Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:18:40 (5378): wrapper (7.7.26015): starting
00:18:40 (5378): wrapper: running run_atlas (--nthreads 8)
[2026-03-19 00:18:40] Arguments: --nthreads 8
[2026-03-19 00:18:40] Threads: 8
[2026-03-19 00:18:40] Checking for CVMFS
[2026-03-19 00:18:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 00:18:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 00:18:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 00:18:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 00:18:44] 2.11.2.0 32209 133968 138572 157434 0 58 12864318 25165824 4266 130560 148 43414949 99.819 31850108 1078 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-19 00:18:44] CVMFS is ok
[2026-03-19 00:18:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 00:18:44] Checking for apptainer binary...
[2026-03-19 00:18:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 00:18:44] Running /usr/bin/apptainer --version
[2026-03-19 00:18:44] apptainer version 1.3.2-1.el7
[2026-03-19 00:18:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 00:19:01] cg-vwn500.simple-grid.lan
[2026-03-19 00:19:01] apptainer works
[2026-03-19 00:19:01] Set ATHENA_PROC_NUMBER=8
[2026-03-19 00:19:01] Set ATHENA_CORE_NUMBER=8
[2026-03-19 00:19:01] Starting ATLAS job with PandaID=7057354393
[2026-03-19 00:19:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 08:15:54]  *** The last 200 lines of the pilot log: ***
[2026-03-19 08:15:54] 2026-03-19 07:14:52,456 | INFO     | log transfer has been attempted: DONE
[2026-03-19 08:15:54] 2026-03-19 07:14:52,456 | INFO     | job 7057354393 has finished - writing final server update
[2026-03-19 08:15:54] 2026-03-19 07:14:52,456 | INFO     | total number of processed events: 400 (read)
[2026-03-19 08:15:54] 2026-03-19 07:14:52,458 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7057354393/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 08:15:54] 2026-03-19 07:14:52,459 | INFO     | extracted standard info from prmon json
[2026-03-19 08:15:54] 2026-03-19 07:14:52,459 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 08:15:54] 2026-03-19 07:14:52,459 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 08:15:54] 2026-03-19 07:14:52,459 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 08:15:54] 2026-03-19 07:14:52,459 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 08:15:54] 2026-03-19 07:14:52,472 | INFO     | fitting pss+swap vs Time
[2026-03-19 08:15:54] 2026-03-19 07:14:52,473 | INFO     | sum of square deviations: 29790156694.5
[2026-03-19 08:15:54] 2026-03-19 07:14:52,479 | INFO     | sum of deviations: 139703196617.99997
[2026-03-19 08:15:54] 2026-03-19 07:14:52,479 | INFO     | mean x: 1773890511.5
[2026-03-19 08:15:54] 2026-03-19 07:14:52,479 | INFO     | mean y: 2493921.9737991267
[2026-03-19 08:15:54] 2026-03-19 07:14:52,479 | INFO     | intersect: -8316300015.5096655
[2026-03-19 08:15:54] 2026-03-19 07:14:52,480 | INFO     | chi2: 6.914113296566974
[2026-03-19 08:15:54] 2026-03-19 07:14:52,481 | INFO     | sum of square deviations: 28825106042.0
[2026-03-19 08:15:54] 2026-03-19 07:14:52,487 | INFO     | sum of deviations: 168837733639.00003
[2026-03-19 08:15:54] 2026-03-19 07:14:52,487 | INFO     | mean x: 1773890359.0
[2026-03-19 08:15:54] 2026-03-19 07:14:52,487 | INFO     | mean y: 2498483.0993377483
[2026-03-19 08:15:54] 2026-03-19 07:14:52,487 | INFO     | intersect: -10387736595.350756
[2026-03-19 08:15:54] 2026-03-19 07:14:52,488 | INFO     | chi2: 6.174022559348057
[2026-03-19 08:15:54] 2026-03-19 07:14:52,488 | INFO     | current chi2=6.174022559348057 (change=10.70405857518115 %)
[2026-03-19 08:15:54] 2026-03-19 07:14:52,488 | INFO     | right removable region: 452
