Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:41:28 (3339773): wrapper (7.7.26015): starting
16:41:28 (3339773): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 16:41:28] Arguments: --nthreads 8
[2026-03-17 16:41:28] Threads: 8
[2026-03-17 16:41:28] Checking for CVMFS
[2026-03-17 16:41:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 16:41:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 16:41:29] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 16:41:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 16:41:29] 2.13.3.0 12500 190384 430956 157385 3 830 24950102 32503809 32153 16776704 0 1076884834 99.537 1293685752 34178 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-17 16:41:29] CVMFS is ok
[2026-03-17 16:41:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 16:41:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 16:41:29] Further information can be found at the LHC@home message board.
[2026-03-17 16:41:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 16:41:29] Checking for apptainer binary...
[2026-03-17 16:41:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 16:41:29] Running /usr/bin/apptainer --version
[2026-03-17 16:41:29] apptainer version 1.4.5-2.el9
[2026-03-17 16:41:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 16:41:29] c7-7-36.aglt2.org
[2026-03-17 16:41:29] apptainer works
[2026-03-17 16:41:30] Set ATHENA_PROC_NUMBER=8
[2026-03-17 16:41:30] Set ATHENA_CORE_NUMBER=8
[2026-03-17 16:41:30] Starting ATLAS job with PandaID=7057205611
[2026-03-17 16:41:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:00:10 (3339773): BOINC client no longer exists - exiting
21:00:10 (3339773): timer handler: client dead, exiting
21:10:20 (404618): wrapper (7.7.26015): starting
21:10:20 (404618): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 21:10:20] Arguments: --nthreads 8
[2026-03-17 21:10:20] Threads: 8
[2026-03-17 21:10:20] This job has been restarted, cleaning up previous attempt
[2026-03-17 21:10:20] Checking for CVMFS
[2026-03-17 21:10:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 21:10:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 21:10:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 21:10:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 21:10:22] 2.13.3.0 12500 190652 318328 157394 3 876 26436850 32503808 29152 16776704 0 1078159782 99.536 1298834370 34149 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-17 21:10:22] CVMFS is ok
[2026-03-17 21:10:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 21:10:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 21:10:22] Further information can be found at the LHC@home message board.
[2026-03-17 21:10:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 21:10:22] Checking for apptainer binary...
[2026-03-17 21:10:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 21:10:22] Running /usr/bin/apptainer --version
[2026-03-17 21:10:23] apptainer version 1.4.5-2.el9
[2026-03-17 21:10:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 21:10:23] c7-7-36.aglt2.org
[2026-03-17 21:10:23] apptainer works
[2026-03-17 21:10:23] Set ATHENA_PROC_NUMBER=8
[2026-03-17 21:10:23] Set ATHENA_CORE_NUMBER=8
[2026-03-17 21:10:23] Starting ATLAS job with PandaID=7057205611
[2026-03-17 21:10:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 09:17:48]  *** The last 200 lines of the pilot log: ***
[2026-03-18 09:17:48] 2026-03-18 13:17:13,265 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 09:17:48] 2026-03-18 13:17:13,265 | INFO     | log transfer has been attempted: DONE
