Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:50:13 (2129190): wrapper (7.7.26015): starting
22:50:13 (2129190): wrapper: running run_atlas (--nthreads 12)
[2026-03-19 22:50:13] Arguments: --nthreads 12
[2026-03-19 22:50:13] Threads: 12
[2026-03-19 22:50:13] Checking for CVMFS
[2026-03-19 22:50:13] No cvmfs_config command found, will try listing directly
[2026-03-19 22:50:13] CVMFS is ok
[2026-03-19 22:50:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 22:50:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 22:50:13] Further information can be found at the LHC@home message board.
[2026-03-19 22:50:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 22:50:13] Checking for apptainer binary...
[2026-03-19 22:50:13] which: no apptainer in ((null))
[2026-03-19 22:50:13] apptainer is not installed, using version from CVMFS
[2026-03-19 22:50:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 22:50:13] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-19 22:50:13] apptainer works
[2026-03-19 22:50:13] Set ATHENA_PROC_NUMBER=12
[2026-03-19 22:50:13] Set ATHENA_CORE_NUMBER=12
[2026-03-19 22:50:13] Starting ATLAS job with PandaID=7057543128
[2026-03-19 22:50:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 23:51:27]  *** The last 200 lines of the pilot log: ***
[2026-03-19 23:51:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-19 23:51:27]  is_altstaged=None
[2026-03-19 23:51:27]  is_tar=False
[2026-03-19 23:51:27]  lfn=log.49181484._000107.job.log.tgz.1
[2026-03-19 23:51:27]  mtime=0
[2026-03-19 23:51:27]  protocol_id=None
[2026-03-19 23:51:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-19 23:51:27]  replicas=None
[2026-03-19 23:51:27]  scope=mc23_13p6TeV
[2026-03-19 23:51:27]  status=None
[2026-03-19 23:51:27]  status_code=0
[2026-03-19 23:51:27]  storage_token=
[2026-03-19 23:51:27]  surl=/var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7057543128/log.49181484._000107.job.log.tgz.1
[2026-03-19 23:51:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e3/1b/log.49181484._000107.job.log.tgz.1
[2026-03-19 23:51:27]  workdir=None
[2026-03-19 23:51:27] ]
[2026-03-19 23:51:27] 2026-03-19 22:43:42,241 | INFO     | transferring file log.49181484._000107.job.log.tgz.1 from /var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7057543128/log.49181484._000107.job.log.tgz.1 to /var/lib/
[2026-03-19 23:51:27] 2026-03-19 22:43:42,242 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7057543128/log.49181484._000107.job.log.tgz.1 /var/lib/boinc/var/slot216/slots/2/
[2026-03-19 23:51:27] 2026-03-19 22:43:42,254 | INFO     | adding to output.list: log.49181484._000107.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e3/1b/log.49181484._000107.job.log.tg
[2026-03-19 23:51:27] 2026-03-19 22:43:42,254 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-19 23:51:27] 2026-03-19 22:43:42,255 | INFO     | summary of transferred files:
[2026-03-19 23:51:27] 2026-03-19 22:43:42,255 | INFO     |  -- lfn=log.49181484._000107.job.log.tgz.1, status_code=0, status=transferred
[2026-03-19 23:51:27] 2026-03-19 22:43:42,255 | INFO     | stage-out finished correctly
[2026-03-19 23:51:27] 2026-03-19 22:43:42,703 | INFO     | time since job start (3198s) is within the limit (345600.0s)
[2026-03-19 23:51:27] 2026-03-19 22:43:43,206 | INFO     | monitor loop #239: job 0:7057543128 is in state 'finished'