[2026-03-19 08:15:54] 2026-03-19 07:14:52,489 | INFO     | sum of square deviations: 28825106042.0
[2026-03-19 08:15:54] 2026-03-19 07:14:52,494 | INFO     | sum of deviations: -24973046504.999985
[2026-03-19 08:15:54] 2026-03-19 07:14:52,495 | INFO     | mean x: 1773890664.0
[2026-03-19 08:15:54] 2026-03-19 07:14:52,495 | INFO     | mean y: 2519935.8918322297
[2026-03-19 08:15:54] 2026-03-19 07:14:52,495 | INFO     | intersect: 1539355706.1509318
[2026-03-19 08:15:54] 2026-03-19 07:14:52,496 | INFO     | chi2: 2.1643229761752436
[2026-03-19 08:15:54] 2026-03-19 07:14:52,496 | INFO     | current chi2=2.1643229761752436 (change=68.697027610903 %)
[2026-03-19 08:15:54] 2026-03-19 07:14:52,496 | INFO     | sum of square deviations: 27881125552.0
[2026-03-19 08:15:54] 2026-03-19 07:14:52,502 | INFO     | sum of deviations: -91168597583.5
[2026-03-19 08:15:54] 2026-03-19 07:14:52,502 | INFO     | mean x: 1773890816.5
[2026-03-19 08:15:54] 2026-03-19 07:14:52,502 | INFO     | mean y: 2530585.301339286
[2026-03-19 08:15:54] 2026-03-19 07:14:52,503 | INFO     | intersect: 5802982855.59908
[2026-03-19 08:15:54] 2026-03-19 07:14:52,503 | INFO     | chi2: 1.042953859932569
[2026-03-19 08:15:54] 2026-03-19 07:14:52,503 | INFO     | current chi2=1.042953859932569 (change=51.81154238931289 %)
[2026-03-19 08:15:54] 2026-03-19 07:14:52,504 | INFO     | sum of square deviations: 26957982662.0
[2026-03-19 08:15:54] 2026-03-19 07:14:52,509 | INFO     | sum of deviations: -98643422506.99997
[2026-03-19 08:15:54] 2026-03-19 07:14:52,510 | INFO     | mean x: 1773890969.0
[2026-03-19 08:15:54] 2026-03-19 07:14:52,510 | INFO     | mean y: 2531819.945823928
[2026-03-19 08:15:54] 2026-03-19 07:14:52,510 | INFO     | intersect: 6493472871.817422
[2026-03-19 08:15:54] 2026-03-19 07:14:52,510 | INFO     | chi2: 1.0255617796509513
[2026-03-19 08:15:54] 2026-03-19 07:14:52,511 | INFO     | current chi2=1.0255617796509513 (change=1.6675790703475717 %)
[2026-03-19 08:15:54] 2026-03-19 07:14:52,511 | INFO     | left removable region: 30
[2026-03-19 08:15:54] 2026-03-19 07:14:52,511 | INFO     | sum of square deviations: 23303080645.5
[2026-03-19 08:15:54] 2026-03-19 07:14:52,516 | INFO     | sum of deviations: -26141884981.500107
[2026-03-19 08:15:54] 2026-03-19 07:14:52,517 | INFO     | mean x: 1773891243.5
[2026-03-19 08:15:54] 2026-03-19 07:14:52,517 | INFO     | mean y: 2529580.6611374407
[2026-03-19 08:15:54] 2026-03-19 07:14:52,517 | INFO     | intersect: 1992518010.2047713
[2026-03-19 08:15:54] 2026-03-19 07:14:52,517 | INFO     | chi2: 0.16553549567786305
[2026-03-19 08:15:54] 2026-03-19 07:14:52,518 | INFO     | current memory leak: -1.12 B/s (using 422 data points, chi2=0.17)
[2026-03-19 08:15:54] 2026-03-19 07:14:52,518 | INFO     | could have reported an average CPU frequency of 2249 MHz (19 samples)
[2026-03-19 08:15:54] 2026-03-19 07:14:52,518 | INFO     | ..............................
[2026-03-19 08:15:54] 2026-03-19 07:14:52,518 | INFO     | . Timing measurements:
[2026-03-19 08:15:54] 2026-03-19 07:14:52,518 | INFO     | . get job = 0 s
[2026-03-19 08:15:54] 2026-03-19 07:14:52,519 | INFO     | . initial setup = 102 s
[2026-03-19 08:15:54] 2026-03-19 07:14:52,519 | INFO     | . payload setup = 217 s
[2026-03-19 08:15:54] 2026-03-19 07:14:52,519 | INFO     | . stage-in = 0 s
[2026-03-19 08:15:54] 2026-03-19 07:14:52,519 | INFO     | . payload execution = 28011 s
[2026-03-19 08:15:54] 2026-03-19 07:14:52,519 | INFO     | . stage-out = 9 s
[2026-03-19 08:15:54] 2026-03-19 07:14:52,519 | INFO     | . log creation = 1 s
[2026-03-19 08:15:54] 2026-03-19 07:14:52,519 | INFO     | ..............................
