Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
22:21:19 (940): wrapper (7.7.26015): starting
22:21:19 (940): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 22:21:19] Arguments: --nthreads 8
[2026-03-17 22:21:19] Threads: 8
[2026-03-17 22:21:19] Checking for CVMFS
[2026-03-17 22:21:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 22:21:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 22:21:19] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 22:21:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 22:21:19] 2.11.0.0 4480 225857 95468 157386 3 11 3919069 4096001 2751 130560 12 17567437 99.770 10178747 326 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-17 22:21:19] CVMFS is ok
[2026-03-17 22:21:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 22:21:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 22:21:19] Further information can be found at the LHC@home message board.
[2026-03-17 22:21:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 22:21:19] Checking for apptainer binary...
[2026-03-17 22:21:19] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-17 22:21:19] apptainer is not installed, using version from CVMFS
[2026-03-17 22:21:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 22:21:19] WARNING: Environment variable TMPDIR already has value [/tmp/job_11330532/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node209
[2026-03-17 22:21:19] apptainer works
[2026-03-17 22:21:19] Set ATHENA_PROC_NUMBER=8
[2026-03-17 22:21:19] Set ATHENA_CORE_NUMBER=8
[2026-03-17 22:21:19] Starting ATLAS job with PandaID=7040860141
[2026-03-17 22:21:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11330532/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 23:03:59]  *** The last 200 lines of the pilot log: ***
[2026-03-17 23:03:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-17 23:03:59]  is_altstaged=None
[2026-03-17 23:03:59]  is_tar=False
[2026-03-17 23:03:59]  lfn=log.48955010._018069.job.log.tgz.1
[2026-03-17 23:03:59]  mtime=0
[2026-03-17 23:03:59]  protocol_id=None
[2026-03-17 23:03:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-17 23:03:59]  replicas=None
[2026-03-17 23:03:59]  scope=mc23_13p6TeV
[2026-03-17 23:03:59]  status=None
[2026-03-17 23:03:59]  status_code=0
[2026-03-17 23:03:59]  storage_token=
[2026-03-17 23:03:59]  surl=/tmp/job_11330532/atlas/pilot/slots/0/PanDA_Pilot-7040860141/log.48955010._018069.job.log.tgz.1
[2026-03-17 23:03:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/56/log.48955010._018069.job.log.tgz.1
[2026-03-17 23:03:59]  workdir=None
[2026-03-17 23:03:59] ]
[2026-03-17 23:03:59] 2026-03-17 22:03:23,821 | INFO     | time since job start (2516s) is within the limit (349056.0s)
[2026-03-17 23:03:59] 2026-03-17 22:03:23,821 | INFO     | transferring file log.48955010._018069.job.log.tgz.1 from /tmp/job_11330532/atlas/pilot/slots/0/PanDA_Pilot-7040860141/log.48955010._018069.job.log.tgz.1 to /tmp/j
[2026-03-17 23:03:59] 2026-03-17 22:03:23,821 | INFO     | executing command: /usr/bin/env mv /tmp/job_11330532/atlas/pilot/slots/0/PanDA_Pilot-7040860141/log.48955010._018069.job.log.tgz.1 /tmp/job_11330532/atlas/pilot/sl
[2026-03-17 23:03:59] 2026-03-17 22:03:23,829 | INFO     | adding to output.list: log.48955010._018069.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/56/log.48955010._018069.job.log.tg
[2026-03-17 23:03:59] 2026-03-17 22:03:23,830 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-17 23:03:59] 2026-03-17 22:03:23,830 | INFO     | summary of transferred files:
[2026-03-17 23:03:59] 2026-03-17 22:03:23,830 | INFO     |  -- lfn=log.48955010._018069.job.log.tgz.1, status_code=0, status=transferred
[2026-03-17 23:03:59] 2026-03-17 22:03:23,830 | INFO     | stage-out finished correctly
[2026-03-17 23:03:59] 2026-03-17 22:03:24,393 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-17 23:03:59] 2026-03-17 22:03:25,826 | INFO     | time since job start (2518s) is within the limit (349056.0s)