[2026-03-18 09:17:48] 2026-03-18 13:17:13,266 | INFO     | job 7057205611 has finished - writing final server update
[2026-03-18 09:17:48] 2026-03-18 13:17:13,266 | INFO     | total number of processed events: 400 (read)
[2026-03-18 09:17:48] 2026-03-18 13:17:13,279 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7057205611/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 09:17:48] 2026-03-18 13:17:13,279 | INFO     | extracted standard info from prmon json
[2026-03-18 09:17:48] 2026-03-18 13:17:13,279 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 09:17:48] 2026-03-18 13:17:13,279 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 09:17:48] 2026-03-18 13:17:13,280 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 09:17:48] 2026-03-18 13:17:13,280 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 09:17:48] 2026-03-18 13:17:13,287 | INFO     | fitting pss+swap vs Time
[2026-03-18 09:17:48] 2026-03-18 13:17:13,288 | INFO     | sum of square deviations: 112869571441.1162
[2026-03-18 09:17:48] 2026-03-18 13:17:13,296 | INFO     | sum of deviations: 43722847831.31506
[2026-03-18 09:17:48] 2026-03-18 13:17:13,297 | INFO     | mean x: 1773818048.82493
[2026-03-18 09:17:48] 2026-03-18 13:17:13,297 | INFO     | mean y: 2498121.8025210085
[2026-03-18 09:17:48] 2026-03-18 13:17:13,297 | INFO     | intersect: -684634607.0541098
[2026-03-18 09:17:48] 2026-03-18 13:17:13,297 | INFO     | chi2: 5.428061388762497
[2026-03-18 09:17:48] 2026-03-18 13:17:13,298 | INFO     | sum of square deviations: 110514977875.7378
[2026-03-18 09:17:48] 2026-03-18 13:17:13,306 | INFO     | sum of deviations: 270044354978.4792
[2026-03-18 09:17:48] 2026-03-18 13:17:13,307 | INFO     | mean x: 1773817896.325811
[2026-03-18 09:17:48] 2026-03-18 13:17:13,307 | INFO     | mean y: 2512780.339915374
[2026-03-18 09:17:48] 2026-03-18 13:17:13,307 | INFO     | intersect: -4331827404.763149
[2026-03-18 09:17:48] 2026-03-18 13:17:13,307 | INFO     | chi2: 1.906003473686988
[2026-03-18 09:17:48] 2026-03-18 13:17:13,308 | INFO     | current chi2=1.906003473686988 (change=64.88611058023565 %)
[2026-03-18 09:17:48] 2026-03-18 13:17:13,308 | INFO     | sum of square deviations: 108193404800.20312
[2026-03-18 09:17:48] 2026-03-18 13:17:13,317 | INFO     | sum of deviations: 267263589990.8125
[2026-03-18 09:17:48] 2026-03-18 13:17:13,317 | INFO     | mean x: 1773817743.828125
[2026-03-18 09:17:48] 2026-03-18 13:17:13,317 | INFO     | mean y: 2512597.6761363638
[2026-03-18 09:17:48] 2026-03-18 13:17:13,317 | INFO     | intersect: -4379241531.241138
[2026-03-18 09:17:48] 2026-03-18 13:17:13,318 | INFO     | chi2: 1.9059806634391006
[2026-03-18 09:17:48] 2026-03-18 13:17:13,318 | INFO     | current chi2=1.9059806634391006 (change=0.001196757938918795 %)
[2026-03-18 09:17:48] 2026-03-18 13:17:13,318 | INFO     | right removable region: 703
[2026-03-18 09:17:48] 2026-03-18 13:17:13,319 | INFO     | sum of square deviations: 110514879788.0849
[2026-03-18 09:17:48] 2026-03-18 13:17:13,325 | INFO     | sum of deviations: -98083975774.17787
[2026-03-18 09:17:48] 2026-03-18 13:17:13,325 | INFO     | mean x: 1773818201.3272214
[2026-03-18 09:17:48] 2026-03-18 13:17:13,325 | INFO     | mean y: 2507284.112834979
[2026-03-18 09:17:48] 2026-03-18 13:17:13,325 | INFO     | intersect: 1576803359.1788538
[2026-03-18 09:17:48] 2026-03-18 13:17:13,326 | INFO     | chi2: 3.584570324152783
[2026-03-18 09:17:48] 2026-03-18 13:17:13,326 | INFO     | current chi2=3.584570324152783 (change=33.96223683885045 %)