[2026-03-19 08:15:54] 2026-03-19 07:14:52,637 | INFO     | 
[2026-03-19 08:15:54] 2026-03-19 07:14:52,638 | INFO     | job summary report
[2026-03-19 08:15:54] 2026-03-19 07:14:52,638 | INFO     | --------------------------------------------------
[2026-03-19 08:15:54] 2026-03-19 07:14:52,638 | INFO     | PanDA job id: 7057354393
[2026-03-19 08:15:54] 2026-03-19 07:14:52,638 | INFO     | task id: 49176379
[2026-03-19 08:15:54] 2026-03-19 07:14:52,638 | INFO     | errors: (none)
[2026-03-19 08:15:54] 2026-03-19 07:14:52,638 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 08:15:54] 2026-03-19 07:14:52,638 | INFO     | pilot state: finished 
[2026-03-19 08:15:54] 2026-03-19 07:14:52,638 | INFO     | transexitcode: 0
[2026-03-19 08:15:54] 2026-03-19 07:14:52,638 | INFO     | exeerrorcode: 0
[2026-03-19 08:15:54] 2026-03-19 07:14:52,638 | INFO     | exeerrordiag: 
[2026-03-19 08:15:54] 2026-03-19 07:14:52,638 | INFO     | exitcode: 0
[2026-03-19 08:15:54] 2026-03-19 07:14:52,638 | INFO     | exitmsg: OK
[2026-03-19 08:15:54] 2026-03-19 07:14:52,638 | INFO     | cpuconsumptiontime: 108892 s
[2026-03-19 08:15:54] 2026-03-19 07:14:52,639 | INFO     | nevents: 400
[2026-03-19 08:15:54] 2026-03-19 07:14:52,639 | INFO     | neventsw: 0
[2026-03-19 08:15:54] 2026-03-19 07:14:52,639 | INFO     | pid: 14061
[2026-03-19 08:15:54] 2026-03-19 07:14:52,639 | INFO     | pgrp: 14061
[2026-03-19 08:15:54] 2026-03-19 07:14:52,639 | INFO     | corecount: 8
[2026-03-19 08:15:54] 2026-03-19 07:14:52,639 | INFO     | event service: False
[2026-03-19 08:15:54] 2026-03-19 07:14:52,639 | INFO     | sizes: {0: 2279822, 1: 2280279, 2: 2280367, 12: 2280367, 28232: 2317235, 28233: 2317234, 28242: 2326416, 28244: 2326666}
[2026-03-19 08:15:54] 2026-03-19 07:14:52,639 | INFO     | --------------------------------------------------
[2026-03-19 08:15:54] 2026-03-19 07:14:52,639 | INFO     | 
[2026-03-19 08:15:54] 2026-03-19 07:14:52,639 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-03-19 08:15:54] 2026-03-19 07:14:52,777 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,777 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,777 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,777 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,777 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,777 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,777 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,778 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,778 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,778 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,778 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,778 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,778 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,778 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,778 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,778 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,778 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,778 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 08:15:54] 2026-03-19 07:14:52,778 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,779 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 08:15:54] 2026-03-19 07:14:52,779 | INFO     | job 7057354393 has completed (purged errors)
[2026-03-19 08:15:54] 2026-03-19 07:14:52,779 | INFO     | overall cleanup function is called
[2026-03-19 08:15:54] 2026-03-19 07:14:53,787 | INFO     | --- collectZombieJob: --- 10, [14061]
[2026-03-19 08:15:54] 2026-03-19 07:14:53,788 | INFO     | zombie collector waiting for pid 14061
[2026-03-19 08:15:54] 2026-03-19 07:14:53,788 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 08:15:54] 2026-03-19 07:14:53,788 | INFO     | collected zombie processes
