
[2026-03-19 10:48:47] 2026-03-19 09:47:43,971 | INFO     | **************************************
[2026-03-19 10:48:47] 2026-03-19 09:47:44,474 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-19 10:48:47] 2026-03-19 09:47:44,676 | INFO     | sufficient remaining disk space (495878930432 B)
[2026-03-19 10:48:47] 2026-03-19 09:47:44,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 10:48:47] 2026-03-19 09:47:44,676 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 10:48:47] 2026-03-19 09:47:44,677 | INFO     | update_server=False
[2026-03-19 10:48:47] 2026-03-19 09:47:44,677 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 10:48:47] 2026-03-19 09:47:44,678 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 10:48:47] 2026-03-19 09:47:45,056 | INFO     | all job control threads have been joined
[2026-03-19 10:48:47] 2026-03-19 09:47:45,213 | INFO     | all payload control threads have been joined
[2026-03-19 10:48:47] 2026-03-19 09:47:45,291 | INFO     | all data control threads have been joined
[2026-03-19 10:48:47] 2026-03-19 09:47:45,606 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 10:48:47] 2026-03-19 09:47:45,606 | INFO     | aborting loop
[2026-03-19 10:48:47] 2026-03-19 09:47:45,682 | INFO     | [job] retrieve thread has finished
[2026-03-19 10:48:47] 2026-03-19 09:47:46,062 | INFO     | [job] control thread has finished
[2026-03-19 10:48:47] 2026-03-19 09:47:46,091 | INFO     | [job] validate thread has finished
[2026-03-19 10:48:47] 2026-03-19 09:47:46,219 | INFO     | [payload] control thread has finished
[2026-03-19 10:48:47] 2026-03-19 09:47:46,221 | INFO     | [data] copytool_in thread has finished
[2026-03-19 10:48:47] 2026-03-19 09:47:46,254 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 10:48:47] 2026-03-19 09:47:46,297 | INFO     | [data] control thread has finished
[2026-03-19 10:48:47] 2026-03-19 09:47:46,360 | INFO     | [payload] failed_post thread has finished
[2026-03-19 10:48:47] 2026-03-19 09:47:46,361 | INFO     | [payload] validate_post thread has finished
[2026-03-19 10:48:47] 2026-03-19 09:47:46,471 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 10:48:47] 2026-03-19 09:47:46,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 10:48:47] 2026-03-19 09:47:46,612 | INFO     | [job] job monitor thread has finished
[2026-03-19 10:48:47] 2026-03-19 09:47:46,685 | INFO     | [data] copytool_out thread has finished
[2026-03-19 10:48:47] 2026-03-19 09:47:46,755 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 10:48:47] 2026-03-19 09:47:46,765 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 10:48:47] 2026-03-19 09:47:47,260 | INFO     | [job] queue monitor thread has finished
[2026-03-19 10:48:47] 2026-03-19 09:47:50,596 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 10:48:47] 2026-03-19 09:47:55,617 | INFO     | job.realtimelogging is not enabled
[2026-03-19 10:48:47] 2026-03-19 09:47:56,623 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 10:48:47] 2026-03-19 09:48:14,799 | INFO     | PID=14991 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-19 10:48:47] 2026-03-19 09:48:14,799 | INFO     | .. there are 9 such processes running
[2026-03-19 10:48:47] 2026-03-19 09:48:14,800 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 10:48:47] 2026-03-19 09:48:14,800 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 10:48:47] 2026-03-19 09:48:14,800 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 10:48:47] 2026-03-19 09:48:35,977 | INFO     | [monitor] cgroup control has ended
[2026-03-19 10:48:47] 2026-03-19 09:48:38,003 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140606257399616)>', '<ExcThread(monitor, started 140605535540992)>']
[2026-03-19 10:48:47] 2026-03-19 09:48:38,945 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 10:48:47] 2026-03-19 09:48:38,945 | INFO     | [monitor] control thread has ended
[2026-03-19 10:48:47] 2026-03-19 09:48:43,029 | INFO     | all workflow threads have been joined
[2026-03-19 10:48:47] 2026-03-19 09:48:43,029 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 10:48:47] 2026-03-19 09:48:43,030 | INFO     | traces error code: 0
[2026-03-19 10:48:47] 2026-03-19 09:48:43,030 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 10:48:47] 2026-03-19 09:48:43,360 [wrapper] ==== pilot stdout END ====
[2026-03-19 10:48:47] 2026-03-19 09:48:43,413 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 10:48:47] 2026-03-19 09:48:43,474 [wrapper] pilotpid: 14991
[2026-03-19 10:48:47] 2026-03-19 09:48:43,578 [wrapper] Pilot exit status: 0
[2026-03-19 10:48:47] 2026-03-19 09:48:44,104 [wrapper] pandaids: 7057534454