[2026-03-18 09:17:48] 2026-03-18 13:17:13,326 | INFO     | sum of square deviations: 108193165497.54578
[2026-03-18 09:17:48] 2026-03-18 13:17:13,332 | INFO     | sum of deviations: -112555340205.3068
[2026-03-18 09:17:48] 2026-03-18 13:17:13,332 | INFO     | mean x: 1773818353.8295455
[2026-03-18 09:17:48] 2026-03-18 13:17:13,332 | INFO     | mean y: 2508231.4474431816
[2026-03-18 09:17:48] 2026-03-18 13:17:13,333 | INFO     | intersect: 1847844093.094181
[2026-03-18 09:17:48] 2026-03-18 13:17:13,333 | INFO     | chi2: 3.5584935598451937
[2026-03-18 09:17:48] 2026-03-18 13:17:13,333 | INFO     | current chi2=3.5584935598451937 (change=0.727472526675919 %)
[2026-03-18 09:17:48] 2026-03-18 13:17:13,333 | INFO     | left removable region: 20
[2026-03-18 09:17:48] 2026-03-18 13:17:13,333 | INFO     | sum of square deviations: 98797098570.87276
[2026-03-18 09:17:48] 2026-03-18 13:17:13,339 | INFO     | sum of deviations: 103295450399.00429
[2026-03-18 09:17:48] 2026-03-18 13:17:13,339 | INFO     | mean x: 1773818323.3382137
[2026-03-18 09:17:48] 2026-03-18 13:17:13,339 | INFO     | mean y: 2523484.298682284
[2026-03-18 09:17:48] 2026-03-18 13:17:13,339 | INFO     | intersect: -1852058940.5463958
[2026-03-18 09:17:48] 2026-03-18 13:17:13,340 | INFO     | chi2: 0.004592640007879917
[2026-03-18 09:17:48] 2026-03-18 13:17:13,340 | INFO     | current memory leak: 1.05 B/s (using 683 data points, chi2=0.00)
[2026-03-18 09:17:48] 2026-03-18 13:17:13,340 | INFO     | could have reported an average CPU frequency of 3222 MHz (28 samples)
[2026-03-18 09:17:48] 2026-03-18 13:17:13,341 | INFO     | ..............................
[2026-03-18 09:17:48] 2026-03-18 13:17:13,341 | INFO     | . Timing measurements:
[2026-03-18 09:17:48] 2026-03-18 13:17:13,341 | INFO     | . get job = 0 s
[2026-03-18 09:17:48] 2026-03-18 13:17:13,341 | INFO     | . initial setup = 3 s
[2026-03-18 09:17:48] 2026-03-18 13:17:13,341 | INFO     | . payload setup = 23 s
[2026-03-18 09:17:48] 2026-03-18 13:17:13,341 | INFO     | . stage-in = 0 s
[2026-03-18 09:17:48] 2026-03-18 13:17:13,341 | INFO     | . payload execution = 43538 s
[2026-03-18 09:17:48] 2026-03-18 13:17:13,341 | INFO     | . stage-out = 3 s
[2026-03-18 09:17:48] 2026-03-18 13:17:13,341 | INFO     | . log creation = 0 s
[2026-03-18 09:17:48] 2026-03-18 13:17:13,341 | INFO     | ..............................
[2026-03-18 09:17:48] 2026-03-18 13:17:13,392 | INFO     | 
[2026-03-18 09:17:48] 2026-03-18 13:17:13,392 | INFO     | job summary report
[2026-03-18 09:17:48] 2026-03-18 13:17:13,392 | INFO     | --------------------------------------------------
[2026-03-18 09:17:48] 2026-03-18 13:17:13,393 | INFO     | PanDA job id: 7057205611
[2026-03-18 09:17:48] 2026-03-18 13:17:13,393 | INFO     | task id: 49180840
[2026-03-18 09:17:48] 2026-03-18 13:17:13,395 | INFO     | errors: (none)
[2026-03-18 09:17:48] 2026-03-18 13:17:13,396 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 09:17:48] 2026-03-18 13:17:13,396 | INFO     | pilot state: finished 
[2026-03-18 09:17:48] 2026-03-18 13:17:13,396 | INFO     | transexitcode: 0
[2026-03-18 09:17:48] 2026-03-18 13:17:13,396 | INFO     | exeerrorcode: 0
[2026-03-18 09:17:48] 2026-03-18 13:17:13,396 | INFO     | exeerrordiag: 
[2026-03-18 09:17:48] 2026-03-18 13:17:13,396 | INFO     | exitcode: 0
[2026-03-18 09:17:48] 2026-03-18 13:17:13,396 | INFO     | exitmsg: OK
[2026-03-18 09:17:48] 2026-03-18 13:17:13,396 | INFO     | cpuconsumptiontime: 66710 s
[2026-03-18 09:17:48] 2026-03-18 13:17:13,396 | INFO     | nevents: 400