[2026-03-19 08:15:54] 2026-03-19 07:14:53,788 | INFO     | will attempt to kill all subprocesses of pid=14061
[2026-03-19 08:15:54] 2026-03-19 07:14:53,884 | INFO     | process IDs to be killed: [14061] (in reverse order)
[2026-03-19 08:15:54] 2026-03-19 07:14:54,720 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 08:15:54] 2026-03-19 07:14:54,720 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 08:15:54] 2026-03-19 07:14:54,723 | INFO     | did not find any defunct processes belonging to 14061
[2026-03-19 08:15:54] 2026-03-19 07:14:54,725 | INFO     | did not find any defunct processes belonging to 14061
[2026-03-19 08:15:54] 2026-03-19 07:14:54,725 | INFO     | ready for new job
[2026-03-19 08:15:54] 2026-03-19 07:14:54,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 08:15:54] 2026-03-19 07:14:54,728 | INFO     | **************************************
[2026-03-19 08:15:54] 2026-03-19 07:14:54,728 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 08:15:54] 2026-03-19 07:14:54,728 | INFO     | **************************************
[2026-03-19 08:15:54] 2026-03-19 07:14:54,728 | INFO     | 
[2026-03-19 08:15:54] 2026-03-19 07:14:54,729 | INFO     | pilot is running in a VM
[2026-03-19 08:15:54] 2026-03-19 07:14:54,729 | INFO     | architecture information:
[2026-03-19 08:15:54] 2026-03-19 07:14:54,729 | INFO     | executing command: cat /etc/os-release
[2026-03-19 08:15:54] 2026-03-19 07:14:54,977 | INFO     | cat /etc/os-release:
[2026-03-19 08:15:54] NAME="CentOS Linux"
[2026-03-19 08:15:54] VERSION="7 (Core)"
[2026-03-19 08:15:54] ID="centos"
[2026-03-19 08:15:54] ID_LIKE="rhel fedora"
[2026-03-19 08:15:54] VERSION_ID="7"
[2026-03-19 08:15:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 08:15:54] ANSI_COLOR="0;31"
[2026-03-19 08:15:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 08:15:54] HOME_URL="https://www.centos.org/"
[2026-03-19 08:15:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 08:15:54] 
[2026-03-19 08:15:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 08:15:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 08:15:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 08:15:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 08:15:54] 
[2026-03-19 08:15:54] 2026-03-19 07:14:54,977 | INFO     | **************************************
[2026-03-19 08:15:54] 2026-03-19 07:14:55,480 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-03-19 08:15:54] 2026-03-19 07:14:55,676 | INFO     | sufficient remaining disk space (495666069504 B)
[2026-03-19 08:15:54] 2026-03-19 07:14:55,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 08:15:54] 2026-03-19 07:14:55,676 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 08:15:54] 2026-03-19 07:14:55,676 | INFO     | update_server=False
[2026-03-19 08:15:54] 2026-03-19 07:14:55,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 08:15:54] 2026-03-19 07:14:55,964 | INFO     | all data control threads have been joined
[2026-03-19 08:15:54] 2026-03-19 07:14:56,088 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 08:15:54] 2026-03-19 07:14:56,089 | INFO     | aborting loop
[2026-03-19 08:15:54] 2026-03-19 07:14:56,223 | INFO     | all job control threads have been joined
[2026-03-19 08:15:54] 2026-03-19 07:14:56,682 | INFO     | [job] retrieve thread has finished
[2026-03-19 08:15:54] 2026-03-19 07:14:56,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 08:15:54] 2026-03-19 07:14:56,960 | INFO     | [payload] validate_post thread has finished
[2026-03-19 08:15:54] 2026-03-19 07:14:56,969 | INFO     | [data] control thread has finished
[2026-03-19 08:15:54] 2026-03-19 07:14:57,000 | INFO     | all payload control threads have been joined
[2026-03-19 08:15:54] 2026-03-19 07:14:57,018 | INFO     | [payload] failed_post thread has finished