[2026-03-19 23:51:27] 2026-03-19 22:43:43,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-19 23:51:27] 2026-03-19 22:43:43,356 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-19 23:51:27] 2026-03-19 22:43:43,407 | INFO     | job 7057543128 has state=finished
[2026-03-19 23:51:27] 2026-03-19 22:43:43,408 | INFO     | preparing for final server update for job 7057543128 in state='finished'
[2026-03-19 23:51:27] 2026-03-19 22:43:43,408 | INFO     | reading metadata from: /var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7057543128/jobReport.json
[2026-03-19 23:51:27] 2026-03-19 22:43:43,410 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot216/slots/2/workernode_map.json
[2026-03-19 23:51:27] 2026-03-19 22:43:43,410 | INFO     | this job has now completed (state=finished)
[2026-03-19 23:51:27] 2026-03-19 22:43:43,410 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 23:51:27] 2026-03-19 22:43:43,410 | INFO     | log transfer has been attempted: DONE
[2026-03-19 23:51:27] 2026-03-19 22:43:43,410 | INFO     | job 7057543128 has finished - writing final server update
[2026-03-19 23:51:27] 2026-03-19 22:43:43,411 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3281177/.job.ad'
[2026-03-19 23:51:27] 2026-03-19 22:43:43,411 | INFO     | total number of processed events: 400 (read)
[2026-03-19 23:51:27] 2026-03-19 22:43:43,428 | INFO     | using path: /var/lib/boinc/var/slot216/slots/2/PanDA_Pilot-7057543128/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 23:51:27] 2026-03-19 22:43:43,428 | INFO     | extracted standard info from prmon json
[2026-03-19 23:51:27] 2026-03-19 22:43:43,428 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 23:51:27] 2026-03-19 22:43:43,428 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 23:51:27] 2026-03-19 22:43:43,429 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 23:51:27] 2026-03-19 22:43:43,429 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 23:51:27] 2026-03-19 22:43:43,430 | INFO     | fitting pss+swap vs Time
[2026-03-19 23:51:27] 2026-03-19 22:43:43,430 | INFO     | sum of square deviations: 30168007.5
[2026-03-19 23:51:27] 2026-03-19 22:43:43,430 | INFO     | sum of deviations: -343603179.00000006
[2026-03-19 23:51:27] 2026-03-19 22:43:43,430 | INFO     | mean x: 1773958720.5
[2026-03-19 23:51:27] 2026-03-19 22:43:43,430 | INFO     | mean y: 2742090.782608696
[2026-03-19 23:51:27] 2026-03-19 22:43:43,430 | INFO     | intersect: 20207518815.8803
[2026-03-19 23:51:27] 2026-03-19 22:43:43,430 | INFO     | chi2: 0.0037406935989774065
[2026-03-19 23:51:27] 2026-03-19 22:43:43,430 | INFO     | current memory leak: -11.39 B/s (using 46 data points, chi2=0.00)
[2026-03-19 23:51:27] 2026-03-19 22:43:43,431 | INFO     | could have reported an average CPU frequency of 3690 MHz (5 samples)
[2026-03-19 23:51:27] 2026-03-19 22:43:43,431 | INFO     | ..............................
[2026-03-19 23:51:27] 2026-03-19 22:43:43,431 | INFO     | . Timing measurements:
[2026-03-19 23:51:27] 2026-03-19 22:43:43,431 | INFO     | . get job = 0 s
[2026-03-19 23:51:27] 2026-03-19 22:43:43,431 | INFO     | . initial setup = 4 s
[2026-03-19 23:51:27] 2026-03-19 22:43:43,431 | INFO     | . payload setup = 4 s
[2026-03-19 23:51:27] 2026-03-19 22:43:43,431 | INFO     | . stage-in = 0 s
[2026-03-19 23:51:27] 2026-03-19 22:43:43,431 | INFO     | . payload execution = 3178 s
[2026-03-19 23:51:27] 2026-03-19 22:43:43,431 | INFO     | . stage-out = 0 s
[2026-03-19 23:51:27] 2026-03-19 22:43:43,431 | INFO     | . log creation = 0 s
[2026-03-19 23:51:27] 2026-03-19 22:43:43,431 | INFO     | ..............................