[2026-03-17 23:03:59] 2026-03-17 22:03:26,970 | INFO     | PID=5076 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-17 23:03:59] 2026-03-17 22:03:27,036 | WARNING  | process 9714 can no longer be monitored (due to stat problems) - aborting
[2026-03-17 23:03:59] 2026-03-17 22:03:27,037 | INFO     | using path: /tmp/job_11330532/atlas/pilot/slots/0/PanDA_Pilot-7040860141/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 23:03:59] 2026-03-17 22:03:27,124 | INFO     | number of running child processes to parent process 9714: 1
[2026-03-17 23:03:59] 2026-03-17 22:03:27,124 | INFO     | maximum number of monitored processes: 6
[2026-03-17 23:03:59] 2026-03-17 22:03:27,276 | INFO     | job 7040860141 has state=finished
[2026-03-17 23:03:59] 2026-03-17 22:03:27,276 | INFO     | preparing for final server update for job 7040860141 in state='finished'
[2026-03-17 23:03:59] 2026-03-17 22:03:27,276 | INFO     | reading metadata from: /tmp/job_11330532/atlas/pilot/slots/0/PanDA_Pilot-7040860141/jobReport.json
[2026-03-17 23:03:59] 2026-03-17 22:03:27,277 | INFO     | added worker_node to metadata from /tmp/job_11330532/atlas/pilot/slots/0/workernode_map.json
[2026-03-17 23:03:59] 2026-03-17 22:03:27,277 | INFO     | this job has now completed (state=finished)
[2026-03-17 23:03:59] 2026-03-17 22:03:27,277 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-17 23:03:59] 2026-03-17 22:03:27,278 | INFO     | log transfer has been attempted: DONE
[2026-03-17 23:03:59] 2026-03-17 22:03:27,278 | INFO     | job 7040860141 has finished - writing final server update
[2026-03-17 23:03:59] 2026-03-17 22:03:27,278 | INFO     | total number of processed events: 400 (read)
[2026-03-17 23:03:59] 2026-03-17 22:03:27,295 | INFO     | using path: /tmp/job_11330532/atlas/pilot/slots/0/PanDA_Pilot-7040860141/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 23:03:59] 2026-03-17 22:03:27,295 | INFO     | extracted standard info from prmon json
[2026-03-17 23:03:59] 2026-03-17 22:03:27,295 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 23:03:59] 2026-03-17 22:03:27,295 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 23:03:59] 2026-03-17 22:03:27,295 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 23:03:59] 2026-03-17 22:03:27,295 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 23:03:59] 2026-03-17 22:03:27,296 | INFO     | fitting pss+swap vs Time
[2026-03-17 23:03:59] 2026-03-17 22:03:27,296 | INFO     | sum of square deviations: 12176972.5
[2026-03-17 23:03:59] 2026-03-17 22:03:27,296 | INFO     | sum of deviations: -1769356849.9999998
[2026-03-17 23:03:59] 2026-03-17 22:03:27,296 | INFO     | mean x: 1773783814.5
[2026-03-17 23:03:59] 2026-03-17 22:03:27,296 | INFO     | mean y: 2630473.2352941176
[2026-03-17 23:03:59] 2026-03-17 22:03:27,296 | INFO     | intersect: 257739645367.92313
[2026-03-17 23:03:59] 2026-03-17 22:03:27,296 | INFO     | chi2: 0.06637231227961886
[2026-03-17 23:03:59] 2026-03-17 22:03:27,296 | INFO     | current memory leak: -145.30 B/s (using 34 data points, chi2=0.07)
[2026-03-17 23:03:59] 2026-03-17 22:03:27,297 | INFO     | could have reported an average CPU frequency of 2738 MHz (5 samples)
[2026-03-17 23:03:59] 2026-03-17 22:03:27,297 | INFO     | ..............................
[2026-03-17 23:03:59] 2026-03-17 22:03:27,297 | INFO     | . Timing measurements:
[2026-03-17 23:03:59] 2026-03-17 22:03:27,297 | INFO     | . get job = 0 s
[2026-03-17 23:03:59] 2026-03-17 22:03:27,297 | INFO     | . initial setup = 3 s
[2026-03-17 23:03:59] 2026-03-17 22:03:27,297 | INFO     | . payload setup = 2 s
[2026-03-17 23:03:59] 2026-03-17 22:03:27,297 | INFO     | . stage-in = 0 s
[2026-03-17 23:03:59] 2026-03-17 22:03:27,297 | INFO     | . payload execution = 2498 s
[2026-03-17 23:03:59] 2026-03-17 22:03:27,297 | INFO     | . stage-out = 0 s
[2026-03-17 23:03:59] 2026-03-17 22:03:27,297 | INFO     | . log creation = 0 s
[2026-03-17 23:03:59] 2026-03-17 22:03:27,297 | INFO     | ..............................