[2026-03-18 09:17:48] 2026-03-18 13:17:13,396 | INFO     | neventsw: 0
[2026-03-18 09:17:48] 2026-03-18 13:17:13,396 | INFO     | pid: 439214
[2026-03-18 09:17:48] 2026-03-18 13:17:13,396 | INFO     | pgrp: 439214
[2026-03-18 09:17:48] 2026-03-18 13:17:13,403 | INFO     | corecount: 8
[2026-03-18 09:17:48] 2026-03-18 13:17:13,403 | INFO     | event service: False
[2026-03-18 09:17:48] 2026-03-18 13:17:13,404 | INFO     | sizes: {0: 2279303, 1: 2280421, 2: 2280421, 43565: 2324560, 43566: 2324559, 43569: 2333797, 43572: 2333935}
[2026-03-18 09:17:48] 2026-03-18 13:17:13,404 | INFO     | --------------------------------------------------
[2026-03-18 09:17:48] 2026-03-18 13:17:13,404 | INFO     | 
[2026-03-18 09:17:48] 2026-03-18 13:17:13,404 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-18 09:17:48] 2026-03-18 13:17:13,445 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,446 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,446 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,446 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,446 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,446 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,446 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,446 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,447 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,447 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,447 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,447 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,447 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,447 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,447 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,447 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,447 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,447 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 09:17:48] 2026-03-18 13:17:13,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,448 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 09:17:48] 2026-03-18 13:17:13,448 | INFO     | job 7057205611 has completed (purged errors)
[2026-03-18 09:17:48] 2026-03-18 13:17:13,448 | INFO     | overall cleanup function is called
[2026-03-18 09:17:48] 2026-03-18 13:17:14,456 | INFO     | --- collectZombieJob: --- 10, [439214]
[2026-03-18 09:17:48] 2026-03-18 13:17:14,457 | INFO     | zombie collector waiting for pid 439214
[2026-03-18 09:17:48] 2026-03-18 13:17:14,457 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 09:17:48] 2026-03-18 13:17:14,457 | INFO     | collected zombie processes
[2026-03-18 09:17:48] 2026-03-18 13:17:14,457 | INFO     | will attempt to kill all subprocesses of pid=439214
[2026-03-18 09:17:48] 2026-03-18 13:17:15,789 | INFO     | process IDs to be killed: [439214] (in reverse order)
[2026-03-18 09:17:48] 2026-03-18 13:17:16,136 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 09:17:48] 2026-03-18 13:17:16,137 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 09:17:48] 2026-03-18 13:17:16,231 | INFO     | did not find any defunct processes belonging to 439214
[2026-03-18 09:17:48] 2026-03-18 13:17:16,331 | INFO     | did not find any defunct processes belonging to 439214
[2026-03-18 09:17:48] 2026-03-18 13:17:16,331 | INFO     | ready for new job
[2026-03-18 09:17:48] 2026-03-18 13:17:16,331 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 09:17:48] 2026-03-18 13:17:16,351 | INFO     | **************************************
[2026-03-18 09:17:48] 2026-03-18 13:17:16,351 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 09:17:48] 2026-03-18 13:17:16,351 | INFO     | **************************************