[2026-03-19 08:15:54] 2026-03-19 07:14:57,054 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 08:15:54] 2026-03-19 07:14:57,094 | INFO     | [job] job monitor thread has finished
[2026-03-19 08:15:54] 2026-03-19 07:14:57,214 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 08:15:54] 2026-03-19 07:14:57,222 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 08:15:54] 2026-03-19 07:14:57,229 | INFO     | [job] control thread has finished
[2026-03-19 08:15:54] 2026-03-19 07:14:57,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 08:15:54] 2026-03-19 07:14:57,721 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 08:15:54] 2026-03-19 07:14:58,006 | INFO     | [payload] control thread has finished
[2026-03-19 08:15:54] 2026-03-19 07:14:58,108 | INFO     | [job] validate thread has finished
[2026-03-19 08:15:54] 2026-03-19 07:14:58,131 | INFO     | [data] copytool_in thread has finished
[2026-03-19 08:15:54] 2026-03-19 07:14:58,462 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 08:15:54] 2026-03-19 07:14:58,657 | INFO     | [job] queue monitor thread has finished
[2026-03-19 08:15:54] 2026-03-19 07:14:58,780 | INFO     | [data] copytool_out thread has finished
[2026-03-19 08:15:54] 2026-03-19 07:15:02,472 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 08:15:54] 2026-03-19 07:15:24,765 | INFO     | PID=9464 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-19 08:15:54] 2026-03-19 07:15:24,765 | INFO     | .. there are 9 such processes running
[2026-03-19 08:15:54] 2026-03-19 07:15:24,766 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 08:15:54] 2026-03-19 07:15:24,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 08:15:54] 2026-03-19 07:15:24,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 08:15:54] 2026-03-19 07:15:45,109 | INFO     | [monitor] cgroup control has ended
[2026-03-19 08:15:54] 2026-03-19 07:15:45,712 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140073609307968)>', '<ExcThread(monitor, started 140073009919744)>']
[2026-03-19 08:15:54] 2026-03-19 07:15:45,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 08:15:54] 2026-03-19 07:15:45,892 | INFO     | [monitor] control thread has ended
[2026-03-19 08:15:54] 2026-03-19 07:15:50,738 | INFO     | all workflow threads have been joined
[2026-03-19 08:15:54] 2026-03-19 07:15:50,738 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 08:15:54] 2026-03-19 07:15:50,739 | INFO     | traces error code: 0
[2026-03-19 08:15:54] 2026-03-19 07:15:50,739 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 08:15:54] 2026-03-19 07:15:51,070 [wrapper] ==== pilot stdout END ====
[2026-03-19 08:15:54] 2026-03-19 07:15:51,179 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 08:15:54] 2026-03-19 07:15:51,304 [wrapper] pilotpid: 9464
[2026-03-19 08:15:54] 2026-03-19 07:15:51,400 [wrapper] Pilot exit status: 0
[2026-03-19 08:15:54] 2026-03-19 07:15:51,831 [wrapper] pandaids: 7057354393
[2026-03-19 08:15:54] 2026-03-19 07:15:52,703 [wrapper] cleanup supervisor_pilot  7308 9465
[2026-03-19 08:15:54] 2026-03-19 07:15:52,751 [wrapper] Test setup, not cleaning
[2026-03-19 08:15:54] 2026-03-19 07:15:52,800 [wrapper] apfmon messages muted
[2026-03-19 08:15:54] 2026-03-19 07:15:52,848 [wrapper] ==== wrapper stdout END ====
[2026-03-19 08:15:54] 2026-03-19 07:15:52,899 [wrapper] ==== wrapper stderr END ====
[2026-03-19 08:15:54]  *** Error codes and diagnostics ***
[2026-03-19 08:15:54]     "exeErrorCode": 0,
[2026-03-19 08:15:54]     "exeErrorDiag": "",
[2026-03-19 08:15:54]     "pilotErrorCode": 0,
[2026-03-19 08:15:54]     "pilotErrorDiag": "",
[2026-03-19 08:15:54]  *** Listing of results directory ***
[2026-03-19 08:15:54] total 458296
[2026-03-19 08:15:54] -rw-r--r--. 1 boinc boinc    585013 Mar 17 19:29 pilot3.tar.gz