[2026-03-19 23:51:27] 2026-03-19 22:43:43,475 | INFO     | 
[2026-03-19 23:51:27] 2026-03-19 22:43:43,475 | INFO     | job summary report
[2026-03-19 23:51:27] 2026-03-19 22:43:43,475 | INFO     | --------------------------------------------------
[2026-03-19 23:51:27] 2026-03-19 22:43:43,475 | INFO     | PanDA job id: 7057543128
[2026-03-19 23:51:27] 2026-03-19 22:43:43,475 | INFO     | task id: 49181484
[2026-03-19 23:51:27] 2026-03-19 22:43:43,475 | INFO     | errors: (none)
[2026-03-19 23:51:27] 2026-03-19 22:43:43,475 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 23:51:27] 2026-03-19 22:43:43,475 | INFO     | pilot state: finished 
[2026-03-19 23:51:27] 2026-03-19 22:43:43,475 | INFO     | transexitcode: 0
[2026-03-19 23:51:27] 2026-03-19 22:43:43,475 | INFO     | exeerrorcode: 0
[2026-03-19 23:51:27] 2026-03-19 22:43:43,475 | INFO     | exeerrordiag: 
[2026-03-19 23:51:27] 2026-03-19 22:43:43,475 | INFO     | exitcode: 0
[2026-03-19 23:51:27] 2026-03-19 22:43:43,475 | INFO     | exitmsg: OK
[2026-03-19 23:51:27] 2026-03-19 22:43:43,475 | INFO     | cpuconsumptiontime: 35390 s
[2026-03-19 23:51:27] 2026-03-19 22:43:43,475 | INFO     | nevents: 400
[2026-03-19 23:51:27] 2026-03-19 22:43:43,475 | INFO     | neventsw: 0
[2026-03-19 23:51:27] 2026-03-19 22:43:43,476 | INFO     | pid: 2139874
[2026-03-19 23:51:27] 2026-03-19 22:43:43,476 | INFO     | pgrp: 2139874
[2026-03-19 23:51:27] 2026-03-19 22:43:43,476 | INFO     | corecount: 12
[2026-03-19 23:51:27] 2026-03-19 22:43:43,476 | INFO     | event service: False
[2026-03-19 23:51:27] 2026-03-19 22:43:43,476 | INFO     | sizes: {0: 2280322, 11: 2280322, 3186: 2305851, 3187: 2314928, 3188: 2315154}
[2026-03-19 23:51:27] 2026-03-19 22:43:43,476 | INFO     | --------------------------------------------------
[2026-03-19 23:51:27] 2026-03-19 22:43:43,476 | INFO     | 
[2026-03-19 23:51:27] 2026-03-19 22:43:43,476 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/2
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,498 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 23:51:27] 2026-03-19 22:43:43,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,499 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 23:51:27] 2026-03-19 22:43:43,499 | INFO     | job 7057543128 has completed (purged errors)
[2026-03-19 23:51:27] 2026-03-19 22:43:43,499 | INFO     | overall cleanup function is called
[2026-03-19 23:51:27] 2026-03-19 22:43:44,507 | INFO     | --- collectZombieJob: --- 10, [2139874]
[2026-03-19 23:51:27] 2026-03-19 22:43:44,507 | INFO     | zombie collector waiting for pid 2139874
[2026-03-19 23:51:27] 2026-03-19 22:43:44,507 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 23:51:27] 2026-03-19 22:43:44,507 | INFO     | collected zombie processes
[2026-03-19 23:51:27] 2026-03-19 22:43:44,507 | INFO     | will attempt to kill all subprocesses of pid=2139874
[2026-03-19 23:51:27] 2026-03-19 22:43:44,757 | INFO     | process IDs to be killed: [2139874] (in reverse order)
[2026-03-19 23:51:27] 2026-03-19 22:43:44,896 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 23:51:27] 2026-03-19 22:43:44,896 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 23:51:27] 2026-03-19 22:43:44,923 | INFO     | did not find any defunct processes belonging to 2139874
[2026-03-19 23:51:27] 2026-03-19 22:43:44,944 | INFO     | did not find any defunct processes belonging to 2139874
[2026-03-19 23:51:27] 2026-03-19 22:43:44,945 | INFO     | ready for new job
[2026-03-19 23:51:27] 2026-03-19 22:43:44,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 23:51:27] 2026-03-19 22:43:44,946 | INFO     | **************************************