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | 
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | job summary report
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | --------------------------------------------------
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | PanDA job id: 7040860141
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | task id: 48955010
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | errors: (none)
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | pilot state: finished 
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | transexitcode: 0
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | exeerrorcode: 0
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | exeerrordiag: 
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | exitcode: 0
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | exitmsg: OK
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | cpuconsumptiontime: 18371 s
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | nevents: 400
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | neventsw: 0
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | pid: 9714
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | pgrp: 9714
[2026-03-17 23:03:59] 2026-03-17 22:03:27,344 | INFO     | corecount: 8
[2026-03-17 23:03:59] 2026-03-17 22:03:27,345 | INFO     | event service: False
[2026-03-17 23:03:59] 2026-03-17 22:03:27,345 | INFO     | sizes: {0: 2280303, 10: 2280303, 2505: 2305635, 2506: 2314663, 2507: 2314719, 2510: 2314945}
[2026-03-17 23:03:59] 2026-03-17 22:03:27,345 | INFO     | --------------------------------------------------
[2026-03-17 23:03:59] 2026-03-17 22:03:27,345 | INFO     | 
[2026-03-17 23:03:59] 2026-03-17 22:03:27,345 | INFO     | executing command: ls -lF /tmp/job_11330532/atlas/pilot/slots/0
[2026-03-17 23:03:59] 2026-03-17 22:03:27,354 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,354 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,354 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,354 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,354 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,354 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,354 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,354 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,354 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,354 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,354 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,355 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,355 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,355 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 23:03:59] 2026-03-17 22:03:27,355 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,355 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 23:03:59] 2026-03-17 22:03:27,355 | INFO     | job 7040860141 has completed (purged errors)
[2026-03-17 23:03:59] 2026-03-17 22:03:27,355 | INFO     | overall cleanup function is called
[2026-03-17 23:03:59] 2026-03-17 22:03:28,361 | INFO     | --- collectZombieJob: --- 10, [9714]
[2026-03-17 23:03:59] 2026-03-17 22:03:28,361 | INFO     | zombie collector waiting for pid 9714
[2026-03-17 23:03:59] 2026-03-17 22:03:28,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 23:03:59] 2026-03-17 22:03:28,361 | INFO     | collected zombie processes
[2026-03-17 23:03:59] 2026-03-17 22:03:28,361 | INFO     | will attempt to kill all subprocesses of pid=9714
[2026-03-17 23:03:59] 2026-03-17 22:03:28,451 | INFO     | process IDs to be killed: [9714] (in reverse order)
[2026-03-17 23:03:59] 2026-03-17 22:03:28,483 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 23:03:59] 2026-03-17 22:03:28,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 23:03:59] 2026-03-17 22:03:28,486 | INFO     | did not find any defunct processes belonging to 9714
[2026-03-17 23:03:59] 2026-03-17 22:03:28,489 | INFO     | did not find any defunct processes belonging to 9714
[2026-03-17 23:03:59] 2026-03-17 22:03:28,489 | INFO     | ready for new job
[2026-03-17 23:03:59] 2026-03-17 22:03:28,489 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 23:03:59] 2026-03-17 22:03:28,490 | INFO     | **************************************
[2026-03-17 23:03:59] 2026-03-17 22:03:28,490 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-17 23:03:59] 2026-03-17 22:03:28,490 | INFO     | **************************************
[2026-03-17 23:03:59] 2026-03-17 22:03:28,490 | INFO     | 
[2026-03-17 23:03:59] 2026-03-17 22:03:28,505 | INFO     | architecture information:
[2026-03-17 23:03:59] 2026-03-17 22:03:28,505 | INFO     | executing command: cat /etc/os-release
[2026-03-17 23:03:59] 2026-03-17 22:03:28,511 | INFO     | cat /etc/os-release:
[2026-03-17 23:03:59] NAME="CentOS Linux"
[2026-03-17 23:03:59] VERSION="7 (Core)"
[2026-03-17 23:03:59] ID="centos"
[2026-03-17 23:03:59] ID_LIKE="rhel fedora"
[2026-03-17 23:03:59] VERSION_ID="7"
