Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:10:33 (9728): wrapper (7.7.26015): starting
23:10:33 (9728): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 23:10:33] Arguments: --nthreads 8
[2026-03-17 23:10:33] Threads: 8
[2026-03-17 23:10:33] Checking for CVMFS
[2026-03-17 23:10:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 23:10:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 23:10:33] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 23:10:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 23:10:33] 2.11.0.0 6706 22043 76900 157388 3 188 2204689 4096000 1834 130560 0 5246383 99.860 1372785 269 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-17 23:10:33] CVMFS is ok
[2026-03-17 23:10:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 23:10:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 23:10:33] Further information can be found at the LHC@home message board.
[2026-03-17 23:10:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 23:10:33] Checking for apptainer binary...
[2026-03-17 23:10:33] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-17 23:10:33] apptainer is not installed, using version from CVMFS
[2026-03-17 23:10:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 23:10:33] WARNING: Environment variable TMPDIR already has value [/tmp/job_11331197/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node061
[2026-03-17 23:10:33] apptainer works
[2026-03-17 23:10:33] Set ATHENA_PROC_NUMBER=8
[2026-03-17 23:10:33] Set ATHENA_CORE_NUMBER=8
[2026-03-17 23:10:33] Starting ATLAS job with PandaID=7057208228
[2026-03-17 23:10:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11331197/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 01:09:00]  *** The last 200 lines of the pilot log: ***
[2026-03-18 01:09:00] 2026-03-18 00:08:10,257 | INFO     | total number of processed events: 400 (read)
[2026-03-18 01:09:00] 2026-03-18 00:08:10,276 | INFO     | using path: /tmp/job_11331197/atlas/pilot/slots/0/PanDA_Pilot-7057208228/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 01:09:00] 2026-03-18 00:08:10,276 | INFO     | extracted standard info from prmon json
[2026-03-18 01:09:00] 2026-03-18 00:08:10,276 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 01:09:00] 2026-03-18 00:08:10,276 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 01:09:00] 2026-03-18 00:08:10,276 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 01:09:00] 2026-03-18 00:08:10,276 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 01:09:00] 2026-03-18 00:08:10,277 | INFO     | fitting pss+swap vs Time
[2026-03-18 01:09:00] 2026-03-18 00:08:10,277 | INFO     | sum of square deviations: 483971865.0
[2026-03-18 01:09:00] 2026-03-18 00:08:10,278 | INFO     | sum of deviations: 7827631812.999999
[2026-03-18 01:09:00] 2026-03-18 00:08:10,278 | INFO     | mean x: 1773788965.5
[2026-03-18 01:09:00] 2026-03-18 00:08:10,278 | INFO     | mean y: 2485198.0862068967
[2026-03-18 01:09:00] 2026-03-18 00:08:10,278 | INFO     | intersect: -28686304254.367104
[2026-03-18 01:09:00] 2026-03-18 00:08:10,278 | INFO     | chi2: 1.7829694022583493
[2026-03-18 01:09:00] 2026-03-18 00:08:10,278 | INFO     | sum of square deviations: 424045160.0
[2026-03-18 01:09:00] 2026-03-18 00:08:10,278 | INFO     | sum of deviations: 14429302645.000002
[2026-03-18 01:09:00] 2026-03-18 00:08:10,278 | INFO     | mean x: 1773788813.0
[2026-03-18 01:09:00] 2026-03-18 00:08:10,279 | INFO     | mean y: 2501348.954954955
[2026-03-18 01:09:00] 2026-03-18 00:08:10,279 | INFO     | intersect: -60355540731.02613
[2026-03-18 01:09:00] 2026-03-18 00:08:10,279 | INFO     | chi2: 1.0977564065638061
[2026-03-18 01:09:00] 2026-03-18 00:08:10,279 | INFO     | current chi2=1.0977564065638061 (change=38.4310013860382 %)