[2026-03-19 23:51:27] 2026-03-19 22:43:44,946 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 23:51:27] 2026-03-19 22:43:44,946 | INFO     | **************************************
[2026-03-19 23:51:27] 2026-03-19 22:43:44,946 | INFO     | 
[2026-03-19 23:51:27] 2026-03-19 22:43:44,950 | INFO     | architecture information:
[2026-03-19 23:51:27] 2026-03-19 22:43:44,950 | INFO     | executing command: cat /etc/os-release
[2026-03-19 23:51:27] 2026-03-19 22:43:44,963 | INFO     | cat /etc/os-release:
[2026-03-19 23:51:27] NAME="CentOS Linux"
[2026-03-19 23:51:27] VERSION="7 (Core)"
[2026-03-19 23:51:27] ID="centos"
[2026-03-19 23:51:27] ID_LIKE="rhel fedora"
[2026-03-19 23:51:27] VERSION_ID="7"
[2026-03-19 23:51:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 23:51:27] ANSI_COLOR="0;31"
[2026-03-19 23:51:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 23:51:27] HOME_URL="https://www.centos.org/"
[2026-03-19 23:51:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 23:51:27] 
[2026-03-19 23:51:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 23:51:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 23:51:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 23:51:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 23:51:27] 
[2026-03-19 23:51:27] 2026-03-19 22:43:44,963 | INFO     | **************************************
[2026-03-19 23:51:27] 2026-03-19 22:43:45,466 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/2
[2026-03-19 23:51:27] 2026-03-19 22:43:45,482 | INFO     | sufficient remaining disk space (225508851712 B)
[2026-03-19 23:51:27] 2026-03-19 22:43:45,482 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 23:51:27] 2026-03-19 22:43:45,482 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 23:51:27] 2026-03-19 22:43:45,482 | INFO     | update_server=False
[2026-03-19 23:51:27] 2026-03-19 22:43:45,482 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 23:51:27] 2026-03-19 22:43:45,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 23:51:27] 2026-03-19 22:43:45,483 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 23:51:27] 2026-03-19 22:43:45,709 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-19 23:51:27] 2026-03-19 22:43:45,710 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-19 23:51:27] 2026-03-19 22:43:45,710 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 23:51:27] 2026-03-19 22:43:45,710 | INFO     | will abort loop
[2026-03-19 23:51:27] 2026-03-19 22:43:45,792 | INFO     | all payload control threads have been joined
[2026-03-19 23:51:27] 2026-03-19 22:43:46,032 | INFO     | all data control threads have been joined
[2026-03-19 23:51:27] 2026-03-19 22:43:46,488 | INFO     | [job] retrieve thread has finished
[2026-03-19 23:51:27] 2026-03-19 22:43:46,537 | INFO     | all job control threads have been joined
[2026-03-19 23:51:27] 2026-03-19 22:43:46,715 | INFO     | [job] job monitor thread has finished
[2026-03-19 23:51:27] 2026-03-19 22:43:46,798 | INFO     | [payload] control thread has finished
[2026-03-19 23:51:27] 2026-03-19 22:43:47,037 | INFO     | [data] control thread has finished
[2026-03-19 23:51:27] 2026-03-19 22:43:47,253 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 23:51:27] 2026-03-19 22:43:47,476 | INFO     | [job] validate thread has finished
[2026-03-19 23:51:27] 2026-03-19 22:43:47,489 | INFO     | [data] copytool_out thread has finished
[2026-03-19 23:51:27] 2026-03-19 22:43:47,543 | INFO     | [job] control thread has finished