[2026-03-17 23:03:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 23:03:59] ANSI_COLOR="0;31"
[2026-03-17 23:03:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 23:03:59] HOME_URL="https://www.centos.org/"
[2026-03-17 23:03:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 23:03:59] 
[2026-03-17 23:03:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 23:03:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 23:03:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 23:03:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 23:03:59] 
[2026-03-17 23:03:59] 2026-03-17 22:03:28,511 | INFO     | **************************************
[2026-03-17 23:03:59] 2026-03-17 22:03:29,013 | INFO     | executing command: df -mP /tmp/job_11330532/atlas/pilot/slots/0
[2026-03-17 23:03:59] 2026-03-17 22:03:29,019 | INFO     | sufficient remaining disk space (224554647552 B)
[2026-03-17 23:03:59] 2026-03-17 22:03:29,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 23:03:59] 2026-03-17 22:03:29,019 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 23:03:59] 2026-03-17 22:03:29,019 | INFO     | update_server=False
[2026-03-17 23:03:59] 2026-03-17 22:03:29,019 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 23:03:59] 2026-03-17 22:03:29,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 23:03:59] 2026-03-17 22:03:29,020 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 23:03:59] 2026-03-17 22:03:29,020 | INFO     | aborting loop
[2026-03-17 23:03:59] 2026-03-17 22:03:29,185 | INFO     | all payload control threads have been joined
[2026-03-17 23:03:59] 2026-03-17 22:03:29,238 | INFO     | all data control threads have been joined
[2026-03-17 23:03:59] 2026-03-17 22:03:29,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 23:03:59] 2026-03-17 22:03:30,025 | INFO     | [job] retrieve thread has finished
[2026-03-17 23:03:59] 2026-03-17 22:03:30,025 | INFO     | [job] queue monitor thread has finished
[2026-03-17 23:03:59] 2026-03-17 22:03:30,025 | INFO     | [job] job monitor thread has finished
[2026-03-17 23:03:59] 2026-03-17 22:03:30,041 | INFO     | all job control threads have been joined
[2026-03-17 23:03:59] 2026-03-17 22:03:30,190 | INFO     | [payload] control thread has finished
[2026-03-17 23:03:59] 2026-03-17 22:03:30,229 | INFO     | [payload] validate_post thread has finished
[2026-03-17 23:03:59] 2026-03-17 22:03:30,243 | INFO     | [data] control thread has finished
[2026-03-17 23:03:59] 2026-03-17 22:03:30,444 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 23:03:59] 2026-03-17 22:03:30,688 | INFO     | [monitor] cgroup control has ended
[2026-03-17 23:03:59] 2026-03-17 22:03:30,928 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 23:03:59] 2026-03-17 22:03:31,000 | INFO     | [job] validate thread has finished
[2026-03-17 23:03:59] 2026-03-17 22:03:31,017 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 23:03:59] 2026-03-17 22:03:31,046 | INFO     | [job] control thread has finished
[2026-03-17 23:03:59] 2026-03-17 22:03:31,111 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 23:03:59] 2026-03-17 22:03:31,190 | INFO     | [data] copytool_in thread has finished
[2026-03-17 23:03:59] 2026-03-17 22:03:31,296 | INFO     | [payload] failed_post thread has finished
[2026-03-17 23:03:59] 2026-03-17 22:03:31,393 | INFO     | [data] copytool_out thread has finished
[2026-03-17 23:03:59] 2026-03-17 22:03:34,449 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 23:03:59] 2026-03-17 22:03:39,988 | INFO     | job.realtimelogging is not enabled
[2026-03-17 23:03:59] 2026-03-17 22:03:40,993 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 23:03:59] 2026-03-17 22:03:41,243 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-03-17 23:03:59] 2026-03-17 22:03:46,262 | INFO     | all workflow threads have been joined
[2026-03-17 23:03:59] 2026-03-17 22:03:46,262 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 23:03:59] 2026-03-17 22:03:46,263 | INFO     | traces error code: 0
[2026-03-17 23:03:59] 2026-03-17 22:03:46,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 23:03:59] 2026-03-17 22:03:59,144 | INFO     | PID=5076 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-17 23:03:59] 2026-03-17 22:03:59,145 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 23:03:59] 2026-03-17 22:03:59,145 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 23:03:59] 2026-03-17 22:03:59,145 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 23:03:59] 2026-03-17 22:03:59,145 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 23:03:59] 2026-03-17 22:03:59,145 | INFO     | [monitor] control thread has ended
[2026-03-17 23:03:59] 2026-03-17 22:03:59,194 [wrapper] ==== pilot stdout END ====
[2026-03-17 23:03:59] 2026-03-17 22:03:59,195 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 23:03:59] 2026-03-17 22:03:59,196 [wrapper] pilotpid: 5076
[2026-03-17 23:03:59] 2026-03-17 22:03:59,198 [wrapper] Pilot exit status: 0
