Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-18 09:04:48 (18580): vboxwrapper version 26210
2026-03-18 09:04:48 (18580): BOINC client version: 8.2.8
2026-03-18 09:04:49 (18580): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-03-18 09:04:49 (18580): Successfully copied 'init_data.xml' to the shared directory.
2026-03-18 09:04:49 (18580): Create VM. (boinc_3c0fea1f6725381f, slot#3)
2026-03-18 09:04:50 (18580): Setting Memory Size for VM. (4400MB)
2026-03-18 09:04:50 (18580): Setting CPU Count for VM. (4)
2026-03-18 09:04:50 (18580): Setting Chipset Options for VM.
2026-03-18 09:04:50 (18580): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-18 09:04:51 (18580): Setting Boot Options for VM.
2026-03-18 09:04:51 (18580): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-18 09:04:52 (18580): Enabling VM Network Access.
2026-03-18 09:04:52 (18580): Disabling USB Support for VM.
2026-03-18 09:04:52 (18580): Disabling COM Port Support for VM.
2026-03-18 09:04:52 (18580): Disabling LPT Port Support for VM.
2026-03-18 09:04:53 (18580): Disabling Audio Support for VM.
2026-03-18 09:04:53 (18580): Disabling Clipboard Support for VM.
2026-03-18 09:04:53 (18580): Disabling Drag and Drop Support for VM.
2026-03-18 09:04:53 (18580): Adding storage controller(s) to VM.
2026-03-18 09:04:54 (18580): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-18 09:04:54 (18580): Adding VirtualBox Guest Additions to VM.
2026-03-18 09:04:54 (18580): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-18 09:04:55 (18580): forwarding host port 61412 to guest port 80
2026-03-18 09:04:55 (18580): Enabling remote desktop for VM.
2026-03-18 09:04:55 (18580): Required extension pack not installed, remote desktop not enabled.
2026-03-18 09:04:55 (18580): Enabling shared directory for VM.
2026-03-18 09:04:56 (18580): Starting VM using VBoxManage interface. (boinc_3c0fea1f6725381f, slot#3)
2026-03-18 09:05:00 (18580): Successfully started VM. (PID = '19160')
2026-03-18 09:05:00 (18580): Reporting VM Process ID to BOINC.
2026-03-18 09:05:00 (18580): Guest Log: BIOS: VirtualBox 7.2.6
2026-03-18 09:05:00 (18580): Guest Log: CPUID EDX: 0x178bfbff
2026-03-18 09:05:00 (18580): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-18 09:05:00 (18580): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-18 09:05:00 (18580): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-18 09:05:00 (18580): Detected: Web Application Enabled (http://localhost:61412)
2026-03-18 09:05:00 (18580): Preference change detected
2026-03-18 09:05:00 (18580): Setting CPU throttle for VM. (100%)
2026-03-18 09:05:00 (18580): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-18 09:05:02 (18580): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-18 09:05:02 (18580): Guest Log: BIOS: Booting from Hard Disk...
2026-03-18 09:05:04 (18580): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-18 09:05:04 (18580): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-18 09:05:04 (18580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-18 09:05:08 (18580): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-18 09:05:08 (18580): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-18 09:05:12 (18580): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-18 09:05:12 (18580): Guest Log: 00:00:00.000106 main     Log opened 2026-03-18T09:05:10.727948000Z
2026-03-18 09:05:12 (18580): Guest Log: 00:00:00.000190 main     OS Product: Linux
2026-03-18 09:05:12 (18580): Guest Log: 00:00:00.000203 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-18 09:05:12 (18580): Guest Log: 00:00:00.000214 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-18 09:05:12 (18580): Guest Log: 00:00:00.000224 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-18 09:05:12 (18580): Guest Log: 00:00:00.000225 main     Process ID: 1309
2026-03-18 09:05:12 (18580): Guest Log: 00:00:00.000225 main     Package type: LINUX_64BITS_GENERIC
2026-03-18 09:05:12 (18580): Guest Log: 00:00:00.000771 main     5.2.32 r132073 started. Verbose level = 0
2026-03-18 09:05:12 (18580): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-18 09:05:12 (18580): Guest Log: [INFO] Mounting shared directory
2026-03-18 09:05:12 (18580): Guest Log: [INFO] Checking for init_data.xml
2026-03-18 09:05:22 (18580): Guest Log: 00:00:10.007139 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 532 692 000ns (GuestNow=1 773 821 122 199 120 000 ns GuestLast=1 773 824 710 731 812 000 ns fSetTimeLastLoop=true )
2026-03-18 09:06:08 (18580): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-18 09:06:08 (18580): Guest Log: [INFO] Detected branch: prod
2026-03-18 09:06:08 (18580): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-18 09:06:08 (18580): Guest Log: Copying input files
2026-03-18 09:06:08 (18580): Guest Log: Copied input files into RunAtlas.