[2026-03-18 09:17:48] 2026-03-18 13:17:16,351 | INFO     | 
[2026-03-18 09:17:48] 2026-03-18 13:17:16,373 | INFO     | architecture information:
[2026-03-18 09:17:48] 2026-03-18 13:17:16,383 | INFO     | executing command: cat /etc/os-release
[2026-03-18 09:17:48] 2026-03-18 13:17:16,435 | INFO     | cat /etc/os-release:
[2026-03-18 09:17:48] NAME="CentOS Linux"
[2026-03-18 09:17:48] VERSION="7 (Core)"
[2026-03-18 09:17:48] ID="centos"
[2026-03-18 09:17:48] ID_LIKE="rhel fedora"
[2026-03-18 09:17:48] VERSION_ID="7"
[2026-03-18 09:17:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 09:17:48] ANSI_COLOR="0;31"
[2026-03-18 09:17:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 09:17:48] HOME_URL="https://www.centos.org/"
[2026-03-18 09:17:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 09:17:48] 
[2026-03-18 09:17:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 09:17:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 09:17:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 09:17:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 09:17:48] 
[2026-03-18 09:17:48] 2026-03-18 13:17:16,435 | INFO     | **************************************
[2026-03-18 09:17:48] 2026-03-18 13:17:16,939 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-18 09:17:48] 2026-03-18 13:17:17,045 | INFO     | sufficient remaining disk space (93076848640 B)
[2026-03-18 09:17:48] 2026-03-18 13:17:17,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 09:17:48] 2026-03-18 13:17:17,045 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 09:17:48] 2026-03-18 13:17:17,045 | INFO     | update_server=False
[2026-03-18 09:17:48] 2026-03-18 13:17:17,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 09:17:48] 2026-03-18 13:17:17,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 09:17:48] 2026-03-18 13:17:17,066 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 09:17:48] 2026-03-18 13:17:17,066 | INFO     | aborting loop
[2026-03-18 09:17:48] 2026-03-18 13:17:17,898 | INFO     | all data control threads have been joined
[2026-03-18 09:17:48] 2026-03-18 13:17:18,051 | INFO     | [job] retrieve thread has finished
[2026-03-18 09:17:48] 2026-03-18 13:17:18,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 09:17:48] 2026-03-18 13:17:18,073 | INFO     | [job] job monitor thread has finished
[2026-03-18 09:17:48] 2026-03-18 13:17:18,241 | INFO     | all payload control threads have been joined
[2026-03-18 09:17:48] 2026-03-18 13:17:18,308 | INFO     | all job control threads have been joined
[2026-03-18 09:17:48] 2026-03-18 13:17:18,414 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 09:17:48] 2026-03-18 13:17:18,470 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 09:17:48] 2026-03-18 13:17:18,478 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 09:17:48] 2026-03-18 13:17:18,910 | INFO     | [data] control thread has finished
[2026-03-18 09:17:48] 2026-03-18 13:17:19,067 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 09:17:48] 2026-03-18 13:17:19,138 | INFO     | [job] validate thread has finished
[2026-03-18 09:17:48] 2026-03-18 13:17:19,173 | INFO     | [payload] validate_post thread has finished
[2026-03-18 09:17:48] 2026-03-18 13:17:19,249 | INFO     | [payload] control thread has finished
[2026-03-18 09:17:48] 2026-03-18 13:17:19,285 | INFO     | [data] copytool_in thread has finished
[2026-03-18 09:17:48] 2026-03-18 13:17:19,314 | INFO     | [job] control thread has finished