[2026-03-17 23:03:59] 2026-03-17 22:03:59,202 [wrapper] pandaids: 7040860141
[2026-03-17 23:03:59] 2026-03-17 22:03:59,221 [wrapper] cleanup supervisor_pilot 21756 5077
[2026-03-17 23:03:59] 2026-03-17 22:03:59,222 [wrapper] Test setup, not cleaning
[2026-03-17 23:03:59] 2026-03-17 22:03:59,223 [wrapper] apfmon messages muted
[2026-03-17 23:03:59] 2026-03-17 22:03:59,224 [wrapper] ==== wrapper stdout END ====
[2026-03-17 23:03:59] 2026-03-17 22:03:59,225 [wrapper] ==== wrapper stderr END ====
[2026-03-17 23:03:59]  *** Error codes and diagnostics ***
[2026-03-17 23:03:59]     "exeErrorCode": 0,
[2026-03-17 23:03:59]     "exeErrorDiag": "",
[2026-03-17 23:03:59]     "pilotErrorCode": 0,
[2026-03-17 23:03:59]     "pilotErrorDiag": "",
[2026-03-17 23:03:59]  *** Listing of results directory ***
[2026-03-17 23:03:59] total 615216
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user    584627 Mar  9 14:02 pilot3.tar.gz
[2026-03-17 23:03:59] -rwx------ 1 mf493845 unix-user     36322 Mar  9 14:03 runpilot2-wrapper.sh
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user      5111 Mar  9 14:04 queuedata.json
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user       100 Mar 17 20:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 23:03:59] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 17 20:28 run_atlas
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user       105 Mar 17 20:28 job.xml
[2026-03-17 23:03:59] -rw-r--r-- 2 mf493845 unix-user 441827370 Mar 17 22:21 EVNT.46701403._001361.pool.root.1
[2026-03-17 23:03:59] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 17 22:21 start_atlas.sh
[2026-03-17 23:03:59] drwxrwx--x 2 mf493845 unix-user       100 Mar 17 22:21 shared
[2026-03-17 23:03:59] -rw-r--r-- 2 mf493845 unix-user    597953 Mar 17 22:21 input.tar.gz
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user      6391 Mar 17 22:21 init_data.xml
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user         0 Mar 17 22:21 boinc_setup_complete
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user      8192 Mar 17 22:21 boinc_mmap_file
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user         0 Mar 17 22:21 boinc_lockfile
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user      2562 Mar 17 22:21 pandaJob.out
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user   1011333 Mar 17 22:21 agis_schedconf.cvmfs.json
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user   1511579 Mar 17 22:21 agis_ddmendpoints.agis.ALL.json
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user       416 Mar 17 22:21 workernode_map.json
[2026-03-17 23:03:59] drwx------ 5 mf493845 unix-user       440 Mar 17 22:21 pilot3
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user 182821111 Mar 17 23:03 HITS.48955010._018069.pool.root.1
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user      1020 Mar 17 23:03 memory_monitor_summary.json
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user    303945 Mar 17 23:03 log.48955010._018069.job.log.tgz.1
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user      6321 Mar 17 23:03 heartbeat.json
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user        95 Mar 17 23:03 pilot_heartbeat.json
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user       744 Mar 17 23:03 pilotlog.txt
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user    402651 Mar 17 23:03 log.48955010._018069.job.log.1
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user       357 Mar 17 23:03 output.list
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user       620 Mar 17 23:03 runtime_log
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user    727040 Mar 17 23:03 result.tar.gz
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user      9219 Mar 17 23:03 runtime_log.err
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user       644 Mar 17 23:03 FpxMDmiRpJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmOZcLDmJgiTxm.diag
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user     22063 Mar 17 23:03 stderr.txt
[2026-03-17 23:03:59] HITS file was successfully produced:
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user 182821111 Mar 17 23:03 shared/HITS.pool.root.1
[2026-03-17 23:03:59]  *** Contents of shared directory: ***
[2026-03-17 23:03:59] total 611328
[2026-03-17 23:03:59] -rw-r--r-- 2 mf493845 unix-user 441827370 Mar 17 22:21 ATLAS.root_0
[2026-03-17 23:03:59] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 17 22:21 start_atlas.sh
[2026-03-17 23:03:59] -rw-r--r-- 2 mf493845 unix-user    597953 Mar 17 22:21 input.tar.gz
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user 182821111 Mar 17 23:03 HITS.pool.root.1
[2026-03-17 23:03:59] -rw------- 1 mf493845 unix-user    727040 Mar 17 23:03 result.tar.gz
23:04:00 (940): run_atlas exited; CPU time 18403.398933
23:04:00 (940): called boinc_finish(0)

</stderr_txt>
]]>

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