[2026-03-18 01:09:00] 2026-03-18 00:08:10,279 | INFO     | sum of square deviations: 369281342.5
[2026-03-18 01:09:00] 2026-03-18 00:08:10,279 | INFO     | sum of deviations: 13584897792.5
[2026-03-18 01:09:00] 2026-03-18 00:08:10,279 | INFO     | mean x: 1773788660.5
[2026-03-18 01:09:00] 2026-03-18 00:08:10,279 | INFO     | mean y: 2498996.0094339624
[2026-03-18 01:09:00] 2026-03-18 00:08:10,279 | INFO     | intersect: -65250561164.72149
[2026-03-18 01:09:00] 2026-03-18 00:08:10,279 | INFO     | chi2: 1.0992428294285146
[2026-03-18 01:09:00] 2026-03-18 00:08:10,279 | INFO     | current chi2=1.0992428294285146 (change=-0.13540552856906163 %)
[2026-03-18 01:09:00] 2026-03-18 00:08:10,279 | INFO     | right removable region: 105
[2026-03-18 01:09:00] 2026-03-18 00:08:10,280 | INFO     | sum of square deviations: 424045160.0
[2026-03-18 01:09:00] 2026-03-18 00:08:10,280 | INFO     | sum of deviations: -4141551263.000001
[2026-03-18 01:09:00] 2026-03-18 00:08:10,280 | INFO     | mean x: 1773789118.0
[2026-03-18 01:09:00] 2026-03-18 00:08:10,280 | INFO     | mean y: 2514822.7117117117
[2026-03-18 01:09:00] 2026-03-18 00:08:10,280 | INFO     | intersect: 17326703977.349293
[2026-03-18 01:09:00] 2026-03-18 00:08:10,280 | INFO     | chi2: 0.7096686368505312
[2026-03-18 01:09:00] 2026-03-18 00:08:10,280 | INFO     | current chi2=0.7096686368505312 (change=60.19737433790794 %)
[2026-03-18 01:09:00] 2026-03-18 00:08:10,280 | INFO     | sum of square deviations: 369281342.5
[2026-03-18 01:09:00] 2026-03-18 00:08:10,280 | INFO     | sum of deviations: -4500027248.5
[2026-03-18 01:09:00] 2026-03-18 00:08:10,280 | INFO     | mean x: 1773789270.5
[2026-03-18 01:09:00] 2026-03-18 00:08:10,280 | INFO     | mean y: 2515810.952830189
[2026-03-18 01:09:00] 2026-03-18 00:08:10,281 | INFO     | intersect: 21617742825.426052
[2026-03-18 01:09:00] 2026-03-18 00:08:10,281 | INFO     | chi2: 0.7098705466653419
[2026-03-18 01:09:00] 2026-03-18 00:08:10,281 | INFO     | current chi2=0.7098705466653419 (change=-0.02845128054507005 %)
[2026-03-18 01:09:00] 2026-03-18 00:08:10,281 | INFO     | left removable region: 20
[2026-03-18 01:09:00] 2026-03-18 00:08:10,281 | INFO     | sum of square deviations: 190403570.0
[2026-03-18 01:09:00] 2026-03-18 00:08:10,281 | INFO     | sum of deviations: 1329427351.0000002
[2026-03-18 01:09:00] 2026-03-18 00:08:10,281 | INFO     | mean x: 1773789240.0
[2026-03-18 01:09:00] 2026-03-18 00:08:10,281 | INFO     | mean y: 2535748.5411764705
[2026-03-18 01:09:00] 2026-03-18 00:08:10,281 | INFO     | intersect: -12382336712.44001
[2026-03-18 01:09:00] 2026-03-18 00:08:10,281 | INFO     | chi2: 0.00016381448696712374
[2026-03-18 01:09:00] 2026-03-18 00:08:10,281 | INFO     | current memory leak: 6.98 B/s (using 85 data points, chi2=0.00)
[2026-03-18 01:09:00] 2026-03-18 00:08:10,281 | INFO     | could have reported an average CPU frequency of 2608 MHz (7 samples)
[2026-03-18 01:09:00] 2026-03-18 00:08:10,281 | INFO     | ..............................
[2026-03-18 01:09:00] 2026-03-18 00:08:10,282 | INFO     | . Timing measurements:
[2026-03-18 01:09:00] 2026-03-18 00:08:10,282 | INFO     | . get job = 0 s
[2026-03-18 01:09:00] 2026-03-18 00:08:10,282 | INFO     | . initial setup = 2 s
[2026-03-18 01:09:00] 2026-03-18 00:08:10,282 | INFO     | . payload setup = 2 s
[2026-03-18 01:09:00] 2026-03-18 00:08:10,282 | INFO     | . stage-in = 0 s
[2026-03-18 01:09:00] 2026-03-18 00:08:10,282 | INFO     | . payload execution = 7026 s
[2026-03-18 01:09:00] 2026-03-18 00:08:10,282 | INFO     | . stage-out = 0 s
[2026-03-18 01:09:00] 2026-03-18 00:08:10,282 | INFO     | . log creation = 0 s
[2026-03-18 01:09:00] 2026-03-18 00:08:10,282 | INFO     | ..............................