2026-03-18 09:06:08 (18580): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-18 09:06:08 (18580): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-18 09:06:08 (18580): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-18 09:06:08 (18580): Guest Log: Further information can be found at the LHC@home message board.
2026-03-18 09:06:16 (18580): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-18 09:06:16 (18580): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-18 09:06:16 (18580): Guest Log: 2.6.3.0 1607 0 32208 157407 3 1 3117744 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-18 09:06:16 (18580): Guest Log: copied the webapp to /var/www
2026-03-18 09:06:16 (18580): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-18 09:06:16 (18580): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-18 09:06:17 (18580): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-18 09:06:17 (18580): Guest Log:  *** Starting ATLAS job. (PandaID=7057144656 taskID=49190838) ***
2026-03-18 10:27:29 (18580): Preference change detected
2026-03-18 10:27:29 (18580): Setting CPU throttle for VM. (90%)
2026-03-18 10:27:29 (18580): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-18 10:29:58 (18580): Preference change detected
2026-03-18 10:29:58 (18580): Setting CPU throttle for VM. (60%)
2026-03-18 10:29:58 (18580): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-18 10:30:34 (18580): Preference change detected
2026-03-18 10:30:34 (18580): Setting CPU throttle for VM. (45%)
2026-03-18 10:30:34 (18580): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-18 10:31:00 (18580): Preference change detected
2026-03-18 10:31:00 (18580): Setting CPU throttle for VM. (100%)
2026-03-18 10:31:00 (18580): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-18 10:34:03 (18580): Preference change detected
2026-03-18 10:34:03 (18580): Setting CPU throttle for VM. (90%)
2026-03-18 10:34:05 (18580): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-18 10:45:48 (18580): Status Report: Elapsed Time: '6000.353273'
2026-03-18 10:45:48 (18580): Status Report: CPU Time: '22284.203125'
2026-03-18 10:58:09 (18580): Guest Log:  *** Job finished ***
2026-03-18 10:58:09 (18580): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:02,369 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:02,369 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:08,158 | INFO     | [monitor] cgroup control has ended
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:08,307 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139766981285696)>', '<ExcThread(monitor, started 139766381127424)>']
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:08,380 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:08,380 | INFO     | [monitor] control thread has ended
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:13,311 | INFO     | all workflow threads have been joined
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:13,311 | INFO     | end of generic workflow (traces error code: 0)
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:13,311 | INFO     | traces error code: 0
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:13,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:13,383 [wrapper] ==== pilot stdout END ====
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:13,386 [wrapper] ==== wrapper stdout RESUME ====
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:13,390 [wrapper] pilotpid: 5988
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:13,393 [wrapper] Pilot exit status: 0
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:13,491 [wrapper] pandaids: 7057144656
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:13,508 [wrapper] cleanup supervisor_pilot 19662 5989
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:13,511 [wrapper] Test setup, not cleaning
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:13,514 [wrapper] apfmon messages muted
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:13,517 [wrapper] ==== wrapper stdout END ====
2026-03-18 10:58:09 (18580): Guest Log: 2026-03-18 09:58:13,519 [wrapper] ==== wrapper stderr END ====
2026-03-18 10:58:09 (18580): Guest Log:  *** Error codes and diagnostics ***
2026-03-18 10:58:09 (18580): Guest Log:     "exeErrorCode": 0,
2026-03-18 10:58:09 (18580): Guest Log:     "exeErrorDiag": "",
2026-03-18 10:58:09 (18580): Guest Log:     "pilotErrorCode": 0,
2026-03-18 10:58:09 (18580): Guest Log:     "pilotErrorDiag": "",
2026-03-18 10:58:09 (18580): Guest Log:  *** Listing of results directory ***