[2026-03-19 08:15:54] -rw-r--r--. 1 boinc boinc      5111 Mar 17 19:30 queuedata.json
[2026-03-19 08:15:54] -rwx------. 1 boinc boinc     36322 Mar 17 19:30 runpilot2-wrapper.sh
[2026-03-19 08:15:54] -rw-r--r--. 1 boinc boinc       100 Mar 19 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 08:15:54] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 00:18 run_atlas
[2026-03-19 08:15:54] -rw-r--r--. 1 boinc boinc       105 Mar 19 00:18 job.xml
[2026-03-19 08:15:54] -rw-r--r--. 1 boinc boinc      6391 Mar 19 00:18 init_data.xml
[2026-03-19 08:15:54] -rw-r--r--. 2 boinc boinc 238705975 Mar 19 00:18 EVNT.49133746._000010.pool.root.1
[2026-03-19 08:15:54] -rw-r--r--. 2 boinc boinc     15845 Mar 19 00:18 start_atlas.sh
[2026-03-19 08:15:54] drwxrwx--x. 2 boinc boinc        68 Mar 19 00:18 shared
[2026-03-19 08:15:54] -rw-r--r--. 2 boinc boinc    597540 Mar 19 00:18 input.tar.gz
[2026-03-19 08:15:54] -rw-r--r--. 1 boinc boinc         0 Mar 19 00:18 boinc_lockfile
[2026-03-19 08:15:54] -rw-r--r--. 1 boinc boinc      2622 Mar 19 00:19 pandaJob.out
[2026-03-19 08:15:54] -rw-------. 1 boinc boinc       415 Mar 19 00:23 workernode_map.json
[2026-03-19 08:15:54] -rw-------. 1 boinc boinc   1010350 Mar 19 00:23 agis_schedconf.cvmfs.json
[2026-03-19 08:15:54] drwx------. 5 boinc boinc      4096 Mar 19 00:23 pilot3
[2026-03-19 08:15:54] -rw-r--r--. 1 boinc boinc       531 Mar 19 08:13 boinc_task_state.xml
[2026-03-19 08:15:54] -rw-------. 1 boinc boinc 217573842 Mar 19 08:13 HITS.49176379._000204.pool.root.1
[2026-03-19 08:15:54] -rw-------. 1 boinc boinc      1019 Mar 19 08:14 memory_monitor_summary.json
[2026-03-19 08:15:54] -rw-------. 1 boinc boinc   1511579 Mar 19 08:14 agis_ddmendpoints.agis.ALL.json
[2026-03-19 08:15:54] -rw-------. 1 boinc boinc    642954 Mar 19 08:14 log.49176379._000204.job.log.tgz.1
[2026-03-19 08:15:54] -rw-------. 1 boinc boinc      6317 Mar 19 08:14 heartbeat.json
[2026-03-19 08:15:54] -rw-------. 1 boinc boinc        95 Mar 19 08:15 pilot_heartbeat.json
[2026-03-19 08:15:54] -rw-r--r--. 1 boinc boinc      8192 Mar 19 08:15 boinc_mmap_file
[2026-03-19 08:15:54] -rw-r--r--. 1 boinc boinc        29 Mar 19 08:15 wrapper_checkpoint.txt
[2026-03-19 08:15:54] -rw-------. 1 boinc boinc      4879 Mar 19 08:15 pilotlog.txt
[2026-03-19 08:15:54] -rw-------. 1 boinc boinc   3903263 Mar 19 08:15 log.49176379._000204.job.log.1
[2026-03-19 08:15:54] -rw-------. 1 boinc boinc       357 Mar 19 08:15 output.list
[2026-03-19 08:15:54] -rw-r--r--. 1 boinc boinc       620 Mar 19 08:15 runtime_log
[2026-03-19 08:15:54] -rw-------. 1 boinc boinc   4567040 Mar 19 08:15 result.tar.gz
[2026-03-19 08:15:54] -rw-------. 1 boinc boinc       658 Mar 19 08:15 WDHODmrMoM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmpg0LDmSDWHfn.diag
[2026-03-19 08:15:54] -rw-r--r--. 1 boinc boinc      8816 Mar 19 08:15 runtime_log.err
[2026-03-19 08:15:54] -rw-r--r--. 1 boinc boinc     20718 Mar 19 08:15 stderr.txt
[2026-03-19 08:15:54] HITS file was successfully produced:
[2026-03-19 08:15:54] -rw-------. 1 boinc boinc 217573842 Mar 19 08:13 shared/HITS.pool.root.1
[2026-03-19 08:15:54]  *** Contents of shared directory: ***
[2026-03-19 08:15:54] total 450648
[2026-03-19 08:15:54] -rw-r--r--. 2 boinc boinc 238705975 Mar 19 00:18 ATLAS.root_0
[2026-03-19 08:15:54] -rw-r--r--. 2 boinc boinc     15845 Mar 19 00:18 start_atlas.sh
[2026-03-19 08:15:54] -rw-r--r--. 2 boinc boinc    597540 Mar 19 00:18 input.tar.gz
[2026-03-19 08:15:54] -rw-------. 1 boinc boinc 217573842 Mar 19 08:13 HITS.pool.root.1
[2026-03-19 08:15:54] -rw-------. 1 boinc boinc   4567040 Mar 19 08:15 result.tar.gz
08:15:56 (5378): run_atlas exited; CPU time 109279.206138
08:15:56 (5378): called boinc_finish(0)

</stderr_txt>
]]>

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