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | 
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | job summary report
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | --------------------------------------------------
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | PanDA job id: 7057208228
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | task id: 49176925
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | errors: (none)
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | pilot state: finished 
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | transexitcode: 0
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | exeerrorcode: 0
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | exeerrordiag: 
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | exitcode: 0
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | exitmsg: OK
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | cpuconsumptiontime: 53021 s
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | nevents: 400
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | neventsw: 0
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | pid: 27227
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | pgrp: 27227
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | corecount: 8
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | event service: False
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | sizes: {0: 2280481, 11: 2280481, 7032: 2307907, 7034: 2316935, 7037: 2317185}
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | --------------------------------------------------
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | 
[2026-03-18 01:09:00] 2026-03-18 00:08:10,369 | INFO     | executing command: ls -lF /tmp/job_11331197/atlas/pilot/slots/0
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,378 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 01:09:00] 2026-03-18 00:08:10,379 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,379 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 01:09:00] 2026-03-18 00:08:10,379 | INFO     | job 7057208228 has completed (purged errors)
[2026-03-18 01:09:00] 2026-03-18 00:08:10,379 | INFO     | overall cleanup function is called
[2026-03-18 01:09:00] 2026-03-18 00:08:11,385 | INFO     | --- collectZombieJob: --- 10, [27227]
[2026-03-18 01:09:00] 2026-03-18 00:08:11,385 | INFO     | zombie collector waiting for pid 27227
[2026-03-18 01:09:00] 2026-03-18 00:08:11,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 01:09:00] 2026-03-18 00:08:11,385 | INFO     | collected zombie processes
[2026-03-18 01:09:00] 2026-03-18 00:08:11,385 | INFO     | will attempt to kill all subprocesses of pid=27227
[2026-03-18 01:09:00] 2026-03-18 00:08:11,489 | INFO     | process IDs to be killed: [27227] (in reverse order)
[2026-03-18 01:09:00] 2026-03-18 00:08:11,527 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 01:09:00] 2026-03-18 00:08:11,527 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 01:09:00] 2026-03-18 00:08:11,531 | INFO     | did not find any defunct processes belonging to 27227
[2026-03-18 01:09:00] 2026-03-18 00:08:11,534 | INFO     | did not find any defunct processes belonging to 27227
[2026-03-18 01:09:00] 2026-03-18 00:08:11,535 | INFO     | ready for new job
[2026-03-18 01:09:00] 2026-03-18 00:08:11,535 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 01:09:00] 2026-03-18 00:08:11,535 | INFO     | **************************************
[2026-03-18 01:09:00] 2026-03-18 00:08:11,535 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 01:09:00] 2026-03-18 00:08:11,535 | INFO     | **************************************
[2026-03-18 01:09:00] 2026-03-18 00:08:11,535 | INFO     | 
[2026-03-18 01:09:00] 2026-03-18 00:08:11,549 | INFO     | architecture information:
[2026-03-18 01:09:00] 2026-03-18 00:08:11,549 | INFO     | executing command: cat /etc/os-release
[2026-03-18 01:09:00] 2026-03-18 00:08:11,556 | INFO     | cat /etc/os-release:
[2026-03-18 01:09:00] NAME="CentOS Linux"
[2026-03-18 01:09:00] VERSION="7 (Core)"
[2026-03-18 01:09:00] ID="centos"
[2026-03-18 01:09:00] ID_LIKE="rhel fedora"
[2026-03-18 01:09:00] VERSION_ID="7"
[2026-03-18 01:09:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 01:09:00] ANSI_COLOR="0;31"
[2026-03-18 01:09:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 01:09:00] HOME_URL="https://www.centos.org/"
[2026-03-18 01:09:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 01:09:00] 
[2026-03-18 01:09:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 01:09:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 01:09:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 01:09:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 01:09:00] 
[2026-03-18 01:09:00] 2026-03-18 00:08:11,556 | INFO     | **************************************
[2026-03-18 01:09:00] 2026-03-18 00:08:12,059 | INFO     | executing command: df -mP /tmp/job_11331197/atlas/pilot/slots/0
[2026-03-18 01:09:00] 2026-03-18 00:08:12,063 | INFO     | sufficient remaining disk space (224362758144 B)
[2026-03-18 01:09:00] 2026-03-18 00:08:12,063 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 01:09:00] 2026-03-18 00:08:12,063 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 01:09:00] 2026-03-18 00:08:12,064 | INFO     | update_server=False
[2026-03-18 01:09:00] 2026-03-18 00:08:12,064 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 01:09:00] 2026-03-18 00:08:12,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 01:09:00] 2026-03-18 00:08:12,064 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 01:09:00] 2026-03-18 00:08:12,126 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-18 01:09:00] 2026-03-18 00:08:12,126 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-18 01:09:00] 2026-03-18 00:08:12,126 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 01:09:00] 2026-03-18 00:08:12,126 | INFO     | will abort loop
[2026-03-18 01:09:00] 2026-03-18 00:08:12,267 | INFO     | all job control threads have been joined
[2026-03-18 01:09:00] 2026-03-18 00:08:12,627 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 01:09:00] 2026-03-18 00:08:12,727 | INFO     | all data control threads have been joined
[2026-03-18 01:09:00] 2026-03-18 00:08:13,011 | INFO     | all payload control threads have been joined
[2026-03-18 01:09:00] 2026-03-18 00:08:13,069 | INFO     | [job] retrieve thread has finished
[2026-03-18 01:09:00] 2026-03-18 00:08:13,069 | INFO     | [job] queue monitor thread has finished
[2026-03-18 01:09:00] 2026-03-18 00:08:13,092 | INFO     | [payload] validate_post thread has finished
[2026-03-18 01:09:00] 2026-03-18 00:08:13,131 | INFO     | [job] job monitor thread has finished
[2026-03-18 01:09:00] 2026-03-18 00:08:13,172 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 01:09:00] 2026-03-18 00:08:13,235 | INFO     | [payload] failed_post thread has finished
[2026-03-18 01:09:00] 2026-03-18 00:08:13,272 | INFO     | [job] control thread has finished
[2026-03-18 01:09:00] 2026-03-18 00:08:13,347 | INFO     | [data] copytool_in thread has finished
[2026-03-18 01:09:00] 2026-03-18 00:08:13,732 | INFO     | [data] control thread has finished
[2026-03-18 01:09:00] 2026-03-18 00:08:14,016 | INFO     | [payload] control thread has finished
[2026-03-18 01:09:00] 2026-03-18 00:08:14,147 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 01:09:00] 2026-03-18 00:08:14,429 | INFO     | [job] validate thread has finished
[2026-03-18 01:09:00] 2026-03-18 00:08:14,453 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 01:09:00] 2026-03-18 00:08:14,628 | INFO     | [data] copytool_out thread has finished
[2026-03-18 01:09:00] 2026-03-18 00:08:16,069 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 01:09:00] 2026-03-18 00:08:22,564 | INFO     | job.realtimelogging is not enabled
[2026-03-18 01:09:00] 2026-03-18 00:08:23,569 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 01:09:00] 2026-03-18 00:08:42,293 | INFO     | PID=14493 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 01:09:00] 2026-03-18 00:08:42,293 | INFO     | .. there are 5 such processes running
[2026-03-18 01:09:00] 2026-03-18 00:08:42,294 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 01:09:00] 2026-03-18 00:08:42,294 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 01:09:00] 2026-03-18 00:08:42,294 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 01:09:00] 2026-03-18 00:08:53,889 | INFO     | [monitor] cgroup control has ended
[2026-03-18 01:09:00] 2026-03-18 00:08:55,331 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-18 01:09:00] 2026-03-18 00:08:55,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 01:09:00] 2026-03-18 00:08:55,358 | INFO     | [monitor] control thread has ended
[2026-03-18 01:09:00] 2026-03-18 00:09:00,356 | INFO     | all workflow threads have been joined
[2026-03-18 01:09:00] 2026-03-18 00:09:00,356 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 01:09:00] 2026-03-18 00:09:00,356 | INFO     | traces error code: 0
[2026-03-18 01:09:00] 2026-03-18 00:09:00,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 01:09:00] 2026-03-18 00:09:00,408 [wrapper] ==== pilot stdout END ====
[2026-03-18 01:09:00] 2026-03-18 00:09:00,410 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 01:09:00] 2026-03-18 00:09:00,411 [wrapper] pilotpid: 14493
[2026-03-18 01:09:00] 2026-03-18 00:09:00,412 [wrapper] Pilot exit status: 0
[2026-03-18 01:09:00] 2026-03-18 00:09:00,416 [wrapper] pandaids: 7057208228
[2026-03-18 01:09:00] 2026-03-18 00:09:00,439 [wrapper] cleanup supervisor_pilot  4052 14494
[2026-03-18 01:09:00] 2026-03-18 00:09:00,441 [wrapper] Test setup, not cleaning
[2026-03-18 01:09:00] 2026-03-18 00:09:00,442 [wrapper] apfmon messages muted
[2026-03-18 01:09:00] 2026-03-18 00:09:00,443 [wrapper] ==== wrapper stdout END ====
[2026-03-18 01:09:00] 2026-03-18 00:09:00,444 [wrapper] ==== wrapper stderr END ====
[2026-03-18 01:09:00]  *** Error codes and diagnostics ***
[2026-03-18 01:09:00]     "exeErrorCode": 0,
[2026-03-18 01:09:00]     "exeErrorDiag": "",
[2026-03-18 01:09:00]     "pilotErrorCode": 0,
[2026-03-18 01:09:00]     "pilotErrorDiag": "",
[2026-03-18 01:09:00]  *** Listing of results directory ***
[2026-03-18 01:09:00] total 481740
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user    585013 Mar 17 13:21 pilot3.tar.gz
[2026-03-18 01:09:00] -rwx------ 1 mf493845 unix-user     36322 Mar 17 13:24 runpilot2-wrapper.sh
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user      5111 Mar 17 13:26 queuedata.json
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user       100 Mar 17 22:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 01:09:00] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 17 22:08 run_atlas
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user       105 Mar 17 22:08 job.xml
[2026-03-18 01:09:00] -rw-r--r-- 2 mf493845 unix-user 243962681 Mar 17 23:10 EVNT.49135756._000006.pool.root.1
[2026-03-18 01:09:00] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 17 23:10 start_atlas.sh
[2026-03-18 01:09:00] drwxrwx--x 2 mf493845 unix-user       100 Mar 17 23:10 shared
[2026-03-18 01:09:00] -rw-r--r-- 2 mf493845 unix-user    597565 Mar 17 23:10 input.tar.gz
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user      6390 Mar 17 23:10 init_data.xml
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user         0 Mar 17 23:10 boinc_setup_complete
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user      8192 Mar 17 23:10 boinc_mmap_file
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user         0 Mar 17 23:10 boinc_lockfile
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user      2670 Mar 17 23:10 pandaJob.out
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user   1011333 Mar 17 23:10 agis_schedconf.cvmfs.json
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user   1511579 Mar 17 23:10 agis_ddmendpoints.agis.ALL.json
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user       410 Mar 17 23:10 workernode_map.json
[2026-03-18 01:09:00] drwx------ 5 mf493845 unix-user       440 Mar 17 23:10 pilot3
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user 242612325 Mar 18 01:07 HITS.49176925._000197.pool.root.1
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user      1031 Mar 18 01:08 memory_monitor_summary.json
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user    367786 Mar 18 01:08 log.49176925._000197.job.log.tgz.1
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user      6297 Mar 18 01:08 heartbeat.json
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user        95 Mar 18 01:08 pilot_heartbeat.json
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user      5089 Mar 18 01:09 pilotlog.txt
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user   1036681 Mar 18 01:09 log.49176925._000197.job.log.1
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user       357 Mar 18 01:09 output.list
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user       620 Mar 18 01:09 runtime_log
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user   1423360 Mar 18 01:09 result.tar.gz
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user      9219 Mar 18 01:09 runtime_log.err
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user       644 Mar 18 01:09 AU0KDmteiM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmKLxLDmQFigFm.diag
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user     21469 Mar 18 01:09 stderr.txt
[2026-03-18 01:09:00] HITS file was successfully produced:
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user 242612325 Mar 18 01:07 shared/HITS.pool.root.1
[2026-03-18 01:09:00]  *** Contents of shared directory: ***
[2026-03-18 01:09:00] total 477168
[2026-03-18 01:09:00] -rw-r--r-- 2 mf493845 unix-user 243962681 Mar 17 23:10 ATLAS.root_0
[2026-03-18 01:09:00] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 17 23:10 start_atlas.sh
[2026-03-18 01:09:00] -rw-r--r-- 2 mf493845 unix-user    597565 Mar 17 23:10 input.tar.gz
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user 242612325 Mar 18 01:07 HITS.pool.root.1
[2026-03-18 01:09:00] -rw------- 1 mf493845 unix-user   1423360 Mar 18 01:09 result.tar.gz
01:09:02 (9728): run_atlas exited; CPU time 53121.832253
01:09:02 (9728): called boinc_finish(0)

</stderr_txt>
]]>

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