2026-03-18 10:58:09 (18580): Guest Log: total 216836
2026-03-18 10:58:09 (18580): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 17 06:06 runpilot2-wrapper.sh
2026-03-18 10:58:09 (18580): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 17 06:08 pilot3.tar.gz
2026-03-18 10:58:09 (18580): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 17 06:08 queuedata.json
2026-03-18 10:58:09 (18580): Guest Log: -rwxr-xr-x. 1 atlas atlas      8618 Mar 18 08:06 init_data.xml
2026-03-18 10:58:09 (18580): Guest Log: -rwxr-xr-x. 1 atlas atlas    597533 Mar 18 08:06 input.tar.gz
2026-03-18 10:58:09 (18580): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 18 08:06 start_atlas.sh
2026-03-18 10:58:09 (18580): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 18 08:06 EVNT.49124756._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-03-18 10:58:09 (18580): Guest Log: -rw-r--r--. 1 atlas atlas      2582 Mar 18 08:06 pandaJob.out
2026-03-18 10:58:09 (18580): Guest Log: -rw-------. 1 atlas atlas   1011499 Mar 18 08:06 agis_schedconf.cvmfs.json
2026-03-18 10:58:09 (18580): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 18 08:06 agis_ddmendpoints.agis.ALL.json
2026-03-18 10:58:09 (18580): Guest Log: -rw-------. 1 atlas atlas       422 Mar 18 08:06 workernode_map.json
2026-03-18 10:58:09 (18580): Guest Log: drwx------. 5 atlas atlas      4096 Mar 18 08:07 pilot3
2026-03-18 10:58:09 (18580): Guest Log: -rw-------. 1 atlas atlas 215689605 Mar 18 09:57 HITS.49190838._000014.pool.root.1
2026-03-18 10:58:09 (18580): Guest Log: -rw-------. 1 atlas atlas      1026 Mar 18 09:57 memory_monitor_summary.json
2026-03-18 10:58:09 (18580): Guest Log: -rw-------. 1 atlas atlas    292067 Mar 18 09:57 log.49190838._000014.job.log.tgz.1
2026-03-18 10:58:09 (18580): Guest Log: -rw-------. 1 atlas atlas      6316 Mar 18 09:57 heartbeat.json
2026-03-18 10:58:09 (18580): Guest Log: -rw-------. 1 atlas atlas        95 Mar 18 09:58 pilot_heartbeat.json
2026-03-18 10:58:09 (18580): Guest Log: -rw-------. 1 atlas atlas      5388 Mar 18 09:58 pilotlog.txt
2026-03-18 10:58:09 (18580): Guest Log: -rw-------. 1 atlas atlas    945587 Mar 18 09:58 log.49190838._000014.job.log.1
2026-03-18 10:58:09 (18580): Guest Log: -rw-------. 1 atlas atlas       357 Mar 18 09:58 output.list
2026-03-18 10:58:09 (18580): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 18 09:58 runtime_log
2026-03-18 10:58:09 (18580): Guest Log: -rw-------. 1 atlas atlas   1259520 Mar 18 09:58 result.tar.gz
2026-03-18 10:58:09 (18580): Guest Log: -rw-r--r--. 1 atlas atlas      8736 Mar 18 09:58 runtime_log.err
2026-03-18 10:58:09 (18580): Guest Log: -rw-------. 1 atlas atlas       649 Mar 18 09:58 cbvKDmkkcM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmutwLDmv28jvn.diag
2026-03-18 10:58:09 (18580): Guest Log: Looking for outputfile HITS.49190838._000014.pool.root.1
2026-03-18 10:58:09 (18580): Guest Log: HITS file was successfully produced
2026-03-18 10:58:09 (18580): Guest Log: -rw-------. 1 atlas atlas 215689605 Mar 18 09:57 /home/atlas/RunAtlas/HITS.49190838._000014.pool.root.1
2026-03-18 10:58:09 (18580): Guest Log: Successfully finished the ATLAS job!
2026-03-18 10:58:09 (18580): Guest Log: Copying the results back to the shared directory!
2026-03-18 10:58:09 (18580): Guest Log:  *** Contents of shared directory: ***
2026-03-18 10:58:09 (18580): Guest Log: total 460396
2026-03-18 10:58:09 (18580): Guest Log: -rwxrwxrwx. 1 root root 253862161 Mar 18 08:04 ATLAS.root_0
2026-03-18 10:58:09 (18580): Guest Log: -rwxrwxrwx. 1 root root 215689605 Mar 18 09:58 HITS.pool.root.1
2026-03-18 10:58:09 (18580): Guest Log: -rwxrwxrwx. 1 root root      8618 Mar 18 08:04 init_data.xml
2026-03-18 10:58:09 (18580): Guest Log: -rwxrwxrwx. 1 root root    597533 Mar 17 21:14 input.tar.gz
2026-03-18 10:58:09 (18580): Guest Log: -rwxrwxrwx. 1 root root   1259520 Mar 18 09:58 result.tar.gz
2026-03-18 10:58:10 (18580): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 17 21:14 start_atlas.sh
2026-03-18 10:58:10 (18580): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-18 10:58:10 (18580): VM Completion File Detected.
2026-03-18 10:58:10 (18580): Powering off VM.
2026-03-18 10:58:10 (18580): Successfully stopped VM.
2026-03-18 10:58:10 (18580): Deregistering VM. (boinc_3c0fea1f6725381f, slot#3)
2026-03-18 10:58:10 (18580): Removing network bandwidth throttle group from VM.
2026-03-18 10:58:10 (18580): Removing VM from VirtualBox.
2026-03-18 10:58:15 (18580): called boinc_finish(0)

</stderr_txt>
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