[2026-03-18 09:17:48] 2026-03-18 13:17:19,420 | INFO     | [job] queue monitor thread has finished
[2026-03-18 09:17:48] 2026-03-18 13:17:19,512 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 09:17:48] 2026-03-18 13:17:19,530 | INFO     | [payload] failed_post thread has finished
[2026-03-18 09:17:48] 2026-03-18 13:17:19,568 | INFO     | [monitor] cgroup control has ended
[2026-03-18 09:17:48] 2026-03-18 13:17:20,069 | INFO     | [data] copytool_out thread has finished
[2026-03-18 09:17:48] 2026-03-18 13:17:21,063 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 09:17:48] 2026-03-18 13:17:21,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140295202133824)>', '<ExcThread(monitor, started 140294544672512)>']
[2026-03-18 09:17:48] 2026-03-18 13:17:26,552 | INFO     | all workflow threads have been joined
[2026-03-18 09:17:48] 2026-03-18 13:17:26,553 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 09:17:48] 2026-03-18 13:17:26,556 | INFO     | traces error code: 0
[2026-03-18 09:17:48] 2026-03-18 13:17:26,557 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 09:17:48] 2026-03-18 13:17:47,127 | INFO     | PID=425729 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-18 09:17:48] 2026-03-18 13:17:47,130 | INFO     | .. there are 46 such processes running
[2026-03-18 09:17:48] 2026-03-18 13:17:47,131 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 09:17:48] 2026-03-18 13:17:47,131 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 09:17:48] 2026-03-18 13:17:47,131 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 09:17:48] 2026-03-18 13:17:47,131 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 09:17:48] 2026-03-18 13:17:47,131 | INFO     | [monitor] control thread has ended
[2026-03-18 09:17:48] 2026-03-18 13:17:47,461 [wrapper] ==== pilot stdout END ====
[2026-03-18 09:17:48] 2026-03-18 13:17:47,490 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 09:17:48] 2026-03-18 13:17:47,494 [wrapper] pilotpid: 425729
[2026-03-18 09:17:48] 2026-03-18 13:17:47,497 [wrapper] Pilot exit status: 0
[2026-03-18 09:17:48] 2026-03-18 13:17:47,513 [wrapper] pandaids: 7057205611 7057205611
[2026-03-18 09:17:48] 2026-03-18 13:17:47,640 [wrapper] cleanup supervisor_pilot 3194537 425731
[2026-03-18 09:17:48] 2026-03-18 13:17:47,643 [wrapper] Test setup, not cleaning
[2026-03-18 09:17:48] 2026-03-18 13:17:47,646 [wrapper] apfmon messages muted
[2026-03-18 09:17:48] 2026-03-18 13:17:47,649 [wrapper] ==== wrapper stdout END ====
[2026-03-18 09:17:48] 2026-03-18 13:17:47,652 [wrapper] ==== wrapper stderr END ====
[2026-03-18 09:17:48]  *** Error codes and diagnostics ***
[2026-03-18 09:17:48]     "exeErrorCode": 0,
[2026-03-18 09:17:48]     "exeErrorDiag": "",
[2026-03-18 09:17:48]     "pilotErrorCode": 0,
[2026-03-18 09:17:48]     "pilotErrorDiag": "",
[2026-03-18 09:17:48]  *** Listing of results directory ***
[2026-03-18 09:17:48] total 671368
[2026-03-18 09:17:48] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-18 09:17:48] -rw-r--r--. 1 boincer umatlas    585013 Mar 17 08:21 pilot3.tar.gz
[2026-03-18 09:17:48] -rwx------. 1 boincer umatlas     36322 Mar 17 08:23 runpilot2-wrapper.sh
[2026-03-18 09:17:48] -rw-r--r--. 1 boincer umatlas      5111 Mar 17 08:24 queuedata.json
[2026-03-18 09:17:48] -rw-r--r--. 1 boincer umatlas       100 Mar 17 16:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 09:17:48] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 17 16:41 run_atlas
[2026-03-18 09:17:48] -rw-r--r--. 1 boincer umatlas       105 Mar 17 16:41 job.xml