[2026-03-19 23:51:27] 2026-03-19 22:43:47,583 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 23:51:27] 2026-03-19 22:43:47,607 | INFO     | [payload] validate_post thread has finished
[2026-03-19 23:51:27] 2026-03-19 22:43:47,633 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 23:51:27] 2026-03-19 22:43:47,807 | INFO     | [payload] failed_post thread has finished
[2026-03-19 23:51:27] 2026-03-19 22:43:47,846 | INFO     | [data] copytool_in thread has finished
[2026-03-19 23:51:27] 2026-03-19 22:43:48,485 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 23:51:27] 2026-03-19 22:43:49,489 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 23:51:27] 2026-03-19 22:43:49,490 | INFO     | [job] queue monitor thread has finished
[2026-03-19 23:51:27] 2026-03-19 22:43:55,876 | INFO     | job.realtimelogging is not enabled
[2026-03-19 23:51:27] 2026-03-19 22:43:56,882 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 23:51:27] 2026-03-19 22:44:16,108 | INFO     | PID=2133904 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 23:51:27] 2026-03-19 22:44:16,110 | INFO     | .. there are 6 such processes running
[2026-03-19 23:51:27] 2026-03-19 22:44:16,110 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 23:51:27] 2026-03-19 22:44:16,110 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 23:51:27] 2026-03-19 22:44:16,110 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 23:51:27] 2026-03-19 22:44:27,760 | INFO     | [monitor] cgroup control has ended
[2026-03-19 23:51:27] 2026-03-19 22:44:28,532 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22904663369536)>', '<ExcThread(monitor, started 22904422274816)>']
[2026-03-19 23:51:27] 2026-03-19 22:44:29,176 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 23:51:27] 2026-03-19 22:44:29,176 | INFO     | [monitor] control thread has ended
[2026-03-19 23:51:27] 2026-03-19 22:44:33,552 | INFO     | all workflow threads have been joined
[2026-03-19 23:51:27] 2026-03-19 22:44:33,552 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 23:51:27] 2026-03-19 22:44:33,553 | INFO     | traces error code: 0
[2026-03-19 23:51:27] 2026-03-19 22:44:33,553 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 23:51:27] 2026-03-19 22:44:33,678 [wrapper] ==== pilot stdout END ====
[2026-03-19 23:51:27] 2026-03-19 22:44:33,681 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 23:51:27] 2026-03-19 22:44:33,683 [wrapper] pilotpid: 2133904
[2026-03-19 23:51:27] 2026-03-19 22:44:33,686 [wrapper] Pilot exit status: 0
[2026-03-19 23:51:27] 2026-03-19 22:44:33,693 [wrapper] pandaids: 7057543128
[2026-03-19 23:51:27] 2026-03-19 22:44:33,769 [wrapper] cleanup supervisor_pilot 2276022 2133905
[2026-03-19 23:51:27] 2026-03-19 22:44:33,771 [wrapper] Test setup, not cleaning
[2026-03-19 23:51:27] 2026-03-19 22:44:33,773 [wrapper] apfmon messages muted
[2026-03-19 23:51:27] 2026-03-19 22:44:33,775 [wrapper] ==== wrapper stdout END ====
[2026-03-19 23:51:27] 2026-03-19 22:44:33,777 [wrapper] ==== wrapper stderr END ====
[2026-03-19 23:51:27]  *** Error codes and diagnostics ***
[2026-03-19 23:51:27]     "exeErrorCode": 0,
[2026-03-19 23:51:27]     "exeErrorDiag": "",
[2026-03-19 23:51:27]     "pilotErrorCode": 0,
[2026-03-19 23:51:27]     "pilotErrorDiag": "",
[2026-03-19 23:51:27]  *** Listing of results directory ***
[2026-03-19 23:51:27] total 468144
[2026-03-19 23:51:27] -rw-r--r--. 1 boinc boinc    585013 Mar 17 22:36 pilot3.tar.gz
[2026-03-19 23:51:27] -rwx------. 1 boinc boinc     36322 Mar 17 22:37 runpilot2-wrapper.sh
[2026-03-19 23:51:27] -rw-r--r--. 1 boinc boinc      5111 Mar 17 22:38 queuedata.json