[2026-03-19 10:48:47] 2026-03-19 09:48:44,956 [wrapper] cleanup supervisor_pilot 15327 14992
[2026-03-19 10:48:47] 2026-03-19 09:48:45,016 [wrapper] Test setup, not cleaning
[2026-03-19 10:48:47] 2026-03-19 09:48:45,130 [wrapper] apfmon messages muted
[2026-03-19 10:48:47] 2026-03-19 09:48:45,222 [wrapper] ==== wrapper stdout END ====
[2026-03-19 10:48:47] 2026-03-19 09:48:45,341 [wrapper] ==== wrapper stderr END ====
[2026-03-19 10:48:47]  *** Error codes and diagnostics ***
[2026-03-19 10:48:47]     "exeErrorCode": 0,
[2026-03-19 10:48:47]     "exeErrorDiag": "",
[2026-03-19 10:48:47]     "pilotErrorCode": 0,
[2026-03-19 10:48:47]     "pilotErrorDiag": "",
[2026-03-19 10:48:47]  *** Listing of results directory ***
[2026-03-19 10:48:47] total 490284
[2026-03-19 10:48:47] -rw-r--r--. 1 boinc boinc    585013 Mar 17 22:36 pilot3.tar.gz
[2026-03-19 10:48:47] -rwx------. 1 boinc boinc     36322 Mar 17 22:38 runpilot2-wrapper.sh
[2026-03-19 10:48:47] -rw-r--r--. 1 boinc boinc      5111 Mar 17 22:40 queuedata.json
[2026-03-19 10:48:47] -rw-r--r--. 1 boinc boinc       100 Mar 19 00:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 10:48:47] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 00:24 run_atlas
[2026-03-19 10:48:47] -rw-r--r--. 1 boinc boinc       105 Mar 19 00:24 job.xml
[2026-03-19 10:48:47] -rw-r--r--. 1 boinc boinc      6392 Mar 19 00:24 init_data.xml
[2026-03-19 10:48:47] -rw-r--r--. 2 boinc boinc 240953946 Mar 19 00:24 EVNT.49137320._000018.pool.root.1
[2026-03-19 10:48:47] -rw-r--r--. 2 boinc boinc     15845 Mar 19 00:24 start_atlas.sh
[2026-03-19 10:48:47] drwxrwx--x. 2 boinc boinc        68 Mar 19 00:24 shared
[2026-03-19 10:48:47] -rw-r--r--. 2 boinc boinc    597542 Mar 19 00:24 input.tar.gz
[2026-03-19 10:48:47] -rw-r--r--. 1 boinc boinc         0 Mar 19 00:24 boinc_lockfile
[2026-03-19 10:48:47] -rw-r--r--. 1 boinc boinc      2611 Mar 19 00:24 pandaJob.out
[2026-03-19 10:48:47] -rw-------. 1 boinc boinc       415 Mar 19 00:29 workernode_map.json
[2026-03-19 10:48:47] -rw-------. 1 boinc boinc   1010350 Mar 19 00:29 agis_schedconf.cvmfs.json
[2026-03-19 10:48:47] drwx------. 5 boinc boinc      4096 Mar 19 00:29 pilot3
[2026-03-19 10:48:47] -rw-------. 1 boinc boinc 245378145 Mar 19 10:46 HITS.49182524._000446.pool.root.1
[2026-03-19 10:48:47] -rw-r--r--. 1 boinc boinc       532 Mar 19 10:46 boinc_task_state.xml
[2026-03-19 10:48:47] -rw-------. 1 boinc boinc        95 Mar 19 10:47 pilot_heartbeat.json
[2026-03-19 10:48:47] -rw-------. 1 boinc boinc      1015 Mar 19 10:47 memory_monitor_summary.json
[2026-03-19 10:48:47] -rw-------. 1 boinc boinc   1511579 Mar 19 10:47 agis_ddmendpoints.agis.ALL.json
[2026-03-19 10:48:47] -rw-------. 1 boinc boinc    785814 Mar 19 10:47 log.49182524._000446.job.log.tgz.1
[2026-03-19 10:48:47] -rw-------. 1 boinc boinc      6314 Mar 19 10:47 heartbeat.json
[2026-03-19 10:48:47] -rw-r--r--. 1 boinc boinc      8192 Mar 19 10:48 boinc_mmap_file
[2026-03-19 10:48:47] -rw-r--r--. 1 boinc boinc        29 Mar 19 10:48 wrapper_checkpoint.txt
[2026-03-19 10:48:47] -rw-------. 1 boinc boinc      4952 Mar 19 10:48 pilotlog.txt
[2026-03-19 10:48:47] -rw-------. 1 boinc boinc   5111029 Mar 19 10:48 log.49182524._000446.job.log.1
[2026-03-19 10:48:47] -rw-------. 1 boinc boinc       357 Mar 19 10:48 output.list
[2026-03-19 10:48:47] -rw-r--r--. 1 boinc boinc       620 Mar 19 10:48 runtime_log
[2026-03-19 10:48:47] -rw-------. 1 boinc boinc   5918720 Mar 19 10:48 result.tar.gz
[2026-03-19 10:48:47] -rw-r--r--. 1 boinc boinc      8816 Mar 19 10:48 runtime_log.err
[2026-03-19 10:48:47] -rw-------. 1 boinc boinc       658 Mar 19 10:48 en1LDmpIrM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmw5xLDmS6DNLo.diag
[2026-03-19 10:48:47] -rw-r--r--. 1 boinc boinc     20762 Mar 19 10:48 stderr.txt
[2026-03-19 10:48:47] HITS file was successfully produced:
[2026-03-19 10:48:47] -rw-------. 1 boinc boinc 245378145 Mar 19 10:46 shared/HITS.pool.root.1
[2026-03-19 10:48:47]  *** Contents of shared directory: ***
[2026-03-19 10:48:47] total 481316
[2026-03-19 10:48:47] -rw-r--r--. 2 boinc boinc 240953946 Mar 19 00:24 ATLAS.root_0
[2026-03-19 10:48:47] -rw-r--r--. 2 boinc boinc     15845 Mar 19 00:24 start_atlas.sh
[2026-03-19 10:48:47] -rw-r--r--. 2 boinc boinc    597542 Mar 19 00:24 input.tar.gz
[2026-03-19 10:48:47] -rw-------. 1 boinc boinc 245378145 Mar 19 10:46 HITS.pool.root.1
[2026-03-19 10:48:47] -rw-------. 1 boinc boinc   5918720 Mar 19 10:48 result.tar.gz
10:48:48 (10947): run_atlas exited; CPU time 143708.387049
10:48:48 (10947): called boinc_finish(0)

</stderr_txt>
]]>

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