[2026-03-18 09:17:48] -rw-r--r--. 3 boincer umatlas 229984117 Mar 17 16:41 EVNT.49133980._000004.pool.root.1
[2026-03-18 09:17:48] -rw-r--r--. 3 boincer umatlas 229984117 Mar 17 16:41 ATLAS.root_0
[2026-03-18 09:17:48] -rw-r--r--. 2 boincer umatlas     15845 Mar 17 16:41 start_atlas.sh
[2026-03-18 09:17:48] drwxrwx--x. 2 boincer umatlas      4096 Mar 17 16:41 shared
[2026-03-18 09:17:48] -rw-r--r--. 2 boincer umatlas    597560 Mar 17 16:41 input.tar.gz
[2026-03-18 09:17:48] -rw-r--r--. 1 boincer umatlas         0 Mar 17 16:41 boinc_lockfile
[2026-03-18 09:17:48] -rw-r--r--. 1 boincer umatlas      2700 Mar 17 21:10 pandaJob.out
[2026-03-18 09:17:48] -rw-------. 1 boincer umatlas        57 Mar 17 21:10 setup.sh.local
[2026-03-18 09:17:48] -rw-------. 1 boincer umatlas   1011515 Mar 17 21:10 agis_schedconf.cvmfs.json
[2026-03-18 09:17:48] -rw-------. 1 boincer umatlas       428 Mar 17 21:10 workernode_map.json
[2026-03-18 09:17:48] -rw-------. 1 boincer umatlas 211826805 Mar 18 09:11 HITS.49180840._000088.pool.root.1
[2026-03-18 09:17:48] -rw-r--r--. 1 boincer umatlas       532 Mar 18 09:11 boinc_task_state.xml
[2026-03-18 09:17:48] -rw-r--r--. 1 boincer umatlas      6947 Mar 18 09:11 init_data.xml
[2026-03-18 09:17:48] -rw-------. 1 boincer umatlas        96 Mar 18 09:16 pilot_heartbeat.json
[2026-03-18 09:17:48] -rw-------. 1 boincer umatlas      1056 Mar 18 09:17 memory_monitor_summary.json
[2026-03-18 09:17:48] -rw-------. 1 boincer umatlas   1511579 Mar 18 09:17 agis_ddmendpoints.agis.ALL.json
[2026-03-18 09:17:48] -rw-------. 1 boincer umatlas    802738 Mar 18 09:17 log.49180840._000088.job.log.tgz.1
[2026-03-18 09:17:48] -rw-------. 1 boincer umatlas      6359 Mar 18 09:17 heartbeat.json
[2026-03-18 09:17:48] -rw-r--r--. 1 boincer umatlas      8192 Mar 18 09:17 boinc_mmap_file
[2026-03-18 09:17:48] -rw-r--r--. 1 boincer umatlas        29 Mar 18 09:17 wrapper_checkpoint.txt
[2026-03-18 09:17:48] -rw-------. 1 boincer umatlas       822 Mar 18 09:17 pilotlog.txt
[2026-03-18 09:17:48] -rw-------. 1 boincer umatlas   5065285 Mar 18 09:17 log.49180840._000088.job.log.1
[2026-03-18 09:17:48] -rw-------. 1 boincer umatlas       357 Mar 18 09:17 output.list
[2026-03-18 09:17:48] -rw-r--r--. 1 boincer umatlas       620 Mar 18 09:17 runtime_log
[2026-03-18 09:17:48] -rw-------. 1 boincer umatlas   5888000 Mar 18 09:17 result.tar.gz
[2026-03-18 09:17:48] -rw-r--r--. 1 boincer umatlas      9422 Mar 18 09:17 runtime_log.err
[2026-03-18 09:17:48] -rw-------. 1 boincer umatlas       787 Mar 18 09:17 jX9MDmPdiM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm5H0LDmBNbGym.diag
[2026-03-18 09:17:48] -rw-r--r--. 1 boincer umatlas     23418 Mar 18 09:17 stderr.txt
[2026-03-18 09:17:48] HITS file was successfully produced:
[2026-03-18 09:17:48] -rw-------. 1 boincer umatlas 211826805 Mar 18 09:11 shared/HITS.pool.root.1
[2026-03-18 09:17:48]  *** Contents of shared directory: ***
[2026-03-18 09:17:48] total 437820
[2026-03-18 09:17:48] -rw-r--r--. 3 boincer umatlas 229984117 Mar 17 16:41 ATLAS.root_0
[2026-03-18 09:17:48] -rw-r--r--. 2 boincer umatlas     15845 Mar 17 16:41 start_atlas.sh
[2026-03-18 09:17:48] -rw-r--r--. 2 boincer umatlas    597560 Mar 17 16:41 input.tar.gz
[2026-03-18 09:17:48] -rw-------. 1 boincer umatlas 211826805 Mar 18 09:11 HITS.pool.root.1
[2026-03-18 09:17:48] -rw-------. 1 boincer umatlas   5888000 Mar 18 09:17 result.tar.gz
09:17:49 (404618): run_atlas exited; CPU time 68776.447854
09:17:49 (404618): called boinc_finish(0)

</stderr_txt>
]]>

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