[2026-03-19 23:51:27] -rw-r--r--. 1 boinc boinc       100 Mar 19 22:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 23:51:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 22:38 run_atlas
[2026-03-19 23:51:27] -rw-r--r--. 1 boinc boinc       105 Mar 19 22:38 job.xml
[2026-03-19 23:51:27] -rw-r--r--. 2 boinc boinc 241392175 Mar 19 22:50 EVNT.49135163._000005.pool.root.1
[2026-03-19 23:51:27] -rw-r--r--. 1 boinc boinc      6711 Mar 19 22:50 init_data.xml
[2026-03-19 23:51:27] -rw-r--r--. 2 boinc boinc     15845 Mar 19 22:50 start_atlas.sh
[2026-03-19 23:51:27] drwxrwx--x. 2 boinc boinc      4096 Mar 19 22:50 shared
[2026-03-19 23:51:27] -rw-r--r--. 2 boinc boinc    597543 Mar 19 22:50 input.tar.gz
[2026-03-19 23:51:27] -rw-r--r--. 1 boinc boinc         0 Mar 19 22:50 boinc_lockfile
[2026-03-19 23:51:27] -rw-r--r--. 1 boinc boinc      2619 Mar 19 22:50 pandaJob.out
[2026-03-19 23:51:27] -rw-------. 1 boinc boinc   1010740 Mar 19 22:50 agis_schedconf.cvmfs.json
[2026-03-19 23:51:27] -rw-------. 1 boinc boinc   1511579 Mar 19 22:50 agis_ddmendpoints.agis.ALL.json
[2026-03-19 23:51:27] -rw-------. 1 boinc boinc       445 Mar 19 22:50 workernode_map.json
[2026-03-19 23:51:27] drwx------. 5 boinc boinc      4096 Mar 19 22:50 pilot3
[2026-03-19 23:51:27] -rw-------. 1 boinc boinc 232335928 Mar 19 23:43 HITS.49181484._000107.pool.root.1
[2026-03-19 23:51:27] -rw-------. 1 boinc boinc        95 Mar 19 23:43 pilot_heartbeat.json
[2026-03-19 23:51:27] -rw-r--r--. 1 boinc boinc       530 Mar 19 23:43 boinc_task_state.xml
[2026-03-19 23:51:27] -rw-------. 1 boinc boinc      1030 Mar 19 23:43 memory_monitor_summary.json
[2026-03-19 23:51:27] -rw-------. 1 boinc boinc    361107 Mar 19 23:43 log.49181484._000107.job.log.tgz.1
[2026-03-19 23:51:27] -rw-------. 1 boinc boinc      6353 Mar 19 23:43 heartbeat.json
[2026-03-19 23:51:27] -rw-------. 1 boinc boinc      5088 Mar 19 23:44 pilotlog.txt
[2026-03-19 23:51:27] -rw-------. 1 boinc boinc    493435 Mar 19 23:44 log.49181484._000107.job.log.1
[2026-03-19 23:51:27] -rw-------. 1 boinc boinc       357 Mar 19 23:44 output.list
[2026-03-19 23:51:27] -rw-r--r--. 1 boinc boinc       620 Mar 19 23:44 runtime_log
[2026-03-19 23:51:27] -rw-------. 1 boinc boinc    870400 Mar 19 23:44 result.tar.gz
[2026-03-19 23:51:27] -rw-r--r--. 1 boinc boinc      9223 Mar 19 23:44 runtime_log.err
[2026-03-19 23:51:27] -rw-------. 1 boinc boinc       661 Mar 19 23:44 5HRNDmNHrM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmG00LDmQ6zZRm.diag
[2026-03-19 23:51:27] -rw-r--r--. 1 boinc boinc        27 Mar 19 23:51 wrapper_checkpoint.txt
[2026-03-19 23:51:27] -rw-r--r--. 1 boinc boinc      8192 Mar 19 23:51 boinc_mmap_file
[2026-03-19 23:51:27] -rw-r--r--. 1 boinc boinc     21275 Mar 19 23:51 stderr.txt
[2026-03-19 23:51:27] HITS file was successfully produced:
[2026-03-19 23:51:27] -rw-------. 1 boinc boinc 232335928 Mar 19 23:43 shared/HITS.pool.root.1
[2026-03-19 23:51:27]  *** Contents of shared directory: ***
[2026-03-19 23:51:27] total 464088
[2026-03-19 23:51:27] -rw-r--r--. 2 boinc boinc 241392175 Mar 19 22:50 ATLAS.root_0
[2026-03-19 23:51:27] -rw-r--r--. 2 boinc boinc     15845 Mar 19 22:50 start_atlas.sh
[2026-03-19 23:51:27] -rw-r--r--. 2 boinc boinc    597543 Mar 19 22:50 input.tar.gz
[2026-03-19 23:51:27] -rw-------. 1 boinc boinc 232335928 Mar 19 23:43 HITS.pool.root.1
[2026-03-19 23:51:27] -rw-------. 1 boinc boinc    870400 Mar 19 23:44 result.tar.gz
23:51:28 (2129190): run_atlas exited; CPU time 35489.658899
23:51:28 (2129190): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN